ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf96m09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q741V3:GLMU_MYCPA Bifunctional protein glmU [Includes: UDP-N-ace... 30 6.4
2Q1B431:GLMU_MYCSS Bifunctional protein glmU [Includes: UDP-N-ace... 30 8.4

>Q741V3:GLMU_MYCPA Bifunctional protein glmU [Includes: UDP-N-acetylglucosamine|
           pyrophosphorylase - Mycobacterium paratuberculosis
          Length = 490
 Score = 30.4 bits (67), Expect = 6.4
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = +2

Query: 35  INMDGRQSFLLNDIKNHIRNGGNVTHILNVKVSNEPTNGAGTIIRQRI 178
           +N DG +S     + +H+R G +   +  V V +    GAGT++R+ +
Sbjct: 396 VNYDG-ESKRRTTVGSHVRTGSDTMFVAPVTVGDGAYTGAGTVVREDV 442



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>Q1B431:GLMU_MYCSS Bifunctional protein glmU [Includes: UDP-N-acetylglucosamine|
           pyrophosphorylase - Mycobacterium sp. (strain MCS)
          Length = 497

 Score = 30.0 bits (66), Expect = 8.4
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +2

Query: 35  INMDGRQSFLLNDIKNHIRNGGNVTHILNVKVSNEPTNGAGTIIRQRI 178
           +N DG ++     I +H+R G +   +  V V +    GAGT+IR+ +
Sbjct: 398 VNYDG-ETKNRTTIGSHVRTGSDTMFVAPVTVGDGAYTGAGTVIRRNV 444


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 125,169,837
Number of extensions: 2877061
Number of successful extensions: 6030
Number of sequences better than 10.0: 2
Number of HSP's gapped: 6029
Number of HSP's successfully gapped: 2
Length of query: 226
Length of database: 100,686,439
Length adjustment: 109
Effective length of query: 117
Effective length of database: 70,788,284
Effective search space: 8282229228
Effective search space used: 8282229228
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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