ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf96k17 |
|---|---|
| Clone Library Name | barley_pub |
>AK064685:Os01g0839300 | Length = 161 Score = 301 bits (772), Expect = 3e-82 Identities = 149/161 (92%), Positives = 155/161 (96%) Frame = +2 Query: 32 MGKFRKLGRHAAHRVSMLRTMVSQLVKHERIETTVAKAKEVRRKADQMVQLGKDGTLDAA 211 MGKFRKLGRHAAHRVSMLRTMVSQLVKHERIETTVAKAKEVRRKADQMVQLGK+GTLDAA Sbjct: 1 MGKFRKLGRHAAHRVSMLRTMVSQLVKHERIETTVAKAKEVRRKADQMVQLGKEGTLDAA 60 Query: 212 RRASAFVRGDDVVHKLFTELAYRYKDRAGGYTRLLRTRIRIGDAAPMAYIEFVDRENELR 391 RRASAFVRGDDVVHKLFTELAYRYK+RAGGYTRLLRTRIR+GDAAPMAYIEFVDRENELR Sbjct: 61 RRASAFVRGDDVVHKLFTELAYRYKNRAGGYTRLLRTRIRVGDAAPMAYIEFVDRENELR 120 Query: 392 EAKPATPPPPQRVPLDPWAKSRASQQWAGPKVTVNPKSEGL 514 EAKPATP PPQR PLDPWAKSRASQQWAGPK++ + EGL Sbjct: 121 EAKPATPQPPQRSPLDPWAKSRASQQWAGPKISEGSRKEGL 161
>AK103320:Os05g0460700 | Length = 196 Score = 213 bits (542), Expect = 1e-55 Identities = 108/123 (87%), Positives = 115/123 (93%) Frame = +2 Query: 32 MGKFRKLGRHAAHRVSMLRTMVSQLVKHERIETTVAKAKEVRRKADQMVQLGKDGTLDAA 211 MGKFRKLGRHAAHRVSMLRTMVSQLVKHERIETTVAKAKEVR KADQMVQLGK+GTLDAA Sbjct: 1 MGKFRKLGRHAAHRVSMLRTMVSQLVKHERIETTVAKAKEVRTKADQMVQLGKEGTLDAA 60 Query: 212 RRASAFVRGDDVVHKLFTELAYRYKDRAGGYTRLLRTRIRIGDAAPMAYIEFVDRENELR 391 RRASAFVRGD+VVHKLFTELAYRYKDRAGGYTRLLRTRIR+GDAAPMAYIE +++ + Sbjct: 61 RRASAFVRGDNVVHKLFTELAYRYKDRAGGYTRLLRTRIRVGDAAPMAYIEHSKKKSSVS 120 Query: 392 EAK 400 K Sbjct: 121 FTK 123 Score = 51.2 bits (121), Expect = 8e-07 Identities = 28/51 (54%), Positives = 32/51 (62%) Frame = +3 Query: 366 LLTERTNSERPNLQRHHRLSGFHLIHGPNLVLASNGRDRKLP*TPNQKAYE 518 L T R N ER NLQ H LSG LIHGP+ A+NG+ K TP QKAY+ Sbjct: 130 LSTGRMNFERQNLQHHSHLSGSLLIHGPSHSPANNGQVLKSARTPEQKAYD 180
>AK104198:Os03g0815400 | Length = 210 Score = 100 bits (249), Expect = 1e-21 Identities = 52/108 (48%), Positives = 73/108 (67%) Frame = +2 Query: 47 KLGRHAAHRVSMLRTMVSQLVKHERIETTVAKAKEVRRKADQMVQLGKDGTLDAARRASA 226 KL R R ++LR + +QL+K+ RI+TT +AK +R+ ++M+ L KDG+L R+A A Sbjct: 103 KLSRPPDQRKALLRGLTTQLLKYGRIKTTRPRAKAMRKYVEKMITLAKDGSLHKRRQALA 162 Query: 227 FVRGDDVVHKLFTELAYRYKDRAGGYTRLLRTRIRIGDAAPMAYIEFV 370 F+ +VH LF E+A RY +R GGYTR++ T R GD APMAYIE V Sbjct: 163 FIYEKHIVHALFAEVADRYGEREGGYTRIIPTFPRRGDNAPMAYIELV 210
>AK067057:Os03g0815400 | Length = 210 Score = 100 bits (249), Expect = 1e-21 Identities = 52/108 (48%), Positives = 73/108 (67%) Frame = +2 Query: 47 KLGRHAAHRVSMLRTMVSQLVKHERIETTVAKAKEVRRKADQMVQLGKDGTLDAARRASA 226 KL R R ++LR + +QL+K+ RI+TT +AK +R+ ++M+ L KDG+L R+A A Sbjct: 103 KLSRPPDQRKALLRGLTTQLLKYGRIKTTRPRAKAMRKYVEKMITLAKDGSLHKRRQALA 162 Query: 227 FVRGDDVVHKLFTELAYRYKDRAGGYTRLLRTRIRIGDAAPMAYIEFV 370 F+ +VH LF E+A RY +R GGYTR++ T R GD APMAYIE V Sbjct: 163 FIYEKHIVHALFAEVADRYGEREGGYTRIIPTFPRRGDNAPMAYIELV 210
>AK102431:Os02g0644100 | Length = 578 Score = 31.2 bits (69), Expect = 0.88 Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 9/76 (11%) Frame = +2 Query: 287 DRAGGYTRLLRTRIRIGDAAP--MAYIE--FVDRENE-----LREAKPATPPPPQRVPLD 439 D A GY+RL + +GDAA AY + +D NE L +AK A PP+R P Sbjct: 68 DWAKGYSRLGAAHLGLGDAASAVAAYEKGLALDPTNEGLKAGLADAKKAAAAPPRRPP-- 125 Query: 440 PWAKSRASQQWAGPKV 487 P Q + GP++ Sbjct: 126 PSGVDGIGQMFQGPEL 141
>Os01g0965500:Os01g0965500 | Length = 385 Score = 27.3 bits (59), Expect(2) = 0.98 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = +3 Query: 498 PNQKAYESTICTMFLTGE*EYPFCLCNS-DQARGLSCRRIFAS 623 P +AYEST C + +GE + LC+ D+ R C R A+ Sbjct: 60 PVARAYESTRCDVCGSGERDEELLLCDGCDRGRHTFCLRPIAA 102 Score = 22.3 bits (46), Expect(2) = 0.98 Identities = 8/13 (61%), Positives = 9/13 (69%) Frame = +2 Query: 383 ELREAKPATPPPP 421 ELR + A PPPP Sbjct: 24 ELRRKRTAAPPPP 36
>Os08g0119300:Os08g0119300 | Length = 411 Score = 29.6 bits (65), Expect = 2.6 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = +2 Query: 359 IEFVDRENELREAKPATPPPPQRVPLDPWAK 451 +E D E A+PPPP V L PW K Sbjct: 163 VESADLETHESVGTAASPPPPPPVALTPWEK 193
>AK110490: | Length = 1049 Score = 29.3 bits (64), Expect = 3.4 Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 6/126 (4%) Frame = +2 Query: 77 SMLRTMVSQLVKHERIETTVAKAKEVRRKADQMVQLGKDGTLDAARRASAFVRGDDVVHK 256 SM + V V + T++ + KEV + +MV L K G A + V DD + + Sbjct: 402 SMQESSVRSSVASPKGSTSI-REKEVYADSVEMVNLSKGGVAAAGTTVTVSVLRDDEIQQ 460 Query: 257 LFTELAYRYKDRAGGYTRLLRTRIRIGD----AAPMAYIEFVDRE--NELREAKPATPPP 418 + + + +T + ++R I + A Y + N+ + + + PPP Sbjct: 461 ID-----EHGNPIPQHTTVSKSRASISERSVSGASETYSGLAKKSSLNKRPDPRSSLPPP 515 Query: 419 PQRVPL 436 P VPL Sbjct: 516 PVVVPL 521
>AK101529:Os05g0389600 | Length = 549 Score = 29.3 bits (64), Expect = 3.4 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = +2 Query: 404 ATPPPPQRVPLDPWAKSRASQQWAGPKVTVNPKSE 508 ++PPPP R P P+ S+ + + P + KSE Sbjct: 76 SSPPPPPRPPRRPFESSKGEENGSLPSIAQMDKSE 110
>AK063930:Os04g0505400 | Length = 559 Score = 29.3 bits (64), Expect = 3.4 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +2 Query: 341 AAPMAYIEFVDRENELREAKPATPPPPQRVPLDPWAKSR 457 + PM + V R + LR TPPPP R+ L W+ R Sbjct: 325 SGPMLHCLDVFRRSLLRAGLQPTPPPPARLWLKKWSGLR 363
>AK111826:Os07g0618400 | Length = 732 Score = 28.9 bits (63), Expect = 4.4 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 4/41 (9%) Frame = +2 Query: 401 PATPPPPQRVP--LDPWAKSRASQQWAGPKVTV--NPKSEG 511 P+ PPPP + P P KS S+Q A P TV NP +G Sbjct: 256 PSPPPPPYQSPPYKSPPYKSPQSRQPAPPTTTVNNNPSDDG 296
>AK111671:Os07g0618400 | Length = 732 Score = 28.9 bits (63), Expect = 4.4 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 4/41 (9%) Frame = +2 Query: 401 PATPPPPQRVP--LDPWAKSRASQQWAGPKVTV--NPKSEG 511 P+ PPPP + P P KS S+Q A P TV NP +G Sbjct: 256 PSPPPPPYQSPPYKSPPYKSPQSRQPAPPTTTVNNNPSDDG 296
>AK099302:Os03g0586800 | Length = 602 Score = 28.9 bits (63), Expect = 4.4 Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%) Frame = -1 Query: 430 NPLRRWWRCRFGLSE-FVLSVNKLNVCH 350 +PL +W R R GL+E F L VNK VC+ Sbjct: 495 SPLAKWHRSRPGLTERFELFVNKHEVCN 522
>AK071000:Os08g0293100 | Length = 132 Score = 28.9 bits (63), Expect = 4.4 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +2 Query: 335 GDAAPMAYIEFVDRENELREAKPATPPPPQRVPLD 439 G+A P Y+ F R A P PPPP +P+D Sbjct: 99 GEAQPFKYMAFSAR----LPASPPPPPPPTALPVD 129
>AK063765:Os03g0586800 | Length = 602 Score = 28.9 bits (63), Expect = 4.4 Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%) Frame = -1 Query: 430 NPLRRWWRCRFGLSE-FVLSVNKLNVCH 350 +PL +W R R GL+E F L VNK VC+ Sbjct: 495 SPLAKWHRSRPGLTERFELFVNKHEVCN 522
>Os03g0193700:Os03g0193700 | Length = 162 Score = 28.5 bits (62), Expect = 5.7 Identities = 20/55 (36%), Positives = 23/55 (41%) Frame = +2 Query: 290 RAGGYTRLLRTRIRIGDAAPMAYIEFVDRENELREAKPATPPPPQRVPLDPWAKS 454 R G T L RIR+ +AA I+ EA A PP Q P P A S Sbjct: 19 RKSGRTLLRARRIRLSEAATTCPIDATADGRPAAEATRARHPPWQAQPHSPVASS 73
>Os02g0468500:Os02g0468500 | Length = 693 Score = 28.5 bits (62), Expect = 5.7 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = +2 Query: 344 APMAYIEFVDRENELREAKPATPPPPQRVPLDPWAKSR 457 AP+ +I + + R A P+ PPPP +P P + R Sbjct: 386 APLPWISPLHYRSPTRAAPPSPPPPPPPLPEAPLTQLR 423
>AK102989:Os09g0495200 | Length = 322 Score = 28.5 bits (62), Expect = 5.7 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = +2 Query: 410 PPPPQRVPLDPWAKSRASQQWAGPKVTV 493 PPPP RV + K R S++W K + Sbjct: 126 PPPPPRVEVQSVRKRRMSEEWEALKAAI 153
>AK099675:Os10g0561500 | Length = 782 Score = 28.5 bits (62), Expect = 5.7 Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%) Frame = +2 Query: 59 HAAHRVSMLRTMVSQLVKHERIETTVAKA--KEVRRKADQMVQLGKDGTLDAARRASAFV 232 H R++ + T + + +++ +A A KEV KA M+ K+ + A+ V Sbjct: 49 HVLQRITTVPTPMGNYIPIDKVRADIASAYVKEVECKARTMLLFYKNMCDEKAKAEVLVV 108 Query: 233 RGDDVVHKL 259 +G+DV + Sbjct: 109 KGEDVAETI 117
>AK064970:Os01g0585600 | Length = 685 Score = 28.5 bits (62), Expect = 5.7 Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 24/83 (28%) Frame = +2 Query: 266 ELAYRYKDRAGGYTRLLRTRIRIGDAAPMAYIE-----------FVDRENELREAKPA-- 406 E R KDR +L+R R+ + AA AY++ F + E+ L + PA Sbjct: 12 EAVRRCKDRRKLMKQLMRRRVELA-AAQTAYLQSLRNTGATLRQFAEVESALSQQPPAGI 70 Query: 407 -----------TPPPPQRVPLDP 442 PPPP VP+ P Sbjct: 71 AVHPSPPPPPPPPPPPPPVPVPP 93
>AK061038:Os10g0521900 | Length = 338 Score = 28.5 bits (62), Expect = 5.7 Identities = 12/31 (38%), Positives = 15/31 (48%) Frame = -1 Query: 397 GLSEFVLSVNKLNVCHWCSITYSYPSSQKSC 305 GLS VN CHWC P+S+ +C Sbjct: 306 GLSMLFRGVNANERCHWCHYLSCIPTSRWTC 336
>AK119839: | Length = 276 Score = 28.1 bits (61), Expect = 7.5 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = +2 Query: 395 AKPATPPPPQRVPLDPWAKS 454 A P PPPP+ PL P AKS Sbjct: 109 ANPKVPPPPKIEPLKPKAKS 128
>AY341855:Os01g0665500 | Length = 580 Score = 28.1 bits (61), Expect = 7.5 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = -1 Query: 109 HQLRHHRPEHGHAVRGVAPEL 47 HQL HH HGH G+AP L Sbjct: 453 HQLHHHHGHHGH--HGMAPPL 471
>AY341844:Os01g0665500 | Length = 565 Score = 28.1 bits (61), Expect = 7.5 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = -1 Query: 109 HQLRHHRPEHGHAVRGVAPEL 47 HQL HH HGH G+AP L Sbjct: 438 HQLHHHHGHHGH--HGMAPPL 456
>AK073401:Os12g0152800 | Length = 239 Score = 28.1 bits (61), Expect = 7.5 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +2 Query: 371 DRENELREAKPATPPPPQRVPLDPWAKSRASQQ 469 D EN +RE + R LD W+K RASQ+ Sbjct: 204 DAENIIREKRKIKMNAVHRKTLDDWSKYRASQK 236
>AK072885:Os12g0152800 | Length = 239 Score = 28.1 bits (61), Expect = 7.5 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +2 Query: 371 DRENELREAKPATPPPPQRVPLDPWAKSRASQQ 469 D EN +RE + R LD W+K RASQ+ Sbjct: 204 DAENIIREKRKIKMNAVHRKTLDDWSKYRASQK 236
>AK071572:Os12g0152800 | Length = 239 Score = 28.1 bits (61), Expect = 7.5 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +2 Query: 371 DRENELREAKPATPPPPQRVPLDPWAKSRASQQ 469 D EN +RE + R LD W+K RASQ+ Sbjct: 204 DAENIIREKRKIKMNAVHRKTLDDWSKYRASQK 236
>AK066736:Os03g0330000 | Length = 631 Score = 28.1 bits (61), Expect = 7.5 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = +2 Query: 395 AKPATPPPPQRVPLDPWAKS 454 A P PPPP+ PL P AKS Sbjct: 109 ANPKVPPPPKIEPLKPKAKS 128
>AK120897:Os04g0624900 | Length = 138 Score = 27.7 bits (60), Expect = 9.8 Identities = 20/57 (35%), Positives = 23/57 (40%) Frame = +2 Query: 296 GGYTRLLRTRIRIGDAAPMAYIEFVDRENELREAKPATPPPPQRVPLDPWAKSRASQ 466 GG R LR R R G+ AP R P PPP R P W K +A + Sbjct: 62 GGVPRHLRLRRR-GEVAPQ-------HPRPRRRRAPHPRPPPPRPPPLSWEKKQARE 110
>AK120595:Os06g0489500 | Length = 1590 Score = 27.7 bits (60), Expect = 9.8 Identities = 15/71 (21%), Positives = 36/71 (50%), Gaps = 7/71 (9%) Frame = +2 Query: 56 RHAAHRVSMLRTMV-------SQLVKHERIETTVAKAKEVRRKADQMVQLGKDGTLDAAR 214 R+ +R S L++ V +Q+ +H+ ++ V + RR+++++ + D T + +R Sbjct: 592 RYIENRASSLQSSVKTTSDTRTQVDQHDEVDQQVVALTDSRRRSEKLTDIKMDSTSNVSR 651 Query: 215 RASAFVRGDDV 247 + D+V Sbjct: 652 TSLKQRNSDEV 662
>AK107461:Os01g0274800 | Length = 205 Score = 27.7 bits (60), Expect = 9.8 Identities = 14/37 (37%), Positives = 17/37 (45%) Frame = +2 Query: 395 AKPATPPPPQRVPLDPWAKSRASQQWAGPKVTVNPKS 505 A P PPPP R P A + A+ P T +P S Sbjct: 132 AAPRPPPPPPRRRTSPAASTSAAAPKPPPTATPSPSS 168
>AK069486:Os05g0514200 | Length = 508 Score = 27.7 bits (60), Expect = 9.8 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +2 Query: 371 DRENELREAKPATPPPPQRVPLDP 442 D +N++ E +P+ PPPP P P Sbjct: 312 DGDNDMPELEPSEPPPPPPFPPPP 335
>AK066778:Os05g0514200 | Length = 508 Score = 27.7 bits (60), Expect = 9.8 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +2 Query: 371 DRENELREAKPATPPPPQRVPLDP 442 D +N++ E +P+ PPPP P P Sbjct: 312 DGDNDMPELEPSEPPPPPPFPPPP 335
>AK066041:Os01g0116400 | Length = 677 Score = 27.7 bits (60), Expect = 9.8 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = +2 Query: 230 VRGDDVVHKLFTELAYRYKDRAGGYTRLLRTRIRIGDAAPMAYIEFV 370 V +DVV + A R+ R+GG+ LR I + P Y FV Sbjct: 217 VNYEDVVRSMSEGFAVRFPFRSGGFIDCLRGLISDSNGEPTVYRIFV 263 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 23,732,216 Number of extensions: 560100 Number of successful extensions: 2764 Number of sequences better than 10.0: 34 Number of HSP's gapped: 2719 Number of HSP's successfully gapped: 36 Length of query: 269 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 170 Effective length of database: 11,435,796 Effective search space: 1944085320 Effective search space used: 1944085320 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
