ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf96n20 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os03g10510:12003.t00853:unspliced-genomic outer mitochondrial membrane protein porin, putative, expressed| Length = 3763 Score = 51.5 bits (106), Expect(2) = 2e-12 Identities = 22/24 (91%), Positives = 22/24 (91%) Frame = +2 / +2 Query: 137 SAHQGLHLRPEALRLHRQLLRSGK 208 SAHQGLHL PEA RLHRQLLRSGK Sbjct: 365 SAHQGLHL*PEADRLHRQLLRSGK 436 Score = 40.0 bits (81), Expect(2) = 2e-12 Identities = 15/18 (83%), Positives = 15/18 (83%) Frame = +2 / +3 Query: 83 HGHEGTGPLHRHRQEGQG 136 HGHEGT PL RH QEGQG Sbjct: 192 HGHEGTRPLLRHWQEGQG 245 Score = 35.0 bits (70), Expect(2) = 9e-06 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = +3 / +3 Query: 135 DLLTRDYTYDQKLXXXXXXXXXXXRIP 215 DLLT+DYTYDQKL R+P Sbjct: 363 DLLTKDYTYDQKLTVSTVSSSGVVRVP 443 Score = 33.6 bits (67), Expect(2) = 9e-06 Identities = 12/14 (85%), Positives = 14/14 (100%) Frame = +3 / +1 Query: 93 KGPGLFTDIGKKAK 134 KGPGLF+DIGK+AK Sbjct: 202 KGPGLFSDIGKRAK 243 Score = 49.6 bits (102), Expect = 2e-05 Identities = 15/18 (83%), Positives = 16/18 (88%) Frame = -1 / -1 Query: 135 PWPSCRCR*RGPVPSWPW 82 PWPSC+CR RG VPSWPW Sbjct: 244 PWPSCQCRRRGRVPSWPW 191 Score = 35.9 bits (72), Expect = 0.24 Identities = 14/16 (87%), Positives = 14/16 (87%) Frame = -3 / -3 Query: 130 AFLPMSVKRPGPFMAM 83 A LPMS KRPGPFMAM Sbjct: 239 ALLPMSEKRPGPFMAM 192
>LOC_Os02g21310:12002.t01921:unspliced-genomic expressed protein| Length = 1554 Score = 32.2 bits (64), Expect(2) = 0.087 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +2 / +3 Query: 164 PEALRLHRQLLRSGKDPVPLPR 229 P LR HRQ+LR+G P+P R Sbjct: 1167 PVPLRRHRQMLRAGHSPLPAAR 1232 Score = 22.6 bits (43), Expect(2) = 0.087 Identities = 7/22 (31%), Positives = 14/22 (63%) Frame = +1 / +1 Query: 238 DASAVASFAVGPYDLVTLRWFL 303 D+S F + PY+ ++ +WF+ Sbjct: 1243 DSSPWTWFYLPPYEALSRKWFM 1308
>LOC_Os07g34910:12007.t03166:unspliced-genomic aspartic proteinase nepenthesin-1 precursor, putative| Length = 540 Score = 35.4 bits (71), Expect = 0.32 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = +3 / +2 Query: 321 WVPHCCTSSSTPVCSESPRL 380 W CCTSS TP C SPR+ Sbjct: 467 WTSTCCTSSRTPCCPCSPRI 526
>LOC_Os02g43950:12002.t03980:unspliced-genomic expressed protein| Length = 908 Score = 35.0 bits (70), Expect = 0.45 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +2 / -1 Query: 407 CGWRPCFVPLVCAGCLV 457 C +RPCF+P C CLV Sbjct: 872 CSFRPCFIPFFCLDCLV 822
>LOC_Os06g35300:12006.t03227:unspliced-genomic exopolygalacturonase precursor, putative| Length = 1079 Score = 34.5 bits (69), Expect = 0.61 Identities = 15/36 (41%), Positives = 16/36 (44%) Frame = +2 / +2 Query: 83 HGHEGTGPLHRHRQEGQGSAHQGLHLRPEALRLHRQ 190 HGH LH HR +G H HLRP RQ Sbjct: 632 HGHRHRR*LHLHRPRHRGHQHLRRHLRPRLRHQRRQ 739
>LOC_Os01g61970:12001.t05573:unspliced-genomic protein GPR108 precursor, putative, expressed| Length = 2155 Score = 34.1 bits (68), Expect = 0.84 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -3 / +2 Query: 433 GHKARPPSAFKTLTSIPNNRGDSEQTGVLE 344 G +ARPP + S P +RG +Q GVL+ Sbjct: 104 GRRARPPPPHRRRRSAPPSRGGGDQAGVLQ 193
>LOC_Os10g34380:12010.t02736:unspliced-genomic FF domain containing protein, expressed| Length = 10660 Score = 26.7 bits (52), Expect(2) = 1.5 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +2 / +2 Query: 191 LLRSGKDPVPLPRLDSMPVLSRRL 262 ++R + P PLP L PVL RRL Sbjct: 230 IVRWRETPRPLPLLPPAPVLRRRL 301 Score = 23.5 bits (45), Expect(2) = 1.5 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = +2 / +3 Query: 83 HGHEGTGPLHRHRQEGQGSA 142 HG G G L R + G GSA Sbjct: 90 HGDAGDGRLRRDQPGGGGSA 149
>LOC_Os06g28194:12006.t02522:unspliced-genomic phosphoglucomutase/phosphomannomutase family protein, putative,| expressed Length = 21531 Score = 33.1 bits (66), Expect = 1.6 Identities = 15/49 (30%), Positives = 20/49 (40%) Frame = +2 / +3 Query: 83 HGHEGTGPLHRHRQEGQGSAHQGLHLRPEALRLHRQLLRSGKDPVPLPR 229 H H + G+ H G H R + R H G+ P+PLPR Sbjct: 7323 HQRRSAHRAHVRHRAGRAPRHDGGHGRADQRRAHPLHPGQGRPPLPLPR 7469
>LOC_Os04g46150:12004.t04147:unspliced-genomic transposon protein, putative, unclassified| Length = 930 Score = 33.1 bits (66), Expect = 1.6 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +2 / -2 Query: 377 VVGY*C*CFECGWRPCFVPLVCAGC 451 +VG C CF C +PC +P CA C Sbjct: 368 IVGPTCACFCCCCQPCLLPPACALC 294
>LOC_Os01g16200:12001.t01470:unspliced-genomic protein Z, putative| Length = 1272 Score = 27.6 bits (54), Expect(2) = 1.7 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = +3 / +2 Query: 288 PPMVPPWL*VDWVPHCCTSSSTP 356 PP PPWL* HC +S+P Sbjct: 1118 PPPPPPWL*CKRGAHCRRWTSSP 1186 Score = 22.6 bits (43), Expect(2) = 1.7 Identities = 9/25 (36%), Positives = 12/25 (48%) Frame = +2 / +3 Query: 116 HRQEGQGSAHQGLHLRPEALRLHRQ 190 HR+ H+G R RLHR+ Sbjct: 1062 HRRSVSSGHHRGGRARHRGRRLHRR 1136
>LOC_Os01g51770:12001.t04607:unspliced-genomic outer mitochondrial membrane protein porin, putative, expressed| Length = 3180 Score = 26.7 bits (52), Expect(3) = 2.1 Identities = 9/13 (69%), Positives = 12/13 (92%) Frame = +3 / +3 Query: 96 GPGLFTDIGKKAK 134 GPGL+ +IGKKA+ Sbjct: 246 GPGLYFEIGKKAR 284 Score = 23.1 bits (44), Expect(3) = 2.1 Identities = 6/12 (50%), Positives = 8/12 (66%) Frame = +1 / +2 Query: 421 VLCALSMCWLLG 456 V+C +CWL G Sbjct: 632 VMCVSELCWLAG 667 Score = 22.1 bits (42), Expect(3) = 2.1 Identities = 7/11 (63%), Positives = 8/11 (72%) Frame = +2 / +1 Query: 464 CGVRISL*YPC 496 C V +SL YPC Sbjct: 2515 CNVAVSLLYPC 2547
>LOC_Os06g07600:12006.t00643:unspliced-genomic alkaline alpha galactosidase 2, putative, expressed| Length = 3313 Score = 26.3 bits (51), Expect(2) = 2.2 Identities = 8/16 (50%), Positives = 10/16 (62%) Frame = +2 / -2 Query: 398 CFECGWRPCFVPLVCA 445 C CG P F P++CA Sbjct: 663 CVSCGTSPPFSPILCA 616 Score = 23.5 bits (45), Expect(2) = 2.2 Identities = 7/10 (70%), Positives = 8/10 (80%) Frame = +3 / -2 Query: 279 SSNPPMVPPW 308 SS+PP PPW Sbjct: 795 SSSPPAPPPW 766
>LOC_Os02g21230:12002.t01913:unspliced-genomic F-box domain containing protein, expressed| Length = 1925 Score = 29.9 bits (59), Expect(2) = 2.2 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = +2 / +2 Query: 173 LRLHRQLLRSGKDPVPLPR 229 LR HRQ+LR+G P+P R Sbjct: 1142 LRRHRQMLRAGNRPLPTAR 1198 Score = 23.1 bits (44), Expect(2) = 2.2 Identities = 9/20 (45%), Positives = 11/20 (55%) Frame = +2 / +2 Query: 104 PLHRHRQEGQGSAHQGLHLR 163 P H R+ G G A QG+ R Sbjct: 35 PSHGQREHGVGGAPQGMPRR 94
>LOC_Os06g40890:12006.t03784:unspliced-genomic exopolygalacturonase precursor, putative, expressed| Length = 2054 Score = 32.7 bits (65), Expect = 2.2 Identities = 14/36 (38%), Positives = 15/36 (41%) Frame = +2 / +2 Query: 83 HGHEGTGPLHRHRQEGQGSAHQGLHLRPEALRLHRQ 190 H H LH HR + H HLRP HRQ Sbjct: 1310 HHHRHRRRLHLHRPRHRRRQHHRRHLRPRPRHQHRQ 1417
>LOC_Os01g09260:12001.t00804:unspliced-genomic cytokinin dehydrogenase 1 precursor, putative, expressed| Length = 2479 Score = 32.7 bits (65), Expect = 2.2 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = +2 / -3 Query: 86 GHEGTGPLHRHRQEGQGSAHQGLHLRPEALR 178 G E G L RH + G H+ LH+ P +R Sbjct: 1703 GEEPAGALERHGEAAAGKVHRALHVAPWPVR 1611
>LOC_Os03g14050:12003.t01197:unspliced-genomic thaumatin-like protein 1 precursor, putative, expressed| Length = 3224 Score = 29.9 bits (59), Expect(2) = 2.5 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +2 / +3 Query: 191 LLRSGKDPVPLPRLDSMPVLSRRLPS 268 L R ++P LP +D +PVL R+PS Sbjct: 1149 LQRRVREPEHLPAVDLLPVLQERVPS 1226 Score = 23.5 bits (45), Expect(2) = 2.5 Identities = 9/27 (33%), Positives = 13/27 (48%) Frame = +2 / +3 Query: 104 PLHRHRQEGQGSAHQGLHLRPEALRLH 184 P H HR G+G G R + ++H Sbjct: 918 PAHDHRAAGRGRRSAGRKWRRQRRQVH 998
>LOC_Os02g54100:12002.t04989:unspliced-genomic expressed protein| Length = 4313 Score = 32.2 bits (64), Expect = 3.0 Identities = 15/31 (48%), Positives = 17/31 (54%) Frame = +2 / -2 Query: 176 RLHRQLLRSGKDPVPLPRLDSMPVLSRRLPS 268 R R+ RS PVPLPR S L RR P+ Sbjct: 3064 RRRRRTRRSSPSPVPLPRRSSSRSLPRRRPT 2972
>LOC_Os01g36610:12001.t03209:unspliced-genomic salt-inducible protein-like, putative| Length = 1791 Score = 32.2 bits (64), Expect = 3.0 Identities = 19/60 (31%), Positives = 26/60 (43%) Frame = +2 / +3 Query: 101 GPLHRHRQEGQGSAHQGLHLRPEALRLHRQLLRSGKDPVPLPRLDSMPVLSRRLPSGRTI 280 GP HR R+ +G AH+G L L R+ R PLP P+ R +G + Sbjct: 90 GPPHRLRRPRRGEAHRG*ALPAAPLPRQRRAHRRRPPRRPLPPAPHPPLPPRAAAAGAAL 269
>LOC_Os06g17090:12006.t01581:unspliced-genomic UDP-glycosyltransferase 89B2, putative| Length = 1107 Score = 32.2 bits (64), Expect = 3.0 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -1 / -3 Query: 294 SEGY*IVRPDGKRRDSTGIESSRGSGTGS 208 S GY + PD +RR E+SRG+G+G+ Sbjct: 550 SPGYRRI*PDSRRRSRLQAEASRGTGSGA 464
>LOC_Os04g31924:12004.t02872:unspliced-genomic nodulin-like protein, putative, expressed| Length = 4510 Score = 32.2 bits (64), Expect = 3.0 Identities = 12/28 (42%), Positives = 13/28 (46%) Frame = -1 / -2 Query: 447 PAHTKGTKHGLHPHSKH*HQYPTTAEIP 364 P HGL PH +H HQ P E P Sbjct: 813 PEEVPDAGHGLQPHCRHEHQPPVRRERP 730
>LOC_Os06g42020:12006.t03894:unspliced-genomic CSLA9 - cellulose synthase-like family A, expressed| Length = 4685 Score = 31.8 bits (63), Expect = 4.1 Identities = 15/34 (44%), Positives = 16/34 (47%) Frame = +2 / -2 Query: 89 HEGTGPLHRHRQEGQGSAHQGLHLRPEALRLHRQ 190 H G G RH Q Q H+ LHL P L RQ Sbjct: 235 HHGHGEARRHGQPQQRHHHRRLHLLPHRRDLLRQ 134
>LOC_Os03g07994:12003.t005756:unspliced-genomic expressed protein| Length = 2788 Score = 31.8 bits (63), Expect = 4.1 Identities = 15/33 (45%), Positives = 17/33 (51%) Frame = -3 / -2 Query: 310 SQGGTIGGLLDRTARRQTTRQHWHRIESRERDG 212 S GG GG A R+ R+ W R RERDG Sbjct: 195 SGGGRRGGAPAAKAGRRNRRRRWLRCSWRERDG 97
>LOC_Os02g40430:12002.t03679:unspliced-genomic HEAT repeat family protein, expressed| Length = 12723 Score = 31.8 bits (63), Expect = 4.1 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = -2 / +3 Query: 542 RVPPINLGQHETTLLYKDTTTRFSHRIRVPSSQHILRAQ 426 R+P + + +H + Y+D + R H +VP Q LR Q Sbjct: 8241 RMPQMQMDRHYLDMTYRDASHRNLHNHQVPHFQRPLRKQ 8357
>LOC_Os09g38650:12009.t03333:unspliced-genomic expressed protein| Length = 1605 Score = 31.8 bits (63), Expect = 4.1 Identities = 10/18 (55%), Positives = 10/18 (55%) Frame = -1 / -3 Query: 135 PWPSCRCR*RGPVPSWPW 82 PW CRCR P WPW Sbjct: 544 PWRRCRCRRCSPDLWWPW 491
>LOC_Os07g34964:12007.t004649:unspliced-genomic expressed protein| Length = 3578 Score = 31.8 bits (63), Expect = 4.1 Identities = 10/22 (45%), Positives = 11/22 (50%) Frame = -1 / +1 Query: 147 W*ADPWPSCRCR*RGPVPSWPW 82 W + WP C R P SWPW Sbjct: 499 WRSVSWPGLGCNSRSPSWSWPW 564
>LOC_Os01g67850:12001.t06142:unspliced-genomic protein binding protein, putative, expressed| Length = 3433 Score = 29.5 bits (58), Expect(2) = 4.8 Identities = 10/31 (32%), Positives = 20/31 (64%) Frame = +2 / -2 Query: 167 EALRLHRQLLRSGKDPVPLPRLDSMPVLSRR 259 E ++++RQL++ K P P+P L+ + + R Sbjct: 3369 EQMQINRQLVQVNKHPAPVPFLNHLAICQSR 3277 Score = 23.1 bits (44), Expect(2) = 4.8 Identities = 8/21 (38%), Positives = 10/21 (47%) Frame = +3 / -1 Query: 474 ESRCSILVQQCGLMLAEVDWG 536 E +CS C L+ V WG Sbjct: 1318 EMQCSNFKATCNLLWCHVTWG 1256
>LOC_Os02g15810:12002.t01374:unspliced-genomic expressed protein| Length = 2040 Score = 28.1 bits (55), Expect(2) = 5.5 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 / -3 Query: 104 PLHRHRQEGQGSAHQGLHLRPEALRL 181 PLHRH + +G+ H G LR RL Sbjct: 1567 PLHRHERGQRGARHAGALLRQLPPRL 1490 Score = 23.5 bits (45), Expect(2) = 5.5 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = +2 / -3 Query: 212 PVPLPRLDSMPVLSRRLPS 268 P P P +P LSR +PS Sbjct: 592 PCPCPSSSLLPGLSRSMPS 536
>LOC_Os09g08470:12009.t00641:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 5866 Score = 31.3 bits (62), Expect = 5.6 Identities = 14/34 (41%), Positives = 16/34 (47%) Frame = +3 / -2 Query: 279 SSNPPMVPPWL*VDWVPHCCTSSSTPVCSESPRL 380 +SNPP VPPW P C S P+ P L Sbjct: 1314 ASNPPAVPPWCSESRPPS*CR*PSAPLAVALPPL 1213
>LOC_Os08g40220:12008.t03753:unspliced-genomic hypothetical protein| Length = 290 Score = 31.3 bits (62), Expect = 5.6 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = +3 / +3 Query: 348 STPVCSESPRLLGIDVSVLNADGGRALCP*YVLAAW 455 S PVC+ S LL ++V + DGG + +V+ W Sbjct: 117 SNPVCTSSL*LLSYSLAVCSQDGGASSIERWVVGGW 224
>LOC_Os06g36330:12006.t03330:unspliced-genomic antiporter/ drug transporter/ transporter, putative, expressed| Length = 1707 Score = 31.3 bits (62), Expect = 5.6 Identities = 19/59 (32%), Positives = 25/59 (42%) Frame = +2 / -1 Query: 89 HEGTGPLHRHRQEGQGSAHQGLHLRPEALRLHRQLLRSGKDPVPLPRLDSMPVLSRRLP 265 HE HR + Q +A Q HL P L HR R G+ P + + + RLP Sbjct: 1035 HEHPHRRHRRPRLRQEAAQQDHHLVPPPLEAHRHAARRGEPRERAPSGEPLRRGTPRLP 859
>LOC_Os02g37690:12002.t03407:unspliced-genomic anthocyanidin 3-O-glucosyltransferase, putative, expressed| Length = 1667 Score = 31.3 bits (62), Expect = 5.6 Identities = 17/42 (40%), Positives = 20/42 (47%) Frame = +2 / +3 Query: 149 GLHLRPEALRLHRQLLRSGKDPVPLPRLDSMPVLSRRLPSGR 274 GL P LRLH RS PVP+ R+ +RR P R Sbjct: 87 GLARPPRVLRLHPAQHRSPPPPVPVRRVRRAAAPARRRPPRR 212
>LOC_Os02g16160:12002.t01409:unspliced-genomic conserved hypothetical protein| Length = 435 Score = 31.3 bits (62), Expect = 5.6 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -3 / +1 Query: 328 GTQSTHSQGGTIGGLLDRTARRQTTRQHWHRIESRERDG 212 G + + GGT+GG D A R+ R+ R +R RDG Sbjct: 67 GRPNGDATGGTVGGDGDERAARRGARRDSARGSARRRDG 183
>LOC_Os01g60410:12001.t05422:unspliced-genomic ubiquitin-conjugating enzyme E2-17 kDa, putative, expressed| Length = 4277 Score = 31.3 bits (62), Expect = 5.6 Identities = 10/33 (30%), Positives = 21/33 (63%) Frame = +3 / +3 Query: 306 WL*VDWVPHCCTSSSTPVCSESPRLLGIDVSVL 404 W+ D+ +C +S+ P+C+ P+L+ + S+L Sbjct: 3564 WVRTDYSNYCTETSNLPICTHRPKLMYRERSLL 3662
>LOC_Os01g19610:12001.t01751:unspliced-genomic expressed protein| Length = 3732 Score = 31.3 bits (62), Expect = 5.6 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = +3 / -2 Query: 342 SSSTPVCSESPRLLGIDVSVLNADG 416 SSSTP+ S +P L ID S + ADG Sbjct: 3506 SSSTPL*SMAPLSLSIDASCMQADG 3432
>LOC_Os04g13220:12004.t01143:unspliced-genomic multidrug resistance-associated protein 4, putative, expressed| Length = 8557 Score = 25.4 bits (49), Expect(3) = 5.9 Identities = 8/15 (53%), Positives = 9/15 (60%) Frame = +3 / +1 Query: 321 WVPHCCTSSSTPVCS 365 W CCT +S P CS Sbjct: 1411 WRLSCCTPTSAPPCS 1455 Score = 24.4 bits (47), Expect(3) = 5.9 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +2 / +3 Query: 422 CFVPLVCAGCLVP*CGVRISL*YPCTTMW 508 C VPL + GV IS+ Y TT+W Sbjct: 2619 CTVPLCATCAQLHT*GVSISVNYEQTTLW 2705 Score = 23.1 bits (44), Expect(3) = 5.9 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = +1 / +1 Query: 211 SRPAPATRFDASAVASFAVGP 273 SRP+ ++ F A+AVA+ + P Sbjct: 262 SRPSSSSPFPAAAVAALGMVP 324
>LOC_Os06g29810:12006.t02685:unspliced-genomic ATP binding protein, putative, expressed| Length = 4532 Score = 28.6 bits (56), Expect(2) = 6.1 Identities = 9/12 (75%), Positives = 9/12 (75%) Frame = +3 / +3 Query: 330 HCCTSSSTPVCS 365 HCC SSS P CS Sbjct: 1374 HCCLSSSPPACS 1409 Score = 24.0 bits (46), Expect(2) = 6.1 Identities = 8/23 (34%), Positives = 12/23 (52%) Frame = +3 / +1 Query: 492 LVQQCGLMLAEVDWGNTTIIRAE 560 ++Q CG +L V W N + E Sbjct: 1690 IMQMCGWLLKVVRWENLNCVHME 1758
>LOC_Os05g45950:12005.t04083:unspliced-genomic outer mitochondrial membrane protein porin, putative, expressed| Length = 3497 Score = 29.9 bits (59), Expect(2) = 6.6 Identities = 10/13 (76%), Positives = 13/13 (100%) Frame = +3 / +2 Query: 96 GPGLFTDIGKKAK 134 GPGL++DIGKKA+ Sbjct: 107 GPGLYSDIGKKAR 145 Score = 22.1 bits (42), Expect(2) = 6.6 Identities = 9/12 (75%), Positives = 9/12 (75%) Frame = +3 / +2 Query: 135 DLLTRDYTYDQK 170 DLL RDY DQK Sbjct: 299 DLLYRDYHTDQK 334
>LOC_Os09g08620:12009.t00656:unspliced-genomic F-box domain containing protein, expressed| Length = 3852 Score = 29.9 bits (59), Expect(2) = 7.2 Identities = 19/52 (36%), Positives = 21/52 (40%) Frame = +2 / +2 Query: 119 RQEGQGSAHQGLHLRPEALRLHRQLLRSGKDPVPLPRLDSMPVLSRRLPSGR 274 R+ AH+ H RP RL L P PLPR D RR P R Sbjct: 251 RRHAPHGAHRRAHRRPPPRRLRPPRLLLPLLPAPLPRRDQGLHHLRRPPRPR 406 Score = 22.1 bits (42), Expect(2) = 7.2 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +2 / +3 Query: 308 AMSRLGSTLLYVF*HSCLLGISAVVGY 388 ++SRL + YVF S L A++GY Sbjct: 1944 SISRLVRSFFYVFALSSLACARALLGY 2024
>LOC_Os11g43350:12011.t03865:unspliced-genomic transposon protein, putative, Mutator sub-class| Length = 5746 Score = 30.9 bits (61), Expect = 7.8 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +2 / +3 Query: 164 PEALRLHRQLLRSGKDPVPLPRLDSMPVLSRRLPS 268 P +L HR+ R P P + ++PVLS R+ S Sbjct: 5568 PHSLEAHRRCTRRSSRPPPHSQTLALPVLSHRIAS 5672
>LOC_Os10g40600:12010.t03300:unspliced-genomic peptide transporter PTR2, putative, expressed| Length = 4432 Score = 30.9 bits (61), Expect = 7.8 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +2 / -1 Query: 116 HRQEGQGSAHQGLHLRPEALRLHRQLLRSGKD 211 H +G+G AH+ R EA+R+ R R G D Sbjct: 3454 HAGDGEGEAHEDALERGEAVRVGRGAARDGDD 3359
>LOC_Os07g09720:12007.t00846:unspliced-genomic phosphoacetylglucosamine mutase, putative, expressed| Length = 3650 Score = 30.9 bits (61), Expect = 7.8 Identities = 11/25 (44%), Positives = 19/25 (76%) Frame = +2 / +1 Query: 311 MSRLGSTLLYVF*HSCLLGISAVVG 385 MS + ++L VF +SC+ G++AV+G Sbjct: 1663 MSHVHESILIVFWNSCMKGVNAVIG 1737
>LOC_Os06g20570:12006.t01874:unspliced-genomic glycosyltransferase, putative, expressed| Length = 3824 Score = 30.9 bits (61), Expect = 7.8 Identities = 14/30 (46%), Positives = 15/30 (50%) Frame = +2 / +3 Query: 92 EGTGPLHRHRQEGQGSAHQGLHLRPEALRL 181 E GP HRH +GQ H G R LRL Sbjct: 3039 EPQGPRHRHPPDGQQRLHHGRFPRLPPLRL 3128
>LOC_Os06g12580:12006.t01134:unspliced-genomic pro-resilin precursor, putative, expressed| Length = 3460 Score = 30.9 bits (61), Expect = 7.8 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = +2 / +2 Query: 104 PLHRHRQEGQGSAHQGLHLRPEALRLHRQLLRSGKDPVPLPRLDSMPVL 250 P R RQ + A + +RP A+R + L + P P R D +P+L Sbjct: 284 PRRRRRQGPRRRARRLRRVRPHAVRRRLRPLHHLRPPAPALRRDLLPLL 430
>LOC_Os05g43150:12005.t03808:unspliced-genomic transposon protein, putative, Mutator sub-class| Length = 5746 Score = 30.9 bits (61), Expect = 7.8 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +2 / +3 Query: 164 PEALRLHRQLLRSGKDPVPLPRLDSMPVLSRRLPS 268 P +L HR+ R P P + ++PVLS R+ S Sbjct: 5568 PHSLEAHRRCTRRSSRPPPHSQTLALPVLSHRIAS 5672
>LOC_Os05g05990:12005.t00489:unspliced-genomic transposon protein, putative, Mutator sub-class| Length = 4634 Score = 30.9 bits (61), Expect = 7.8 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +2 / +1 Query: 164 PEALRLHRQLLRSGKDPVPLPRLDSMPVLSRRLPS 268 P +L HR+ R P P + ++PVLS R+ S Sbjct: 4456 PHSLEAHRRCTRRSSRPPPHSQTLALPVLSHRIAS 4560
>LOC_Os05g04480:12005.t00344:unspliced-genomic transposon protein, putative, Mutator sub-class| Length = 3335 Score = 30.9 bits (61), Expect = 7.8 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +2 / +1 Query: 164 PEALRLHRQLLRSGKDPVPLPRLDSMPVLSRRLPS 268 P +L HR+ R P P + ++PVLS R+ S Sbjct: 3157 PHSLEAHRRCTRRSSRPPPHSQTLALPVLSHRIAS 3261
>LOC_Os04g38240:12004.t03394:unspliced-genomic transposon protein, putative, Mutator sub-class| Length = 5817 Score = 30.9 bits (61), Expect = 7.8 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +2 / +2 Query: 164 PEALRLHRQLLRSGKDPVPLPRLDSMPVLSRRLPS 268 P +L HR+ R P P + ++PVLS R+ S Sbjct: 5639 PHSLEAHRRCTRRSSRPPPHSQTLALPVLSHRIAS 5743
>LOC_Os04g30190:12004.t02706:unspliced-genomic transposon protein, putative, Mutator sub-class| Length = 5746 Score = 30.9 bits (61), Expect = 7.8 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +2 / +3 Query: 164 PEALRLHRQLLRSGKDPVPLPRLDSMPVLSRRLPS 268 P +L HR+ R P P + ++PVLS R+ S Sbjct: 5568 PHSLEAHRRCTRRSSRPPPHSQTLALPVLSHRIAS 5672
>LOC_Os04g13890:12004.t01209:unspliced-genomic transposon protein, putative, unclassified| Length = 4777 Score = 30.9 bits (61), Expect = 7.8 Identities = 18/78 (23%), Positives = 27/78 (34%) Frame = -3 / +1 Query: 481 RDSHTASGYQAASTY*GHKARPPSAFKTLTSIPNNRGDSEQTGVLEDVQQCGTQSTHSQG 302 R H + + S + ARPP GDS + + Q T ++G Sbjct: 1759 RQRHKGAAHGGPSPHVASGARPPGGRPRSAKADRTAGDSRAARLGQGTAQSRPSQTTARG 1938 Query: 301 GTIGGLLDRTARRQTTRQ 248 G G +AR R+ Sbjct: 1939 GAARGRRQPSARHHRQRR 1992
>LOC_Os04g10610:12004.t00892:unspliced-genomic SWIM zinc finger family protein| Length = 4156 Score = 30.9 bits (61), Expect = 7.8 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +2 / +3 Query: 164 PEALRLHRQLLRSGKDPVPLPRLDSMPVLSRRLPS 268 P +L HR+ R P P + ++PVLS R+ S Sbjct: 3978 PHSLEAHRRCTRRSSRPPPHSQTLALPVLSHRIAS 4082
>LOC_Os03g62370:12003.t05462:unspliced-genomic WD40-like Beta Propeller Repeat family protein, expressed| Length = 2328 Score = 30.9 bits (61), Expect = 7.8 Identities = 17/50 (34%), Positives = 21/50 (42%) Frame = +2 / +2 Query: 83 HGHEGTGPLHRHRQEGQGSAHQGLHLRPEALRLHRQLLRSGKDPVPLPRL 232 H G R R + GL LRL R+L R+G P PLP + Sbjct: 1751 HRAAAGGAQRRQRPDQPPMVQPGLQEPRLHLRLRRRLRRAGLQPSPLPAI 1900
>LOC_Os03g58960:12003.t05147:unspliced-genomic palmitoyltransferase ZDHHC20, putative, expressed| Length = 5633 Score = 30.9 bits (61), Expect = 7.8 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +2 / +2 Query: 146 QGLHLRPEALRLHRQLLRSGKDPVPLP 226 +G+ LRP ALR RQ + P PLP Sbjct: 341 RGVQLRPRALRRRRQHPPRARRPAPLP 421
>LOC_Os03g52350:12003.t04561:unspliced-genomic expressed protein| Length = 4362 Score = 30.9 bits (61), Expect = 7.8 Identities = 20/63 (31%), Positives = 30/63 (47%) Frame = -2 / -2 Query: 563 LLSSNDGRVPPINLGQHETTLLYKDTTTRFSHRIRVPSSQHILRAQSTASIRIQNTNINT 384 ++SS++G I+L + T +Y D R +HR S L QST RI +T Sbjct: 833 VVSSSEGSTFSISLYINSTQTIYLDAGARSNHRECANS*DCTLPQQSTKHGRIHQAFPHT 654 Query: 383 QQP 375 + P Sbjct: 653 RPP 645
>LOC_Os03g01950:12003.t00088:unspliced-genomic transposon protein, putative, Mutator sub-class, expressed| Length = 5746 Score = 30.9 bits (61), Expect = 7.8 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +2 / +3 Query: 164 PEALRLHRQLLRSGKDPVPLPRLDSMPVLSRRLPS 268 P +L HR+ R P P + ++PVLS R+ S Sbjct: 5568 PHSLEAHRRCTRRSSRPPPHSQTLALPVLSHRIAS 5672
>LOC_Os02g34300:12002.t03069:unspliced-genomic transposon protein, putative, Mutator sub-class| Length = 7769 Score = 30.9 bits (61), Expect = 7.8 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +2 / +3 Query: 164 PEALRLHRQLLRSGKDPVPLPRLDSMPVLSRRLPS 268 P +L HR+ R P P + ++PVLS R+ S Sbjct: 5640 PHSLEAHRRCTRRSSRPPPHSQTLALPVLSHRIAS 5744
>LOC_Os01g02240:12001.t00119:unspliced-genomic transposon protein, putative, Mutator sub-class| Length = 5817 Score = 30.9 bits (61), Expect = 7.8 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +2 / +2 Query: 164 PEALRLHRQLLRSGKDPVPLPRLDSMPVLSRRLPS 268 P +L HR+ R P P + ++PVLS R+ S Sbjct: 5639 PHSLEAHRRCTRRSSRPPPHSQTLALPVLSHRIAS 5743
>LOC_Os08g33100:12008.t03053:unspliced-genomic histone H2A.4, putative, expressed| Length = 794 Score = 30.9 bits (61), Expect = 7.8 Identities = 11/23 (47%), Positives = 12/23 (52%) Frame = -1 / -3 Query: 150 PW*ADPWPSCRCR*RGPVPSWPW 82 PW + WPS R R P P PW Sbjct: 168 PWSSATWPSWRRSSRSPCPYQPW 100
>LOC_Os04g57610:12004.t05227:unspliced-genomic auxin response factor 8, putative, expressed| Length = 7458 Score = 30.9 bits (61), Expect = 7.8 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = -1 / -3 Query: 474 LTPHQGTKQPAHTKGTKHGLHPHSKH*HQYPTTAEIPSKQ 355 L+PH+ T++P LH H +H HQ + +KQ Sbjct: 424 LSPHKSTRKPHPPPQIGRILHHHHQHQHQQQASTNHRAKQ 305
>LOC_Os04g55640:12004.t05036:unspliced-genomic plant-specific domain TIGR01627 family protein, expressed| Length = 1387 Score = 30.9 bits (61), Expect = 7.8 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = -1 / +3 Query: 327 EPNLLIAREEPSEGY*IVRPDGKRRDSTGIESSRGSGTGS 208 + N + PS G+ +VRPDG+R + S +GT S Sbjct: 1056 DENRVAGSGTPSLGHFVVRPDGRRDAFCSGQDSTAAGTSS 1175
>LOC_Os02g53700:12002.t04949:unspliced-genomic expressed protein| Length = 11625 Score = 30.9 bits (61), Expect = 7.8 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +1 / -3 Query: 211 SRPAPATRFDASAVASFAVGPY 276 S+ AP+ FDASA +FA+ PY Sbjct: 2461 SQMAPSHHFDASAATTFALWPY 2396
>LOC_Os01g67800:12001.t06137:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4335 Score = 29.5 bits (58), Expect(2) = 8.0 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = -3 / -1 Query: 376 RGDSEQTGVLEDVQQCGTQSTHSQGGTIGGL 284 RG+ V E+V + G + H QGG GL Sbjct: 3288 RGEDHVVDVEEEVGRVGATAQHEQGGVSAGL 3196 Score = 22.6 bits (43), Expect(2) = 8.0 Identities = 8/13 (61%), Positives = 8/13 (61%) Frame = -1 / -3 Query: 120 RCR*RGPVPSWPW 82 RCR RGP PW Sbjct: 691 RCRRRGPPRLQPW 653
>LOC_Os05g28340:12005.t02483:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2770 Score = 28.6 bits (56), Expect(2) = 9.8 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = -3 / -1 Query: 376 RGDSEQTGVLEDVQQCGTQSTHSQGGTIGGL 284 RG+ V E+V + G + H QGG GL Sbjct: 1708 RGEDHVVDVEEEVGRVGATAQHEQGGVGAGL 1616 Score = 22.6 bits (43), Expect(2) = 9.8 Identities = 8/13 (61%), Positives = 8/13 (61%) Frame = -1 / -1 Query: 120 RCR*RGPVPSWPW 82 RCR RGP PW Sbjct: 691 RCRRRGPPRLQPW 653 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 199,078,281 Number of extensions: 3191893 Number of successful extensions: 16829 Number of sequences better than 10.0: 62 Length of query: 191 Length of database: 55,613,886 Length adjustment: 48 Effective length of query: 143 Effective length of database: 52,912,542 Effective search space: 7566493506 Effective search space used: 7566493506 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
