ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf96n20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9SMX3:VDAC2_ARATH Outer mitochondrial membrane protein porin 2 ... 45 1e-04
2P42054:VDAC_PEA Outer plastidial membrane protein porin - Pisum ... 44 3e-04
3P42056:VDAC2_SOLTU 36 kDa outer mitochondrial membrane protein p... 44 3e-04
4Q9SRH5:VDAC1_ARATH Outer mitochondrial membrane protein porin 1 ... 43 7e-04
5P42055:VDAC1_SOLTU 34 kDa outer mitochondrial membrane protein p... 43 9e-04
6P46274:VDAC1_WHEAT Outer mitochondrial membrane protein porin - ... 40 0.004
7Q6K548:VDAC1_ORYSJ Outer mitochondrial membrane protein porin - ... 40 0.008
8P42057:VDAC_MAIZE Outer plastidial membrane protein porin - Zea ... 35 0.14
9O22213:CKX1_ARATH Cytokinin dehydrogenase 1 precursor - Arabidop... 30 4.6
10Q49884:ENGA_MYCLE GTP-binding protein engA - Mycobacterium leprae 30 7.8
11Q6PI73:LIRA6_HUMAN Leukocyte immunoglobulin-like receptor subfam... 30 7.9

>Q9SMX3:VDAC2_ARATH Outer mitochondrial membrane protein porin 2 - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 274
 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 20/26 (76%), Positives = 23/26 (88%)
 Frame = +3

Query: 93  KGPGLFTDIGKKAKDLLTRDYTYDQK 170
           KGPGL+T+IGKKA+DLL RDY  DQK
Sbjct: 3   KGPGLYTEIGKKARDLLYRDYQGDQK 28



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>P42054:VDAC_PEA Outer plastidial membrane protein porin - Pisum sativum (Garden|
           pea)
          Length = 276

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 19/26 (73%), Positives = 23/26 (88%)
 Frame = +3

Query: 93  KGPGLFTDIGKKAKDLLTRDYTYDQK 170
           KGPGL+TDIGKKA+DLL +DY  D+K
Sbjct: 3   KGPGLYTDIGKKARDLLYKDYHSDKK 28



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>P42056:VDAC2_SOLTU 36 kDa outer mitochondrial membrane protein porin - Solanum|
           tuberosum (Potato)
          Length = 276

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 19/26 (73%), Positives = 22/26 (84%)
 Frame = +3

Query: 93  KGPGLFTDIGKKAKDLLTRDYTYDQK 170
           KGPGL++DIGKKA+DLL RDY  D K
Sbjct: 3   KGPGLYSDIGKKARDLLYRDYVSDHK 28



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>Q9SRH5:VDAC1_ARATH Outer mitochondrial membrane protein porin 1 - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 276

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 18/26 (69%), Positives = 23/26 (88%)
 Frame = +3

Query: 93  KGPGLFTDIGKKAKDLLTRDYTYDQK 170
           KGPGL+T+IGKKA+DLL +D+  DQK
Sbjct: 3   KGPGLYTEIGKKARDLLYKDHNSDQK 28



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>P42055:VDAC1_SOLTU 34 kDa outer mitochondrial membrane protein porin - Solanum|
           tuberosum (Potato)
          Length = 276

 Score = 42.7 bits (99), Expect = 9e-04
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = +3

Query: 93  KGPGLFTDIGKKAKDLLTRDYTYDQK 170
           KGPGL+T+IGKKA+DLL +DY  D K
Sbjct: 3   KGPGLYTEIGKKARDLLYKDYQSDHK 28



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>P46274:VDAC1_WHEAT Outer mitochondrial membrane protein porin - Triticum aestivum|
           (Wheat)
          Length = 275

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 18/25 (72%), Positives = 20/25 (80%)
 Frame = +3

Query: 96  GPGLFTDIGKKAKDLLTRDYTYDQK 170
           GPGL++ IGKKAKDLL RDY  D K
Sbjct: 3   GPGLYSGIGKKAKDLLYRDYQTDHK 27



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>Q6K548:VDAC1_ORYSJ Outer mitochondrial membrane protein porin - Oryza sativa subsp.|
           japonica (Rice)
          Length = 274

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = +3

Query: 96  GPGLFTDIGKKAKDLLTRDYTYDQK 170
           GPGL+ +IGKKA+DLL RDY  D K
Sbjct: 3   GPGLYPEIGKKARDLLYRDYQTDHK 27



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>P42057:VDAC_MAIZE Outer plastidial membrane protein porin - Zea mays (Maize)|
          Length = 277

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +3

Query: 102 GLFTDIGKKAKDLLTRDYTYDQK 170
           GL+TDIGKK +DLL +DY   QK
Sbjct: 6   GLYTDIGKKTRDLLYKDYNTHQK 28



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>O22213:CKX1_ARATH Cytokinin dehydrogenase 1 precursor - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 575

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +2

Query: 110 HRHRQEGQGSAHQGLHLRPEALRLHRQLLRSGKDP 214
           H H  +GQ  AHQG+ ++ E+LR     +  GK P
Sbjct: 123 HGHSLQGQALAHQGVVIKMESLRSPDIRIYKGKQP 157



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>Q49884:ENGA_MYCLE GTP-binding protein engA - Mycobacterium leprae|
          Length = 461

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 23/72 (31%), Positives = 34/72 (47%)
 Frame = +3

Query: 345 SSTPVCSESPRLLGIDVSVLNADGGRALCP*YVLAAWYPDAV*ESRCSILVQQCGLMLAE 524
           +S P+  +  R+L + +     D GRAL    VLA    D V E RC +L ++    L +
Sbjct: 289 ASEPLTGQDQRVLSMVI-----DAGRAL----VLAFNKWDLVDEDRCDLLEREIDRELVQ 339

Query: 525 VDWGNTTIIRAE 560
           V W     I A+
Sbjct: 340 VRWAQRVNISAK 351



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>Q6PI73:LIRA6_HUMAN Leukocyte immunoglobulin-like receptor subfamily A member 6|
           precursor - Homo sapiens (Human)
          Length = 481

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 18/69 (26%), Positives = 29/69 (42%)
 Frame = -1

Query: 495 QGYYNEILTPHQGTKQPAHTKGTKHGLHPHSKH*HQYPTTAEIPSKQEC*KTYNSVEPNL 316
           +GY++  L   +G   P     + +G H +       P T+       C  +Y+S  P+L
Sbjct: 348 RGYFDTFLLTKEGAAHPPLRLRSMYGAHKYQAEFPMSPVTSAHAGTYRCYGSYSS-NPHL 406

Query: 315 LIAREEPSE 289
           L    EP E
Sbjct: 407 LSFPSEPLE 415


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 87,512,750
Number of extensions: 1845729
Number of successful extensions: 4735
Number of sequences better than 10.0: 11
Number of HSP's gapped: 4732
Number of HSP's successfully gapped: 11
Length of query: 191
Length of database: 100,686,439
Length adjustment: 107
Effective length of query: 84
Effective length of database: 71,336,874
Effective search space: 5992297416
Effective search space used: 5992297416
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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