>LOC_Os09g35980:12009.t03076:unspliced-genomic expressed protein|
Length = 3140
Score = 191 bits (411), Expect(5) = 4e-95
Identities = 85/112 (75%), Positives = 90/112 (80%)
Frame = +2 / +1
Query: 407 KMHSSSMKEYNFTCSLKEEILMCEVEVEDVAQIQERPLLMVEKVEKVRTTLADLFAAEAF 586
KMHSSSMKE NF C +KEEILM +EVEDV IQERPLLM+EKVEKVRTTLADLFAAEAF
Sbjct: 679 KMHSSSMKEDNFMCFVKEEILMHGMEVEDVPNIQERPLLMLEKVEKVRTTLADLFAAEAF 858
Query: 587 SPSDTEEKSYEKTAIIAGASTSKPALCMEKTHKKKTIKPMPDPLKATRKLSR 742
S SD E+K Y K I+AGASTSKP CMEK H KK KP PLKATRKLSR
Sbjct: 859 SSSDAEDKCYPKIVIVAGASTSKPTSCMEKMHHKKPTKPTSKPLKATRKLSR 1014
Score = 107 bits (228), Expect(5) = 4e-95
Identities = 45/55 (81%), Positives = 50/55 (90%)
Frame = +2 / +1
Query: 134 EKEDSVCESVAEQDTEALLLRDVLLNGILAIGTLGHNVNSLCPDACHEQDEFIVM 298
EKEDS+ SV EQDTEALLLRDVL+NGILAIGTLGHNVNSLCP++C EQDE I+M
Sbjct: 406 EKEDSLRASVTEQDTEALLLRDVLINGILAIGTLGHNVNSLCPESCIEQDEPIIM 570
Score = 52.8 bits (109), Expect(5) = 4e-95
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +2 / +3
Query: 59 KVFSWLNRKMHSNAEYCTIDENKATEKEDSV 151
+VF+WLNRK HSN EYCTI+ENK + S+
Sbjct: 225 QVFNWLNRKKHSNVEYCTINENKGKDTRISL 317
Score = 51.9 bits (107), Expect(5) = 4e-95
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +2 / +3
Query: 746 VKKMLGKKIHPEQLNGRSNAEEP 814
++KMLGKKIHPEQLNGRSNAE P
Sbjct: 1248 MRKMLGKKIHPEQLNGRSNAEGP 1316
Score = 37.7 bits (76), Expect(5) = 4e-95
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3 / +2
Query: 3 SYCLAFTSDFRLALERWP*RCSV 71
SYCLAF+S F L LERW *R +V
Sbjct: 2 SYCLAFSSGFILVLERWL*RYTV 70
Score = 187 bits (402), Expect(6) = 4e-88
Identities = 82/128 (64%), Positives = 90/128 (70%)
Frame = -3 / -3
Query: 742 ST*FSRSL*RIWHWLYCLLFMRLFHAQCRF*SGCPSNNGSLLVTLLLCITW*ECFGCK*I 563
ST*FS SL R+ W LL M L HA+ R *SGCPSNN VTL+LCIT *ECF K*I
Sbjct: 1014 ST*FSCSLQRL*RWFCWLLVMHLLHARRRL*SGCPSNNDDFRVTLILCIT**ECFCSK*I 835
Query: 562 SKCSSHFFHLLYHQKWPFLDLSNILHFNFTHQDFFL*RTCEVVFFHRR*MHLGRFNSRFW 383
KCSSHF HLL HQKW FLD+ NI HF+ H DF L + EVVFFHR *+HLGR SR
Sbjct: 834 GKCSSHFLHLL*HQKWSFLDVRNIFHFHAMH*DFLLHKAHEVVFFHR**VHLGRLKSRCR 655
Query: 382 FTWCCSQC 359
FTWCC+ C
Sbjct: 654 FTWCCNWC 631
Score = 84.0 bits (177), Expect(6) = 4e-88
Identities = 35/55 (63%), Positives = 43/55 (78%)
Frame = -3 / -3
Query: 298 HDDELILFMAGIRAKGVHVVAKCANRKYSIKKHITEEQGFSILLSHTLAHRVFLL 134
HDD LILF G+R + V++VA+ AN KY+I KHITE+QG S+LLSHT RVFLL
Sbjct: 570 HDDGLILFNTGLRTE*VYIVAQRANCKYTINKHITEQQGLSVLLSHTCTQRVFLL 406
Score = 51.9 bits (107), Expect(6) = 4e-88
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = -3 / -1
Query: 856 EKTNLLPSLGTKQRRFLCITTSIELLWVDLLPQHLLH 746
E+ L +L R LCI TSIELLWVDLLPQHL H
Sbjct: 1358 ERKLLSTNLALCSDRALCIATSIELLWVDLLPQHLPH 1248
Score = 50.1 bits (103), Expect(6) = 4e-88
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = -2 / -3
Query: 134 PWPYFHRWCSTQH*NASSDSAN*TP 60
P+P H WC+T+H*NASSDSAN*TP
Sbjct: 300 PYPCSH*WCNTRH*NASSDSAN*TP 226
Score = 39.6 bits (80), Expect(6) = 4e-88
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = -1 / -1
Query: 69 LNTFRAISLEPI*SQR*KPDSS 4
L TFRAISLEPI*+Q+ KPDSS
Sbjct: 68 LCTFRAISLEPI*NQKRKPDSS 3
Score = 24.4 bits (47), Expect(6) = 4e-88
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1 / -1
Query: 1023 QAIPRHWRANRQR 985
+ I HWRANRQ+
Sbjct: 3053 RTILHHWRANRQQ 3015
Score = 159 bits (342), Expect(5) = 2e-73
Identities = 71/126 (56%), Positives = 85/126 (67%)
Frame = +1 / +3
Query: 367 YSTKXXXXXXXXXQDAFIVDERIQLHMFFKGRNPDVXXXXXXXXXNPGTATSDGREGGKS 546
YSTK QDA I+DER QLH+ +G NP+ +PGT TSD REGG+S
Sbjct: 639 YSTK*TGICS*ACQDALIIDERRQLHVLCEGGNPNAWHGSGRCS*HPGTTTSDVREGGES 818
Query: 547 ENYTC*SICSRSILTK*YRGEELREDCHYCWGIHFKTCIVHGKDA*KEDNKANARSAKGY 726
ENYTC SIC RSIL K* RG L E+ H CWGIHFK +VHG+DA +E NK N ++A+GY
Sbjct: 819 ENYTCRSICCRSILIK*CRG*VLPENRHCCWGIHFKAYVVHGEDASQEANKTNVKAAEGY 998
Query: 727 EKIKSS 744
+KIKSS
Sbjct: 999 KKIKSS 1016
Score = 79.0 bits (166), Expect(5) = 2e-73
Identities = 35/57 (61%), Positives = 41/57 (71%)
Frame = +3 / +2
Query: 132 RRRKTLCARVWLSKILKPCSSVMCFLMEYLRLAHLATT*TPFALMPAMNKMSSSSWI 302
+RRKTLC +V LSK L+PC SVMC LM YL+LA AT *T L P +NKMS SS +
Sbjct: 404 KRRKTLCVQV*LSKTLRPCCSVMCLLMVYLQLARWATM*THSVLSPVLNKMSPSSCV 574
Score = 51.5 bits (106), Expect(5) = 2e-73
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = +1 / +2
Query: 748 EEDAGEEDPPRAAQWT**CRGTSAAWCLGSVTSL 849
EED GEEDPPRAAQWT* CRG LG T +
Sbjct: 1250 EEDVGEEDPPRAAQWT*QCRGPCHCIMLGLWTKV 1351
Score = 41.8 bits (85), Expect(5) = 2e-73
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +3 / +1
Query: 60 RCSVG*IGRCILMLSTAPSMKIRPR 134
RCS+G*IGR ILM S APSM+ R R
Sbjct: 226 RCSIG*IGRSILMSSIAPSMRTRVR 300
Score = 35.4 bits (71), Expect(5) = 2e-73
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = +2 / +1
Query: 2 ELLSGFHL*LQIGSREMALKVFS 70
ELLSGF IGSREMALKV S
Sbjct: 1 ELLSGFLFWFHIGSREMALKVHS 69
Score = 123 bits (264), Expect(5) = 1e-55
Identities = 55/89 (61%), Positives = 65/89 (73%)
Frame = -2 / -2
Query: 671 PCTMQVLKWMPQQ*WQSSRNSSPLYHLVRMLRLQIDQQV*FSLFPPSLPSEVAVPGFEQH 492
PCT LKWMPQQ + S N+ PL+HL+RML QID+QV*FSL PPSL SEV VPG +H
Sbjct: 943 PCTT*ALKWMPQQQ*RFSGNTYPLHHLMRMLLQQIDRQV*FSLSPPSLTSEVVVPGC*EH 764
Query: 491 PPLQLHTSGFLPLKNM*SCILSSTMNASW 405
PL H GF P ++ *SC+LSS M+ASW
Sbjct: 763 LPLPCHALGFPPSQST*SCLLSSMMSASW 677
Score = 66.6 bits (139), Expect(5) = 1e-55
Identities = 29/50 (58%), Positives = 32/50 (64%)
Frame = -2 / -2
Query: 284 HLVHGRHQGKGSSRCGQVCQSQVFH*EAHHGGAGLQYLAQPHSRTQSLPS 135
HLV R Q + S CG CQ QV+H* AHHG AG Q LAQ H +SLPS
Sbjct: 556 HLVQYRTQDRVSLHCGPACQLQVYH**AHHGAAGPQCLAQSHLHAESLPS 407
Score = 49.2 bits (101), Expect(5) = 1e-55
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = -1 / -2
Query: 135 SVALFSSMVQYSALECIFRFSQLNTF 58
S+ LFS MVQYS LEC FRFSQLNT+
Sbjct: 301 SLPLFSLMVQYSTLECFFRFSQLNTW 224
Score = 35.0 bits (70), Expect(5) = 1e-55
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -3 / -3
Query: 70 TEHL*GHLSRANLKSEVKARQ*L 2
T +L* HLSR N+K E KARQ*L
Sbjct: 69 TVYL*SHLSRTNMKPEEKARQ*L 1
Score = 32.7 bits (65), Expect(5) = 1e-55
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1 / -2
Query: 783 CSGWIFFPSIFFTARL 736
CSGWIFFP+IF L
Sbjct: 1285 CSGWIFFPNIFLMTYL 1238
Score = 109 bits (232), Expect(4) = 4e-47
Identities = 47/66 (71%), Positives = 52/66 (78%)
Frame = +3 / +2
Query: 405 PRCIHRR*KNTTSHVL*RKKS*CVKLKWRMLLKSRNGHF*W*RRWKK*ELHLLIYLQPKH 584
PRC H R*K TTS L*R+KS*C+ KW+M L SRN HF* *RRW+K*ELHL IYL KH
Sbjct: 677 PRCTHHR*KKTTSCAL*RRKS*CMAWKWKMFLTSRNDHF*C*RRWRK*ELHLPIYLLQKH 856
Query: 585 SHQVIQ 602
SHQV+Q
Sbjct: 857 SHQVMQ 874
Score = 56.1 bits (116), Expect(4) = 4e-47
Identities = 25/41 (60%), Positives = 29/41 (70%)
Frame = +1 / +3
Query: 157 ECG*ARY*SPAPP*CAS*WNTCDWHTWPQRELPLP*CLP*T 279
+C *AR+* PA P*CA *W TC+WH PQ +L L * L *T
Sbjct: 429 KCD*ARH*GPAAP*CAY*WYTCNWHAGPQCKLTLS*VLY*T 551
Score = 49.2 bits (101), Expect(4) = 4e-47
Identities = 22/36 (61%), Positives = 24/36 (66%)
Frame = +3 / +1
Query: 753 RCWGRRSTQSSSMDVVMQRNLRCLVPRLGNKFVFSI 860
RCWGRRSTQSSSMDV MQR L R +K S+
Sbjct: 1255 RCWGRRSTQSSSMDVAMQRALSLHNARFVDKSFLSL 1362
Score = 43.7 bits (89), Expect(4) = 4e-47
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = +1 / +3
Query: 4 ATVWLSPLTSDWL*RDGPKGVQLAESEDAF 93
ATVWLS L S W *RDG KG QL ++ F
Sbjct: 3 ATVWLSLLVSYWF*RDGSKGTQLVHADTPF 92
Score = 51.9 bits (107), Expect(5) = 1e-25
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = -1 / -1
Query: 279 CSWQASGQREFTLWPSVPIASIPL 208
CS Q SGQ EFTLWPSVPIASIPL
Sbjct: 551 CSIQDSGQSEFTLWPSVPIASIPL 480
Score = 43.2 bits (88), Expect(5) = 1e-25
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -3 / -1
Query: 127 LIFIDGAVLSIRMHLPIQPTEHL 59
L+ IDGA+L IRM LPIQP EHL
Sbjct: 293 LVLIDGAILDIRMLLPIQPIEHL 225
Score = 40.5 bits (82), Expect(5) = 1e-25
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -1 / -1
Query: 681 CVFSMHNAGFEVDAPAIM 628
C+FSMH+ GFEVDAPA M
Sbjct: 953 CIFSMHDVGFEVDAPATM 900
Score = 35.0 bits (70), Expect(5) = 1e-25
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1 / -1
Query: 456 FKEHVKLYSFIDDECIL 406
F +H+KL SFIDDECIL
Sbjct: 728 FTKHMKLSSFIDDECIL 678
Score = 33.1 bits (66), Expect(5) = 1e-25
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -1 / -1
Query: 555 VVLTFSTFSTIRSGR 511
VVLTFSTFS IRSGR
Sbjct: 827 VVLTFSTFSNIRSGR 783
Score = 34.1 bits (68), Expect = 2.1
Identities = 18/30 (60%), Positives = 19/30 (63%)
Frame = -2 / -2
Query: 92 NASSDSAN*TPLGPSL*SQSEVRGESQTVA 3
N S N PL PSL*+Q E R ESQTVA
Sbjct: 91 NGVSA*TNCVPLEPSL*NQYETRRESQTVA 2
>LOC_Os03g55890:12003.t04850:unspliced-genomic ternary complex factor MIP1, putative, expressed|
Length = 4178
Score = 32.2 bits (64), Expect = 7.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1 / -2
Query: 730 KIKSSREEDAGEEDPPRAAQWT**CRGTS 816
K++S E+ ++ PP WT CRGT+
Sbjct: 1930 KVESGMTEELSQDCPPMVKSWTNKCRGTT 1844
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 461,726,502
Number of extensions: 7352352
Number of successful extensions: 27386
Number of sequences better than 10.0: 21
Length of query: 409
Length of database: 55,613,886
Length adjustment: 50
Effective length of query: 359
Effective length of database: 52,799,986
Effective search space: 18955194974
Effective search space used: 18955194974
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)