ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf98o08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK066042:Os09g0529300 236 2e-62
2AK100555:Os01g0976500 33 0.54
3Os08g0526700:Os08g0526700 30 3.5
4AK073228:Os03g0333300 30 4.5
5AK063107:Os02g0452600 30 4.5

>AK066042:Os09g0529300 |
          Length = 306
 Score =  236 bits (602), Expect = 2e-62
 Identities = 130/203 (64%), Positives = 140/203 (68%)
 Frame = +2

Query: 134 EKEDSVCESVAEQDTEALLLRDVLLNGILAIGTLGHNVNSLCPDACHEQDEFIVMXXXXX 313
           EKEDS+  SV EQDTEALLLRDVL+NGILAIGTLGHNVNSLCP++C EQDE I+M     
Sbjct: 49  EKEDSLRASVTEQDTEALLLRDVLINGILAIGTLGHNVNSLCPESCIEQDEPIIMCDEKV 108

Query: 314 XXXXXXXXXXXXXXXALXXXXXXXXXXXXXXKMHSSSMKEYNFTCSLKEEILMCEVEVED 493
                                          KMHSSSMKE NF C +KEEILM  +EVED
Sbjct: 109 EQEKCEEEKAEAKQDTPVTAPSEPASALEPAKMHSSSMKEDNFMCFVKEEILMHGMEVED 168

Query: 494 VAQIQERPLLMVEKVEKVRTTLADLFAAEAFSPSDTEEKSYEKTAIIAGASTSKPALCME 673
           V  IQERPLLM+EKVEKVRTTLADLFAAEAFS SD E+K Y K  I+AGASTSKP  CME
Sbjct: 169 VPNIQERPLLMLEKVEKVRTTLADLFAAEAFSSSDAEDKCYPKIVIVAGASTSKPTSCME 228

Query: 674 KTHKKKTIKPMPDPLKATRKLSR 742
           K H KK  KP   PLKATRKLSR
Sbjct: 229 KMHHKKPTKPTSKPLKATRKLSR 251



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>AK100555:Os01g0976500 |
          Length = 930

 Score = 32.7 bits (73), Expect = 0.54
 Identities = 17/68 (25%), Positives = 30/68 (44%)
 Frame = +2

Query: 86  MHSNAEYCTIDENKATEKEDSVCESVAEQDTEALLLRDVLLNGILAIGTLGHNVNSLCPD 265
           M+ N     ID++ A E+   + + +    TE   ++    +GI     L   +N +   
Sbjct: 151 MNKNTTSAPIDKDNAREEISRLQKEILVMQTEKEFIKSSYESGIAKYWDLEKQINDMQEQ 210

Query: 266 ACHEQDEF 289
            CH QD+F
Sbjct: 211 VCHFQDKF 218



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>Os08g0526700:Os08g0526700 |
          Length = 488

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = +1

Query: 883  HWIPHSALEVRI-PLLERRIQPHRTTLVDNVSVPDPLPVRPP 1005
            HWI H  L+++  P   RR  PHR+          P P RPP
Sbjct: 9    HWIYHQRLDLQYKPFPRRRRLPHRSRRAAASPSSPPPPPRPP 50



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>AK073228:Os03g0333300 |
          Length = 270

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = +2

Query: 476 EVEVEDVAQIQE-RPLLMVEKVEKVRTTLADLFAAEAFSPSDTEEKSYEKTAIIAGASTS 652
           E +VE   ++ E  P    +K +K +  + D        PSD  +K  EKT  +  A T 
Sbjct: 4   EEQVERKEEVSELTPFDPTKKKKKKKVVIQD--------PSDEVDKLAEKTESLTVAETG 55

Query: 653 KPALCMEKTHKKKTIK 700
           +P+    K  KKK ++
Sbjct: 56  EPSFTGMKKKKKKHVE 71



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>AK063107:Os02g0452600 |
          Length = 87

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
 Frame = +2

Query: 581 AFSPSDTEEKSYEKTAIIAGASTS------KPALCMEKTHKKKTIKPMPDPLKATRKLSR 742
           A S + +EEK+    A+   AS S      K  +C  KTH ++T  P+P P+     L R
Sbjct: 6   AKSRARSEEKTRVARAVGGVASPSRRNRSAKSPICPPKTHSRRTDFPLPPPIPL---LPR 62

Query: 743 AVKKMLGKKIHPEQLNG 793
                L  KI     +G
Sbjct: 63  RESSKLASKIKNTDRHG 79


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 32,171,277
Number of extensions: 701654
Number of successful extensions: 1980
Number of sequences better than 10.0: 5
Number of HSP's gapped: 1975
Number of HSP's successfully gapped: 5
Length of query: 409
Length of database: 15,399,855
Length adjustment: 103
Effective length of query: 306
Effective length of database: 11,275,632
Effective search space: 3450343392
Effective search space used: 3450343392
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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