ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf99a12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK100379:Os06g0711100 | 172 | 1e-43 | 2 | AK069893:Os06g0711100 | 172 | 1e-43 | 3 | AK102831:Os06g0711600 | 60 | 1e-09 | 4 | AK064384:Os06g0711600 | 60 | 1e-09 | 5 | AK108753:Os06g0711200 | 52 | 3e-07 | 6 | AK102621:Os01g0852200 | 31 | 0.91 | 7 | AK063954:Os01g0852200 | 31 | 0.91 | 8 | AK100466:Os01g0698100 | 29 | 2.6 | 9 | Os05g0472600:Os05g0472600 | 28 | 5.8 | 10 | Os03g0738100:Os03g0738100 | 28 | 5.8 | 11 | AK100681:Os06g0728300 | 28 | 5.9 | 12 | AK072698:Os01g0852200 | 28 | 5.9 | 13 | Os07g0415700:Os07g0415700 | 28 | 7.7 | 14 | Os06g0729500:Os06g0729500 | 27 | 10.0 | 15 | Os04g0434500:Os04g0434500 | 27 | 10.0 | 16 | AK108887: | 27 | 10.0 |
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>AK100379:Os06g0711100 | Length = 300 Score = 172 bits (437), Expect = 1e-43 Identities = 77/94 (81%), Positives = 81/94 (86%) Frame = +2 Query: 17 KKSPRKKGGKDGVVVQNWKVDPRCPNAGNPFHICAQYCFDHLNEAASTPTSKPDSRKGKA 196 K S RKKGGK+ VVQNWKVDPRCPNA NPFHICAQYCFDHLNE TSKPDSRKGKA Sbjct: 207 KSSSRKKGGKEISVVQNWKVDPRCPNASNPFHICAQYCFDHLNETGQKDTSKPDSRKGKA 266 Query: 197 VMKAEPTGEINPDCVNASNPYHKCGEYCKSNGNR 298 V+KAE TGEINPDCVNASNPYHKCGE+CK G+R Sbjct: 267 VVKAEQTGEINPDCVNASNPYHKCGEHCKRKGDR 300 Score = 65.5 bits (158), Expect = 3e-11 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 12/91 (13%) Frame = +2 Query: 44 KDGVVVQNWKVDPRCPNAGNPFHICAQYCFDHLNEAASTPT------------SKPDSRK 187 ++G KVDPRCPNA NPFH+C ++C + E + + S+ S Sbjct: 101 REGADGDGKKVDPRCPNAPNPFHVCTEHCAAKMAEVSRSSEGGKSPMSLFSRHSRRSSSS 160 Query: 188 GKAVMKAEPTGEINPDCVNASNPYHKCGEYC 280 +++ + +++P C NA NP+H+C E+C Sbjct: 161 EDGSVRSGSSKKVDPKCPNAGNPFHECTEHC 191 Score = 44.7 bits (104), Expect = 6e-05 Identities = 36/139 (25%), Positives = 45/139 (32%), Gaps = 54/139 (38%) Frame = +2 Query: 74 VDPRCPNAGNPFHICAQYCFDHLNEAAST--PTSKPDSRKGKAVMKAEPTG--------- 220 V+P CPNA NPFH CA YC AA+ P P SR + A G Sbjct: 7 VNPACPNAANPFHRCADYCPVPAPAAATAKPPPPPPSSRPAQNGTAAPQNGTAAAQNGIA 66 Query: 221 -------------------------------------------EINPDCVNASNPYHKCG 271 +++P C NA NP+H C Sbjct: 67 EQNGSTHSDGELQAKPRRRDRAGGSGGLPFYVFLREGADGDGKKVDPRCPNAPNPFHVCT 126 Query: 272 EYCKSNGNR*MRLSRYGLS 328 E+C + R S G S Sbjct: 127 EHCAAKMAEVSRSSEGGKS 145
>AK069893:Os06g0711100 | Length = 300 Score = 172 bits (437), Expect = 1e-43 Identities = 77/94 (81%), Positives = 81/94 (86%) Frame = +2 Query: 17 KKSPRKKGGKDGVVVQNWKVDPRCPNAGNPFHICAQYCFDHLNEAASTPTSKPDSRKGKA 196 K S RKKGGK+ VVQNWKVDPRCPNA NPFHICAQYCFDHLNE TSKPDSRKGKA Sbjct: 207 KSSSRKKGGKEISVVQNWKVDPRCPNASNPFHICAQYCFDHLNETGQKDTSKPDSRKGKA 266 Query: 197 VMKAEPTGEINPDCVNASNPYHKCGEYCKSNGNR 298 V+KAE TGEINPDCVNASNPYHKCGE+CK G+R Sbjct: 267 VVKAEQTGEINPDCVNASNPYHKCGEHCKRKGDR 300 Score = 65.5 bits (158), Expect = 3e-11 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 12/91 (13%) Frame = +2 Query: 44 KDGVVVQNWKVDPRCPNAGNPFHICAQYCFDHLNEAASTPT------------SKPDSRK 187 ++G KVDPRCPNA NPFH+C ++C + E + + S+ S Sbjct: 101 REGADGDGKKVDPRCPNAPNPFHVCTEHCAAKMAEVSRSSEGGKSPMSLFSRHSRRSSSS 160 Query: 188 GKAVMKAEPTGEINPDCVNASNPYHKCGEYC 280 +++ + +++P C NA NP+H+C E+C Sbjct: 161 EDGSVRSGSSKKVDPKCPNAGNPFHECTEHC 191 Score = 44.7 bits (104), Expect = 6e-05 Identities = 36/139 (25%), Positives = 45/139 (32%), Gaps = 54/139 (38%) Frame = +2 Query: 74 VDPRCPNAGNPFHICAQYCFDHLNEAAST--PTSKPDSRKGKAVMKAEPTG--------- 220 V+P CPNA NPFH CA YC AA+ P P SR + A G Sbjct: 7 VNPACPNAANPFHRCADYCPVPAPAAATAKPPPPPPSSRPAQNGTAAPQNGTAAAQNGIA 66 Query: 221 -------------------------------------------EINPDCVNASNPYHKCG 271 +++P C NA NP+H C Sbjct: 67 EQNGSTHSDGELQAKPRRRDRAGGSGGLPFYVFLREGADGDGKKVDPRCPNAPNPFHVCT 126 Query: 272 EYCKSNGNR*MRLSRYGLS 328 E+C + R S G S Sbjct: 127 EHCAAKMAEVSRSSEGGKS 145
>AK102831:Os06g0711600 | Length = 340 Score = 60.5 bits (145), Expect = 1e-09 Identities = 28/70 (40%), Positives = 35/70 (50%) Frame = +2 Query: 71 KVDPRCPNAGNPFHICAQYCFDHLNEAASTPTSKPDSRKGKAVMKAEPTGEINPDCVNAS 250 K P C N+ NPFH C+ YC + EA + + V +PDC+NAS Sbjct: 11 KSRPECINSSNPFHECSDYCLRKIAEAKERIEDEQRPPVDRTV---------HPDCINAS 61 Query: 251 NPYHKCGEYC 280 NPYH C EYC Sbjct: 62 NPYHVCSEYC 71 Score = 40.4 bits (93), Expect = 0.001 Identities = 14/28 (50%), Positives = 20/28 (71%) Frame = +2 Query: 74 VDPRCPNAGNPFHICAQYCFDHLNEAAS 157 V P C NA NP+H+C++YCF + +A S Sbjct: 53 VHPDCINASNPYHVCSEYCFKRIADAKS 80 Score = 39.3 bits (90), Expect = 0.003 Identities = 11/22 (50%), Positives = 19/22 (86%) Frame = +2 Query: 215 TGEINPDCVNASNPYHKCGEYC 280 +G+ P+C+N+SNP+H+C +YC Sbjct: 9 SGKSRPECINSSNPFHECSDYC 30
>AK064384:Os06g0711600 | Length = 340 Score = 60.5 bits (145), Expect = 1e-09 Identities = 28/70 (40%), Positives = 35/70 (50%) Frame = +2 Query: 71 KVDPRCPNAGNPFHICAQYCFDHLNEAASTPTSKPDSRKGKAVMKAEPTGEINPDCVNAS 250 K P C N+ NPFH C+ YC + EA + + V +PDC+NAS Sbjct: 11 KSRPECINSSNPFHECSDYCLRKIAEAKERIEDEQRPPVDRTV---------HPDCINAS 61 Query: 251 NPYHKCGEYC 280 NPYH C EYC Sbjct: 62 NPYHVCSEYC 71 Score = 40.4 bits (93), Expect = 0.001 Identities = 14/28 (50%), Positives = 20/28 (71%) Frame = +2 Query: 74 VDPRCPNAGNPFHICAQYCFDHLNEAAS 157 V P C NA NP+H+C++YCF + +A S Sbjct: 53 VHPDCINASNPYHVCSEYCFKRIADAKS 80 Score = 39.3 bits (90), Expect = 0.003 Identities = 11/22 (50%), Positives = 19/22 (86%) Frame = +2 Query: 215 TGEINPDCVNASNPYHKCGEYC 280 +G+ P+C+N+SNP+H+C +YC Sbjct: 9 SGKSRPECINSSNPFHECSDYC 30
>AK108753:Os06g0711200 | Length = 171 Score = 52.4 bits (124), Expect = 3e-07 Identities = 24/70 (34%), Positives = 35/70 (50%) Frame = +2 Query: 71 KVDPRCPNAGNPFHICAQYCFDHLNEAASTPTSKPDSRKGKAVMKAEPTGEINPDCVNAS 250 K P C N+ NP+H C+ YC + + S+ D+ + V +P C+NAS Sbjct: 11 KSRPDCVNSSNPYHECSDYCLRQIVK------SREDNHRWSRV---------HPHCINAS 55 Query: 251 NPYHKCGEYC 280 NPYH C +C Sbjct: 56 NPYHACSNFC 65 Score = 44.7 bits (104), Expect = 6e-05 Identities = 15/23 (65%), Positives = 19/23 (82%) Frame = +2 Query: 212 PTGEINPDCVNASNPYHKCGEYC 280 P G+ PDCVN+SNPYH+C +YC Sbjct: 8 PPGKSRPDCVNSSNPYHECSDYC 30 Score = 38.1 bits (87), Expect = 0.006 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +2 Query: 71 KVDPRCPNAGNPFHICAQYCFDHLNEAASTPT 166 +V P C NA NP+H C+ +CF + A +P+ Sbjct: 46 RVHPHCINASNPYHACSNFCFRRIIHAKPSPS 77
>AK102621:Os01g0852200 | Length = 427 Score = 30.8 bits (68), Expect = 0.91 Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 1/76 (1%) Frame = -1 Query: 249 DALTQSGLISPVGSAFMTAFPFLESGL-LVGVDAASFK*SKQYWAHIWNGLPAFGHLGST 73 D L Q+G + M F+ G+ L+G++AA W I GL +FGH G Sbjct: 292 DRLIQNGTSITLTRKIMQTIGFVGPGVALLGLNAAKSPVIASAWLTIAVGLKSFGHSGFL 351 Query: 72 FQFCTTTPSFPPFLRG 25 P + L G Sbjct: 352 VNLQEIAPQYAGVLHG 367
>AK063954:Os01g0852200 | Length = 519 Score = 30.8 bits (68), Expect = 0.91 Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 1/76 (1%) Frame = -1 Query: 249 DALTQSGLISPVGSAFMTAFPFLESGL-LVGVDAASFK*SKQYWAHIWNGLPAFGHLGST 73 D L Q+G + M F+ G+ L+G++AA W I GL +FGH G Sbjct: 384 DRLIQNGTSITLTRKIMQTIGFVGPGVALLGLNAAKSPVIASAWLTIAVGLKSFGHSGFL 443 Query: 72 FQFCTTTPSFPPFLRG 25 P + L G Sbjct: 444 VNLQEIAPQYAGVLHG 459
>AK100466:Os01g0698100 | Length = 900 Score = 29.3 bits (64), Expect = 2.6 Identities = 15/32 (46%), Positives = 20/32 (62%) Frame = -2 Query: 533 LILHEQHHEEYVYVYRCKEKYTREHQKDGAAA 438 +++HEQ HE V C E+ TR+ QK AAA Sbjct: 294 VVVHEQGHESSVSAIHCNEE-TRDGQKATAAA 324
>Os05g0472600:Os05g0472600 | Length = 228 Score = 28.1 bits (61), Expect = 5.8 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Frame = -3 Query: 421 SRTRHSYYLLQLKNG*-CREH-HLFFTIIIYSSGETIS*QPHLSVAITFAIFSTLVVRIG 248 S RHS++ G C E H+ I+++ +G I + HL A+T AIF +L +G Sbjct: 98 SAGRHSHFAAMHAGGDSCSERCHIGIRIVLFLNG--IPARFHLKSAVTMAIFFSLTTPVG 155 Query: 247 CIDTIRI 227 + I I Sbjct: 156 IMIGIGI 162
>Os03g0738100:Os03g0738100 | Length = 3341 Score = 28.1 bits (61), Expect = 5.8 Identities = 15/50 (30%), Positives = 23/50 (46%) Frame = +2 Query: 86 CPNAGNPFHICAQYCFDHLNEAASTPTSKPDSRKGKAVMKAEPTGEINPD 235 CP+ G +H A +C H N + S SK + A+ E++PD Sbjct: 1343 CPSMGKAWHSYASWCITHANYSLSGTDSKLQNSLFPALQ-----SELSPD 1387
>AK100681:Os06g0728300 | Length = 105 Score = 28.1 bits (61), Expect = 5.9 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = +1 Query: 22 VPAQERWEGWCGGAKLEGRSEVPKCGQPVPYMRPVLFRSFE*SG 153 V A+ RW GG + R +VP CG +P M P + SG Sbjct: 29 VSAERRWRRRFGGCR---RRDVPVCGGLMPRMAPAELKPTTRSG 69
>AK072698:Os01g0852200 | Length = 459 Score = 28.1 bits (61), Expect = 5.9 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Frame = -1 Query: 249 DALTQSGLISPVGSAFMTAFPFLESGL-LVGVDAASFK*SKQYWAHIWNGLPAFGHLG 79 D L Q+G + M F+ G+ L+G++AA W I GL +FGH G Sbjct: 384 DRLIQNGTSITLTRKIMQTIGFVGPGVALLGLNAAKSPVIASAWLTIAVGLKSFGHSG 441
>Os07g0415700:Os07g0415700 | Length = 172 Score = 27.7 bits (60), Expect = 7.7 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = -1 Query: 666 LTH*LREKKTRLNSNVLQKNMTPIHS-GNILAIHDT 562 + H R+ K+ +N+N +QKN TP G I A+ T Sbjct: 132 IAHRWRQWKSDMNTNYVQKNKTPFEEWGTISAVSGT 167
>Os06g0729500:Os06g0729500 | Length = 1573 Score = 27.3 bits (59), Expect = 10.0 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 10/65 (15%) Frame = +2 Query: 5 EKADKKSPRKKGGKDGVVVQ-------NWKVDPRCP---NAGNPFHICAQYCFDHLNEAA 154 +K +KSP+KKG K G + N + C +A +P + D L+E + Sbjct: 609 DKPPRKSPKKKGNKKGKHYRRAVCKGLNLPSETHCEENIDAASPVEVLTDLLADKLSETS 668 Query: 155 STPTS 169 S+ +S Sbjct: 669 SSASS 673
>Os04g0434500:Os04g0434500 | Length = 283 Score = 27.3 bits (59), Expect = 10.0 Identities = 18/63 (28%), Positives = 28/63 (44%) Frame = +2 Query: 2 QEKADKKSPRKKGGKDGVVVQNWKVDPRCPNAGNPFHICAQYCFDHLNEAASTPTSKPDS 181 +E A+K+ R DG + D C G H+ + +H N+ AS+PTS + Sbjct: 179 REFAEKQGWRINRNDDGAL------DRFCVEIGVKRHVLKVWMHNHKNQLASSPTSAAAA 232 Query: 182 RKG 190 G Sbjct: 233 AAG 235
>AK108887: | Length = 648 Score = 27.3 bits (59), Expect = 10.0 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = +2 Query: 107 FHICAQYCFDHLNEAASTPTSKPDSRKGKAVMKA 208 FH Q+C D N A PD+ K +AV+ + Sbjct: 596 FHKRIQFCLDSYNAAVKDMRFPPDAHKPQAVLNS 629 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 20,348,556 Number of extensions: 477409 Number of successful extensions: 1314 Number of sequences better than 10.0: 16 Number of HSP's gapped: 1302 Number of HSP's successfully gapped: 34 Length of query: 230 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 133 Effective length of database: 11,515,878 Effective search space: 1531611774 Effective search space used: 1531611774 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
