ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf98p03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK072178:Os02g0619600 27 3.3
2Os04g0582000:Os04g0582000 26 5.5
3AK100117:Os09g0392100 26 5.5
4AK121874:Os04g0675200 26 7.2
5AK110648:Os03g0192800 26 7.2
6AK108955: 26 7.2
7AK069656:Os05g0145700 26 7.2
8Os09g0460200:Os09g0460200 25 9.4
9AK108333:Os07g0287800 25 9.4

>AK072178:Os02g0619600 |
          Length = 709
 Score = 26.9 bits (58), Expect = 3.3
 Identities = 14/50 (28%), Positives = 21/50 (42%)
 Frame = -3

Query: 175 HCVVPNCPSMLFKNASRDRRKETRLRKTKQITGIIWTPHHSSHPSSCATA 26
           H   PN P+     A   RR ++  +  K +  I + P  S H  +  TA
Sbjct: 51  HVSAPNTPAAALPGAGPLRRSKSGTKSAKGMCAICFDPMKSGHGQALFTA 100



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>Os04g0582000:Os04g0582000 |
          Length = 720

 Score = 26.2 bits (56), Expect = 5.5
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
 Frame = -3

Query: 106 RLRKTKQITGIIWTPHHSSHPS-SCA---TATLE 17
           R  KTK I+ ++W   HS H + +CA   TA LE
Sbjct: 211 RTGKTKTISALLWVMLHSGHRTLTCAPTNTAVLE 244



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>AK100117:Os09g0392100 |
          Length = 621

 Score = 26.2 bits (56), Expect = 5.5
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = -3

Query: 169 VVPNCPSMLFKNASRDRRKETRLRKTKQI-TGIIWTPHHSSHPSSCA 32
           VV +C ++ F  AS+     T    +     G  +  HH+SHP  CA
Sbjct: 14  VVAHCAALSFPPASQPPPPPTTSSSSSGAGAGASFQVHHASHPYPCA 60



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>AK121874:Os04g0675200 |
          Length = 1308

 Score = 25.8 bits (55), Expect = 7.2
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = -1

Query: 159 IAHPCSSK--TRAGTDERKLASEKQNKLQESSGHLITHH 49
           +  P S+K  TR G+ E  +ASE+Q  L     H   HH
Sbjct: 597 VPFPTSTKCLTRLGSTELWIASEEQQLLMRPFLHHFIHH 635



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>AK110648:Os03g0192800 |
          Length = 317

 Score = 25.8 bits (55), Expect = 7.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 183 QFYIVWSPIAHPCSSKTR 130
           Q Y+VW P+ H C   ++
Sbjct: 47  QLYMVWKPVCHGCHGNSK 64



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>AK108955: |
          Length = 257

 Score = 25.8 bits (55), Expect = 7.2
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 149 HALQKREQGQTKGNSPPKNKTNYRNHLDT 63
           ++ +K E G+ K    P N+ +YR++ DT
Sbjct: 26  YSFEKYENGKPKWAPAPDNQQDYRDYRDT 54



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>AK069656:Os05g0145700 |
          Length = 387

 Score = 25.8 bits (55), Expect = 7.2
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = -3

Query: 190 LCTILHCVVPNC---PSMLFKNASRDRRKETRLRKTKQITGI 74
           LCT+  C+ P C   P +L     R+   ET LR  K + G+
Sbjct: 145 LCTLKPCIPPTCLVDPKLLH---IRESSTETVLRAAKFVMGL 183



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>Os09g0460200:Os09g0460200 |
          Length = 600

 Score = 25.4 bits (54), Expect = 9.4
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
 Frame = -1

Query: 144 SSKTRAGTDERKLASEKQNK---LQESSGHLITHHTQVRVLQLHSND 13
           S     G  E K+A EK      L ES GH +   + +R+ Q   ND
Sbjct: 218 SDNITVGVAEMKVAIEKTGGIVVLAESFGHSVFKDSLLRIFQSSDND 264



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>AK108333:Os07g0287800 |
          Length = 151

 Score = 25.4 bits (54), Expect = 9.4
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -1

Query: 171 VWSPIAHPCSSKTRAGTDERKLASEKQNKLQESSGHL 61
           +WS   H C     AG+ ER+  S +Q +++  + HL
Sbjct: 77  IWSSGHHSCCDGLGAGSGERRTVSWEQ-RIERQAEHL 112


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 6,602,877
Number of extensions: 118520
Number of successful extensions: 357
Number of sequences better than 10.0: 9
Number of HSP's gapped: 357
Number of HSP's successfully gapped: 9
Length of query: 88
Length of database: 15,399,855
Length adjustment: 59
Effective length of query: 29
Effective length of database: 13,037,436
Effective search space: 378085644
Effective search space used: 378085644
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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