Clone Name | FLbaf96j12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AK058318:Os12g0115900 | 358 | 3e-99 | 2 | AK059833:Os11g0116400 | 357 | 5e-99 | 3 | AK073074:Os03g0806400 | 45 | 9e-05 | 4 | AK120804:Os06g0597600 | 29 | 5.3 | 5 | Os04g0630600:Os04g0630600 | 29 | 5.4 | 6 | Os12g0429600:Os12g0429600 | 28 | 7.0 | 7 | AK070363:Os01g0107900 | 28 | 9.2 |
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>AK058318:Os12g0115900 | Length = 229 Score = 358 bits (919), Expect = 3e-99 Identities = 173/188 (92%), Positives = 184/188 (97%) Frame = +1 Query: 175 TRLYALSSNDIKVGFNLEVDGAPWKILEFLHVKPGKGAAFVRTKMRNYITGNTVEKTFRA 354 TR+YALSSNDI+VG NLEVDGAPWK+LEFLHVKPGKGAAFVRTKMRNYITGNTV+KTFRA Sbjct: 42 TRVYALSSNDIRVGSNLEVDGAPWKVLEFLHVKPGKGAAFVRTKMRNYITGNTVDKTFRA 101 Query: 355 GSTIQEASISKETKQFTYKDGSQFVFMDLTSFEESRLNESDVGDRQKWLKEGMDCTLLYW 534 GSTI EASISKETKQFTYKDG+QFVFMDLT+FEESRLNESDVGDRQKWLKEGMDC LLYW Sbjct: 102 GSTIPEASISKETKQFTYKDGAQFVFMDLTTFEESRLNESDVGDRQKWLKEGMDCNLLYW 161 Query: 535 NGRIIDFDLPITVRLTVTETDPGQGDSAQGGTKPATLETGAVVNVPSFVDVGDDVLIDSR 714 NGRIIDFDLPITVRLTVT+TDPGQGDSAQGGTKPAT+ETGAVV VPSFV+VGDD+LIDSR Sbjct: 162 NGRIIDFDLPITVRLTVTDTDPGQGDSAQGGTKPATVETGAVVTVPSFVNVGDDILIDSR 221 Query: 715 TGQYMSRA 738 TGQYM+RA Sbjct: 222 TGQYMNRA 229
>AK059833:Os11g0116400 | Length = 229 Score = 357 bits (917), Expect = 5e-99 Identities = 172/188 (91%), Positives = 184/188 (97%) Frame = +1 Query: 175 TRLYALSSNDIKVGFNLEVDGAPWKILEFLHVKPGKGAAFVRTKMRNYITGNTVEKTFRA 354 TR+YALSSNDI+VG NLEVDGAPWK++EFLHVKPGKGAAFVRTKMRNYITGNTV+KTFRA Sbjct: 42 TRVYALSSNDIRVGSNLEVDGAPWKVIEFLHVKPGKGAAFVRTKMRNYITGNTVDKTFRA 101 Query: 355 GSTIQEASISKETKQFTYKDGSQFVFMDLTSFEESRLNESDVGDRQKWLKEGMDCTLLYW 534 GSTI EASISKETKQFTYKDG+QFVFMDLT+FEESRLNESDVGDRQKWLKEGMDC LLYW Sbjct: 102 GSTIPEASISKETKQFTYKDGAQFVFMDLTTFEESRLNESDVGDRQKWLKEGMDCNLLYW 161 Query: 535 NGRIIDFDLPITVRLTVTETDPGQGDSAQGGTKPATLETGAVVNVPSFVDVGDDVLIDSR 714 NGRIIDFDLPITVRLTVT+TDPGQGDSAQGGTKPAT+ETGAVV VPSFV+VGDD+LIDSR Sbjct: 162 NGRIIDFDLPITVRLTVTDTDPGQGDSAQGGTKPATVETGAVVTVPSFVNVGDDILIDSR 221 Query: 715 TGQYMSRA 738 TGQYM+RA Sbjct: 222 TGQYMNRA 229
>AK073074:Os03g0806400 | Length = 97 Score = 44.7 bits (104), Expect = 9e-05 Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 3/88 (3%) Frame = +1 Query: 367 QEASISKETKQFTY--KDGSQFVFMDLTSFEESRLNESDVGDRQKWLKEGMDCTLLYWNG 540 + + + E K FTY ++G M+ +FE+ +++ G +LK+ M TL Y++G Sbjct: 8 KHSGVFVEEKSFTYLYQEGDNVTLMEPETFEQLEVSKELFGKTAAYLKDEMKVTLQYFDG 67 Query: 541 RIIDFDLPITVRLTVTETDP-GQGDSAQ 621 R + +P V TV E P +G +AQ Sbjct: 68 RPMSASVPPRVTCTVVEAQPHSKGITAQ 95
>AK120804:Os06g0597600 | Length = 431 Score = 28.9 bits (63), Expect = 5.3 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 5/70 (7%) Frame = -2 Query: 383 EIEASWIVLPARKVFSTVLPVI*LRIFVLTKAAPFPGLTWRNSRIF----HGAPSTSR-L 219 E E W AR + T P + V+ A P PGL+W R+ P+T L Sbjct: 273 EAERVWCPELARLIGETAEPFV----NVIYDAEPLPGLSWAGGRVALVGDAAHPTTPHGL 328 Query: 218 NPTLMSLLDS 189 T MS+LD+ Sbjct: 329 RSTNMSILDA 338
>Os04g0630600:Os04g0630600 | Length = 399 Score = 28.9 bits (63), Expect = 5.4 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = -1 Query: 897 DRISRPGVEGPSMINEKKKKRQCCGLFNGNYTKNA 793 D +SR E PS ++ K CC L++ + KN+ Sbjct: 31 DMLSRRRSETPSSVSPLKDSTNCCDLYSDDMAKNS 65
>Os12g0429600:Os12g0429600 | Length = 1597 Score = 28.5 bits (62), Expect = 7.0 Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 9/45 (20%) Frame = -2 Query: 707 SIRTSSPTSTKDGTL---------TTAPVSRVAGFVPPCALSPCP 600 S +SS TST DG L TTAP S VPP A S P Sbjct: 75 STTSSSATSTSDGALRIPASTAPATTAPASTAPSSVPPGAPSIPP 119
>AK070363:Os01g0107900 | Length = 627 Score = 28.1 bits (61), Expect = 9.2 Identities = 27/125 (21%), Positives = 57/125 (45%), Gaps = 2/125 (1%) Frame = +1 Query: 253 LEFLHVKPGKGAAFVRTKMRNYITGNTVEKTFRAG--STIQEASISKETKQFTYKDGSQF 426 ++ +H++P KG T + ++ T E + S+++ ++IS+ D + Sbjct: 205 MKVVHMRPTKG-----TSSASSVSSATAESPAKEENESSLESSAISEGITDEANTDTT-- 257 Query: 427 VFMDLTSFEESRLNESDVGDRQKWLKEGMDCTLLYWNGRIIDFDLPITVRLTVTETDPGQ 606 L E+ E DVG+ + EG+ L ++ RI +F + + + + V+E Sbjct: 258 ----LKGDEDVEDKEQDVGNAKDSSVEGLKSVLNFFKSRIPEFKVQV-INVDVSEEAELA 312 Query: 607 GDSAQ 621 DS++ Sbjct: 313 SDSSE 317 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 24,686,892 Number of extensions: 558809 Number of successful extensions: 1698 Number of sequences better than 10.0: 7 Number of HSP's gapped: 1697 Number of HSP's successfully gapped: 7 Length of query: 309 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 209 Effective length of database: 11,395,755 Effective search space: 2381712795 Effective search space used: 2381712795 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)