ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf96k01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1AK110061: 33 0.18
2AK099208:Os01g0300200 33 0.18
3AK070568:Os01g0300200 33 0.18
4AK062011:Os01g0300200 33 0.18
5AK120604:Os06g0304600 30 2.0
6AK102614:Os06g0304600 30 2.0
7Os05g0104000:Os05g0104000 30 2.6
8AK108194:Os06g0484500 30 2.6
9AK066956:Os04g0502100 28 5.9
10AK109697:Os07g0561900 28 7.7
11AK070355:Os01g0925600 28 7.7 
>AK110061: |
          Length = 1151
 Score = 33.5 bits (75), Expect = 0.18
 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = -2

Query: 720  PRWPMEYIKMFLLVDGRSGPGISSIYATPFPTRTA-ELNNSYLTRLLSSVPRFGGNREDA 544
            P +  ++I+M L++    GP +S    T   +R   +L +S ++ LL+   RFGG  +DA
Sbjct: 927  PDYCTKFIEMALMLTADHGPAVSGAMNTIITSRAGKDLISSLVSGLLTIGDRFGGALDDA 986

Query: 543  LLQMCN 526
              +  N
Sbjct: 987  ATEFSN 992
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>AK099208:Os01g0300200 |
          Length = 608

 Score = 33.5 bits (75), Expect = 0.18
 Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = -2

Query: 720 PRWPMEYIKMFLLVDGRSGPGISSIYATPFPTRTA-ELNNSYLTRLLSSVPRFGGNREDA 544
           PR+  ++I+M +++    GP +S  + +    R   +L +S ++ LL+  PRFGG  +DA
Sbjct: 396 PRYCTQFIEMCIMLCADHGPCVSGAHNSIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDA 455
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>AK070568:Os01g0300200 |
          Length = 608

 Score = 33.5 bits (75), Expect = 0.18
 Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = -2

Query: 720 PRWPMEYIKMFLLVDGRSGPGISSIYATPFPTRTA-ELNNSYLTRLLSSVPRFGGNREDA 544
           PR+  ++I+M +++    GP +S  + +    R   +L +S ++ LL+  PRFGG  +DA
Sbjct: 396 PRYCTQFIEMCIMLCADHGPCVSGAHNSIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDA 455
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>AK062011:Os01g0300200 |
          Length = 487

 Score = 33.5 bits (75), Expect = 0.18
 Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = -2

Query: 720 PRWPMEYIKMFLLVDGRSGPGISSIYATPFPTRTA-ELNNSYLTRLLSSVPRFGGNREDA 544
           PR+  ++I+M +++    GP +S  + +    R   +L +S ++ LL+  PRFGG  +DA
Sbjct: 275 PRYCTQFIEMCIMLCADHGPCVSGAHNSIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDA 334
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>AK120604:Os06g0304600 |
          Length = 469

 Score = 30.0 bits (66), Expect = 2.0
 Identities = 17/54 (31%), Positives = 31/54 (57%)
 Frame = +3

Query: 30  TLATNQPGEAIFLISGQSSAAASLVKFEASRINLAPFSPLVEPPSPHQAIPSLI 191
           ++ +  PG+  +     SS  ASL     S I++A  +PL  PPS ++++P++I
Sbjct: 297 SIGSYNPGQYSYTPMASSSLDASLYFVTLSGISVAG-APLAVPPSEYRSLPTII 349
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>AK102614:Os06g0304600 |
          Length = 469

 Score = 30.0 bits (66), Expect = 2.0
 Identities = 17/54 (31%), Positives = 31/54 (57%)
 Frame = +3

Query: 30  TLATNQPGEAIFLISGQSSAAASLVKFEASRINLAPFSPLVEPPSPHQAIPSLI 191
           ++ +  PG+  +     SS  ASL     S I++A  +PL  PPS ++++P++I
Sbjct: 297 SIGSYNPGQYSYTPMASSSLDASLYFVTLSGISVAG-APLAVPPSEYRSLPTII 349
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>Os05g0104000:Os05g0104000 |
          Length = 830

 Score = 29.6 bits (65), Expect = 2.6
 Identities = 37/110 (33%), Positives = 43/110 (39%), Gaps = 14/110 (12%)
 Frame = +3

Query: 129 LAPFSPL--VEPPSPHQAIPSLIHDWD---PL*VE---SALLPQ*PFASALATGD-PLRL 281
           L P  PL  V PPS   A  S   D     P   E   S+L P  P AS+   G  P+ L
Sbjct: 313 LRPLPPLPRVGPPSGEFASRSSASDPSTAPPAAAEASSSSLSPSSPSASSPTLGSSPVHL 372

Query: 282 RGPFDLQEDQ*LAGIPFPPSEETQKSPIAGDDRWNPAT-----ARPEEEE 416
           R P  + + +  A  P PP    Q         WNP       A P EEE
Sbjct: 373 RPP-SIPQPRGRAPNPSPPKRRPQPPEPMAAHAWNPFVPMPPQAPPSEEE 421
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>AK108194:Os06g0484500 |
          Length = 214

 Score = 29.6 bits (65), Expect = 2.6
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +3

Query: 24  QATLATNQPGEAIFLISGQSSAAASLVKFEASRINLAPFSPLVEPPS 164
           +A +  +QP      +   ++A A  VK+E  RI++ P  P  +PP+
Sbjct: 165 KALVKYHQPATLFLQVYTVAAAGAVFVKYEKERISVWPGPPATKPPA 211
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>AK066956:Os04g0502100 |
          Length = 335

 Score = 28.5 bits (62), Expect = 5.9
 Identities = 17/41 (41%), Positives = 20/41 (48%)
 Frame = -1

Query: 436 FDQSRAPSSSSGRAVAGFQRSSPAIGDFWVSSDGGNGIPAS 314
           FD S A SSS     AG   SSPA+     S+   +G  AS
Sbjct: 34  FDPSMASSSSMAATTAGVPGSSPAMAPLLTSARMSSGSSAS 74
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>AK109697:Os07g0561900 |
          Length = 235

 Score = 28.1 bits (61), Expect = 7.7
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 713 GLWST*KCFYWLMEEAVPGSPASMRLHF 630
           G WS    FY++  ++ P SP   RLHF
Sbjct: 140 GHWSRYIAFYFVQHDSSPASPYLPRLHF 167
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>AK070355:Os01g0925600 |
          Length = 229

 Score = 28.1 bits (61), Expect = 7.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 500 NGHAFCEARLHIWRRASSRLPPNLGTE 580
           NGH   E  ++ W R+SSR+P  +  E
Sbjct: 133 NGHGSSEVEINPWLRSSSRIPNRIHPE 159


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 25,415,775
Number of extensions: 619546
Number of successful extensions: 1666
Number of sequences better than 10.0: 11
Number of HSP's gapped: 1663
Number of HSP's successfully gapped: 11
Length of query: 275
Length of database: 15,399,855
Length adjustment: 99
Effective length of query: 176
Effective length of database: 11,435,796
Effective search space: 2012700096
Effective search space used: 2012700096
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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