ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf98n06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK103424:Os08g0156800 | 190 | 7e-49 | 2 | AK062479:Os08g0436800 | 190 | 7e-49 | 3 | AK062367: | 107 | 7e-24 | 4 | AK059470:Os09g0413500 | 61 | 6e-10 | 5 | AK112097:Os01g0141700 | 29 | 3.4 | 6 | AK111907:Os01g0141700 | 29 | 3.4 | 7 | AB082381:Os01g0141700 | 29 | 3.4 | 8 | AK102358:Os10g0405100 | 28 | 4.3 | 9 | AY428025:Os08g0465800 | 28 | 4.4 | 10 | Os03g0170400:Os03g0170400 | 28 | 5.7 | 11 | Os05g0248300:Os05g0248300 | 28 | 7.5 | 12 | Os02g0628600:Os02g0628600 | 28 | 7.5 | 13 | AK104697:Os07g0264800 | 28 | 7.5 | 14 | AK073808:Os05g0389700 | 28 | 7.5 | 15 | AK066403:Os07g0264800 | 28 | 7.5 |
|---|
>AK103424:Os08g0156800 | Length = 118 Score = 190 bits (483), Expect = 7e-49 Identities = 93/95 (97%), Positives = 93/95 (97%) Frame = +2 Query: 86 MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPT 265 MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRP Sbjct: 1 MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 60 Query: 266 EYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 370 EYKRSRLSRNRRTVNRPYGGVLSG AVRERIIRAF Sbjct: 61 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 95
>AK062479:Os08g0436800 | Length = 118 Score = 190 bits (483), Expect = 7e-49 Identities = 93/95 (97%), Positives = 93/95 (97%) Frame = +2 Query: 86 MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPT 265 MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRP Sbjct: 1 MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPA 60 Query: 266 EYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 370 EYKRSRLSRNRRTVNRPYGGVLSG AVRERIIRAF Sbjct: 61 EYKRSRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 95
>AK062367: | Length = 116 Score = 107 bits (267), Expect = 7e-24 Identities = 53/92 (57%), Positives = 66/92 (71%) Frame = +2 Query: 95 RLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYK 274 R+TYR+RHSYATKSN +VVKTPGG+LV QY KK +GPKC + ++GI HL P EYK Sbjct: 6 RVTYRRRHSYATKSNGIKVVKTPGGKLVAQYRKKATAGPKCGDCKQSLKGIKHLSPKEYK 65 Query: 275 RSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 370 +S+ RTV+R YGG VR+RI+RAF Sbjct: 66 --TVSKTHRTVSRAYGGSRCATCVRQRIVRAF 95
>AK059470:Os09g0413500 | Length = 62 Score = 61.2 bits (147), Expect = 6e-10 Identities = 30/31 (96%), Positives = 30/31 (96%) Frame = +2 Query: 278 SRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 370 SRLSRNRRTVNRPYGGVLSG AVRERIIRAF Sbjct: 8 SRLSRNRRTVNRPYGGVLSGTAVRERIIRAF 38
>AK112097:Os01g0141700 | Length = 583 Score = 28.9 bits (63), Expect = 3.4 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 7/63 (11%) Frame = +1 Query: 67 RQRGRRHG--AAPDVPEAAQLRHQV*P-----DQGCQNPRREACVPVHEEEGERAEMSGH 225 R+R RR G AAPD + + + + D+G ++ E V +++GE AE SG Sbjct: 13 RRRRRRRGPYAAPDDDDEEEDQQEASSSSSSSDEGEEDAEEEGSGEVDDDDGEAAEPSGK 72 Query: 226 RQE 234 +E Sbjct: 73 EEE 75
>AK111907:Os01g0141700 | Length = 583 Score = 28.9 bits (63), Expect = 3.4 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 7/63 (11%) Frame = +1 Query: 67 RQRGRRHG--AAPDVPEAAQLRHQV*P-----DQGCQNPRREACVPVHEEEGERAEMSGH 225 R+R RR G AAPD + + + + D+G ++ E V +++GE AE SG Sbjct: 13 RRRRRRRGPYAAPDDDDEEEDQQEASSSSSSSDEGEEDAEEEGSGEVDDDDGEAAEPSGK 72 Query: 226 RQE 234 +E Sbjct: 73 EEE 75
>AB082381:Os01g0141700 | Length = 584 Score = 28.9 bits (63), Expect = 3.4 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 7/63 (11%) Frame = +1 Query: 67 RQRGRRHG--AAPDVPEAAQLRHQV*P-----DQGCQNPRREACVPVHEEEGERAEMSGH 225 R+R RR G AAPD + + + + D+G ++ E V +++GE AE SG Sbjct: 13 RRRRRRRGPYAAPDDDDEEEDQQEASSSSSSSDEGEEDAEEEGSGEVDDDDGEAAEPSGK 72 Query: 226 RQE 234 +E Sbjct: 73 EEE 75
>AK102358:Os10g0405100 | Length = 428 Score = 28.5 bits (62), Expect = 4.3 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Frame = +3 Query: 468 RTDGDECSVKSLRSMLSSWLLN*TRDFRPFS-CSEGGSGSHY 590 RT+G+ S +L++ S L N T++F+P S EGG G Y Sbjct: 59 RTEGEILSSSNLKAFTLSELKNATKNFKPDSLLGEGGFGYVY 100
>AY428025:Os08g0465800 | Length = 505 Score = 28.5 bits (62), Expect = 4.4 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 4/67 (5%) Frame = +1 Query: 58 RSERQRGRRH--GAAPDVPEAAQLRHQV*PDQGCQ--NPRREACVPVHEEEGERAEMSGH 225 R+ R+ RRH G P+ AA+L H+ P + + P E + H E GH Sbjct: 394 RARRRPPRRHQGGLQPEPRRAARLGHRQDPARAGRPFGPGAED-LQRHREAAIGRRWRGH 452 Query: 226 RQEDPGD 246 ++E PGD Sbjct: 453 QEERPGD 459
>Os03g0170400:Os03g0170400 | Length = 387 Score = 28.1 bits (61), Expect = 5.7 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Frame = +3 Query: 468 RTDGDECSVKSLRSMLSSWLLN*TRDFRPFS-CSEGGSGSHY 590 RT+G+ S +L++ + L N T++FRP S EGG G Y Sbjct: 26 RTEGEILSSSNLKAFSFNDLRNATKNFRPDSLLGEGGFGHVY 67
>Os05g0248300:Os05g0248300 | Length = 599 Score = 27.7 bits (60), Expect = 7.5 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Frame = -2 Query: 513 AYYAGF*L-NTHHHLSSKKKPQPFHFDGCFSLVFWIFRTFFT 391 AY GF + NTHH+ ++ KK + D W+F F T Sbjct: 319 AYLVGFSIVNTHHYKTTSKK---MNGDETMETFKWVFEAFLT 357
>Os02g0628600:Os02g0628600 | Length = 821 Score = 27.7 bits (60), Expect = 7.5 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -1 Query: 181 VHKPPSWGFDNPGLVRLGGVAVPLPVRQALHHG 83 ++K P W + L G A+P +R+ LHHG Sbjct: 789 INKRPRWEYIACRHGALSGSALPAALRECLHHG 821
>AK104697:Os07g0264800 | Length = 294 Score = 27.7 bits (60), Expect = 7.5 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +1 Query: 166 REACVPVHEEEGERAEMSGHRQEDPGD 246 R AC+P EEE E ++G E+ GD Sbjct: 61 RVACLPTKEEEEEEVGVAGDGGEEDGD 87
>AK073808:Os05g0389700 | Length = 519 Score = 27.7 bits (60), Expect = 7.5 Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 1/66 (1%) Frame = +1 Query: 52 AERSERQRGRRHGAAPDVPEAAQLRHQV*PDQGCQNPRRE-ACVPVHEEEGERAEMSGHR 228 A+R + Q + HG P + + Q Q+ P Q NP A P H R R Sbjct: 362 AKRQKTQHPQPHGRLPPIQQTGQPHPQIRPGQPMNNPHAPMAAGPGHHYAKPRGPGGSSR 421 Query: 229 QEDPGD 246 G+ Sbjct: 422 YPQGGN 427
>AK066403:Os07g0264800 | Length = 294 Score = 27.7 bits (60), Expect = 7.5 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +1 Query: 166 REACVPVHEEEGERAEMSGHRQEDPGD 246 R AC+P EEE E ++G E+ GD Sbjct: 61 RVACLPTKEEEEEEVGVAGDGGEEDGD 87 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 20,075,118 Number of extensions: 462229 Number of successful extensions: 1228 Number of sequences better than 10.0: 15 Number of HSP's gapped: 1227 Number of HSP's successfully gapped: 15 Length of query: 226 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 129 Effective length of database: 11,515,878 Effective search space: 1485548262 Effective search space used: 1485548262 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
