Clone Name | FLbaf98o08 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AK066042:Os09g0529300 | 236 | 2e-62 | 2 | AK100555:Os01g0976500 | 33 | 0.54 | 3 | Os08g0526700:Os08g0526700 | 30 | 3.5 | 4 | AK073228:Os03g0333300 | 30 | 4.5 | 5 | AK063107:Os02g0452600 | 30 | 4.5 |
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>AK066042:Os09g0529300 | Length = 306 Score = 236 bits (602), Expect = 2e-62 Identities = 130/203 (64%), Positives = 140/203 (68%) Frame = +2 Query: 134 EKEDSVCESVAEQDTEALLLRDVLLNGILAIGTLGHNVNSLCPDACHEQDEFIVMXXXXX 313 EKEDS+ SV EQDTEALLLRDVL+NGILAIGTLGHNVNSLCP++C EQDE I+M Sbjct: 49 EKEDSLRASVTEQDTEALLLRDVLINGILAIGTLGHNVNSLCPESCIEQDEPIIMCDEKV 108 Query: 314 XXXXXXXXXXXXXXXALXXXXXXXXXXXXXXKMHSSSMKEYNFTCSLKEEILMCEVEVED 493 KMHSSSMKE NF C +KEEILM +EVED Sbjct: 109 EQEKCEEEKAEAKQDTPVTAPSEPASALEPAKMHSSSMKEDNFMCFVKEEILMHGMEVED 168 Query: 494 VAQIQERPLLMVEKVEKVRTTLADLFAAEAFSPSDTEEKSYEKTAIIAGASTSKPALCME 673 V IQERPLLM+EKVEKVRTTLADLFAAEAFS SD E+K Y K I+AGASTSKP CME Sbjct: 169 VPNIQERPLLMLEKVEKVRTTLADLFAAEAFSSSDAEDKCYPKIVIVAGASTSKPTSCME 228 Query: 674 KTHKKKTIKPMPDPLKATRKLSR 742 K H KK KP PLKATRKLSR Sbjct: 229 KMHHKKPTKPTSKPLKATRKLSR 251
>AK100555:Os01g0976500 | Length = 930 Score = 32.7 bits (73), Expect = 0.54 Identities = 17/68 (25%), Positives = 30/68 (44%) Frame = +2 Query: 86 MHSNAEYCTIDENKATEKEDSVCESVAEQDTEALLLRDVLLNGILAIGTLGHNVNSLCPD 265 M+ N ID++ A E+ + + + TE ++ +GI L +N + Sbjct: 151 MNKNTTSAPIDKDNAREEISRLQKEILVMQTEKEFIKSSYESGIAKYWDLEKQINDMQEQ 210 Query: 266 ACHEQDEF 289 CH QD+F Sbjct: 211 VCHFQDKF 218
>Os08g0526700:Os08g0526700 | Length = 488 Score = 30.0 bits (66), Expect = 3.5 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Frame = +1 Query: 883 HWIPHSALEVRI-PLLERRIQPHRTTLVDNVSVPDPLPVRPP 1005 HWI H L+++ P RR PHR+ P P RPP Sbjct: 9 HWIYHQRLDLQYKPFPRRRRLPHRSRRAAASPSSPPPPPRPP 50
>AK073228:Os03g0333300 | Length = 270 Score = 29.6 bits (65), Expect = 4.5 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 1/76 (1%) Frame = +2 Query: 476 EVEVEDVAQIQE-RPLLMVEKVEKVRTTLADLFAAEAFSPSDTEEKSYEKTAIIAGASTS 652 E +VE ++ E P +K +K + + D PSD +K EKT + A T Sbjct: 4 EEQVERKEEVSELTPFDPTKKKKKKKVVIQD--------PSDEVDKLAEKTESLTVAETG 55 Query: 653 KPALCMEKTHKKKTIK 700 +P+ K KKK ++ Sbjct: 56 EPSFTGMKKKKKKHVE 71
>AK063107:Os02g0452600 | Length = 87 Score = 29.6 bits (65), Expect = 4.5 Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 6/77 (7%) Frame = +2 Query: 581 AFSPSDTEEKSYEKTAIIAGASTS------KPALCMEKTHKKKTIKPMPDPLKATRKLSR 742 A S + +EEK+ A+ AS S K +C KTH ++T P+P P+ L R Sbjct: 6 AKSRARSEEKTRVARAVGGVASPSRRNRSAKSPICPPKTHSRRTDFPLPPPIPL---LPR 62 Query: 743 AVKKMLGKKIHPEQLNG 793 L KI +G Sbjct: 63 RESSKLASKIKNTDRHG 79 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 32,171,277 Number of extensions: 701654 Number of successful extensions: 1980 Number of sequences better than 10.0: 5 Number of HSP's gapped: 1975 Number of HSP's successfully gapped: 5 Length of query: 409 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 306 Effective length of database: 11,275,632 Effective search space: 3450343392 Effective search space used: 3450343392 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)