ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf96k18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P34731:FAS1_CANAL Fatty acid synthase subunit beta - Candida alb... 31 4.2
2P07149:FAS1_YEAST Fatty acid synthase subunit beta - Saccharomyc... 31 5.4
3P52370:VGLM_BHV1C Glycoprotein M - Bovine herpesvirus 1.1 (strai... 30 9.3
4P34229:FAS1_YARLI Fatty acid synthase subunit beta - Yarrowia li... 30 9.3
5P50415:BCTN7_SHEEP Bactenecin-7 precursor - Ovis aries (Sheep) 30 9.3

>P34731:FAS1_CANAL Fatty acid synthase subunit beta - Candida albicans (Yeast)|
          Length = 2037
 Score = 31.2 bits (69), Expect = 4.2
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -1

Query: 676 NKSPYISDFGPSESRGLGGHTHK*REGT 593
           +K+ +I DFGP    GLG  TH+ +EGT
Sbjct: 481 HKATHILDFGPGGVSGLGVLTHRNKEGT 508



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>P07149:FAS1_YEAST Fatty acid synthase subunit beta - Saccharomyces cerevisiae|
           (Baker's yeast)
          Length = 2051

 Score = 30.8 bits (68), Expect = 5.4
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -1

Query: 673 KSPYISDFGPSESRGLGGHTHK*REGT 593
           K+ +I DFGP  + GLG  TH+ ++GT
Sbjct: 497 KATHILDFGPGGASGLGVLTHRNKDGT 523



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>P52370:VGLM_BHV1C Glycoprotein M - Bovine herpesvirus 1.1 (strain Cooper) (BoHV-1)|
           (Infectious bovine rhinotracheitis virus)
          Length = 411

 Score = 30.0 bits (66), Expect = 9.3
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +1

Query: 217 AAPPRSLPLRRSCTRKRPRTARMPWR 294
           AA P  L  RR CTR+ PR AR P+R
Sbjct: 388 AASP--LTTRRPCTRRTPRPARQPYR 411



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>P34229:FAS1_YARLI Fatty acid synthase subunit beta - Yarrowia lipolytica (Candida|
           lipolytica)
          Length = 2086

 Score = 30.0 bits (66), Expect = 9.3
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -1

Query: 673 KSPYISDFGPSESRGLGGHTHK*REGT 593
           ++ +I DFGP  + GLG  THK ++GT
Sbjct: 509 QASHIVDFGPGGASGLGLLTHKNKDGT 535



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>P50415:BCTN7_SHEEP Bactenecin-7 precursor - Ovis aries (Sheep)|
          Length = 190

 Score = 30.0 bits (66), Expect = 9.3
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +1

Query: 226 PRSLPLRRSCTRKRPRTARMPWR 294
           PRSLPL R   R+ PR   +PWR
Sbjct: 151 PRSLPLPRPQPRRIPRPILLPWR 173


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 87,740,980
Number of extensions: 1631081
Number of successful extensions: 3969
Number of sequences better than 10.0: 5
Number of HSP's gapped: 3968
Number of HSP's successfully gapped: 5
Length of query: 240
Length of database: 100,686,439
Length adjustment: 110
Effective length of query: 130
Effective length of database: 70,513,989
Effective search space: 9166818570
Effective search space used: 9166818570
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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