ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf98m03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY972629.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG095 cyclic nucleotide-gated ion channel 1 (CNGC1) gene, partial cds Length = 5200 Score = 462 bits (233), Expect = e-126 Identities = 410/465 (88%), Gaps = 3/465 (0%) Strand = Plus / Plus Query: 724 gtgatcaaagagtctaaaccccaaaaggtccaacctctagaactgagctttgggcctcct 783 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 173 gtgatcaaagagtctaaaccccaaaaggtccaacccctagaactgagctttgggcctcct 232 Query: 784 tttataggcaaaaggggtcaccaacagtgctctgtagtgggtacacgagtcgcatagtga 843 |||||||||||| |||||||||| |||||||||| |||||| ||||||| ||||||||| Sbjct: 233 tttataggcaaa-ggggtcaccagcagtgctctgaggtgggttcacgagttgcatagtga 291 Query: 844 acagggttcaccgctatctatctaccgcagtgtcaggagcagtaaatgccttgtcagccc 903 ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 292 acagggttcaccgctatctatgtaccgcagtgtcaggggcagtaaatgccttgtcagccc 351 Query: 904 ccctaacctatatcatgatggtatcgacacatatcccggcgttttgagacctgggcgttg 963 || | |||| || | | ||| || ||||| || || || || |||| |||||||| ||| Sbjct: 352 cc-tgacctgcatgaaggtggcattgacacgtacccaggtgtattgacacctgggctttg 410 Query: 964 tgctggcacatgaggcatgcgctggagcggtggcagtcggtggcactgtgtcaggaggga 1023 |||||| || |||| ||||||| |||||||| |||||||||||| |||| |||| ||| Sbjct: 411 tgctggtgcacgagggatgcgctagagcggtgacagtcggtggcattgtgacagggggg- 469 Query: 1024 cacctggcgggcgaagggggcttgccggcctggtgtccttgccggtggcctaacctgtct 1083 |||||||||||||||||| || |||||||||||||||||||| | ||||||||| |||| Sbjct: 470 cacctggcgggcgaagggagcctgccggcctggtgtccttgcttgcggcctaacccgtct 529 Query: 1084 tcccggcaaggagagctcgccggggtcttggacgtcttcccggcaaggagggcttgccgg 1143 ||||||||||||| ||| || |||| |||| ||||||| | ||||||||||||||||| Sbjct: 530 tcccggcaaggagggcttgcgggggccttgcgagtcttcctgacaaggagggcttgccgg 589 Query: 1144 ggccttgcgtgtcttcccgacaaggaggacttgccggggccttgt 1188 ||||||| | ||||||||| |||||||| ||||| |||||||||| Sbjct: 590 ggccttgtgggtcttcccggcaaggagggcttgctggggccttgt 634 Score = 147 bits (74), Expect = 2e-31 Identities = 128/146 (87%) Strand = Plus / Plus Query: 1154 gtcttcccgacaaggaggacttgccggggccttgtttatcttcccggcaaggagagcttg 1213 ||||||||| |||||||| ||||| ||||||||| |||||| | ||||||| ||||| Sbjct: 526 gtcttcccggcaaggagggcttgcgggggccttgcgagtcttcctgacaaggagggcttg 585 Query: 1214 ccggggccctgggtgtcttcccggcaaggagggcttgccggggccttgtagcttggactt 1273 |||||||| || | |||||||||||||||||||||||| ||||||||||||| ||| || Sbjct: 586 ccggggccttgtgggtcttcccggcaaggagggcttgctggggccttgtagcctgggctg 645 Query: 1274 gttcttcacacccttggaggggtgtg 1299 ||| |||||||||||||||||||||| Sbjct: 646 gttgttcacacccttggaggggtgtg 671 Score = 141 bits (71), Expect = 1e-29 Identities = 120/135 (88%), Gaps = 1/135 (0%) Strand = Plus / Plus Query: 1299 ggccttgtagcttggacttgttcttcacacccttggaggggtgtggccttggtgagcttg 1358 ||||||||||| ||| || ||| |||||||||||||||||||||| || || |||| || Sbjct: 627 ggccttgtagcctgggctggttgttcacacccttggaggggtgtgaactcggcgagcctg 686 Query: 1359 ggttatcttcccgtcag-ccttcttcatgcactgccgccaagggtgttgccggtgcccgt 1417 ||||||||||||||| | |||||||| || |||||||||||||||| ||| ||||||||| Sbjct: 687 ggttatcttcccgtcggtccttcttcgtgtactgccgccaagggtgctgctggtgcccgt 746 Query: 1418 gcacaagtctggggc 1432 ||||||||||||||| Sbjct: 747 gcacaagtctggggc 761 Score = 139 bits (70), Expect = 5e-29 Identities = 97/106 (91%) Strand = Plus / Plus Query: 1116 cgtcttcccggcaaggagggcttgccggggccttgcgtgtcttcccgacaaggaggactt 1175 ||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||| ||| Sbjct: 525 cgtcttcccggcaaggagggcttgcgggggccttgcgagtcttcctgacaaggagggctt 584 Query: 1176 gccggggccttgtttatcttcccggcaaggagagcttgccggggcc 1221 ||||||||||||| |||||||||||||||| |||||| |||||| Sbjct: 585 gccggggccttgtgggtcttcccggcaaggagggcttgctggggcc 630 Score = 75.8 bits (38), Expect = 6e-10 Identities = 65/73 (89%), Gaps = 2/73 (2%) Strand = Plus / Plus Query: 626 ggatcccttgatcgttcggcgg--ggagagaagtggcgccaagagcagagctagcgagca 683 |||||||||||| ||||||||| ||||||| |||||||||||||| || ||||||| || Sbjct: 1 ggatcccttgattgttcggcggagggagagaggtggcgccaagagcggaactagcgatca 60 Query: 684 gcaccgacaaggt 696 |||||||||||| Sbjct: 61 acaccgacaaggt 73
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 97.6 bits (49), Expect = 2e-16 Identities = 138/165 (83%), Gaps = 2/165 (1%) Strand = Plus / Plus Query: 464 ggaggatgacgtcgcggcggcgctcaccgaggccggcgaggtcgaggaggtgcggctcgt 523 |||||| ||||| ||| ||||||| | || |||||||| || ||||||||||||||||| Sbjct: 15665062 ggaggaggacgtggcgcgggcgctcgcggacgccggcgatgtggaggaggtgcggctcgt 15665121 Query: 524 ccgggatccggcgcagccgcagct-taacaagggctttgcctttgcacgtttcgccgagg 582 |||||||||||| | |||| ||| ||||||||||| ||||| | || ||||||| | Sbjct: 15665122 gcgggatccggcggacccgc-gctccaacaagggcttcgccttcgtgcgattcgccgccg 15665180 Query: 583 tctggcaggcgcggtgggcagccaacgacctccgcacggctatgg 627 |||||||||||||||||| ||| ||||| |||||||||| |||| Sbjct: 15665181 cctggcaggcgcggtgggctgccgacgacgtccgcacggccatgg 15665225 Score = 54.0 bits (27), Expect = 0.002 Identities = 27/27 (100%) Strand = Plus / Plus Query: 150 cggccgctcttcgacctcaacgtcgcc 176 ||||||||||||||||||||||||||| Sbjct: 15664769 cggccgctcttcgacctcaacgtcgcc 15664795
>dbj|AP005752.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0075N02 Length = 186945 Score = 97.6 bits (49), Expect = 2e-16 Identities = 138/165 (83%), Gaps = 2/165 (1%) Strand = Plus / Plus Query: 464 ggaggatgacgtcgcggcggcgctcaccgaggccggcgaggtcgaggaggtgcggctcgt 523 |||||| ||||| ||| ||||||| | || |||||||| || ||||||||||||||||| Sbjct: 62919 ggaggaggacgtggcgcgggcgctcgcggacgccggcgatgtggaggaggtgcggctcgt 62978 Query: 524 ccgggatccggcgcagccgcagct-taacaagggctttgcctttgcacgtttcgccgagg 582 |||||||||||| | |||| ||| ||||||||||| ||||| | || ||||||| | Sbjct: 62979 gcgggatccggcggacccgc-gctccaacaagggcttcgccttcgtgcgattcgccgccg 63037 Query: 583 tctggcaggcgcggtgggcagccaacgacctccgcacggctatgg 627 |||||||||||||||||| ||| ||||| |||||||||| |||| Sbjct: 63038 cctggcaggcgcggtgggctgccgacgacgtccgcacggccatgg 63082 Score = 54.0 bits (27), Expect = 0.002 Identities = 27/27 (100%) Strand = Plus / Plus Query: 150 cggccgctcttcgacctcaacgtcgcc 176 ||||||||||||||||||||||||||| Sbjct: 62626 cggccgctcttcgacctcaacgtcgcc 62652
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Plus Query: 475 tcgcggcggcgctcaccgaggccggcg 501 |||||||||||||||| |||||||||| Sbjct: 63587 tcgcggcggcgctcactgaggccggcg 63613
>emb|CT485648.1| Leptosphaeria maculans : genomic region surrounding the avirulence gene AvrLm1 (AM084345) Length = 83892 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 agtagactacctagcagcaaaa 68 |||||||||||||||||||||| Sbjct: 45007 agtagactacctagcagcaaaa 45028
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 gatgacgtcgcggcggcgctca 489 |||||||||||||||||||||| Sbjct: 4975373 gatgacgtcgcggcggcgctca 4975352
>emb|AM114193.2| Uncultured methanogenic archaeon RC-I complete genome Length = 3179916 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 490 ccgaggccggcgaggtcgagga 511 |||||||||||||||||||||| Sbjct: 2372674 ccgaggccggcgaggtcgagga 2372695
>gb|DQ384263.1| Orthoclada laxa clone TS2D tasselseed2-like short-chain dehydrogenase/reductase gene, partial cds Length = 747 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 309 gcggcgccggcgccgaccgaggagga 334 |||||||||||||||| ||||||||| Sbjct: 601 gcggcgccggcgccgagcgaggagga 626
>emb|CT025708.8| Mouse DNA sequence from clone RP24-331C1 on chromosome 17, complete sequence Length = 205598 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2015 attttactttgaccactaatttgttt 2040 ||||| |||||||||||||||||||| Sbjct: 80750 attttcctttgaccactaatttgttt 80725
>gb|AC154599.2| Mus musculus BAC clone RP23-250J9 from chromosome 17, complete sequence Length = 141431 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2015 attttactttgaccactaatttgttt 2040 ||||| |||||||||||||||||||| Sbjct: 5516 attttcctttgaccactaatttgttt 5491
>gb|AF546141.1| Streptomyces ghanaensis UnbL (unbL), UnbV (unbV), UnbU (unbU), PksE (pksE), and TebC (tebC) genes, complete cds Length = 10371 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 307 cggcggcgccggcgccgaccgaggag 332 ||||| |||||||||||||||||||| Sbjct: 1242 cggcgacgccggcgccgaccgaggag 1217
>gb|AC166160.3| Mus musculus BAC clone RP24-86O19 from chromosome 7, complete sequence Length = 221792 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1329 ccttggaggggtgtggccttgg 1350 |||||||||||||||||||||| Sbjct: 108229 ccttggaggggtgtggccttgg 108250 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1329 ccttggaggggtgtggccttgg 1350 |||||||||||||||||||||| Sbjct: 108245 ccttggaggggtgtggccttgg 108266 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1285 ccttggaggggtgtggccttg 1305 ||||||||||||||||||||| Sbjct: 108229 ccttggaggggtgtggccttg 108249 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1285 ccttggaggggtgtggccttg 1305 ||||||||||||||||||||| Sbjct: 108245 ccttggaggggtgtggccttg 108265
>emb|CT485670.1| Leptosphaeria maculans : genomic region surrounding the avirulence gene AvrLm1 (AM084345) Length = 86247 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 tagactacctagcagcaaaaa 69 ||||||||||||||||||||| Sbjct: 60611 tagactacctagcagcaaaaa 60631
>emb|CT485664.1| Leptosphaeria maculans : genomic region surrounding the avirulence gene AvrLm1 (AM084345) Length = 83274 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 tagactacctagcagcaaaaa 69 ||||||||||||||||||||| Sbjct: 23091 tagactacctagcagcaaaaa 23071
>emb|CT485662.1| Leptosphaeria maculans : genomic region surrounding the avirulence gene AvrLm1 (AM084345) Length = 79405 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 tagactacctagcagcaaaaa 69 ||||||||||||||||||||| Sbjct: 14092 tagactacctagcagcaaaaa 14072
>emb|CT485647.1| Leptosphaeria maculans : genomic region surrounding the avirulence gene AvrLm1 (AM084345) Length = 103392 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 tagactacctagcagcaaaaa 69 ||||||||||||||||||||| Sbjct: 17403 tagactacctagcagcaaaaa 17423 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 tagactacctagcagcaaaaa 69 ||||||||||||||||||||| Sbjct: 51482 tagactacctagcagcaaaaa 51502
>emb|CR936337.8| Zebrafish DNA sequence from clone RP71-78K5 in linkage group 6, complete sequence Length = 143779 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2007 tttgcatgattttactttgac 2027 ||||||||||||||||||||| Sbjct: 97152 tttgcatgattttactttgac 97132
>emb|CT836252.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA108M14, full insert sequence Length = 1643 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 gaggccggcgaggtcgaggag 512 ||||||||||||||||||||| Sbjct: 165 gaggccggcgaggtcgaggag 145
>dbj|AK243685.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100090N09, full insert sequence Length = 1754 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 gaggccggcgaggtcgaggag 512 ||||||||||||||||||||| Sbjct: 167 gaggccggcgaggtcgaggag 147
>emb|AM286690.1| Alcanivorax borkumensis SK2, complete genome Length = 3120143 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1388 actgccgccaagggtgttgccggtg 1412 ||||||||| ||||||||||||||| Sbjct: 2604680 actgccgcccagggtgttgccggtg 2604656
>emb|CT485789.1| Leptosphaeria maculans : genomic region surrounding the avirulence gene AvrLm1 (AM084345) Length = 85662 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 tagactacctagcagcaaaaa 69 ||||||||||||||||||||| Sbjct: 46351 tagactacctagcagcaaaaa 46331
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 8.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 490 ccgaggccggcgaggtcgaggaggtgcggctcg 522 ||||||| ||||||||||| ||||||| ||||| Sbjct: 755059 ccgaggcgggcgaggtcgaagaggtgccgctcg 755091
>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome condensation factor (CCF), putative resistance protein (RGA-2), putative resistance protein (RGA2) and putative nodulin-like-like protein (NLL) gene, complete cds; and retrotransposons Josephine, Angela-2, Angela-4, Heidi, Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5, Barbara, Isabelle, Erika-2, and Claudia Length = 211009 Score = 42.1 bits (21), Expect = 8.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 774 tgggcctccttttataggcaaaaggggtcaccaacag 810 |||||||||||||||| || ||||||||||| |||| Sbjct: 62218 tgggcctccttttatatgctcaaggggtcaccgacag 62254
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2189 gggacagagggagtacttcct 2209 ||||||||||||||||||||| Sbjct: 123583 gggacagagggagtacttcct 123563
>gb|BC063276.1| Homo sapiens cDNA clone IMAGE:30344932, partial cds Length = 4948 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1872 aagggaaagtattggtagagg 1892 ||||||||||||||||||||| Sbjct: 2010 aagggaaagtattggtagagg 1990
>gb|AF532105.1|AF532104S2 Aegilops tauschii strain TA1649 cosmid 69-7-1 putative GAG-POL precursor, gene, complete cds; and unknown genes Length = 11825 Score = 42.1 bits (21), Expect = 8.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 2063 ttaaaaatgataccatgggaaactttgttcaaatacaaatc 2103 |||||||| ||| || ||||||| |||||||||||||||| Sbjct: 9700 ttaaaaattatataattggaaactatgttcaaatacaaatc 9740
>ref|XM_662923.1| Cryptosporidium hominis TU502 protein kinase domain (Chro.10329) partial mRNA Length = 2256 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2028 cactaatttgtttaataacat 2048 ||||||||||||||||||||| Sbjct: 1531 cactaatttgtttaataacat 1511
>ref|XM_628112.1| Cryptosporidium parvum Iowa II protein kinase CMGC group (cgd1_2960), partial mRNA Length = 2298 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2028 cactaatttgtttaataacat 2048 ||||||||||||||||||||| Sbjct: 1573 cactaatttgtttaataacat 1553
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 gaggccggcgaggtcgaggag 512 ||||||||||||||||||||| Sbjct: 9883068 gaggccggcgaggtcgaggag 9883088
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2189 gggacagagggagtacttcct 2209 ||||||||||||||||||||| Sbjct: 20867782 gggacagagggagtacttcct 20867762
>emb|AL606662.6| Human DNA sequence from clone RP13-643D4 on chromosome X Contains a pseudogene similar to part of poly(A) polymerase alpha (PAPOLA), complete sequence Length = 84246 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1271 cttgttcttcacacccttgga 1291 ||||||||||||||||||||| Sbjct: 43600 cttgttcttcacacccttgga 43620 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1315 cttgttcttcacacccttgga 1335 ||||||||||||||||||||| Sbjct: 43600 cttgttcttcacacccttgga 43620
>dbj|AB209004.1| Homo sapiens premature mRNA for Hypothetical protein DKFZp686O08126 variant Length = 8338 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1872 aagggaaagtattggtagagg 1892 ||||||||||||||||||||| Sbjct: 1406 aagggaaagtattggtagagg 1386
>emb|AL050309.4|HSJ148M19 Human DNA sequence from clone RP1-148M19 on chromosome Xp11.22-11.3 Contains the 5' end of the KLF8 gene for Kruppel-like factor 8 and a ribosomal protein L23a (RPL23A) pseudogene, complete sequence Length = 177483 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1872 aagggaaagtattggtagagg 1892 ||||||||||||||||||||| Sbjct: 8515 aagggaaagtattggtagagg 8535
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 522 gtccgggatccggcgcagccg 542 ||||||||||||||||||||| Sbjct: 8878954 gtccgggatccggcgcagccg 8878934
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1398 agggtgttgccggtgcccgtg 1418 ||||||||||||||||||||| Sbjct: 250674 agggtgttgccggtgcccgtg 250654
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1398 agggtgttgccggtgcccgtg 1418 ||||||||||||||||||||| Sbjct: 322361 agggtgttgccggtgcccgtg 322341
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1398 agggtgttgccggtgcccgtg 1418 ||||||||||||||||||||| Sbjct: 9885 agggtgttgccggtgcccgtg 9905
>emb|CR352285.4| Zebrafish DNA sequence from clone CH211-210K13 in linkage group 11, complete sequence Length = 133334 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2007 tttgcatgattttactttgac 2027 ||||||||||||||||||||| Sbjct: 52339 tttgcatgattttactttgac 52319
>emb|BX323071.16| Zebrafish DNA sequence from clone DKEYP-51F12, complete sequence Length = 208116 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2147 caaacttcatttttggagtgt 2167 ||||||||||||||||||||| Sbjct: 189586 caaacttcatttttggagtgt 189606
>emb|BX649302.22| Zebrafish DNA sequence from clone CH211-248I6 in linkage group 12, complete sequence Length = 154089 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2147 caaacttcatttttggagtgt 2167 ||||||||||||||||||||| Sbjct: 135903 caaacttcatttttggagtgt 135923
>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0063H02 Length = 152326 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 gaggccggcgaggtcgaggag 512 ||||||||||||||||||||| Sbjct: 79703 gaggccggcgaggtcgaggag 79723
>emb|CR523140.1| Gallus gallus finished cDNA, clone ChEST1036e5 Length = 1056 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1692 cagtgagatcaaagggctttg 1712 ||||||||||||||||||||| Sbjct: 513 cagtgagatcaaagggctttg 493
>emb|BX641066.1|HSM806830 Homo sapiens mRNA; cDNA DKFZp686O08126 (from clone DKFZp686O08126) Length = 5561 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1872 aagggaaagtattggtagagg 1892 ||||||||||||||||||||| Sbjct: 1399 aagggaaagtattggtagagg 1379
>emb|CT005242.3| Pan troglodytes chromosome X clone PTB-112O07 map Xq28, complete sequence Length = 188913 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1872 aagggaaagtattggtagagg 1892 ||||||||||||||||||||| Sbjct: 175849 aagggaaagtattggtagagg 175869
>dbj|AB031392.1| Arthrobacter sp. Q36 genes for hypothetical protein, glycogen debranching enzyme, maltooligosyltrehalose synthase, complete cds Length = 4309 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1398 agggtgttgccggtgcccgtg 1418 ||||||||||||||||||||| Sbjct: 1990 agggtgttgccggtgcccgtg 1970 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 343,736,958 Number of extensions: 19200675 Number of successful extensions: 104525 Number of sequences better than 10.0: 45 Number of HSP's gapped: 104514 Number of HSP's successfully gapped: 56 Length of query: 2306 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2283 Effective length of database: 18,503,978,556 Effective search space: 42244583043348 Effective search space used: 42244583043348 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
