Clone Name | FLbaf96n20 |
---|---|
Clone Library Name | barley_pub |
>Q9SMX3:VDAC2_ARATH Outer mitochondrial membrane protein porin 2 - Arabidopsis thaliana| (Mouse-ear cress) Length = 274 Score = 45.4 bits (106), Expect = 1e-04 Identities = 20/26 (76%), Positives = 23/26 (88%) Frame = +3 Query: 93 KGPGLFTDIGKKAKDLLTRDYTYDQK 170 KGPGL+T+IGKKA+DLL RDY DQK Sbjct: 3 KGPGLYTEIGKKARDLLYRDYQGDQK 28
>P42054:VDAC_PEA Outer plastidial membrane protein porin - Pisum sativum (Garden| pea) Length = 276 Score = 44.3 bits (103), Expect = 3e-04 Identities = 19/26 (73%), Positives = 23/26 (88%) Frame = +3 Query: 93 KGPGLFTDIGKKAKDLLTRDYTYDQK 170 KGPGL+TDIGKKA+DLL +DY D+K Sbjct: 3 KGPGLYTDIGKKARDLLYKDYHSDKK 28
>P42056:VDAC2_SOLTU 36 kDa outer mitochondrial membrane protein porin - Solanum| tuberosum (Potato) Length = 276 Score = 44.3 bits (103), Expect = 3e-04 Identities = 19/26 (73%), Positives = 22/26 (84%) Frame = +3 Query: 93 KGPGLFTDIGKKAKDLLTRDYTYDQK 170 KGPGL++DIGKKA+DLL RDY D K Sbjct: 3 KGPGLYSDIGKKARDLLYRDYVSDHK 28
>Q9SRH5:VDAC1_ARATH Outer mitochondrial membrane protein porin 1 - Arabidopsis thaliana| (Mouse-ear cress) Length = 276 Score = 43.1 bits (100), Expect = 7e-04 Identities = 18/26 (69%), Positives = 23/26 (88%) Frame = +3 Query: 93 KGPGLFTDIGKKAKDLLTRDYTYDQK 170 KGPGL+T+IGKKA+DLL +D+ DQK Sbjct: 3 KGPGLYTEIGKKARDLLYKDHNSDQK 28
>P42055:VDAC1_SOLTU 34 kDa outer mitochondrial membrane protein porin - Solanum| tuberosum (Potato) Length = 276 Score = 42.7 bits (99), Expect = 9e-04 Identities = 18/26 (69%), Positives = 22/26 (84%) Frame = +3 Query: 93 KGPGLFTDIGKKAKDLLTRDYTYDQK 170 KGPGL+T+IGKKA+DLL +DY D K Sbjct: 3 KGPGLYTEIGKKARDLLYKDYQSDHK 28
>P46274:VDAC1_WHEAT Outer mitochondrial membrane protein porin - Triticum aestivum| (Wheat) Length = 275 Score = 40.4 bits (93), Expect = 0.004 Identities = 18/25 (72%), Positives = 20/25 (80%) Frame = +3 Query: 96 GPGLFTDIGKKAKDLLTRDYTYDQK 170 GPGL++ IGKKAKDLL RDY D K Sbjct: 3 GPGLYSGIGKKAKDLLYRDYQTDHK 27
>Q6K548:VDAC1_ORYSJ Outer mitochondrial membrane protein porin - Oryza sativa subsp.| japonica (Rice) Length = 274 Score = 39.7 bits (91), Expect = 0.008 Identities = 17/25 (68%), Positives = 20/25 (80%) Frame = +3 Query: 96 GPGLFTDIGKKAKDLLTRDYTYDQK 170 GPGL+ +IGKKA+DLL RDY D K Sbjct: 3 GPGLYPEIGKKARDLLYRDYQTDHK 27
>P42057:VDAC_MAIZE Outer plastidial membrane protein porin - Zea mays (Maize)| Length = 277 Score = 35.4 bits (80), Expect = 0.14 Identities = 15/23 (65%), Positives = 18/23 (78%) Frame = +3 Query: 102 GLFTDIGKKAKDLLTRDYTYDQK 170 GL+TDIGKK +DLL +DY QK Sbjct: 6 GLYTDIGKKTRDLLYKDYNTHQK 28
>O22213:CKX1_ARATH Cytokinin dehydrogenase 1 precursor - Arabidopsis thaliana| (Mouse-ear cress) Length = 575 Score = 30.4 bits (67), Expect = 4.6 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = +2 Query: 110 HRHRQEGQGSAHQGLHLRPEALRLHRQLLRSGKDP 214 H H +GQ AHQG+ ++ E+LR + GK P Sbjct: 123 HGHSLQGQALAHQGVVIKMESLRSPDIRIYKGKQP 157
>Q49884:ENGA_MYCLE GTP-binding protein engA - Mycobacterium leprae| Length = 461 Score = 29.6 bits (65), Expect = 7.8 Identities = 23/72 (31%), Positives = 34/72 (47%) Frame = +3 Query: 345 SSTPVCSESPRLLGIDVSVLNADGGRALCP*YVLAAWYPDAV*ESRCSILVQQCGLMLAE 524 +S P+ + R+L + + D GRAL VLA D V E RC +L ++ L + Sbjct: 289 ASEPLTGQDQRVLSMVI-----DAGRAL----VLAFNKWDLVDEDRCDLLEREIDRELVQ 339 Query: 525 VDWGNTTIIRAE 560 V W I A+ Sbjct: 340 VRWAQRVNISAK 351
>Q6PI73:LIRA6_HUMAN Leukocyte immunoglobulin-like receptor subfamily A member 6| precursor - Homo sapiens (Human) Length = 481 Score = 29.6 bits (65), Expect = 7.9 Identities = 18/69 (26%), Positives = 29/69 (42%) Frame = -1 Query: 495 QGYYNEILTPHQGTKQPAHTKGTKHGLHPHSKH*HQYPTTAEIPSKQEC*KTYNSVEPNL 316 +GY++ L +G P + +G H + P T+ C +Y+S P+L Sbjct: 348 RGYFDTFLLTKEGAAHPPLRLRSMYGAHKYQAEFPMSPVTSAHAGTYRCYGSYSS-NPHL 406 Query: 315 LIAREEPSE 289 L EP E Sbjct: 407 LSFPSEPLE 415 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 87,512,750 Number of extensions: 1845729 Number of successful extensions: 4735 Number of sequences better than 10.0: 11 Number of HSP's gapped: 4732 Number of HSP's successfully gapped: 11 Length of query: 191 Length of database: 100,686,439 Length adjustment: 107 Effective length of query: 84 Effective length of database: 71,336,874 Effective search space: 5992297416 Effective search space used: 5992297416 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)