Clone Name | FLbaf98p03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AK072178:Os02g0619600 | 27 | 3.3 | 2 | Os04g0582000:Os04g0582000 | 26 | 5.5 | 3 | AK100117:Os09g0392100 | 26 | 5.5 | 4 | AK121874:Os04g0675200 | 26 | 7.2 | 5 | AK110648:Os03g0192800 | 26 | 7.2 | 6 | AK108955: | 26 | 7.2 | 7 | AK069656:Os05g0145700 | 26 | 7.2 | 8 | Os09g0460200:Os09g0460200 | 25 | 9.4 | 9 | AK108333:Os07g0287800 | 25 | 9.4 |
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>AK072178:Os02g0619600 | Length = 709 Score = 26.9 bits (58), Expect = 3.3 Identities = 14/50 (28%), Positives = 21/50 (42%) Frame = -3 Query: 175 HCVVPNCPSMLFKNASRDRRKETRLRKTKQITGIIWTPHHSSHPSSCATA 26 H PN P+ A RR ++ + K + I + P S H + TA Sbjct: 51 HVSAPNTPAAALPGAGPLRRSKSGTKSAKGMCAICFDPMKSGHGQALFTA 100
>Os04g0582000:Os04g0582000 | Length = 720 Score = 26.2 bits (56), Expect = 5.5 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 4/34 (11%) Frame = -3 Query: 106 RLRKTKQITGIIWTPHHSSHPS-SCA---TATLE 17 R KTK I+ ++W HS H + +CA TA LE Sbjct: 211 RTGKTKTISALLWVMLHSGHRTLTCAPTNTAVLE 244
>AK100117:Os09g0392100 | Length = 621 Score = 26.2 bits (56), Expect = 5.5 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Frame = -3 Query: 169 VVPNCPSMLFKNASRDRRKETRLRKTKQI-TGIIWTPHHSSHPSSCA 32 VV +C ++ F AS+ T + G + HH+SHP CA Sbjct: 14 VVAHCAALSFPPASQPPPPPTTSSSSSGAGAGASFQVHHASHPYPCA 60
>AK121874:Os04g0675200 | Length = 1308 Score = 25.8 bits (55), Expect = 7.2 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 159 IAHPCSSK--TRAGTDERKLASEKQNKLQESSGHLITHH 49 + P S+K TR G+ E +ASE+Q L H HH Sbjct: 597 VPFPTSTKCLTRLGSTELWIASEEQQLLMRPFLHHFIHH 635
>AK110648:Os03g0192800 | Length = 317 Score = 25.8 bits (55), Expect = 7.2 Identities = 7/18 (38%), Positives = 11/18 (61%) Frame = -1 Query: 183 QFYIVWSPIAHPCSSKTR 130 Q Y+VW P+ H C ++ Sbjct: 47 QLYMVWKPVCHGCHGNSK 64
>AK108955: | Length = 257 Score = 25.8 bits (55), Expect = 7.2 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = -2 Query: 149 HALQKREQGQTKGNSPPKNKTNYRNHLDT 63 ++ +K E G+ K P N+ +YR++ DT Sbjct: 26 YSFEKYENGKPKWAPAPDNQQDYRDYRDT 54
>AK069656:Os05g0145700 | Length = 387 Score = 25.8 bits (55), Expect = 7.2 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%) Frame = -3 Query: 190 LCTILHCVVPNC---PSMLFKNASRDRRKETRLRKTKQITGI 74 LCT+ C+ P C P +L R+ ET LR K + G+ Sbjct: 145 LCTLKPCIPPTCLVDPKLLH---IRESSTETVLRAAKFVMGL 183
>Os09g0460200:Os09g0460200 | Length = 600 Score = 25.4 bits (54), Expect = 9.4 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 3/47 (6%) Frame = -1 Query: 144 SSKTRAGTDERKLASEKQNK---LQESSGHLITHHTQVRVLQLHSND 13 S G E K+A EK L ES GH + + +R+ Q ND Sbjct: 218 SDNITVGVAEMKVAIEKTGGIVVLAESFGHSVFKDSLLRIFQSSDND 264
>AK108333:Os07g0287800 | Length = 151 Score = 25.4 bits (54), Expect = 9.4 Identities = 12/37 (32%), Positives = 20/37 (54%) Frame = -1 Query: 171 VWSPIAHPCSSKTRAGTDERKLASEKQNKLQESSGHL 61 +WS H C AG+ ER+ S +Q +++ + HL Sbjct: 77 IWSSGHHSCCDGLGAGSGERRTVSWEQ-RIERQAEHL 112 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 6,602,877 Number of extensions: 118520 Number of successful extensions: 357 Number of sequences better than 10.0: 9 Number of HSP's gapped: 357 Number of HSP's successfully gapped: 9 Length of query: 88 Length of database: 15,399,855 Length adjustment: 59 Effective length of query: 29 Effective length of database: 13,037,436 Effective search space: 378085644 Effective search space used: 378085644 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)