ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf96j12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK058318:Os12g0115900 358 3e-99
2AK059833:Os11g0116400 357 5e-99
3AK073074:Os03g0806400 45 9e-05
4AK120804:Os06g0597600 29 5.3
5Os04g0630600:Os04g0630600 29 5.4
6Os12g0429600:Os12g0429600 28 7.0
7AK070363:Os01g0107900 28 9.2

>AK058318:Os12g0115900 |
          Length = 229
 Score =  358 bits (919), Expect = 3e-99
 Identities = 173/188 (92%), Positives = 184/188 (97%)
 Frame = +1

Query: 175 TRLYALSSNDIKVGFNLEVDGAPWKILEFLHVKPGKGAAFVRTKMRNYITGNTVEKTFRA 354
           TR+YALSSNDI+VG NLEVDGAPWK+LEFLHVKPGKGAAFVRTKMRNYITGNTV+KTFRA
Sbjct: 42  TRVYALSSNDIRVGSNLEVDGAPWKVLEFLHVKPGKGAAFVRTKMRNYITGNTVDKTFRA 101

Query: 355 GSTIQEASISKETKQFTYKDGSQFVFMDLTSFEESRLNESDVGDRQKWLKEGMDCTLLYW 534
           GSTI EASISKETKQFTYKDG+QFVFMDLT+FEESRLNESDVGDRQKWLKEGMDC LLYW
Sbjct: 102 GSTIPEASISKETKQFTYKDGAQFVFMDLTTFEESRLNESDVGDRQKWLKEGMDCNLLYW 161

Query: 535 NGRIIDFDLPITVRLTVTETDPGQGDSAQGGTKPATLETGAVVNVPSFVDVGDDVLIDSR 714
           NGRIIDFDLPITVRLTVT+TDPGQGDSAQGGTKPAT+ETGAVV VPSFV+VGDD+LIDSR
Sbjct: 162 NGRIIDFDLPITVRLTVTDTDPGQGDSAQGGTKPATVETGAVVTVPSFVNVGDDILIDSR 221

Query: 715 TGQYMSRA 738
           TGQYM+RA
Sbjct: 222 TGQYMNRA 229



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>AK059833:Os11g0116400 |
          Length = 229

 Score =  357 bits (917), Expect = 5e-99
 Identities = 172/188 (91%), Positives = 184/188 (97%)
 Frame = +1

Query: 175 TRLYALSSNDIKVGFNLEVDGAPWKILEFLHVKPGKGAAFVRTKMRNYITGNTVEKTFRA 354
           TR+YALSSNDI+VG NLEVDGAPWK++EFLHVKPGKGAAFVRTKMRNYITGNTV+KTFRA
Sbjct: 42  TRVYALSSNDIRVGSNLEVDGAPWKVIEFLHVKPGKGAAFVRTKMRNYITGNTVDKTFRA 101

Query: 355 GSTIQEASISKETKQFTYKDGSQFVFMDLTSFEESRLNESDVGDRQKWLKEGMDCTLLYW 534
           GSTI EASISKETKQFTYKDG+QFVFMDLT+FEESRLNESDVGDRQKWLKEGMDC LLYW
Sbjct: 102 GSTIPEASISKETKQFTYKDGAQFVFMDLTTFEESRLNESDVGDRQKWLKEGMDCNLLYW 161

Query: 535 NGRIIDFDLPITVRLTVTETDPGQGDSAQGGTKPATLETGAVVNVPSFVDVGDDVLIDSR 714
           NGRIIDFDLPITVRLTVT+TDPGQGDSAQGGTKPAT+ETGAVV VPSFV+VGDD+LIDSR
Sbjct: 162 NGRIIDFDLPITVRLTVTDTDPGQGDSAQGGTKPATVETGAVVTVPSFVNVGDDILIDSR 221

Query: 715 TGQYMSRA 738
           TGQYM+RA
Sbjct: 222 TGQYMNRA 229



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>AK073074:Os03g0806400 |
          Length = 97

 Score = 44.7 bits (104), Expect = 9e-05
 Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
 Frame = +1

Query: 367 QEASISKETKQFTY--KDGSQFVFMDLTSFEESRLNESDVGDRQKWLKEGMDCTLLYWNG 540
           + + +  E K FTY  ++G     M+  +FE+  +++   G    +LK+ M  TL Y++G
Sbjct: 8   KHSGVFVEEKSFTYLYQEGDNVTLMEPETFEQLEVSKELFGKTAAYLKDEMKVTLQYFDG 67

Query: 541 RIIDFDLPITVRLTVTETDP-GQGDSAQ 621
           R +   +P  V  TV E  P  +G +AQ
Sbjct: 68  RPMSASVPPRVTCTVVEAQPHSKGITAQ 95



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>AK120804:Os06g0597600 |
          Length = 431

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
 Frame = -2

Query: 383 EIEASWIVLPARKVFSTVLPVI*LRIFVLTKAAPFPGLTWRNSRIF----HGAPSTSR-L 219
           E E  W    AR +  T  P +     V+  A P PGL+W   R+        P+T   L
Sbjct: 273 EAERVWCPELARLIGETAEPFV----NVIYDAEPLPGLSWAGGRVALVGDAAHPTTPHGL 328

Query: 218 NPTLMSLLDS 189
             T MS+LD+
Sbjct: 329 RSTNMSILDA 338



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>Os04g0630600:Os04g0630600 |
          Length = 399

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -1

Query: 897 DRISRPGVEGPSMINEKKKKRQCCGLFNGNYTKNA 793
           D +SR   E PS ++  K    CC L++ +  KN+
Sbjct: 31  DMLSRRRSETPSSVSPLKDSTNCCDLYSDDMAKNS 65



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>Os12g0429600:Os12g0429600 |
          Length = 1597

 Score = 28.5 bits (62), Expect = 7.0
 Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 9/45 (20%)
 Frame = -2

Query: 707 SIRTSSPTSTKDGTL---------TTAPVSRVAGFVPPCALSPCP 600
           S  +SS TST DG L         TTAP S     VPP A S  P
Sbjct: 75  STTSSSATSTSDGALRIPASTAPATTAPASTAPSSVPPGAPSIPP 119



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>AK070363:Os01g0107900 |
          Length = 627

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 27/125 (21%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
 Frame = +1

Query: 253 LEFLHVKPGKGAAFVRTKMRNYITGNTVEKTFRAG--STIQEASISKETKQFTYKDGSQF 426
           ++ +H++P KG     T   + ++  T E   +    S+++ ++IS+        D +  
Sbjct: 205 MKVVHMRPTKG-----TSSASSVSSATAESPAKEENESSLESSAISEGITDEANTDTT-- 257

Query: 427 VFMDLTSFEESRLNESDVGDRQKWLKEGMDCTLLYWNGRIIDFDLPITVRLTVTETDPGQ 606
               L   E+    E DVG+ +    EG+   L ++  RI +F + + + + V+E     
Sbjct: 258 ----LKGDEDVEDKEQDVGNAKDSSVEGLKSVLNFFKSRIPEFKVQV-INVDVSEEAELA 312

Query: 607 GDSAQ 621
            DS++
Sbjct: 313 SDSSE 317


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 24,686,892
Number of extensions: 558809
Number of successful extensions: 1698
Number of sequences better than 10.0: 7
Number of HSP's gapped: 1697
Number of HSP's successfully gapped: 7
Length of query: 309
Length of database: 15,399,855
Length adjustment: 100
Effective length of query: 209
Effective length of database: 11,395,755
Effective search space: 2381712795
Effective search space used: 2381712795
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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