Clone Name | FLbaf96k17 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_001051287.1| Oryza sativa (japonica cultivar-group) Os01g0839300 (Os01g0839300) mRNA, complete cds Length = 789 Score = 515 bits (260), Expect = e-143 Identities = 404/452 (89%) Strand = Plus / Plus Query: 29 gccatgggcaagttccgcaagctcgggcgccacgccgcgcaccgcgtgtccatgctcagg 88 |||||||| ||||||||||||||||| ||||||||||| ||||| || |||||||||||| Sbjct: 78 gccatggggaagttccgcaagctcggccgccacgccgcccaccgagtatccatgctcagg 137 Query: 89 acgatggtgtcgcagctggtgaagcacgagcgcatcgagaccaccgtcgccaaggcgaag 148 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 138 acgatggtgtcgcagctcgtgaagcacgagcgaatcgagaccaccgtcgccaaggcgaag 197 Query: 149 gaggtgcggcgcaaggcggatcagatggtgcagctcggcaaagatggtacactggatgca 208 |||||||||||||||||||||||||||||||||||||| ||||| || ||| |||||||| Sbjct: 198 gaggtgcggcgcaaggcggatcagatggtgcagctcgggaaagagggcacattggatgca 257 Query: 209 gcaagacgtgcttctgcttttgttcgtggagatgatgttgtccataagctattcacagag 268 |||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||| Sbjct: 258 gcaagacgtgcttctgcttttgttcggggagatgatgttgttcataagctatttacagag 317 Query: 269 ctggcctaccgctataaagatcgagcaggcggatatacaagacttttgcgaactaggata 328 || |||||||| || || | ||||| || || || || ||||| ||||||||||||||| Sbjct: 318 ctagcctaccgttacaagaaccgagctggtgggtacaccagactattgcgaactaggata 377 Query: 329 cgaataggtgatgctgcaccaatggcatacattgagtttgttgacagagagaacgaactc 388 ||| | |||||||||||||| ||||||||||||||||| ||||| || || || ||||| Sbjct: 378 cgagttggtgatgctgcaccgatggcatacattgagttcgttgatagggaaaatgaactt 437 Query: 389 cgagaggccaaacctgcaacgccaccaccgcctcagcgggttccacttgatccatgggcc 448 ||||| |||||||||||||| |||| || ||||| ||| ||| |||||||| |||||| Sbjct: 438 cgagaagccaaacctgcaacaccacagccacctcaacggtctcctcttgatccctgggcc 497 Query: 449 aaatctcgtgctagccagcaatgggcgggacc 480 || |||||||||||||| || ||||||||||| Sbjct: 498 aagtctcgtgctagccaacagtgggcgggacc 529
>dbj|AK064685.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-D07, full insert sequence Length = 789 Score = 515 bits (260), Expect = e-143 Identities = 404/452 (89%) Strand = Plus / Plus Query: 29 gccatgggcaagttccgcaagctcgggcgccacgccgcgcaccgcgtgtccatgctcagg 88 |||||||| ||||||||||||||||| ||||||||||| ||||| || |||||||||||| Sbjct: 78 gccatggggaagttccgcaagctcggccgccacgccgcccaccgagtatccatgctcagg 137 Query: 89 acgatggtgtcgcagctggtgaagcacgagcgcatcgagaccaccgtcgccaaggcgaag 148 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 138 acgatggtgtcgcagctcgtgaagcacgagcgaatcgagaccaccgtcgccaaggcgaag 197 Query: 149 gaggtgcggcgcaaggcggatcagatggtgcagctcggcaaagatggtacactggatgca 208 |||||||||||||||||||||||||||||||||||||| ||||| || ||| |||||||| Sbjct: 198 gaggtgcggcgcaaggcggatcagatggtgcagctcgggaaagagggcacattggatgca 257 Query: 209 gcaagacgtgcttctgcttttgttcgtggagatgatgttgtccataagctattcacagag 268 |||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||| Sbjct: 258 gcaagacgtgcttctgcttttgttcggggagatgatgttgttcataagctatttacagag 317 Query: 269 ctggcctaccgctataaagatcgagcaggcggatatacaagacttttgcgaactaggata 328 || |||||||| || || | ||||| || || || || ||||| ||||||||||||||| Sbjct: 318 ctagcctaccgttacaagaaccgagctggtgggtacaccagactattgcgaactaggata 377 Query: 329 cgaataggtgatgctgcaccaatggcatacattgagtttgttgacagagagaacgaactc 388 ||| | |||||||||||||| ||||||||||||||||| ||||| || || || ||||| Sbjct: 378 cgagttggtgatgctgcaccgatggcatacattgagttcgttgatagggaaaatgaactt 437 Query: 389 cgagaggccaaacctgcaacgccaccaccgcctcagcgggttccacttgatccatgggcc 448 ||||| |||||||||||||| |||| || ||||| ||| ||| |||||||| |||||| Sbjct: 438 cgagaagccaaacctgcaacaccacagccacctcaacggtctcctcttgatccctgggcc 497 Query: 449 aaatctcgtgctagccagcaatgggcgggacc 480 || |||||||||||||| || ||||||||||| Sbjct: 498 aagtctcgtgctagccaacagtgggcgggacc 529
>emb|CT831722.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI015H11, full insert sequence Length = 800 Score = 500 bits (252), Expect = e-138 Identities = 402/452 (88%) Strand = Plus / Plus Query: 29 gccatgggcaagttccgcaagctcgggcgccacgccgcgcaccgcgtgtccatgctcagg 88 |||||||| ||||||||||||||||| ||||||||||| ||||| || |||||||||||| Sbjct: 73 gccatggggaagttccgcaagctcggccgccacgccgcccaccgagtatccatgctcagg 132 Query: 89 acgatggtgtcgcagctggtgaagcacgagcgcatcgagaccaccgtcgccaaggcgaag 148 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 133 acgatggtgtcgcagctcgtgaagcacgagcgaatcgagaccaccgtcgccaaggcgaag 192 Query: 149 gaggtgcggcgcaaggcggatcagatggtgcagctcggcaaagatggtacactggatgca 208 |||||||||||||||||||||||||||||||||||||| ||||| || ||| |||||||| Sbjct: 193 gaggtgcggcgcaaggcggatcagatggtgcagctcgggaaagagggcacattggatgca 252 Query: 209 gcaagacgtgcttctgcttttgttcgtggagatgatgttgtccataagctattcacagag 268 ||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||||| Sbjct: 253 gcaagacgtgcctctgcttttgttcggggagatgatgttgttcataagctatttacagag 312 Query: 269 ctggcctaccgctataaagatcgagcaggcggatatacaagacttttgcgaactaggata 328 || || ||||| || || | ||||| || || || || ||||| ||||||||||||||| Sbjct: 313 ctagcgtaccgttacaagaaccgagctggtgggtacaccagactattgcgaactaggata 372 Query: 329 cgaataggtgatgctgcaccaatggcatacattgagtttgttgacagagagaacgaactc 388 ||| | |||||||||||||| ||||||||||||||||| ||||| || || || ||||| Sbjct: 373 cgagttggtgatgctgcaccgatggcatacattgagttcgttgatagggaaaatgaactt 432 Query: 389 cgagaggccaaacctgcaacgccaccaccgcctcagcgggttccacttgatccatgggcc 448 ||||| |||||||||||||| |||| || ||||| ||| ||| |||||||| |||||| Sbjct: 433 cgagaagccaaacctgcaacaccacagccacctcaacggtctcctcttgatccctgggcc 492 Query: 449 aaatctcgtgctagccagcaatgggcgggacc 480 || |||||||||||||| || ||||||||||| Sbjct: 493 aagtctcgtgctagccaacagtgggcgggacc 524
>gb|DQ245857.1| Zea mays clone 20924 mRNA sequence Length = 910 Score = 385 bits (194), Expect = e-103 Identities = 350/402 (87%) Strand = Plus / Plus Query: 79 catgctcaggacgatggtgtcgcagctggtgaagcacgagcgcatcgagaccaccgtcgc 138 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150 catgctcaggacgatggtgtcgcagctggtgaagcacgagcgcatcgagaccaccgtcgc 209 Query: 139 caaggcgaaggaggtgcggcgcaaggcggatcagatggtgcagctcggcaaagatggtac 198 ||||||||||||||| ||||| ||||||||||||||||||||||| || || || ||||| Sbjct: 210 caaggcgaaggaggttcggcggaaggcggatcagatggtgcagctagggaaggagggtac 269 Query: 199 actggatgcagcaagacgtgcttctgcttttgttcgtggagatgatgttgtccataagct 258 | | ||||||||||||||||| |||| |||||||| || |||||||| || |||||||| Sbjct: 270 tcagcatgcagcaagacgtgctgctgcctttgttcggggtgatgatgtcgttcataagct 329 Query: 259 attcacagagctggcctaccgctataaagatcgagcaggcggatatacaagacttttgcg 318 ||| || |||||||||| |||||| | ||||||||| || || || |||||| | || | Sbjct: 330 atttactgagctggccttccgctacagagatcgagctgggggctacacaagaatgttaag 389 Query: 319 aactaggatacgaataggtgatgctgcaccaatggcatacattgagtttgttgacagaga 378 ||| |||||||| | ||||||||||| |||||||||||||| ||||| || ||||| || Sbjct: 390 aaccaggatacgtgttggtgatgctgctccaatggcatacatcgagttcgtggacaggga 449 Query: 379 gaacgaactccgagaggccaaacctgcaacgccaccaccgcctcagcgggttccacttga 438 ||| || || ||||||||||||||||||||||| || |||||||| || | || ||||| Sbjct: 450 gaatgagcttcgagaggccaaacctgcaacgccgccgccgcctcaacgagcccctcttga 509 Query: 439 tccatgggccaaatctcgtgctagccagcaatgggcgggacc 480 |||||||||||| || ||||||||||| || ||||| ||||| Sbjct: 510 tccatgggccaagtcacgtgctagccaacagtgggcaggacc 551
>ref|NM_001062293.1| Oryza sativa (japonica cultivar-group) Os05g0460700 (Os05g0460700) mRNA, complete cds Length = 734 Score = 377 bits (190), Expect = e-101 Identities = 310/350 (88%) Strand = Plus / Plus Query: 15 cccccgccgccgacgccatgggcaagttccgcaagctcgggcgccacgccgcgcaccgcg 74 ||||| |||||| ||||||||| |||||||||||||| || ||||||||||| ||||||| Sbjct: 64 ccccctccgccgccgccatggggaagttccgcaagctgggccgccacgccgcccaccgcg 123 Query: 75 tgtccatgctcaggacgatggtgtcgcagctggtgaagcacgagcgcatcgagaccaccg 134 | |||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 124 tctccatgctcaggactatggtgtcgcagctggtgaagcatgagcggatcgagaccaccg 183 Query: 135 tcgccaaggcgaaggaggtgcggcgcaaggcggatcagatggtgcagctcggcaaagatg 194 |||| |||||||||||||||||| || ||||||||||||||||||||||||||||| | Sbjct: 184 tcgcgaaggcgaaggaggtgcggacgaaagcggatcagatggtgcagctcggcaaagagg 243 Query: 195 gtacactggatgcagcaagacgtgcttctgcttttgttcgtggagatgatgttgtccata 254 |||| || ||||||||||||||||| || || |||||||| || || ||||||| || | Sbjct: 244 gtacgcttgatgcagcaagacgtgcctcagcctttgttcggggtgacaatgttgttcaca 303 Query: 255 agctattcacagagctggcctaccgctataaagatcgagcaggcggatatacaagacttt 314 || |||||||||| || ||||||||||| ||||||||||| || |||||||||||||| Sbjct: 304 agttattcacagaactcgcctaccgctacaaagatcgagctggtggatatacaagactac 363 Query: 315 tgcgaactaggatacgaataggtgatgctgcaccaatggcatacattgag 364 |||| ||||||||||| | || ||||||||||||||||||||||||||| Sbjct: 364 tgcggactaggatacgggttggcgatgctgcaccaatggcatacattgag 413 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Plus Query: 364 gtttgttgacagagagaacgaactccgagaggccaaacctgcaacgccaccaccgcctca 423 |||||| ||| | ||||| ||||| |||||||| ||||||||||| |||| || ||||| Sbjct: 466 gtttgtcgaccgggagaatgaacttcgagaggcaaaacctgcaacaccacagccacctca 525 Query: 424 gcgggttccacttgatccatgggccaa 450 |||||| || |||||||||||| |||| Sbjct: 526 gcgggtccctcttgatccatggaccaa 552
>dbj|AK103320.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125I20, full insert sequence Length = 735 Score = 377 bits (190), Expect = e-101 Identities = 310/350 (88%) Strand = Plus / Plus Query: 15 cccccgccgccgacgccatgggcaagttccgcaagctcgggcgccacgccgcgcaccgcg 74 ||||| |||||| ||||||||| |||||||||||||| || ||||||||||| ||||||| Sbjct: 65 ccccctccgccgccgccatggggaagttccgcaagctgggccgccacgccgcccaccgcg 124 Query: 75 tgtccatgctcaggacgatggtgtcgcagctggtgaagcacgagcgcatcgagaccaccg 134 | |||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 125 tctccatgctcaggactatggtgtcgcagctggtgaagcatgagcggatcgagaccaccg 184 Query: 135 tcgccaaggcgaaggaggtgcggcgcaaggcggatcagatggtgcagctcggcaaagatg 194 |||| |||||||||||||||||| || ||||||||||||||||||||||||||||| | Sbjct: 185 tcgcgaaggcgaaggaggtgcggacgaaagcggatcagatggtgcagctcggcaaagagg 244 Query: 195 gtacactggatgcagcaagacgtgcttctgcttttgttcgtggagatgatgttgtccata 254 |||| || ||||||||||||||||| || || |||||||| || || ||||||| || | Sbjct: 245 gtacgcttgatgcagcaagacgtgcctcagcctttgttcggggtgacaatgttgttcaca 304 Query: 255 agctattcacagagctggcctaccgctataaagatcgagcaggcggatatacaagacttt 314 || |||||||||| || ||||||||||| ||||||||||| || |||||||||||||| Sbjct: 305 agttattcacagaactcgcctaccgctacaaagatcgagctggtggatatacaagactac 364 Query: 315 tgcgaactaggatacgaataggtgatgctgcaccaatggcatacattgag 364 |||| ||||||||||| | || ||||||||||||||||||||||||||| Sbjct: 365 tgcggactaggatacgggttggcgatgctgcaccaatggcatacattgag 414 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Plus Query: 364 gtttgttgacagagagaacgaactccgagaggccaaacctgcaacgccaccaccgcctca 423 |||||| ||| | ||||| ||||| |||||||| ||||||||||| |||| || ||||| Sbjct: 467 gtttgtcgaccgggagaatgaacttcgagaggcaaaacctgcaacaccacagccacctca 526 Query: 424 gcgggttccacttgatccatgggccaa 450 |||||| || |||||||||||| |||| Sbjct: 527 gcgggtccctcttgatccatggaccaa 553
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 125 bits (63), Expect = 3e-25 Identities = 75/79 (94%) Strand = Plus / Plus Query: 201 tggatgcagcaagacgtgcttctgcttttgttcgtggagatgatgttgtccataagctat 260 |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 36001969 tggatgcagcaagacgtgcttctgcttttgttcggggagatgatgttgttcataagctat 36002028 Query: 261 tcacagagctggcctaccg 279 | |||||||| |||||||| Sbjct: 36002029 ttacagagctagcctaccg 36002047 Score = 101 bits (51), Expect = 4e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 85 caggacgatggtgtcgcagctggtgaagcacgagcgcatcgagaccaccgtcgccaagg 143 ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 36000882 caggacgatggtgtcgcagctcgtgaagcacgagcgaatcgagaccaccgtcgccaagg 36000940 Score = 95.6 bits (48), Expect = 2e-16 Identities = 51/52 (98%) Strand = Plus / Plus Query: 141 aggcgaaggaggtgcggcgcaaggcggatcagatggtgcagctcggcaaaga 192 |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 36001034 aggcgaaggaggtgcggcgcaaggcggatcagatggtgcagctcgggaaaga 36001085 Score = 83.8 bits (42), Expect = 9e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 308 agacttttgcgaactaggatacgaataggtgatgctgcaccaatggcatacattgagt 365 ||||| |||||||||||||||||| | |||||||||||||| |||||||||||||||| Sbjct: 36002323 agactattgcgaactaggatacgagttggtgatgctgcaccgatggcatacattgagt 36002380 Score = 83.8 bits (42), Expect = 9e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 383 gaactccgagaggccaaacctgcaacgccaccaccgcctcagcgggttccacttgatcca 442 ||||| ||||| |||||||||||||| |||| || ||||| ||| ||| |||||||| Sbjct: 36002797 gaacttcgagaagccaaacctgcaacaccacagccacctcaacggtctcctcttgatccc 36002856 Query: 443 tgggccaaatctcgtgctagccagcaatgggcgggacc 480 |||||||| |||||||||||||| || ||||||||||| Sbjct: 36002857 tgggccaagtctcgtgctagccaacagtgggcgggacc 36002894 Score = 79.8 bits (40), Expect = 1e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 29 gccatgggcaagttccgcaagctcgggcgccacgccgcgcaccgcgtgtccatgctcagg 88 |||||||| ||||||||||||||||| ||||||||||| ||||| || |||||||||||| Sbjct: 36000738 gccatggggaagttccgcaagctcggccgccacgccgcccaccgagtatccatgctcagg 36000797
>dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408C03 Length = 141273 Score = 125 bits (63), Expect = 3e-25 Identities = 75/79 (94%) Strand = Plus / Plus Query: 201 tggatgcagcaagacgtgcttctgcttttgttcgtggagatgatgttgtccataagctat 260 |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 14694 tggatgcagcaagacgtgcttctgcttttgttcggggagatgatgttgttcataagctat 14753 Query: 261 tcacagagctggcctaccg 279 | |||||||| |||||||| Sbjct: 14754 ttacagagctagcctaccg 14772 Score = 101 bits (51), Expect = 4e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 85 caggacgatggtgtcgcagctggtgaagcacgagcgcatcgagaccaccgtcgccaagg 143 ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 13607 caggacgatggtgtcgcagctcgtgaagcacgagcgaatcgagaccaccgtcgccaagg 13665 Score = 95.6 bits (48), Expect = 2e-16 Identities = 51/52 (98%) Strand = Plus / Plus Query: 141 aggcgaaggaggtgcggcgcaaggcggatcagatggtgcagctcggcaaaga 192 |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 13759 aggcgaaggaggtgcggcgcaaggcggatcagatggtgcagctcgggaaaga 13810 Score = 83.8 bits (42), Expect = 9e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 308 agacttttgcgaactaggatacgaataggtgatgctgcaccaatggcatacattgagt 365 ||||| |||||||||||||||||| | |||||||||||||| |||||||||||||||| Sbjct: 15048 agactattgcgaactaggatacgagttggtgatgctgcaccgatggcatacattgagt 15105 Score = 83.8 bits (42), Expect = 9e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 383 gaactccgagaggccaaacctgcaacgccaccaccgcctcagcgggttccacttgatcca 442 ||||| ||||| |||||||||||||| |||| || ||||| ||| ||| |||||||| Sbjct: 15522 gaacttcgagaagccaaacctgcaacaccacagccacctcaacggtctcctcttgatccc 15581 Query: 443 tgggccaaatctcgtgctagccagcaatgggcgggacc 480 |||||||| |||||||||||||| || ||||||||||| Sbjct: 15582 tgggccaagtctcgtgctagccaacagtgggcgggacc 15619 Score = 79.8 bits (40), Expect = 1e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 29 gccatgggcaagttccgcaagctcgggcgccacgccgcgcaccgcgtgtccatgctcagg 88 |||||||| ||||||||||||||||| ||||||||||| ||||| || |||||||||||| Sbjct: 13463 gccatggggaagttccgcaagctcggccgccacgccgcccaccgagtatccatgctcagg 13522
>dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D11 Length = 138108 Score = 125 bits (63), Expect = 3e-25 Identities = 75/79 (94%) Strand = Plus / Plus Query: 201 tggatgcagcaagacgtgcttctgcttttgttcgtggagatgatgttgtccataagctat 260 |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 100647 tggatgcagcaagacgtgcttctgcttttgttcggggagatgatgttgttcataagctat 100706 Query: 261 tcacagagctggcctaccg 279 | |||||||| |||||||| Sbjct: 100707 ttacagagctagcctaccg 100725 Score = 101 bits (51), Expect = 4e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 85 caggacgatggtgtcgcagctggtgaagcacgagcgcatcgagaccaccgtcgccaagg 143 ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 99560 caggacgatggtgtcgcagctcgtgaagcacgagcgaatcgagaccaccgtcgccaagg 99618 Score = 95.6 bits (48), Expect = 2e-16 Identities = 51/52 (98%) Strand = Plus / Plus Query: 141 aggcgaaggaggtgcggcgcaaggcggatcagatggtgcagctcggcaaaga 192 |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 99712 aggcgaaggaggtgcggcgcaaggcggatcagatggtgcagctcgggaaaga 99763 Score = 83.8 bits (42), Expect = 9e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 308 agacttttgcgaactaggatacgaataggtgatgctgcaccaatggcatacattgagt 365 ||||| |||||||||||||||||| | |||||||||||||| |||||||||||||||| Sbjct: 101001 agactattgcgaactaggatacgagttggtgatgctgcaccgatggcatacattgagt 101058 Score = 83.8 bits (42), Expect = 9e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 383 gaactccgagaggccaaacctgcaacgccaccaccgcctcagcgggttccacttgatcca 442 ||||| ||||| |||||||||||||| |||| || ||||| ||| ||| |||||||| Sbjct: 101475 gaacttcgagaagccaaacctgcaacaccacagccacctcaacggtctcctcttgatccc 101534 Query: 443 tgggccaaatctcgtgctagccagcaatgggcgggacc 480 |||||||| |||||||||||||| || ||||||||||| Sbjct: 101535 tgggccaagtctcgtgctagccaacagtgggcgggacc 101572 Score = 79.8 bits (40), Expect = 1e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 29 gccatgggcaagttccgcaagctcgggcgccacgccgcgcaccgcgtgtccatgctcagg 88 |||||||| ||||||||||||||||| ||||||||||| ||||| || |||||||||||| Sbjct: 99416 gccatggggaagttccgcaagctcggccgccacgccgcccaccgagtatccatgctcagg 99475
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05, complete sequence Length = 163130 Score = 91.7 bits (46), Expect = 4e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 15 cccccgccgccgacgccatgggcaagttccgcaagctcgggcgccacgccgcgcaccgcg 74 ||||| |||||| ||||||||| |||||||||||||| || ||||||||||| ||||||| Sbjct: 76686 ccccctccgccgccgccatggggaagttccgcaagctgggccgccacgccgcccaccgcg 76627 Query: 75 tgtccatgctcagg 88 | |||||||||||| Sbjct: 76626 tctccatgctcagg 76613 Score = 87.7 bits (44), Expect = 6e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 286 agatcgagcaggcggatatacaagacttttgcgaactaggatacgaataggtgatgctgc 345 ||||||||| || |||||||||||||| |||| ||||||||||| | || |||||||| Sbjct: 75416 agatcgagctggtggatatacaagactactgcggactaggatacgggttggcgatgctgc 75357 Query: 346 accaatggcatacattgagt 365 |||||||||||||||||||| Sbjct: 75356 accaatggcatacattgagt 75337 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 85 caggacgatggtgtcgcagctggtgaagcacgagcgcatcgagaccaccgtcgccaagg 143 |||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 76477 caggactatggtgtcgcagctggtgaagcatgagcggatcgagaccaccgtcgcgaagg 76419 Score = 71.9 bits (36), Expect = 3e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 141 aggcgaaggaggtgcggcgcaaggcggatcagatggtgcagctcggcaaaga 192 ||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 76291 aggcgaaggaggtgcggacgaaagcggatcagatggtgcagctcggcaaaga 76240 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Minus Query: 364 gtttgttgacagagagaacgaactccgagaggccaaacctgcaacgccaccaccgcctca 423 |||||| ||| | ||||| ||||| |||||||| ||||||||||| |||| || ||||| Sbjct: 74855 gtttgtcgaccgggagaatgaacttcgagaggcaaaacctgcaacaccacagccacctca 74796 Query: 424 gcgggttccacttgatccatgggccaa 450 |||||| || |||||||||||| |||| Sbjct: 74795 gcgggtccctcttgatccatggaccaa 74769 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 194 ggtacactggatgcagcaagacgtgcttctgcttttgttcgtggagatgatgttgtccat 253 ||||| || ||||||||||||||||| || || |||||||| || || ||||||| || Sbjct: 75636 ggtacgcttgatgcagcaagacgtgcctcagcctttgttcggggtgacaatgttgttcac 75577 Query: 254 aagctattcacagagctggcctaccgcta 282 ||| |||||||||| || ||||||||||| Sbjct: 75576 aagttattcacagaactcgcctaccgcta 75548
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 91.7 bits (46), Expect = 4e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 15 cccccgccgccgacgccatgggcaagttccgcaagctcgggcgccacgccgcgcaccgcg 74 ||||| |||||| ||||||||| |||||||||||||| || ||||||||||| ||||||| Sbjct: 22487279 ccccctccgccgccgccatggggaagttccgcaagctgggccgccacgccgcccaccgcg 22487220 Query: 75 tgtccatgctcagg 88 | |||||||||||| Sbjct: 22487219 tctccatgctcagg 22487206 Score = 87.7 bits (44), Expect = 6e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 286 agatcgagcaggcggatatacaagacttttgcgaactaggatacgaataggtgatgctgc 345 ||||||||| || |||||||||||||| |||| ||||||||||| | || |||||||| Sbjct: 22486009 agatcgagctggtggatatacaagactactgcggactaggatacgggttggcgatgctgc 22485950 Query: 346 accaatggcatacattgagt 365 |||||||||||||||||||| Sbjct: 22485949 accaatggcatacattgagt 22485930 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 85 caggacgatggtgtcgcagctggtgaagcacgagcgcatcgagaccaccgtcgccaagg 143 |||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 22487070 caggactatggtgtcgcagctggtgaagcatgagcggatcgagaccaccgtcgcgaagg 22487012 Score = 71.9 bits (36), Expect = 3e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 141 aggcgaaggaggtgcggcgcaaggcggatcagatggtgcagctcggcaaaga 192 ||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 22486884 aggcgaaggaggtgcggacgaaagcggatcagatggtgcagctcggcaaaga 22486833 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Minus Query: 364 gtttgttgacagagagaacgaactccgagaggccaaacctgcaacgccaccaccgcctca 423 |||||| ||| | ||||| ||||| |||||||| ||||||||||| |||| || ||||| Sbjct: 22485448 gtttgtcgaccgggagaatgaacttcgagaggcaaaacctgcaacaccacagccacctca 22485389 Query: 424 gcgggttccacttgatccatgggccaa 450 |||||| || |||||||||||| |||| Sbjct: 22485388 gcgggtccctcttgatccatggaccaa 22485362 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 194 ggtacactggatgcagcaagacgtgcttctgcttttgttcgtggagatgatgttgtccat 253 ||||| || ||||||||||||||||| || || |||||||| || || ||||||| || Sbjct: 22486229 ggtacgcttgatgcagcaagacgtgcctcagcctttgttcggggtgacaatgttgttcac 22486170 Query: 254 aagctattcacagagctggcctaccgcta 282 ||| |||||||||| || ||||||||||| Sbjct: 22486169 aagttattcacagaactcgcctaccgcta 22486141
>gb|AY022792.1| Oryza sativa microsatellite MRG5117 containing (CGC)X8, genomic sequence Length = 224 Score = 79.8 bits (40), Expect = 1e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 29 gccatgggcaagttccgcaagctcgggcgccacgccgcgcaccgcgtgtccatgctcagg 88 |||||||| ||||||||||||||||| ||||||||||| ||||| || |||||||||||| Sbjct: 146 gccatggggaagttccgcaagctcggccgccacgccgcccaccgagtatccatgctcagg 205
>dbj|AK228114.1| Arabidopsis thaliana mRNA for ribsomal protein - like, complete cds, clone: RAFL14-59-G19 Length = 738 Score = 61.9 bits (31), Expect = 3e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 75 tgtccatgctcaggacgatggtgtcgcagctggtgaagcacgagcgcatcgagaccaccg 134 |||||||||| ||||| ||||| || ||| |||||||||||||||| || |||||||| | Sbjct: 68 tgtccatgcttaggactatggtttctcagttggtgaagcacgagcgtattgagaccactg 127 Query: 135 tcgccaaggcgaaggaggt 153 || | ||||| || ||||| Sbjct: 128 tcactaaggctaaagaggt 146 Score = 58.0 bits (29), Expect = 5e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 284 aaagatcgagcaggcggatatacaagacttttgcgaactaggatacgaataggtgatgct 343 |||||| |||| || ||||| |||||||| | || ||| | |||||| | ||||||||| Sbjct: 277 aaagatagagctggtggatacacaagactgctacgtactcgcatacgagttggtgatgct 336 Query: 344 gcaccaatggcatacattgagtttgttgacagagagaacga 384 || || ||||| || || |||||| |||||||||||||||| Sbjct: 337 gctcctatggcctatatcgagtttattgacagagagaacga 377
>ref|NM_121014.2| Arabidopsis thaliana structural constituent of ribosome (AT5G09770) mRNA, complete cds Length = 728 Score = 61.9 bits (31), Expect = 3e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 75 tgtccatgctcaggacgatggtgtcgcagctggtgaagcacgagcgcatcgagaccaccg 134 |||||||||| ||||| ||||| || ||| |||||||||||||||| || |||||||| | Sbjct: 68 tgtccatgcttaggactatggtttctcagttggtgaagcacgagcgtattgagaccactg 127 Query: 135 tcgccaaggcgaaggaggt 153 || | ||||| || ||||| Sbjct: 128 tcactaaggctaaagaggt 146 Score = 58.0 bits (29), Expect = 5e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 284 aaagatcgagcaggcggatatacaagacttttgcgaactaggatacgaataggtgatgct 343 |||||| |||| || ||||| |||||||| | || ||| | |||||| | ||||||||| Sbjct: 277 aaagatagagctggtggatacacaagactgctacgtactcgcatacgagttggtgatgct 336 Query: 344 gcaccaatggcatacattgagtttgttgacagagagaacga 384 || || ||||| || || |||||| |||||||||||||||| Sbjct: 337 gctcctatggcctatatcgagtttattgacagagagaacga 377
>gb|AY086225.1| Arabidopsis thaliana clone 22697 mRNA, complete sequence Length = 725 Score = 61.9 bits (31), Expect = 3e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 75 tgtccatgctcaggacgatggtgtcgcagctggtgaagcacgagcgcatcgagaccaccg 134 |||||||||| ||||| ||||| || ||| |||||||||||||||| || |||||||| | Sbjct: 68 tgtccatgcttaggactatggtttctcagttggtgaagcacgagcgtattgagaccactg 127 Query: 135 tcgccaaggcgaaggaggt 153 || | ||||| || ||||| Sbjct: 128 tcactaaggctaaagaggt 146 Score = 58.0 bits (29), Expect = 5e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 284 aaagatcgagcaggcggatatacaagacttttgcgaactaggatacgaataggtgatgct 343 |||||| |||| || ||||| |||||||| | || ||| | |||||| | ||||||||| Sbjct: 277 aaagatagagctggtggatacacaagactgctacgtactcgcatacgagttggtgatgct 336 Query: 344 gcaccaatggcatacattgagtttgttgacagagagaacga 384 || || ||||| || || |||||| |||||||||||||||| Sbjct: 337 gctcctatggcctatatcgagtttattgacagagagaacga 377
>gb|BT003108.1| Arabidopsis thaliana At5g09770 mRNA, complete cds Length = 483 Score = 61.9 bits (31), Expect = 3e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 75 tgtccatgctcaggacgatggtgtcgcagctggtgaagcacgagcgcatcgagaccaccg 134 |||||||||| ||||| ||||| || ||| |||||||||||||||| || |||||||| | Sbjct: 44 tgtccatgcttaggactatggtttctcagttggtgaagcacgagcgtattgagaccactg 103 Query: 135 tcgccaaggcgaaggaggt 153 || | ||||| || ||||| Sbjct: 104 tcactaaggctaaagaggt 122 Score = 58.0 bits (29), Expect = 5e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 284 aaagatcgagcaggcggatatacaagacttttgcgaactaggatacgaataggtgatgct 343 |||||| |||| || ||||| |||||||| | || ||| | |||||| | ||||||||| Sbjct: 253 aaagatagagctggtggatacacaagactgctacgtactcgcatacgagttggtgatgct 312 Query: 344 gcaccaatggcatacattgagtttgttgacagagagaacga 384 || || ||||| || || |||||| |||||||||||||||| Sbjct: 313 gctcctatggcctatatcgagtttattgacagagagaacga 353
>emb|BX832882.1|CNS0A21B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL19ZG09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 636 Score = 61.9 bits (31), Expect = 3e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 75 tgtccatgctcaggacgatggtgtcgcagctggtgaagcacgagcgcatcgagaccaccg 134 |||||||||| ||||| ||||| || ||| |||||||||||||||| || |||||||| | Sbjct: 16 tgtccatgcttaggactatggtttctcagttggtgaagcacgagcgtattgagaccactg 75 Query: 135 tcgccaaggcgaaggaggt 153 || | ||||| || ||||| Sbjct: 76 tcactaaggctaaagaggt 94 Score = 58.0 bits (29), Expect = 5e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 284 aaagatcgagcaggcggatatacaagacttttgcgaactaggatacgaataggtgatgct 343 |||||| |||| || ||||| |||||||| | || ||| | |||||| | ||||||||| Sbjct: 225 aaagatagagctggtggatacacaagactgctacgtactcgcatacgagttggtgatgct 284 Query: 344 gcaccaatggcatacattgagtttgttgacagagagaacga 384 || || ||||| || || |||||| |||||||||||||||| Sbjct: 285 gctcctatggcctatatcgagtttattgacagagagaacga 325
>emb|BX832861.1|CNS0A22N Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL18ZB06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 707 Score = 60.0 bits (30), Expect = 1e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 75 tgtccatgctcaggacgatggtgtcgcagctggtgaagcacgagcgcatcgagaccac 132 |||||||||| ||||| ||||| || ||| |||||||||||||||| || |||||||| Sbjct: 40 tgtccatgcttaggactatggtttctcagttggtgaagcacgagcgtattgagaccac 97 Score = 58.0 bits (29), Expect = 5e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 284 aaagatcgagcaggcggatatacaagacttttgcgaactaggatacgaataggtgatgct 343 |||||| |||| || ||||| |||||||| | || ||| | |||||| | ||||||||| Sbjct: 250 aaagatagagctggtggatacacaagactgctacgtactcgcatacgagttggtgatgct 309 Query: 344 gcaccaatggcatacattgagtttgttgacagagagaacga 384 || || ||||| || || |||||| |||||||||||||||| Sbjct: 310 gctcctatggcctatatcgagtttattgacagagagaacga 350
>gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete genome Length = 686194 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 343 tgcaccaatggcatacattgagtttgttga 372 ||||||||||||||| |||||||||||||| Sbjct: 364364 tgcaccaatggcatatattgagtttgttga 364393
>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome Length = 1913428 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 343 tgcaccaatggcatacattgagtttgttga 372 |||||||||||||||||||||||| ||||| Sbjct: 917775 tgcaccaatggcatacattgagttagttga 917804
>dbj|AB020752.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTH16 Length = 68098 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 83 ctcaggacgatggtgtcgcagctggtgaagcacgagcgcatcgagaccac 132 |||||||| ||||| || ||| |||||||||||||||| || |||||||| Sbjct: 57243 ctcaggactatggtttctcagttggtgaagcacgagcgtattgagaccac 57194
>gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome Length = 1830138 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 343 tgcaccaatggcatacattgagtttgttga 372 |||||||||||||||||||||||| ||||| Sbjct: 853429 tgcaccaatggcatacattgagttagttga 853458
>emb|AL353994.1|ATF17I14 Arabidopsis thaliana DNA chromosome 5, BAC clone F17I14 (ESSA project) Length = 92491 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Plus Query: 83 ctcaggacgatggtgtcgcagctggtgaagcacgagcgcatcgagaccac 132 |||||||| ||||| || ||| |||||||||||||||| || |||||||| Sbjct: 12341 ctcaggactatggtttctcagttggtgaagcacgagcgtattgagaccac 12390
>emb|CT009568.8| M.truncatula DNA sequence from clone MTH2-95K22 on chromosome 3, complete sequence Length = 121926 Score = 46.1 bits (23), Expect = 0.19 Identities = 29/31 (93%) Strand = Plus / Plus Query: 335 ggtgatgctgcaccaatggcatacattgagt 365 |||||||||||||||||||| || ||||||| Sbjct: 18928 ggtgatgctgcaccaatggcctatattgagt 18958
>emb|BX061381.1|CNS09JIX Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC42AF07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 851 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Plus Query: 104 ctggtgaagcacgagcgcatcga 126 ||||||||||||||||||||||| Sbjct: 260 ctggtgaagcacgagcgcatcga 282
>emb|BX060210.1|CNS09IME Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC40CA03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 824 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Minus Query: 104 ctggtgaagcacgagcgcatcga 126 ||||||||||||||||||||||| Sbjct: 514 ctggtgaagcacgagcgcatcga 492
>emb|BX060209.1|CNS09IMD Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC40CA03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 604 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Plus Query: 104 ctggtgaagcacgagcgcatcga 126 ||||||||||||||||||||||| Sbjct: 26 ctggtgaagcacgagcgcatcga 48
>gb|AC143340.4| Medicago truncatula clone mth2-7f4, complete sequence Length = 114535 Score = 46.1 bits (23), Expect = 0.19 Identities = 29/31 (93%) Strand = Plus / Minus Query: 335 ggtgatgctgcaccaatggcatacattgagt 365 |||||||||||||||||||| || ||||||| Sbjct: 1109 ggtgatgctgcaccaatggcctatattgagt 1079
>emb|BX019804.1|CNS08NG0 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA3AH03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 676 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Minus Query: 104 ctggtgaagcacgagcgcatcga 126 ||||||||||||||||||||||| Sbjct: 576 ctggtgaagcacgagcgcatcga 554
>emb|BX019803.1|CNS08NFZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA3AH03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 834 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Plus Query: 104 ctggtgaagcacgagcgcatcga 126 ||||||||||||||||||||||| Sbjct: 215 ctggtgaagcacgagcgcatcga 237
>ref|XM_321202.2| Anopheles gambiae str. PEST ENSANGP00000020872 (ENSANGG00000018383), partial mRNA Length = 528 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Plus Query: 104 ctggtgaagcacgagcgcatcga 126 ||||||||||||||||||||||| Sbjct: 130 ctggtgaagcacgagcgcatcga 152
>emb|AL772303.11| Mouse DNA sequence from clone RP23-185P20 on chromosome 2, complete sequence Length = 202001 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Plus Query: 558 tatccattttgtttgtgtaactc 580 ||||||||||||||||||||||| Sbjct: 147643 tatccattttgtttgtgtaactc 147665
>gb|CP000481.1| Acidothermus cellulolyticus 11B, complete genome Length = 2443540 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Plus Query: 158 cgcaaggcggatcagatggtgc 179 |||||||||||||||||||||| Sbjct: 315365 cgcaaggcggatcagatggtgc 315386
>gb|BT025732.1| Arabidopsis thaliana At5g64650 mRNA, complete cds Length = 483 Score = 44.1 bits (22), Expect = 0.77 Identities = 49/58 (84%) Strand = Plus / Plus Query: 75 tgtccatgctcaggacgatggtgtcgcagctggtgaagcacgagcgcatcgagaccac 132 |||||||||||||||| ||||| || || ||||| | |||||||| || |||||||| Sbjct: 44 tgtccatgctcaggactatggtttctcaattggtgcaacacgagcgaattgagaccac 101 Score = 44.1 bits (22), Expect = 0.77 Identities = 43/50 (86%) Strand = Plus / Plus Query: 335 ggtgatgctgcaccaatggcatacattgagtttgttgacagagagaacga 384 ||||||||||| |||||||| || || |||||| | || ||||||||||| Sbjct: 304 ggtgatgctgccccaatggcctatatcgagtttatcgatagagagaacga 353
>ref|NM_125861.2| Arabidopsis thaliana structural constituent of ribosome (AT5G64650) mRNA, complete cds Length = 699 Score = 44.1 bits (22), Expect = 0.77 Identities = 49/58 (84%) Strand = Plus / Plus Query: 75 tgtccatgctcaggacgatggtgtcgcagctggtgaagcacgagcgcatcgagaccac 132 |||||||||||||||| ||||| || || ||||| | |||||||| || |||||||| Sbjct: 78 tgtccatgctcaggactatggtttctcaattggtgcaacacgagcgaattgagaccac 135 Score = 44.1 bits (22), Expect = 0.77 Identities = 43/50 (86%) Strand = Plus / Plus Query: 335 ggtgatgctgcaccaatggcatacattgagtttgttgacagagagaacga 384 ||||||||||| |||||||| || || |||||| | || ||||||||||| Sbjct: 338 ggtgatgctgccccaatggcctatatcgagtttatcgatagagagaacga 387
>gb|AE006177.1| Pasteurella multocida subsp. multocida str. Pm70 section 144 of 204 of the complete genome Length = 14087 Score = 44.1 bits (22), Expect = 0.77 Identities = 25/26 (96%) Strand = Plus / Minus Query: 347 ccaatggcatacattgagtttgttga 372 |||||||||||||||||||| ||||| Sbjct: 225 ccaatggcatacattgagttagttga 200
>gb|AE005770.1| Caulobacter crescentus CB15 section 96 of 359 of the complete genome Length = 11274 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Plus Query: 5 ggccgctcagcccccgccgccg 26 |||||||||||||||||||||| Sbjct: 10862 ggccgctcagcccccgccgccg 10883
>emb|AL365220.24| Human DNA sequence from clone RP4-735N21 on chromosome 1p21.2-22.2 Contains a novel pseudogene, complete sequence Length = 113028 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Plus Query: 723 gtataatgaaatgtttgaagaa 744 |||||||||||||||||||||| Sbjct: 69653 gtataatgaaatgtttgaagaa 69674
>gb|AY086818.1| Arabidopsis thaliana clone 2806 mRNA, complete sequence Length = 677 Score = 44.1 bits (22), Expect = 0.77 Identities = 49/58 (84%) Strand = Plus / Plus Query: 75 tgtccatgctcaggacgatggtgtcgcagctggtgaagcacgagcgcatcgagaccac 132 |||||||||||||||| ||||| || || ||||| | |||||||| || |||||||| Sbjct: 78 tgtccatgctcaggactatggtttctcaattggtgcaacacgagcgaattgagaccac 135 Score = 44.1 bits (22), Expect = 0.77 Identities = 43/50 (86%) Strand = Plus / Plus Query: 335 ggtgatgctgcaccaatggcatacattgagtttgttgacagagagaacga 384 ||||||||||| |||||||| || || |||||| | || ||||||||||| Sbjct: 338 ggtgatgctgccccaatggcctatatcgagtttatcgatagagagaacga 387
>dbj|AK118268.1| Arabidopsis thaliana At5g64650 mRNA for putative 50S ribosomal protein L17, complete cds, clone: RAFL19-56-H21 Length = 653 Score = 44.1 bits (22), Expect = 0.77 Identities = 49/58 (84%) Strand = Plus / Plus Query: 75 tgtccatgctcaggacgatggtgtcgcagctggtgaagcacgagcgcatcgagaccac 132 |||||||||||||||| ||||| || || ||||| | |||||||| || |||||||| Sbjct: 32 tgtccatgctcaggactatggtttctcaattggtgcaacacgagcgaattgagaccac 89 Score = 44.1 bits (22), Expect = 0.77 Identities = 43/50 (86%) Strand = Plus / Plus Query: 335 ggtgatgctgcaccaatggcatacattgagtttgttgacagagagaacga 384 ||||||||||| |||||||| || || |||||| | || ||||||||||| Sbjct: 292 ggtgatgctgccccaatggcctatatcgagtttatcgatagagagaacga 341
>emb|AM260479.1| Ralstonia eutropha H16 chromosome 1 Length = 4052032 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 50 ctcgggcgccacgccgcgcaccgcg 74 |||||||| |||||||||||||||| Sbjct: 489076 ctcgggcggcacgccgcgcaccgcg 489052
>emb|CR848708.12| Wallaby DNA sequence from clone MEKBa-201B9, complete sequence Length = 194524 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 cagcccccgccgccgacgccatggg 36 ||||||||||||||| ||||||||| Sbjct: 107933 cagcccccgccgccgccgccatggg 107957
>gb|AC019235.6| Homo sapiens BAC clone RP11-665C14 from 4, complete sequence Length = 196680 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 725 ataatgaaatgtttgaagaat 745 ||||||||||||||||||||| Sbjct: 4415 ataatgaaatgtttgaagaat 4435
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 tcagcccccgccgccgacgcc 31 ||||||||||||||||||||| Sbjct: 3431548 tcagcccccgccgccgacgcc 3431528
>gb|AC093326.3| Homo sapiens BAC clone RP11-625N16 from 2, complete sequence Length = 188711 Score = 42.1 bits (21), Expect = 3.0 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 239 gatgatgttgtccata-agctattcacag 266 |||||||||||||||| |||||||||||| Sbjct: 106419 gatgatgttgtccatagagctattcacag 106391
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 3.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 2 gccggccgctcagcccccgccgccgacgccatg 34 |||||| |||| || |||||||||||||||||| Sbjct: 2891621 gccggcggctcggcacccgccgccgacgccatg 2891653 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 125,940,692 Number of extensions: 6504780 Number of successful extensions: 131771 Number of sequences better than 10.0: 46 Number of HSP's gapped: 131768 Number of HSP's successfully gapped: 83 Length of query: 808 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 786 Effective length of database: 18,508,616,841 Effective search space: 14547772837026 Effective search space used: 14547772837026 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)