ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf98n06 |
|---|---|
| Clone Library Name | barley_pub |
>P41098:RL34_TOBAC 60S ribosomal protein L34 - Nicotiana tabacum (Common tobacco)| Length = 120 Score = 181 bits (458), Expect = 3e-45 Identities = 88/95 (92%), Positives = 91/95 (95%) Frame = +2 Query: 86 MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPT 265 MVQRLTYRKRHSYATKSNQ RVVKTPGG+L+YQ TKKRASGPKCPVTGK+IQGIPHLRPT Sbjct: 1 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPT 60 Query: 266 EYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 370 EYKRSRLSRNRRTVNR YGGVLSG AVRERIIRAF Sbjct: 61 EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95
>P40590:RL34_PEA 60S ribosomal protein L34 - Pisum sativum (Garden pea)| Length = 120 Score = 179 bits (454), Expect = 9e-45 Identities = 88/95 (92%), Positives = 91/95 (95%) Frame = +2 Query: 86 MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPT 265 MVQRLTYR+RHSYATKSNQ RVVKTPGG+LVYQ TKKRASGPKCPVTGK+IQGIPHLRPT Sbjct: 1 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60 Query: 266 EYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 370 EYKRSRLSRNRRTVNR YGGVLSG AVRERIIRAF Sbjct: 61 EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 95
>Q9FE65:RL342_ARATH 60S ribosomal protein L34-2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 119 Score = 175 bits (444), Expect = 1e-43 Identities = 85/95 (89%), Positives = 88/95 (92%) Frame = +2 Query: 86 MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPT 265 MVQRL YR RHSYATKSNQ R+VKTPGG+L YQ TKKRASGPKCPVTGK+IQGIPHLRPT Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60 Query: 266 EYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 370 EYKRSRLSRNRRTVNR YGGVLSG AVRERIIRAF Sbjct: 61 EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95
>Q42351:RL341_ARATH 60S ribosomal protein L34-1 - Arabidopsis thaliana (Mouse-ear| cress) Length = 120 Score = 175 bits (444), Expect = 1e-43 Identities = 85/95 (89%), Positives = 89/95 (93%) Frame = +2 Query: 86 MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPT 265 MVQRL YR RHSYATKSNQ R+VKTPGG+LVYQ TKKRASGPKCPVTGK+IQGIPHLRP+ Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPS 60 Query: 266 EYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 370 EYKRSRLSRNRRTVNR YGGVLSG AVRERIIRAF Sbjct: 61 EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95
>Q9LJW6:RL343_ARATH 60S ribosomal protein L34-3 - Arabidopsis thaliana (Mouse-ear| cress) Length = 120 Score = 167 bits (423), Expect = 3e-41 Identities = 80/95 (84%), Positives = 85/95 (89%) Frame = +2 Query: 86 MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPT 265 MVQRL YR RHSYATKSNQ R+VKTPGG+L YQ T KRASGPKCPVTGK+IQGIPHLRP Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPA 60 Query: 266 EYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 370 EYKRSRL+RN RTVNR YGGVLSG AVRERI+RAF Sbjct: 61 EYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAF 95
>O42846:RL34A_SCHPO 60S ribosomal protein L34-A - Schizosaccharomyces pombe (Fission| yeast) Length = 112 Score = 106 bits (265), Expect = 7e-23 Identities = 51/95 (53%), Positives = 70/95 (73%) Frame = +2 Query: 86 MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPT 265 M QR+TYR+R +Y T+SN+TR++KTPG + Y + KK + P+C TG +QGIP LRP Sbjct: 1 MAQRVTYRRRLAYNTRSNRTRIIKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALRPR 60 Query: 266 EYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 370 E+ +RLS N++TV R YGG LS AV++RI+RAF Sbjct: 61 EF--ARLSHNKKTVQRAYGGCLSANAVKDRIVRAF 93
>Q9URT8:RL34B_SCHPO 60S ribosomal protein L34-B - Schizosaccharomyces pombe (Fission| yeast) Length = 111 Score = 103 bits (258), Expect = 5e-22 Identities = 50/95 (52%), Positives = 69/95 (72%) Frame = +2 Query: 86 MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPT 265 M QR+TYR+R +Y T+SN+TR++KTPG + Y + KK + P+C TG +QGIP LRP Sbjct: 1 MAQRVTYRRRLAYNTRSNKTRIIKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALRPR 60 Query: 266 EYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 370 E+ +RLS N++ V R YGG LS AV++RI+RAF Sbjct: 61 EF--ARLSHNQKKVQRAYGGCLSANAVKDRIVRAF 93
>Q9NB34:RL34_AEDTR 60S ribosomal protein L34 - Aedes triseriatus (Mosquito)| (Ochlerotatus triseriatus) Length = 139 Score = 103 bits (257), Expect = 6e-22 Identities = 55/95 (57%), Positives = 68/95 (71%) Frame = +2 Query: 86 MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPT 265 MVQRLT R+R SY TKSN+ RVV+TPGGRLVY Y KK+ + PKC +K+ GI RP+ Sbjct: 1 MVQRLTLRRRLSYNTKSNKRRVVRTPGGRLVYLYVKKQRTVPKCGQCKEKLSGIKPSRPS 60 Query: 266 EYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 370 E R R+ R +TV R +GGVL + +RERIIRAF Sbjct: 61 E--RPRMCRRLKTVTRTFGGVLCHRCLRERIIRAF 93
>P45842:RL34_AEDAL 60S ribosomal protein L34 - Aedes albopictus (Forest day mosquito)| Length = 130 Score = 103 bits (257), Expect = 6e-22 Identities = 55/95 (57%), Positives = 68/95 (71%) Frame = +2 Query: 86 MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPT 265 MVQRLT R+R SY TKSN+ RVV+TPGGRLVY Y KK+ + PKC +K+ GI RP+ Sbjct: 1 MVQRLTLRRRLSYNTKSNKRRVVRTPGGRLVYLYVKKQRTVPKCGQCKEKLSGIKPSRPS 60 Query: 266 EYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 370 E R R+ R +TV R +GGVL + +RERIIRAF Sbjct: 61 E--RPRMCRRLKTVTRTFGGVLCHRCLRERIIRAF 93
>P87262:RL34A_YEAST 60S ribosomal protein L34-A - Saccharomyces cerevisiae (Baker's| yeast) Length = 121 Score = 94.0 bits (232), Expect = 5e-19 Identities = 48/95 (50%), Positives = 65/95 (68%) Frame = +2 Query: 86 MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPT 265 M QR+T+R+R+ Y T+SN+ +VVKTPGG L Q+ KK A+ PKC G +QGI LRP Sbjct: 1 MAQRVTFRRRNPYNTRSNKIKVVKTPGGILRAQHVKKLATRPKCGDCGSALQGISTLRPR 60 Query: 266 EYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 370 +Y + +S+ +TV+R YGG V+ERIIRAF Sbjct: 61 QY--ATVSKTHKTVSRAYGGSRCANCVKERIIRAF 93
>P40525:RL34B_YEAST 60S ribosomal protein L34-B - Saccharomyces cerevisiae (Baker's| yeast) Length = 121 Score = 93.6 bits (231), Expect = 6e-19 Identities = 47/95 (49%), Positives = 65/95 (68%) Frame = +2 Query: 86 MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPT 265 M QR+T+R+R+ Y T+SN+ +VVKTPGG L Q+ KK A+ PKC G +QGI LRP Sbjct: 1 MAQRVTFRRRNPYNTRSNKIKVVKTPGGILRAQHVKKLATRPKCGDCGSALQGISTLRPR 60 Query: 266 EYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 370 +Y + +S+ +TV+R YGG V+ERI+RAF Sbjct: 61 QY--ATVSKTHKTVSRAYGGSRCANCVKERIVRAF 93
>Q7ZWJ7:RL34_DANRE 60S ribosomal protein L34 - Danio rerio (Zebrafish) (Brachydanio| rerio) Length = 117 Score = 89.7 bits (221), Expect = 9e-18 Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 2/97 (2%) Frame = +2 Query: 86 MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPK--CPVTGKKIQGIPHLR 259 MVQRLTYR+R SY T SN+TR+ +TPG R+VY YTKK PK C + +++GI +R Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKTGKSPKSACGICPGRLRGIRAVR 60 Query: 260 PTEYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 370 P RLS+ ++ V+R YGG + + VR+RI RAF Sbjct: 61 PQVL--MRLSKTKKHVSRAYGGSMCAKCVRDRIKRAF 95
>P49207:RL34_HUMAN 60S ribosomal protein L34 - Homo sapiens (Human)| Length = 117 Score = 89.0 bits (219), Expect = 2e-17 Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 2/97 (2%) Frame = +2 Query: 86 MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPK--CPVTGKKIQGIPHLR 259 MVQRLTYR+R SY T SN+TR+ +TPG R+VY YTKK PK C V +++G+ +R Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60 Query: 260 PTEYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 370 P RLS+ ++ V+R YGG + + VR+RI RAF Sbjct: 61 PKVL--MRLSKTKKHVSRAYGGSMCAKCVRDRIKRAF 95
>Q9D1R9:RL34_MOUSE 60S ribosomal protein L34 - Mus musculus (Mouse)| Length = 117 Score = 88.6 bits (218), Expect = 2e-17 Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 2/97 (2%) Frame = +2 Query: 86 MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPK--CPVTGKKIQGIPHLR 259 MVQRLTYR+R SY T SN+TR+ +TPG R+VY YTKK PK C V +++G+ +R Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60 Query: 260 PTEYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 370 P RLS+ ++ V+R YGG + + VR+RI RAF Sbjct: 61 PKVL--MRLSKTQKHVSRAYGGSMCAKCVRDRIKRAF 95
>Q90YT5:RL34_ICTPU 60S ribosomal protein L34 - Ictalurus punctatus (Channel catfish)| Length = 117 Score = 87.4 bits (215), Expect = 4e-17 Identities = 47/97 (48%), Positives = 64/97 (65%), Gaps = 2/97 (2%) Frame = +2 Query: 86 MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPK--CPVTGKKIQGIPHLR 259 MVQRLTYR+ SY T SN+TR+ +TPG R+VY YTKK PK C + +++GI +R Sbjct: 1 MVQRLTYRRTVSYNTTSNKTRLSRTPGNRIVYLYTKKTGKAPKSACGICPGRLRGIRAVR 60 Query: 260 PTEYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 370 P RLS+ ++ V+R YGG + + VR+RI RAF Sbjct: 61 PQVL--MRLSKTKKHVSRAYGGSMCAKCVRDRIKRAF 95
>P11250:RL34_RAT 60S ribosomal protein L34 - Rattus norvegicus (Rat)| Length = 117 Score = 72.4 bits (176), Expect = 1e-12 Identities = 43/97 (44%), Positives = 59/97 (60%), Gaps = 2/97 (2%) Frame = +2 Query: 86 MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPK--CPVTGKKIQGIPHLR 259 MVQRLTYR+R SY T SN+TR+ +TPG R+VY YTKK PK C V +++G+ +R Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVLPGRLRGVVAVR 60 Query: 260 PTEYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 370 P RLS+ ++ V + + Q +RI RAF Sbjct: 61 PKVL--MRLSKTKKHVQQGLWWLHVRQVCPDRIKRAF 95
>Q29223:RL34_PIG 60S ribosomal protein L34 - Sus scrofa (Pig)| Length = 117 Score = 72.4 bits (176), Expect = 1e-12 Identities = 43/97 (44%), Positives = 58/97 (59%), Gaps = 2/97 (2%) Frame = +2 Query: 86 MVQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPK--CPVTGKKIQGIPHLR 259 MVQRLTYR+R SY T SN+TR+ +TPG R+VY YTKK PK C V +++G+ +R Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60 Query: 260 PTEYKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 370 P RLS+ ++ V + VR+R RAF Sbjct: 61 PKVL--MRLSKTKKHVQPGLWWFHVAKCVRDRXKRAF 95
>Q8SSA2:RL34_ENCCU 60S ribosomal protein L34 - Encephalitozoon cuniculi| Length = 110 Score = 70.1 bits (170), Expect = 7e-12 Identities = 36/94 (38%), Positives = 54/94 (57%) Frame = +2 Query: 89 VQRLTYRKRHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTE 268 ++ + K +Y T+SN+ R V+TP G+LV + KK + +C + I +RP E Sbjct: 1 MKNVLIHKGATYKTRSNRRRKVRTPSGKLVNRRVKKHSKKHRCHECNAILGSIARMRPAE 60 Query: 269 YKRSRLSRNRRTVNRPYGGVLSGQAVRERIIRAF 370 + R ++S R VNRPYG G+ VRE+II AF Sbjct: 61 FSRQKVSARR--VNRPYGATTCGRCVREKIISAF 92
>P54053:RL34_METJA 50S ribosomal protein L34e - Methanococcus jannaschii| Length = 89 Score = 60.8 bits (146), Expect = 4e-09 Identities = 27/81 (33%), Positives = 49/81 (60%) Frame = +2 Query: 122 YATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSRNRR 301 Y ++S + +TPGGR+V Y +++ PKC + G ++ G+P RP E + +L +++R Sbjct: 6 YRSRSYRRIYRRTPGGRIVIHYKRRKPGKPKCAICGAELHGVPRGRPVEIR--KLPKSQR 63 Query: 302 TVNRPYGGVLSGQAVRERIIR 364 RPYGG L + ++ +I+ Sbjct: 64 RPERPYGGYLCPRCLKRLMIQ 84
>O26137:RL34_METTH 50S ribosomal protein L34e - Methanobacterium thermoautotrophicum| Length = 88 Score = 57.4 bits (137), Expect = 5e-08 Identities = 29/77 (37%), Positives = 43/77 (55%) Frame = +2 Query: 122 YATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSRNRR 301 Y ++S + KTPGGR V Y +K+ S C GK + G+P RP Y+ +LS++++ Sbjct: 6 YRSRSYKRIFKKTPGGRTVTHYRRKKPSKHVCAGCGKPLHGVPRGRP--YEIRKLSKSKK 63 Query: 302 TVNRPYGGVLSGQAVRE 352 NRPYGG R+ Sbjct: 64 RPNRPYGGYYCSSCARK 80
>Q8TZB2:RL34_METKA 50S ribosomal protein L34e - Methanopyrus kandleri| Length = 113 Score = 54.7 bits (130), Expect = 3e-07 Identities = 28/79 (35%), Positives = 44/79 (55%) Frame = +2 Query: 122 YATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSRNRR 301 Y ++S + +TPGGR V + KK + PKC G+++ G+ R E K + + ++ Sbjct: 6 YRSRSCRRVYKRTPGGRTVIHFEKKIPNWPKCGACGRRLNGVMRGRNVELKNA--PKTQK 63 Query: 302 TVNRPYGGVLSGQAVRERI 358 NRPYGGVL + R+ I Sbjct: 64 RPNRPYGGVLCPECARKLI 82
>Q8ZTJ2:RL34_PYRAE 50S ribosomal protein L34e - Pyrobaculum aerophilum| Length = 84 Score = 53.5 bits (127), Expect = 7e-07 Identities = 31/74 (41%), Positives = 39/74 (52%) Frame = +2 Query: 113 RHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSR 292 R +Y ++S + VKTPGGR V Y K+ PKCP+TG I G+ K R Sbjct: 3 RPAYRSRSVRRIKVKTPGGRTVIHYEKRAKGVPKCPITGLPIGGM------NKKVYRFGI 56 Query: 293 NRRTVNRPYGGVLS 334 R +RPYGGV S Sbjct: 57 KIRAPSRPYGGVYS 70
>P58026:RL34_AERPE 50S ribosomal protein L34e - Aeropyrum pernix| Length = 95 Score = 51.2 bits (121), Expect = 4e-06 Identities = 25/71 (35%), Positives = 37/71 (52%) Frame = +2 Query: 155 KTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSRNRRTVNRPYGGVLS 334 +TPGG V Y +++ +C G+ + G+P RP + RLS+ + RPYGGVL Sbjct: 22 RTPGGSTVVHYERRKPGPARCARCGRPLGGVPRGRPPRVR--RLSKTAKRPERPYGGVLC 79 Query: 335 GQAVRERIIRA 367 + E I A Sbjct: 80 STCLAEMIFEA 90
>Q9UZJ7:RL34_PYRAB 50S ribosomal protein L34e - Pyrococcus abyssi| Length = 91 Score = 48.5 bits (114), Expect = 2e-05 Identities = 21/66 (31%), Positives = 39/66 (59%) Frame = +2 Query: 122 YATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSRNRR 301 Y ++S + + V+TPGGR+V + +++ C + G+ + GIP RP E + +L + ++ Sbjct: 5 YRSRSWRRKYVRTPGGRVVIHFERRKPKIAHCAICGRPLNGIPRGRPVEMR--KLPKTKK 62 Query: 302 TVNRPY 319 RPY Sbjct: 63 RPERPY 68
>O74006:RL34_PYRHO 50S ribosomal protein L34e - Pyrococcus horikoshii| Length = 91 Score = 47.8 bits (112), Expect = 4e-05 Identities = 21/66 (31%), Positives = 37/66 (56%) Frame = +2 Query: 122 YATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSRNRR 301 Y ++S + + V+TPGGR+V + +K+ C + G+ + GIP RP E ++ ++ R Sbjct: 5 YRSRSWRRKYVRTPGGRVVVHFERKKPKIAHCAICGRPLNGIPRGRPVEMRKLPKTKKRP 64 Query: 302 TVNRPY 319 PY Sbjct: 65 ERPMPY 70
>Q5JJF7:RL34_PYRKO 50S ribosomal protein L34e - Pyrococcus kodakaraensis (Thermococcus| kodakaraensis) Length = 90 Score = 47.4 bits (111), Expect = 5e-05 Identities = 20/66 (30%), Positives = 39/66 (59%) Frame = +2 Query: 122 YATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSRNRR 301 Y ++S + + V+TPGGR V + +++ C + G+ + G+P RP+E + +L + ++ Sbjct: 5 YRSRSWRRKYVRTPGGRTVIHFERRKPKVAHCAMCGRPLNGVPRGRPSELR--KLPKTKK 62 Query: 302 TVNRPY 319 RPY Sbjct: 63 RPERPY 68
>Q8U2L3:RL34_PYRFU 50S ribosomal protein L34e - Pyrococcus furiosus| Length = 89 Score = 46.2 bits (108), Expect = 1e-04 Identities = 21/65 (32%), Positives = 38/65 (58%) Frame = +2 Query: 122 YATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSRNRR 301 Y ++S + + V+TPGGR+V + +K+ C + G+ + GIP RP E + +L + ++ Sbjct: 5 YRSRSWRRKYVRTPGGRVVIHFERKKPKIAHCAMCGRPLNGIPRGRPVEMR--KLPKTKK 62 Query: 302 TVNRP 316 RP Sbjct: 63 RPERP 67
>Q97ZQ6:RL34_SULSO 50S ribosomal protein L34e - Sulfolobus solfataricus| Length = 88 Score = 33.9 bits (76), Expect = 0.58 Identities = 21/82 (25%), Positives = 38/82 (46%) Frame = +2 Query: 113 RHSYATKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRLSR 292 R + ++S + VK P G+ V Y +KR C + K + G+ T + + S+ Sbjct: 3 RPALRSRSLRRVYVKLPSGKTVIHYERKRNDIAICAICKKPLHGV----KTNFLH-KYSK 57 Query: 293 NRRTVNRPYGGVLSGQAVRERI 358 + + RP+GG L + + I Sbjct: 58 SEKRPERPFGGYLCSSCLTQLI 79
>A2VEC9:SSPO_HUMAN SCO-spondin precursor - Homo sapiens (Human)| Length = 5147 Score = 33.5 bits (75), Expect = 0.75 Identities = 24/69 (34%), Positives = 27/69 (39%), Gaps = 7/69 (10%) Frame = -3 Query: 239 GSSCR*PDISARSPSSSCTGTQAS-------LLGF*QPWSG*TWWRSCAASGTSGAAPWR 81 G CR P PS C G + S L G PWS W C+ S T A P Sbjct: 3848 GQGCRGPRQDLECPSPDCPGAEGSTVEPVTGLPGGWGPWSS---WSPCSRSCTDPARPAW 3904 Query: 80 RPRCRSLLS 54 R R R L+ Sbjct: 3905 RSRTRLCLA 3913
>Q96G46:DUS3L_HUMAN tRNA-dihydrouridine synthase 3-like - Homo sapiens (Human)| Length = 650 Score = 30.8 bits (68), Expect = 4.9 Identities = 19/53 (35%), Positives = 26/53 (49%) Frame = +2 Query: 128 TKSNQTRVVKTPGGRLVYQYTKKRASGPKCPVTGKKIQGIPHLRPTEYKRSRL 286 T QT PG +L T+KRA G +G PH++PT Y ++RL Sbjct: 82 TADGQTEEAAEPGEQL---QTQKRARGQN--------KGRPHVKPTNYDKNRL 123
>A1YGK1:ZBT32_PANPA Zinc finger and BTB domain-containing protein 32 - Pan paniscus| (Pygmy chimpanzee) (Bonobo) Length = 487 Score = 30.4 bits (67), Expect = 6.4 Identities = 14/53 (26%), Positives = 27/53 (50%) Frame = +1 Query: 79 RRHGAAPDVPEAAQLRHQV*PDQGCQNPRREACVPVHEEEGERAEMSGHRQED 237 R G P+ +HQ P++ +NP RE P +++ E+ +G R+++ Sbjct: 111 RARGDRAKKPDPGLKKHQEEPEKPSRNPERELGDPGEKQKPEQVSRTGGREQE 163
>Q9Y2Y4:ZBT32_HUMAN Zinc finger and BTB domain-containing protein 32 - Homo sapiens| (Human) Length = 487 Score = 30.4 bits (67), Expect = 6.4 Identities = 14/53 (26%), Positives = 27/53 (50%) Frame = +1 Query: 79 RRHGAAPDVPEAAQLRHQV*PDQGCQNPRREACVPVHEEEGERAEMSGHRQED 237 R G P+ +HQ P++ +NP RE P +++ E+ +G R+++ Sbjct: 111 RARGDRAKKPDPGLKKHQEEPEKPSRNPERELGDPGEKQKPEQVSRTGGREQE 163
>Q3V4Z0:YCF2_ACOCL Protein ycf2 - Acorus calamus (Sweet flag)| Length = 2076 Score = 30.0 bits (66), Expect = 8.4 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 3/38 (7%) Frame = +1 Query: 370 PCGRAKDCEEGSEDPEDQGE---AAIKVKWLRLFFGGQ 474 PCG+ DC E S++ +D E + K W+R GGQ Sbjct: 1887 PCGKLFDCIEYSQEDDDDWEFWQSGTKYYWMRDSEGGQ 1924
>Q8NGK1:O51G1_HUMAN Olfactory receptor 51G1 - Homo sapiens (Human)| Length = 321 Score = 30.0 bits (66), Expect = 8.4 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = +2 Query: 578 WISLPVCYYFVFDGLT*VLGYITVLDTLC 664 WIS+P C+ + LT +LG +T+L +C Sbjct: 28 WISIPFCFIY----LTVILGNLTILHVIC 52 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 120,103,041 Number of extensions: 2627587 Number of successful extensions: 6391 Number of sequences better than 10.0: 34 Number of HSP's gapped: 6368 Number of HSP's successfully gapped: 34 Length of query: 226 Length of database: 100,686,439 Length adjustment: 109 Effective length of query: 117 Effective length of database: 70,788,284 Effective search space: 8282229228 Effective search space used: 8282229228 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
