ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf96k15 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ890139.1| Triticum turgidum subsp. durum mRNA for dehydrin (dhn29b gene) Length = 785 Score = 739 bits (373), Expect = 0.0 Identities = 448/473 (94%) Strand = Plus / Plus Query: 102 catggcgcagctgatcgacaaggccaaggggttcgtggcggagacggtatcgggggtgca 161 |||||||||| | || |||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 88 catggcgcagttaatggacaaggccaaggggttcgtggcggagaagatatcgggggtgca 147 Query: 162 gaagccggaggcggacctgtcggacatgtcggtgcagcacgtcgggcgcgacggcgccac 221 ||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 148 gaaaccggaggcggacctgtcggacctgtcggtgcagcacgtcggccgcgacggcgccac 207 Query: 222 cctgtccggccgcctcgacgtgcgcaacccctactcacacaccatccccatctgcgagat 281 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 208 cctgtccggccgcctcgacgtgcgcaacccctactcgcacaccatccccatctgcgagat 267 Query: 282 cagctactccctcaagagcgccggccgcgaagtcgcctccgggacgatgccggacccggg 341 |||||||||| |||| |||||||||||||| || ||||||||||| |||||||||||||| Sbjct: 268 cagctactccttcaaaagcgccggccgcgacgtggcctccgggaccatgccggacccggg 327 Query: 342 gtcgctggtggccagcgacaccaccagcctccacatacccgtgaaggtgccctacgactt 401 ||||||||||||||||||||||||| ||||| ||||||| ||||||||||| |||||||| Sbjct: 328 gtcgctggtggccagcgacaccaccggcctcgacataccggtgaaggtgccgtacgactt 387 Query: 402 ccttgtgagcctgatgaaggacgccgggaaggactgggacctcgactacgagatgcgcgt 461 ||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 388 cctgatgagcctggtgaaggacgccggcaaggactgggacctcgactacgagatgcgcgt 447 Query: 462 aggcctcaccatcgacctccccatcgtcggcaacttcacgctgccgctcaccaaggccgg 521 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 cggcctcaccgtcgacctccccatcgtcggcaacttcacgctgccgctcaccaaggccgg 507 Query: 522 cgagctcaagctccccacgctctccgacctcttctaaacttaccgccgcaccc 574 ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 508 cgagctcaagctccccacgctctccgacctcttttaaacttaccgccgcaccc 560 Score = 77.8 bits (39), Expect = 5e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 581 gcgggacgatcgatcgctacctagctctgtttttacttc 619 ||||||||||||||||||||||||||||||||||||||| Sbjct: 643 gcgggacgatcgatcgctacctagctctgtttttacttc 681 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 644 tagctctgtttttacttgggatcacggtgtgggtgtgc 681 ||||||||||||||||| ||||| |||||||||||||| Sbjct: 664 tagctctgtttttacttcggatcgcggtgtgggtgtgc 701 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 695 tgtatttctagacttctacgtgaataaaataa 726 ||||||||||||||| |||||||||||||||| Sbjct: 736 tgtatttctagacttttacgtgaataaaataa 767
>emb|CT829063.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI031I04, full insert sequence Length = 620 Score = 327 bits (165), Expect = 3e-86 Identities = 384/457 (84%) Strand = Plus / Plus Query: 103 atggcgcagctgatcgacaaggccaaggggttcgtggcggagacggtatcgggggtgcag 162 |||||||||||| | |||||||| ||||||||||||||||| | ||| || ||||| || Sbjct: 73 atggcgcagctggtggacaaggcgaaggggttcgtggcggacaaggtggcgcgggtggag 132 Query: 163 aagccggaggcggacctgtcggacatgtcggtgcagcacgtcgggcgcgacggcgccacc 222 |||||||||||||| ||| | || ||||| | ||| ||| || |||| |||||||||| Sbjct: 133 aagccggaggcggagctggccgagctgtcgttccagagcgtgggccgcggcggcgccacc 192 Query: 223 ctgtccggccgcctcgacgtgcgcaacccctactcacacaccatccccatctgcgagatc 282 || | || ||| | |||||||||||||||||||| ||| ||||||| ||||||||| | Sbjct: 193 ctcgcggggcgcgtggacgtgcgcaacccctactcccactccatcccgatctgcgaggtg 252 Query: 283 agctactccctcaagagcgccggccgcgaagtcgcctccgggacgatgccggacccgggg 342 |||||||| || ||||||||||| | || || || || ||||||||||| ||||||||| Sbjct: 253 agctactcgctgaagagcgccgggagggaggtggcgtcggggacgatgcccgacccgggg 312 Query: 343 tcgctggtggccagcgacaccaccagcctccacatacccgtgaaggtgccctacgacttc 402 ||||| ||| |||||||||| | || |||| || ||||||||||| ||||||||| Sbjct: 313 tcgctcaccgccggcgacaccacgcggctggacatcccggtgaaggtgccgtacgacttc 372 Query: 403 cttgtgagcctgatgaaggacgccgggaaggactgggacctcgactacgagatgcgcgta 462 || |||||||| | ||||||||| | |||||||||| |||||||||||||| | || Sbjct: 373 ctggtgagcctcgccagggacgccggcagggactgggacatcgactacgagatgagggtc 432 Query: 463 ggcctcaccatcgacctccccatcgtcggcaacttcacgctgccgctcaccaaggccggc 522 ||||||||| |||||||||||||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 433 ggcctcaccgtcgacctccccatcctcggcaacttcaccctgccgctcaccaagtccggc 492 Query: 523 gagctcaagctccccacgctctccgacctcttctaaa 559 ||||||||||||||||| ||||||||| ||||||||| Sbjct: 493 gagctcaagctccccaccctctccgacgtcttctaaa 529
>dbj|AK242089.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075140N08, full insert sequence Length = 1148 Score = 327 bits (165), Expect = 3e-86 Identities = 384/457 (84%) Strand = Plus / Minus Query: 103 atggcgcagctgatcgacaaggccaaggggttcgtggcggagacggtatcgggggtgcag 162 |||||||||||| | |||||||| ||||||||||||||||| | ||| || ||||| || Sbjct: 499 atggcgcagctggtggacaaggcgaaggggttcgtggcggacaaggtggcgcgggtggag 440 Query: 163 aagccggaggcggacctgtcggacatgtcggtgcagcacgtcgggcgcgacggcgccacc 222 |||||||||||||| ||| | || ||||| | ||| ||| || |||| |||||||||| Sbjct: 439 aagccggaggcggagctggccgagctgtcgttccagagcgtgggccgcggcggcgccacc 380 Query: 223 ctgtccggccgcctcgacgtgcgcaacccctactcacacaccatccccatctgcgagatc 282 || | || ||| | |||||||||||||||||||| ||| ||||||| ||||||||| | Sbjct: 379 ctcgcggggcgcgtggacgtgcgcaacccctactcccactccatcccgatctgcgaggtg 320 Query: 283 agctactccctcaagagcgccggccgcgaagtcgcctccgggacgatgccggacccgggg 342 |||||||| || ||||||||||| | || || || || ||||||||||| ||||||||| Sbjct: 319 agctactcgctgaagagcgccgggagggaggtggcgtcggggacgatgcccgacccgggg 260 Query: 343 tcgctggtggccagcgacaccaccagcctccacatacccgtgaaggtgccctacgacttc 402 ||||| ||| |||||||||| | || |||| || ||||||||||| ||||||||| Sbjct: 259 tcgctcaccgccggcgacaccacgcggctggacatcccggtgaaggtgccgtacgacttc 200 Query: 403 cttgtgagcctgatgaaggacgccgggaaggactgggacctcgactacgagatgcgcgta 462 || |||||||| | ||||||||| | |||||||||| |||||||||||||| | || Sbjct: 199 ctggtgagcctcgccagggacgccggcagggactgggacatcgactacgagatgagggtc 140 Query: 463 ggcctcaccatcgacctccccatcgtcggcaacttcacgctgccgctcaccaaggccggc 522 ||||||||| |||||||||||||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 139 ggcctcaccgtcgacctccccatcctcggcaacttcaccctgccgctcaccaagtccggc 80 Query: 523 gagctcaagctccccacgctctccgacctcttctaaa 559 ||||||||||||||||| ||||||||| ||||||||| Sbjct: 79 gagctcaagctccccaccctctccgacgtcttctaaa 43
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 327 bits (165), Expect = 3e-86 Identities = 384/457 (84%) Strand = Plus / Minus Query: 103 atggcgcagctgatcgacaaggccaaggggttcgtggcggagacggtatcgggggtgcag 162 |||||||||||| | |||||||| ||||||||||||||||| | ||| || ||||| || Sbjct: 6921687 atggcgcagctggtggacaaggcgaaggggttcgtggcggacaaggtggcgcgggtggag 6921628 Query: 163 aagccggaggcggacctgtcggacatgtcggtgcagcacgtcgggcgcgacggcgccacc 222 |||||||||||||| ||| | || ||||| | ||| ||| || |||| |||||||||| Sbjct: 6921627 aagccggaggcggagctggccgagctgtcgttccagagcgtgggccgcggcggcgccacc 6921568 Query: 223 ctgtccggccgcctcgacgtgcgcaacccctactcacacaccatccccatctgcgagatc 282 || | || ||| | |||||||||||||||||||| ||| ||||||| ||||||||| | Sbjct: 6921567 ctcgcggggcgcgtggacgtgcgcaacccctactcccactccatcccgatctgcgaggtg 6921508 Query: 283 agctactccctcaagagcgccggccgcgaagtcgcctccgggacgatgccggacccgggg 342 |||||||| || ||||||||||| | || || || || ||||||||||| ||||||||| Sbjct: 6921507 agctactcgctgaagagcgccgggagggaggtggcgtcggggacgatgcccgacccgggg 6921448 Query: 343 tcgctggtggccagcgacaccaccagcctccacatacccgtgaaggtgccctacgacttc 402 ||||| ||| |||||||||| | || |||| || ||||||||||| ||||||||| Sbjct: 6921447 tcgctcaccgccggcgacaccacgcggctggacatcccggtgaaggtgccgtacgacttc 6921388 Query: 403 cttgtgagcctgatgaaggacgccgggaaggactgggacctcgactacgagatgcgcgta 462 || |||||||| | ||||||||| | |||||||||| |||||||||||||| | || Sbjct: 6921387 ctggtgagcctcgccagggacgccggcagggactgggacatcgactacgagatgagggtc 6921328 Query: 463 ggcctcaccatcgacctccccatcgtcggcaacttcacgctgccgctcaccaaggccggc 522 ||||||||| |||||||||||||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 6921327 ggcctcaccgtcgacctccccatcctcggcaacttcaccctgccgctcaccaagtccggc 6921268 Query: 523 gagctcaagctccccacgctctccgacctcttctaaa 559 ||||||||||||||||| ||||||||| ||||||||| Sbjct: 6921267 gagctcaagctccccaccctctccgacgtcttctaaa 6921231 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 246 caacccctactcacacaccatccccatctgcgagatcagctactccctcaagagcg 301 |||||||||||| ||| |||||||||||||||| ||| |||| || ||||||||| Sbjct: 24929240 caacccctactcgcaccgcatccccatctgcgagctcacctacaccttcaagagcg 24929295 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Plus Query: 467 tcaccatcgacctccccatcgtcggcaacttcac 500 ||||||||||||||||| ||||||||| |||||| Sbjct: 24929585 tcaccatcgacctccccgtcgtcggcagcttcac 24929618 Score = 48.1 bits (24), Expect = 0.048 Identities = 27/28 (96%) Strand = Plus / Plus Query: 118 gacaaggccaaggggttcgtggcggaga 145 |||| ||||||||||||||||||||||| Sbjct: 24929112 gacagggccaaggggttcgtggcggaga 24929139
>dbj|AP002902.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492F05 Length = 159242 Score = 327 bits (165), Expect = 3e-86 Identities = 384/457 (84%) Strand = Plus / Minus Query: 103 atggcgcagctgatcgacaaggccaaggggttcgtggcggagacggtatcgggggtgcag 162 |||||||||||| | |||||||| ||||||||||||||||| | ||| || ||||| || Sbjct: 89411 atggcgcagctggtggacaaggcgaaggggttcgtggcggacaaggtggcgcgggtggag 89352 Query: 163 aagccggaggcggacctgtcggacatgtcggtgcagcacgtcgggcgcgacggcgccacc 222 |||||||||||||| ||| | || ||||| | ||| ||| || |||| |||||||||| Sbjct: 89351 aagccggaggcggagctggccgagctgtcgttccagagcgtgggccgcggcggcgccacc 89292 Query: 223 ctgtccggccgcctcgacgtgcgcaacccctactcacacaccatccccatctgcgagatc 282 || | || ||| | |||||||||||||||||||| ||| ||||||| ||||||||| | Sbjct: 89291 ctcgcggggcgcgtggacgtgcgcaacccctactcccactccatcccgatctgcgaggtg 89232 Query: 283 agctactccctcaagagcgccggccgcgaagtcgcctccgggacgatgccggacccgggg 342 |||||||| || ||||||||||| | || || || || ||||||||||| ||||||||| Sbjct: 89231 agctactcgctgaagagcgccgggagggaggtggcgtcggggacgatgcccgacccgggg 89172 Query: 343 tcgctggtggccagcgacaccaccagcctccacatacccgtgaaggtgccctacgacttc 402 ||||| ||| |||||||||| | || |||| || ||||||||||| ||||||||| Sbjct: 89171 tcgctcaccgccggcgacaccacgcggctggacatcccggtgaaggtgccgtacgacttc 89112 Query: 403 cttgtgagcctgatgaaggacgccgggaaggactgggacctcgactacgagatgcgcgta 462 || |||||||| | ||||||||| | |||||||||| |||||||||||||| | || Sbjct: 89111 ctggtgagcctcgccagggacgccggcagggactgggacatcgactacgagatgagggtc 89052 Query: 463 ggcctcaccatcgacctccccatcgtcggcaacttcacgctgccgctcaccaaggccggc 522 ||||||||| |||||||||||||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 89051 ggcctcaccgtcgacctccccatcctcggcaacttcaccctgccgctcaccaagtccggc 88992 Query: 523 gagctcaagctccccacgctctccgacctcttctaaa 559 ||||||||||||||||| ||||||||| ||||||||| Sbjct: 88991 gagctcaagctccccaccctctccgacgtcttctaaa 88955
>dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E07 Length = 159440 Score = 327 bits (165), Expect = 3e-86 Identities = 384/457 (84%) Strand = Plus / Minus Query: 103 atggcgcagctgatcgacaaggccaaggggttcgtggcggagacggtatcgggggtgcag 162 |||||||||||| | |||||||| ||||||||||||||||| | ||| || ||||| || Sbjct: 43505 atggcgcagctggtggacaaggcgaaggggttcgtggcggacaaggtggcgcgggtggag 43446 Query: 163 aagccggaggcggacctgtcggacatgtcggtgcagcacgtcgggcgcgacggcgccacc 222 |||||||||||||| ||| | || ||||| | ||| ||| || |||| |||||||||| Sbjct: 43445 aagccggaggcggagctggccgagctgtcgttccagagcgtgggccgcggcggcgccacc 43386 Query: 223 ctgtccggccgcctcgacgtgcgcaacccctactcacacaccatccccatctgcgagatc 282 || | || ||| | |||||||||||||||||||| ||| ||||||| ||||||||| | Sbjct: 43385 ctcgcggggcgcgtggacgtgcgcaacccctactcccactccatcccgatctgcgaggtg 43326 Query: 283 agctactccctcaagagcgccggccgcgaagtcgcctccgggacgatgccggacccgggg 342 |||||||| || ||||||||||| | || || || || ||||||||||| ||||||||| Sbjct: 43325 agctactcgctgaagagcgccgggagggaggtggcgtcggggacgatgcccgacccgggg 43266 Query: 343 tcgctggtggccagcgacaccaccagcctccacatacccgtgaaggtgccctacgacttc 402 ||||| ||| |||||||||| | || |||| || ||||||||||| ||||||||| Sbjct: 43265 tcgctcaccgccggcgacaccacgcggctggacatcccggtgaaggtgccgtacgacttc 43206 Query: 403 cttgtgagcctgatgaaggacgccgggaaggactgggacctcgactacgagatgcgcgta 462 || |||||||| | ||||||||| | |||||||||| |||||||||||||| | || Sbjct: 43205 ctggtgagcctcgccagggacgccggcagggactgggacatcgactacgagatgagggtc 43146 Query: 463 ggcctcaccatcgacctccccatcgtcggcaacttcacgctgccgctcaccaaggccggc 522 ||||||||| |||||||||||||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 43145 ggcctcaccgtcgacctccccatcctcggcaacttcaccctgccgctcaccaagtccggc 43086 Query: 523 gagctcaagctccccacgctctccgacctcttctaaa 559 ||||||||||||||||| ||||||||| ||||||||| Sbjct: 43085 gagctcaagctccccaccctctccgacgtcttctaaa 43049
>ref|NM_001048996.1| Oryza sativa (japonica cultivar-group) Os01g0225600 (Os01g0225600) mRNA, complete cds Length = 471 Score = 319 bits (161), Expect = 8e-84 Identities = 377/449 (83%) Strand = Plus / Plus Query: 103 atggcgcagctgatcgacaaggccaaggggttcgtggcggagacggtatcgggggtgcag 162 |||||||||||| | |||||||| ||||||||||||||||| | ||| || ||||| || Sbjct: 1 atggcgcagctggtggacaaggcgaaggggttcgtggcggacaaggtggcgcgggtggag 60 Query: 163 aagccggaggcggacctgtcggacatgtcggtgcagcacgtcgggcgcgacggcgccacc 222 |||||||||||||| ||| | || ||||| | ||| ||| || |||| |||||||||| Sbjct: 61 aagccggaggcggagctggccgagctgtcgttccagagcgtgggccgcggcggcgccacc 120 Query: 223 ctgtccggccgcctcgacgtgcgcaacccctactcacacaccatccccatctgcgagatc 282 || | || ||| | |||||||||||||||||||| ||| ||||||| ||||||||| | Sbjct: 121 ctcgcggggcgcgtggacgtgcgcaacccctactcccactccatcccgatctgcgaggtg 180 Query: 283 agctactccctcaagagcgccggccgcgaagtcgcctccgggacgatgccggacccgggg 342 |||||||| || ||||||||||| | || || || || ||||||||||| ||||||||| Sbjct: 181 agctactcgctgaagagcgccgggagggaggtggcgtcggggacgatgcccgacccgggg 240 Query: 343 tcgctggtggccagcgacaccaccagcctccacatacccgtgaaggtgccctacgacttc 402 ||||| ||| |||||||||| | || |||| || ||||||||||| ||||||||| Sbjct: 241 tcgctcaccgccggcgacaccacgcggctggacatcccggtgaaggtgccgtacgacttc 300 Query: 403 cttgtgagcctgatgaaggacgccgggaaggactgggacctcgactacgagatgcgcgta 462 || |||||||| | ||||||||| | |||||||||| |||||||||||||| | || Sbjct: 301 ctggtgagcctcgccagggacgccggcagggactgggacatcgactacgagatgagggtc 360 Query: 463 ggcctcaccatcgacctccccatcgtcggcaacttcacgctgccgctcaccaaggccggc 522 ||||||||| |||||||||||||| ||||||||||||| ||||||||||||||| ||||| Sbjct: 361 ggcctcaccgtcgacctccccatcctcggcaacttcaccctgccgctcaccaagtccggc 420 Query: 523 gagctcaagctccccacgctctccgacct 551 ||||||||||||||||| ||||||||||| Sbjct: 421 gagctcaagctccccaccctctccgacct 449
>dbj|AK063645.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-H06, full insert sequence Length = 745 Score = 278 bits (140), Expect = 3e-71 Identities = 299/352 (84%) Strand = Plus / Plus Query: 208 cgcgacggcgccaccctgtccggccgcctcgacgtgcgcaacccctactcacacaccatc 267 |||| |||||||||||| | || ||| | |||||||||||||||||||| ||| ||||| Sbjct: 303 cgcggcggcgccaccctcgcggggcgcgtggacgtgcgcaacccctactcccactccatc 362 Query: 268 cccatctgcgagatcagctactccctcaagagcgccggccgcgaagtcgcctccgggacg 327 || ||||||||| | |||||||| || ||||||||||| | || || || || |||||| Sbjct: 363 ccgatctgcgaggtgagctactcgctgaagagcgccgggagggaggtggcgtcggggacg 422 Query: 328 atgccggacccggggtcgctggtggccagcgacaccaccagcctccacatacccgtgaag 387 ||||| |||||||||||||| ||| |||||||||| | || |||| || |||||| Sbjct: 423 atgcccgacccggggtcgctcaccgccggcgacaccacgcggctggacatcccggtgaag 482 Query: 388 gtgccctacgacttccttgtgagcctgatgaaggacgccgggaaggactgggacctcgac 447 ||||| ||||||||||| |||||||| | ||||||||| | |||||||||| ||||| Sbjct: 483 gtgccgtacgacttcctggtgagcctcgccagggacgccggcagggactgggacatcgac 542 Query: 448 tacgagatgcgcgtaggcctcaccatcgacctccccatcgtcggcaacttcacgctgccg 507 ||||||||| | || ||||||||| |||||||||||||| ||||||||||||| |||||| Sbjct: 543 tacgagatgagggtcggcctcaccgtcgacctccccatcctcggcaacttcaccctgccg 602 Query: 508 ctcaccaaggccggcgagctcaagctccccacgctctccgacctcttctaaa 559 ||||||||| |||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 603 ctcaccaagtccggcgagctcaagctccccaccctctccgacgtcttctaaa 654
>emb|CT830092.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI029P08, full insert sequence Length = 778 Score = 81.8 bits (41), Expect = 3e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 432 ggactgggacctcgactacgagatgcgcgtaggcctcaccatcgacctccccatcgtcgg 491 |||||||||| |||||||| || | ||| ||||||||||||||||||||||||||||| Sbjct: 409 ggactgggacatcgactaccagctcgacgtcggcctcaccatcgacctccccatcgtcgg 468 Query: 492 caacttcac 500 ||||||||| Sbjct: 469 caacttcac 477 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Plus Query: 266 tccccatctgcgagatcagctactccctcaagagcgccggccgcgaagtcgcctccggga 325 |||||||||||||| ||| |||| |||||||| |||||||| || || || ||||| | Sbjct: 243 tccccatctgcgagctcacctacaccctcaagtgcgccggcaacgttgtggcgtccggca 302 Query: 326 cgatgccggacccggggt 343 ||||||| || ||||||| Sbjct: 303 cgatgcccgatccggggt 320 Score = 42.1 bits (21), Expect = 2.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 113 tgatcgacaaggccaaggggttcgtggcggaga 145 |||| |||||||| || |||||||||||||||| Sbjct: 90 tgatggacaaggcgaaagggttcgtggcggaga 122
>emb|CT830091.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI024H13, full insert sequence Length = 713 Score = 81.8 bits (41), Expect = 3e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 432 ggactgggacctcgactacgagatgcgcgtaggcctcaccatcgacctccccatcgtcgg 491 |||||||||| |||||||| || | ||| ||||||||||||||||||||||||||||| Sbjct: 383 ggactgggacatcgactaccagctcgacgtcggcctcaccatcgacctccccatcgtcgg 442 Query: 492 caacttcac 500 ||||||||| Sbjct: 443 caacttcac 451 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Plus Query: 266 tccccatctgcgagatcagctactccctcaagagcgccggccgcgaagtcgcctccggga 325 |||||||||||||| ||| |||| |||||||| |||||||| || || || ||||| | Sbjct: 217 tccccatctgcgagctcacctacaccctcaagtgcgccggcaacgttgtggcgtccggca 276 Query: 326 cgatgccggacccggggt 343 ||||||| || ||||||| Sbjct: 277 cgatgcccgatccggggt 294 Score = 42.1 bits (21), Expect = 2.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 113 tgatcgacaaggccaaggggttcgtggcggaga 145 |||| |||||||| || |||||||||||||||| Sbjct: 64 tgatggacaaggcgaaagggttcgtggcggaga 96
>emb|CT830090.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA010E11, full insert sequence Length = 709 Score = 81.8 bits (41), Expect = 3e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 432 ggactgggacctcgactacgagatgcgcgtaggcctcaccatcgacctccccatcgtcgg 491 |||||||||| |||||||| || | ||| ||||||||||||||||||||||||||||| Sbjct: 383 ggactgggacatcgactaccagctcgacgtcggcctcaccatcgacctccccatcgtcgg 442 Query: 492 caacttcac 500 ||||||||| Sbjct: 443 caacttcac 451 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Plus Query: 266 tccccatctgcgagatcagctactccctcaagagcgccggccgcgaagtcgcctccggga 325 |||||||||||||| ||| |||| |||||||| |||||||| || || || ||||| | Sbjct: 217 tccccatctgcgagctcacctacaccctcaagtgcgccggcaacgttgtggcgtccggca 276 Query: 326 cgatgccggacccggggt 343 ||||||| || ||||||| Sbjct: 277 cgatgcccgatccggggt 294 Score = 42.1 bits (21), Expect = 2.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 113 tgatcgacaaggccaaggggttcgtggcggaga 145 |||| |||||||| || |||||||||||||||| Sbjct: 64 tgatggacaaggcgaaagggttcgtggcggaga 96
>ref|NM_001062984.1| Oryza sativa (japonica cultivar-group) Os05g0584200 (Os05g0584200) mRNA, complete cds Length = 1125 Score = 81.8 bits (41), Expect = 3e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 432 ggactgggacctcgactacgagatgcgcgtaggcctcaccatcgacctccccatcgtcgg 491 |||||||||| |||||||| || | ||| ||||||||||||||||||||||||||||| Sbjct: 810 ggactgggacatcgactaccagctcgacgtcggcctcaccatcgacctccccatcgtcgg 869 Query: 492 caacttcac 500 ||||||||| Sbjct: 870 caacttcac 878 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Plus Query: 266 tccccatctgcgagatcagctactccctcaagagcgccggccgcgaagtcgcctccggga 325 |||||||||||||| ||| |||| |||||||| |||||||| || || || ||||| | Sbjct: 644 tccccatctgcgagctcacctacaccctcaagtgcgccggcaacgttgtggcgtccggca 703 Query: 326 cgatgccggacccggggt 343 ||||||| || ||||||| Sbjct: 704 cgatgcccgatccggggt 721 Score = 42.1 bits (21), Expect = 2.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 113 tgatcgacaaggccaaggggttcgtggcggaga 145 |||| |||||||| || |||||||||||||||| Sbjct: 491 tgatggacaaggcgaaagggttcgtggcggaga 523
>gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009C07, complete sequence Length = 148731 Score = 81.8 bits (41), Expect = 3e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 432 ggactgggacctcgactacgagatgcgcgtaggcctcaccatcgacctccccatcgtcgg 491 |||||||||| |||||||| || | ||| ||||||||||||||||||||||||||||| Sbjct: 3606 ggactgggacatcgactaccagctcgacgtcggcctcaccatcgacctccccatcgtcgg 3547 Query: 492 caacttcac 500 ||||||||| Sbjct: 3546 caacttcac 3538 Score = 50.1 bits (25), Expect = 0.012 Identities = 37/41 (90%) Strand = Plus / Minus Query: 266 tccccatctgcgagatcagctactccctcaagagcgccggc 306 |||||||||||||| ||| |||| |||||||| |||||||| Sbjct: 3884 tccccatctgcgagctcacctacaccctcaagtgcgccggc 3844 Score = 42.1 bits (21), Expect = 2.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 113 tgatcgacaaggccaaggggttcgtggcggaga 145 |||| |||||||| || |||||||||||||||| Sbjct: 4037 tgatggacaaggcgaaagggttcgtggcggaga 4005
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 81.8 bits (41), Expect = 3e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 432 ggactgggacctcgactacgagatgcgcgtaggcctcaccatcgacctccccatcgtcgg 491 |||||||||| |||||||| || | ||| ||||||||||||||||||||||||||||| Sbjct: 28849313 ggactgggacatcgactaccagctcgacgtcggcctcaccatcgacctccccatcgtcgg 28849254 Query: 492 caacttcac 500 ||||||||| Sbjct: 28849253 caacttcac 28849245 Score = 50.1 bits (25), Expect = 0.012 Identities = 37/41 (90%) Strand = Plus / Minus Query: 266 tccccatctgcgagatcagctactccctcaagagcgccggc 306 |||||||||||||| ||| |||| |||||||| |||||||| Sbjct: 28849591 tccccatctgcgagctcacctacaccctcaagtgcgccggc 28849551 Score = 42.1 bits (21), Expect = 2.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 113 tgatcgacaaggccaaggggttcgtggcggaga 145 |||| |||||||| || |||||||||||||||| Sbjct: 28849744 tgatggacaaggcgaaagggttcgtggcggaga 28849712
>dbj|AK066062.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050C18, full insert sequence Length = 947 Score = 81.8 bits (41), Expect = 3e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 432 ggactgggacctcgactacgagatgcgcgtaggcctcaccatcgacctccccatcgtcgg 491 |||||||||| |||||||| || | ||| ||||||||||||||||||||||||||||| Sbjct: 632 ggactgggacatcgactaccagctcgacgtcggcctcaccatcgacctccccatcgtcgg 691 Query: 492 caacttcac 500 ||||||||| Sbjct: 692 caacttcac 700 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Plus Query: 266 tccccatctgcgagatcagctactccctcaagagcgccggccgcgaagtcgcctccggga 325 |||||||||||||| ||| |||| |||||||| |||||||| || || || ||||| | Sbjct: 466 tccccatctgcgagctcacctacaccctcaagtgcgccggcaacgttgtggcgtccggca 525 Query: 326 cgatgccggacccggggt 343 ||||||| || ||||||| Sbjct: 526 cgatgcccgatccggggt 543 Score = 42.1 bits (21), Expect = 2.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 113 tgatcgacaaggccaaggggttcgtggcggaga 145 |||| |||||||| || |||||||||||||||| Sbjct: 313 tgatggacaaggcgaaagggttcgtggcggaga 345
>dbj|AK061818.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-B08, full insert sequence Length = 1125 Score = 81.8 bits (41), Expect = 3e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 432 ggactgggacctcgactacgagatgcgcgtaggcctcaccatcgacctccccatcgtcgg 491 |||||||||| |||||||| || | ||| ||||||||||||||||||||||||||||| Sbjct: 810 ggactgggacatcgactaccagctcgacgtcggcctcaccatcgacctccccatcgtcgg 869 Query: 492 caacttcac 500 ||||||||| Sbjct: 870 caacttcac 878 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Plus Query: 266 tccccatctgcgagatcagctactccctcaagagcgccggccgcgaagtcgcctccggga 325 |||||||||||||| ||| |||| |||||||| |||||||| || || || ||||| | Sbjct: 644 tccccatctgcgagctcacctacaccctcaagtgcgccggcaacgttgtggcgtccggca 703 Query: 326 cgatgccggacccggggt 343 ||||||| || ||||||| Sbjct: 704 cgatgcccgatccggggt 721 Score = 42.1 bits (21), Expect = 2.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 113 tgatcgacaaggccaaggggttcgtggcggaga 145 |||| |||||||| || |||||||||||||||| Sbjct: 491 tgatggacaaggcgaaagggttcgtggcggaga 523
>gb|AC134929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0035N21, complete sequence Length = 128331 Score = 81.8 bits (41), Expect = 3e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 432 ggactgggacctcgactacgagatgcgcgtaggcctcaccatcgacctccccatcgtcgg 491 |||||||||| |||||||| || | ||| ||||||||||||||||||||||||||||| Sbjct: 24155 ggactgggacatcgactaccagctcgacgtcggcctcaccatcgacctccccatcgtcgg 24214 Query: 492 caacttcac 500 ||||||||| Sbjct: 24215 caacttcac 24223 Score = 50.1 bits (25), Expect = 0.012 Identities = 37/41 (90%) Strand = Plus / Plus Query: 266 tccccatctgcgagatcagctactccctcaagagcgccggc 306 |||||||||||||| ||| |||| |||||||| |||||||| Sbjct: 23877 tccccatctgcgagctcacctacaccctcaagtgcgccggc 23917 Score = 42.1 bits (21), Expect = 2.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 113 tgatcgacaaggccaaggggttcgtggcggaga 145 |||| |||||||| || |||||||||||||||| Sbjct: 23724 tgatggacaaggcgaaagggttcgtggcggaga 23756
>gb|AY105938.1| Zea mays PCO134925 mRNA sequence Length = 913 Score = 79.8 bits (40), Expect = 1e-11 Identities = 91/108 (84%) Strand = Plus / Plus Query: 432 ggactgggacctcgactacgagatgcgcgtaggcctcaccatcgacctccccatcgtcgg 491 |||||||||| ||||||||||| | | || || |||||| ||||||||||||||||||| Sbjct: 568 ggactgggacatcgactacgagctccaggtcgggctcaccgtcgacctccccatcgtcgg 627 Query: 492 caacttcacgctgccgctcaccaaggccggcgagctcaagctccccac 539 ||||||||| | |||||| ||| | |||||| ||||||||||||| Sbjct: 628 caacttcaccatcccgctctccacctctggcgagttcaagctccccac 675 Score = 44.1 bits (22), Expect = 0.75 Identities = 31/34 (91%) Strand = Plus / Plus Query: 112 ctgatcgacaaggccaaggggttcgtggcggaga 145 ||||| |||||||| ||||||||||| ||||||| Sbjct: 248 ctgatggacaaggcgaaggggttcgtcgcggaga 281
>gb|AY104771.1| Zea mays PCO087563 mRNA sequence Length = 629 Score = 67.9 bits (34), Expect = 5e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 245 gcaacccctactcacacaccatccccatctgcgagatcagctactccctcaagagcgccg 304 ||||||||||||| ||| |||||||||||||||||||| |||| | |||||||||||| Sbjct: 422 gcaacccctactctcaccgcatccccatctgcgagatcacctacacgttcaagagcgccg 481 Query: 305 gc 306 || Sbjct: 482 gc 483 Score = 42.1 bits (21), Expect = 2.9 Identities = 57/69 (82%) Strand = Plus / Plus Query: 382 gtgaaggtgccctacgacttccttgtgagcctgatgaaggacgccgggaaggactgggac 441 ||||||||||| ||||||||| | ||| ||||||||||| ||| | |||||||||| Sbjct: 559 gtgaaggtgccgtacgacttcatcgtgtcgctgatgaaggatctcggaagggactgggac 618 Query: 442 ctcgactac 450 |||||||| Sbjct: 619 atcgactac 627
>emb|CT987589.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 505 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 266 tccccatctgcgagatcagctactccctcaagagcgccggccgcgaagtcgcctccggga 325 ||||||||||||||||| ||||||| |||| ||||||||| | || | || || |||| Sbjct: 143 tccccatctgcgagatctcctactccttcaaaagcgccggcagggagatagcgtcgggga 202 Query: 326 cgatgccggacccggggtcgctggtggccagcgacac 362 | ||||||| |||||||||||| |||||||||||| Sbjct: 203 aggtgccggatccggggtcgctgaaggccagcgacac 239 Score = 46.1 bits (23), Expect = 0.19 Identities = 32/35 (91%) Strand = Plus / Plus Query: 466 ctcaccatcgacctccccatcgtcggcaacttcac 500 |||| |||||||||||||||| |||| |||||||| Sbjct: 343 ctcatcatcgacctccccatcatcgggaacttcac 377
>emb|CT987528.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 505 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 266 tccccatctgcgagatcagctactccctcaagagcgccggccgcgaagtcgcctccggga 325 ||||||||||||||||| ||||||| |||| ||||||||| | || | || || |||| Sbjct: 143 tccccatctgcgagatctcctactccttcaaaagcgccggcagggagatagcgtcgggga 202 Query: 326 cgatgccggacccggggtcgctggtggccagcgacac 362 | ||||||| |||||||||||| |||||||||||| Sbjct: 203 aggtgccggatccggggtcgctgaaggccagcgacac 239 Score = 46.1 bits (23), Expect = 0.19 Identities = 32/35 (91%) Strand = Plus / Plus Query: 466 ctcaccatcgacctccccatcgtcggcaacttcac 500 |||| |||||||||||||||| |||| |||||||| Sbjct: 343 ctcatcatcgacctccccatcatcgggaacttcac 377
>emb|CT987336.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 620 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 266 tccccatctgcgagatcagctactccctcaagagcgccggccgcgaagtcgcctccggga 325 ||||||||||||||||| ||||||| |||| ||||||||| | || | || || |||| Sbjct: 239 tccccatctgcgagatctcctactccttcaaaagcgccggcagggagatagcgtcgggga 298 Query: 326 cgatgccggacccggggtcgctggtggccagcgacac 362 | ||||||| |||||||||||| |||||||||||| Sbjct: 299 aggtgccggatccggggtcgctgaaggccagcgacac 335 Score = 46.1 bits (23), Expect = 0.19 Identities = 32/35 (91%) Strand = Plus / Plus Query: 466 ctcaccatcgacctccccatcgtcggcaacttcac 500 |||| |||||||||||||||| |||| |||||||| Sbjct: 439 ctcatcatcgacctccccatcatcgggaacttcac 473
>emb|CT985484.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 612 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 266 tccccatctgcgagatcagctactccctcaagagcgccggccgcgaagtcgcctccggga 325 ||||||||||||||||| ||||||| |||| ||||||||| | || | || || |||| Sbjct: 228 tccccatctgcgagatctcctactccttcaaaagcgccggcagggagatagcgtcgggga 287 Query: 326 cgatgccggacccggggtcgctggtggccagcgacac 362 | ||||||| |||||||||||| |||||||||||| Sbjct: 288 aggtgccggatccggggtcgctgaaggccagcgacac 324 Score = 46.1 bits (23), Expect = 0.19 Identities = 32/35 (91%) Strand = Plus / Plus Query: 466 ctcaccatcgacctccccatcgtcggcaacttcac 500 |||| |||||||||||||||| |||| |||||||| Sbjct: 428 ctcatcatcgacctccccatcatcgggaacttcac 462
>emb|CT984156.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 504 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 266 tccccatctgcgagatcagctactccctcaagagcgccggccgcgaagtcgcctccggga 325 ||||||||||||||||| ||||||| |||| ||||||||| | || | || || |||| Sbjct: 143 tccccatctgcgagatctcctactccttcaaaagcgccggcagggagatagcgtcgggga 202 Query: 326 cgatgccggacccggggtcgctggtggccagcgacac 362 | ||||||| |||||||||||| |||||||||||| Sbjct: 203 aggtgccggatccggggtcgctgaaggccagcgacac 239 Score = 46.1 bits (23), Expect = 0.19 Identities = 32/35 (91%) Strand = Plus / Plus Query: 466 ctcaccatcgacctccccatcgtcggcaacttcac 500 |||| |||||||||||||||| |||| |||||||| Sbjct: 343 ctcatcatcgacctccccatcatcgggaacttcac 377
>emb|CT983657.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 505 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 266 tccccatctgcgagatcagctactccctcaagagcgccggccgcgaagtcgcctccggga 325 ||||||||||||||||| ||||||| |||| ||||||||| | || | || || |||| Sbjct: 143 tccccatctgcgagatctcctactccttcaaaagcgccggcagggagatagcgtcgggga 202 Query: 326 cgatgccggacccggggtcgctggtggccagcgacac 362 | ||||||| |||||||||||| |||||||||||| Sbjct: 203 aggtgccggatccggggtcgctgaaggccagcgacac 239 Score = 46.1 bits (23), Expect = 0.19 Identities = 32/35 (91%) Strand = Plus / Plus Query: 466 ctcaccatcgacctccccatcgtcggcaacttcac 500 |||| |||||||||||||||| |||| |||||||| Sbjct: 343 ctcatcatcgacctccccatcatcgggaacttcac 377
>emb|CT983563.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 618 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 266 tccccatctgcgagatcagctactccctcaagagcgccggccgcgaagtcgcctccggga 325 ||||||||||||||||| ||||||| |||| ||||||||| | || | || || |||| Sbjct: 239 tccccatctgcgagatctcctactccttcaaaagcgccggcagggagatagcgtcgggga 298 Query: 326 cgatgccggacccggggtcgctggtggccagcgacac 362 | ||||||| |||||||||||| |||||||||||| Sbjct: 299 aggtgccggatccggggtcgctgaaggccagcgacac 335 Score = 46.1 bits (23), Expect = 0.19 Identities = 32/35 (91%) Strand = Plus / Plus Query: 466 ctcaccatcgacctccccatcgtcggcaacttcac 500 |||| |||||||||||||||| |||| |||||||| Sbjct: 439 ctcatcatcgacctccccatcatcgggaacttcac 473
>emb|CT983046.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 612 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 266 tccccatctgcgagatcagctactccctcaagagcgccggccgcgaagtcgcctccggga 325 ||||||||||||||||| ||||||| |||| ||||||||| | || | || || |||| Sbjct: 228 tccccatctgcgagatctcctactccttcaaaagcgccggcagggagatagcgtcgggga 287 Query: 326 cgatgccggacccggggtcgctggtggccagcgacac 362 | ||||||| |||||||||||| |||||||||||| Sbjct: 288 aggtgccggatccggggtcgctgaaggccagcgacac 324 Score = 46.1 bits (23), Expect = 0.19 Identities = 32/35 (91%) Strand = Plus / Plus Query: 466 ctcaccatcgacctccccatcgtcggcaacttcac 500 |||| |||||||||||||||| |||| |||||||| Sbjct: 428 ctcatcatcgacctccccatcatcgggaacttcac 462
>emb|CT982920.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 612 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 266 tccccatctgcgagatcagctactccctcaagagcgccggccgcgaagtcgcctccggga 325 ||||||||||||||||| ||||||| |||| ||||||||| | || | || || |||| Sbjct: 228 tccccatctgcgagatctcctactccttcaaaagcgccggcagggagatagcgtcgggga 287 Query: 326 cgatgccggacccggggtcgctggtggccagcgacac 362 | ||||||| |||||||||||| |||||||||||| Sbjct: 288 aggtgccggatccggggtcgctgaaggccagcgacac 324 Score = 46.1 bits (23), Expect = 0.19 Identities = 32/35 (91%) Strand = Plus / Plus Query: 466 ctcaccatcgacctccccatcgtcggcaacttcac 500 |||| |||||||||||||||| |||| |||||||| Sbjct: 428 ctcatcatcgacctccccatcatcgggaacttcac 462
>emb|CT982764.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 612 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 266 tccccatctgcgagatcagctactccctcaagagcgccggccgcgaagtcgcctccggga 325 ||||||||||||||||| ||||||| |||| ||||||||| | || | || || |||| Sbjct: 228 tccccatctgcgagatctcctactccttcaaaagcgccggcagggagatagcgtcgggga 287 Query: 326 cgatgccggacccggggtcgctggtggccagcgacac 362 | ||||||| |||||||||||| |||||||||||| Sbjct: 288 aggtgccggatccggggtcgctgaaggccagcgacac 324 Score = 46.1 bits (23), Expect = 0.19 Identities = 32/35 (91%) Strand = Plus / Plus Query: 466 ctcaccatcgacctccccatcgtcggcaacttcac 500 |||| |||||||||||||||| |||| |||||||| Sbjct: 428 ctcatcatcgacctccccatcatcgggaacttcac 462
>gb|DQ245649.1| Zea mays clone 18757 mRNA sequence Length = 728 Score = 61.9 bits (31), Expect = 3e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 466 ctcaccatcgacctccccatcgtcggcaacttcac 500 ||||||||||||||||||||| ||||||||||||| Sbjct: 466 ctcaccatcgacctccccatcatcggcaacttcac 500
>gb|AY823547.1| Pennisetum glaucum late embryonic abundant-like protein mRNA, complete cds Length = 670 Score = 58.0 bits (29), Expect = 5e-05 Identities = 57/65 (87%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 436 tgggacctcgactacgagatgcgcgtaggcctcaccatcgacctccccatcgtcggcaac 495 |||||| ||||||||||| | | || || |||||||||||| ||||||||||||||||| Sbjct: 466 tgggacatcgactacgagctccaggtggggctcaccatcgac-tccccatcgtcggcaac 524 Query: 496 ttcac 500 ||||| Sbjct: 525 ttcac 529 Score = 48.1 bits (24), Expect = 0.048 Identities = 30/32 (93%) Strand = Plus / Plus Query: 112 ctgatcgacaaggccaaggggttcgtggcgga 143 ||||| ||||||||||||| |||||||||||| Sbjct: 141 ctgatggacaaggccaaggagttcgtggcgga 172 Score = 48.1 bits (24), Expect = 0.048 Identities = 36/40 (90%) Strand = Plus / Plus Query: 266 tccccatctgcgagatcagctactccctcaagagcgccgg 305 |||||||||||||| ||| |||| |||||||| ||||||| Sbjct: 295 tccccatctgcgaggtcacctacaccctcaagtgcgccgg 334
>emb|CT836534.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA059J04, full insert sequence Length = 714 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 246 caacccctactcacacaccatccccatctgcgagatcagctactccctcaagagcg 301 |||||||||||| ||| |||||||||||||||| ||| |||| || ||||||||| Sbjct: 20 caacccctactcgcaccgcatccccatctgcgagctcacctacaccttcaagagcg 75 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Plus Query: 467 tcaccatcgacctccccatcgtcggcaacttcac 500 ||||||||||||||||| ||||||||| |||||| Sbjct: 365 tcaccatcgacctccccgtcgtcggcagcttcac 398
>ref|NM_001050154.1| Oryza sativa (japonica cultivar-group) Os01g0624400 (Os01g0624400) mRNA, complete cds Length = 543 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 246 caacccctactcacacaccatccccatctgcgagatcagctactccctcaagagcg 301 |||||||||||| ||| |||||||||||||||| ||| |||| || ||||||||| Sbjct: 228 caacccctactcgcaccgcatccccatctgcgagctcacctacaccttcaagagcg 283 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Plus Query: 467 tcaccatcgacctccccatcgtcggcaacttcac 500 ||||||||||||||||| ||||||||| |||||| Sbjct: 449 tcaccatcgacctccccgtcgtcggcagcttcac 482 Score = 48.1 bits (24), Expect = 0.048 Identities = 27/28 (96%) Strand = Plus / Plus Query: 118 gacaaggccaaggggttcgtggcggaga 145 |||| ||||||||||||||||||||||| Sbjct: 100 gacagggccaaggggttcgtggcggaga 127
>dbj|AP002744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0006C01 Length = 153865 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 246 caacccctactcacacaccatccccatctgcgagatcagctactccctcaagagcg 301 |||||||||||| ||| |||||||||||||||| ||| |||| || ||||||||| Sbjct: 1763 caacccctactcgcaccgcatccccatctgcgagctcacctacaccttcaagagcg 1818 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Plus Query: 467 tcaccatcgacctccccatcgtcggcaacttcac 500 ||||||||||||||||| ||||||||| |||||| Sbjct: 2108 tcaccatcgacctccccgtcgtcggcagcttcac 2141 Score = 48.1 bits (24), Expect = 0.048 Identities = 27/28 (96%) Strand = Plus / Plus Query: 118 gacaaggccaaggggttcgtggcggaga 145 |||| ||||||||||||||||||||||| Sbjct: 1635 gacagggccaaggggttcgtggcggaga 1662
>dbj|AP002819.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0501G01 Length = 154561 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 246 caacccctactcacacaccatccccatctgcgagatcagctactccctcaagagcg 301 |||||||||||| ||| |||||||||||||||| ||| |||| || ||||||||| Sbjct: 152360 caacccctactcgcaccgcatccccatctgcgagctcacctacaccttcaagagcg 152415 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Plus Query: 467 tcaccatcgacctccccatcgtcggcaacttcac 500 ||||||||||||||||| ||||||||| |||||| Sbjct: 152705 tcaccatcgacctccccgtcgtcggcagcttcac 152738 Score = 48.1 bits (24), Expect = 0.048 Identities = 27/28 (96%) Strand = Plus / Plus Query: 118 gacaaggccaaggggttcgtggcggaga 145 |||| ||||||||||||||||||||||| Sbjct: 152232 gacagggccaaggggttcgtggcggaga 152259
>ref|XM_428380.2| PREDICTED: Gallus gallus hypothetical LOC430829 (LOC430829), mRNA Length = 4671 Score = 46.1 bits (23), Expect = 0.19 Identities = 26/27 (96%) Strand = Plus / Minus Query: 519 cggcgagctcaagctccccacgctctc 545 |||||||||| |||||||||||||||| Sbjct: 329 cggcgagctccagctccccacgctctc 303
>gb|CP000458.1| Burkholderia cenocepacia HI2424 chromosome 1, complete genome Length = 3483902 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Minus Query: 488 tcggcaacttcacgctgccgctc 510 ||||||||||||||||||||||| Sbjct: 2019316 tcggcaacttcacgctgccgctc 2019294
>gb|CP000440.1| Burkholderia cepacia AMMD chromosome 1, complete sequence Length = 3556545 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Minus Query: 488 tcggcaacttcacgctgccgctc 510 ||||||||||||||||||||||| Sbjct: 1941185 tcggcaacttcacgctgccgctc 1941163
>gb|CP000380.1| Burkholderia cenocepacia AU 1054 chromosome 3, complete sequence Length = 1196094 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Plus Query: 488 tcggcaacttcacgctgccgctc 510 ||||||||||||||||||||||| Sbjct: 872388 tcggcaacttcacgctgccgctc 872410
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Minus Query: 488 tcggcaacttcacgctgccgctc 510 ||||||||||||||||||||||| Sbjct: 2161572 tcggcaacttcacgctgccgctc 2161550
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Plus Query: 488 tcggcaacttcacgctgccgctc 510 ||||||||||||||||||||||| Sbjct: 2506656 tcggcaacttcacgctgccgctc 2506678
>emb|AM260479.1| Ralstonia eutropha H16 chromosome 1 Length = 4052032 Score = 44.1 bits (22), Expect = 0.75 Identities = 22/22 (100%) Strand = Plus / Minus Query: 488 tcggcaacttcacgctgccgct 509 |||||||||||||||||||||| Sbjct: 2574691 tcggcaacttcacgctgccgct 2574670
>gb|AY301064.1| Aeromonas salmonicida subsp. salmonicida strain A449 plasmid pAsa2, complete sequence Length = 5247 Score = 44.1 bits (22), Expect = 0.75 Identities = 22/22 (100%) Strand = Plus / Minus Query: 525 gctcaagctccccacgctctcc 546 |||||||||||||||||||||| Sbjct: 5104 gctcaagctccccacgctctcc 5083
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.75 Identities = 22/22 (100%) Strand = Plus / Plus Query: 300 cgccggccgcgaagtcgcctcc 321 |||||||||||||||||||||| Sbjct: 3114592 cgccggccgcgaagtcgcctcc 3114613
>emb|AJ508384.1|ASA508384 Aeromonas salmonicida subsp. salmonicida pAsal3 plasmid Length = 5249 Score = 44.1 bits (22), Expect = 0.75 Identities = 22/22 (100%) Strand = Plus / Minus Query: 525 gctcaagctccccacgctctcc 546 |||||||||||||||||||||| Sbjct: 4583 gctcaagctccccacgctctcc 4562
>ref|NM_001063551.1| Oryza sativa (japonica cultivar-group) Os06g0187500 (Os06g0187500) mRNA, complete cds Length = 1647 Score = 42.1 bits (21), Expect = 2.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 210 cgacggcgccaccctgtccggccgc 234 |||||||||||||||| |||||||| Sbjct: 156 cgacggcgccaccctggccggccgc 180
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 2.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 106 gcgcagctgatcgacaaggcc 126 ||||||||||||||||||||| Sbjct: 3159747 gcgcagctgatcgacaaggcc 3159727
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 2.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 210 cgacggcgccaccctgtccggccgc 234 |||||||||||||||| |||||||| Sbjct: 4431096 cgacggcgccaccctggccggccgc 4431072
>dbj|AP005913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0005A05 Length = 162520 Score = 42.1 bits (21), Expect = 2.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 210 cgacggcgccaccctgtccggccgc 234 |||||||||||||||| |||||||| Sbjct: 25826 cgacggcgccaccctggccggccgc 25802
>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0470C02 Length = 158849 Score = 42.1 bits (21), Expect = 2.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 210 cgacggcgccaccctgtccggccgc 234 |||||||||||||||| |||||||| Sbjct: 78777 cgacggcgccaccctggccggccgc 78753 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 103,895,167 Number of extensions: 5573364 Number of successful extensions: 99137 Number of sequences better than 10.0: 50 Number of HSP's gapped: 99097 Number of HSP's successfully gapped: 95 Length of query: 784 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 762 Effective length of database: 18,508,616,841 Effective search space: 14103566032842 Effective search space used: 14103566032842 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
