Clone Name | FLbaf98l21 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AK111536:Os11g0607200 | 45 | 8e-05 | 2 | AK066417:Os06g0274500 | 32 | 0.70 | 3 | AB110204:Os02g0709900 | 32 | 0.92 | 4 | AK120418:Os03g0857000 | 31 | 1.2 | 5 | AK109851:Os06g0476900 | 31 | 1.2 | 6 | Os08g0128400:Os08g0128400 | 31 | 1.6 | 7 | Os06g0274300:Os06g0274300 | 31 | 1.6 | 8 | AK070234:Os02g0711100 | 30 | 3.5 | 9 | AK119937: | 29 | 4.6 | 10 | AK105486:Os02g0299200 | 29 | 4.6 | 11 | AK099001:Os03g0750700 | 29 | 4.6 | 12 | Os03g0636700:Os03g0636700 | 29 | 5.9 | 13 | Os03g0406900:Os03g0406900 | 29 | 5.9 | 14 | AK107719:Os09g0478900 | 28 | 7.8 | 15 | AK107713:Os09g0279800 | 28 | 7.8 | 16 | AK107536:Os05g0383200 | 28 | 7.8 | 17 | AK101534:Os03g0761200 | 28 | 7.8 | 18 | AK064205:Os03g0761200 | 28 | 7.8 |
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>AK111536:Os11g0607200 | Length = 608 Score = 45.1 bits (105), Expect = 8e-05 Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 1/54 (1%) Frame = +1 Query: 337 MKLV-HGLIFLGFLQSVACQMVDQQVQALSEVKMMLNDSRGVLEEWKDHLDTAC 495 MKL+ GL+ LG++Q A D +V AL E++ MLNDSRGVL W ++ + C Sbjct: 1 MKLIAFGLLLLGYIQYFATP--DSEVIALYEIRTMLNDSRGVLNGWNNNQVSPC 52
>AK066417:Os06g0274500 | Length = 640 Score = 32.0 bits (71), Expect = 0.70 Identities = 21/60 (35%), Positives = 31/60 (51%) Frame = +1 Query: 397 VDQQVQALSEVKMMLNDSRGVLEEWKDHLDTACSAIATVLCAGGQVVQM*VKPSPIISVL 576 V+ +VQAL +K +L D GVL+ W + CS A + C+ +V PS +S L Sbjct: 29 VNNEVQALIVIKNLLKDPHGVLKSWDQNSVDPCS-WAMITCSPDFLVTGLEAPSQHLSGL 87
>AB110204:Os02g0709900 | Length = 1155 Score = 31.6 bits (70), Expect = 0.92 Identities = 13/31 (41%), Positives = 23/31 (74%) Frame = +1 Query: 412 QALSEVKMMLNDSRGVLEEWKDHLDTACSAI 504 + LS+ + +LN+S+ LEEW++ LDT +A+ Sbjct: 377 EKLSKKEQVLNESKKKLEEWQNDLDTKSNAL 407
>AK120418:Os03g0857000 | Length = 76 Score = 31.2 bits (69), Expect = 1.2 Identities = 15/36 (41%), Positives = 23/36 (63%) Frame = +2 Query: 80 GSPARVQQQRQRGANRRLRAPHRGRHQQVTRAGREK 187 GSPA+ ++ R+RG R R RG+ + V RA R++ Sbjct: 32 GSPAKRERDRERGQGRWSRLWRRGQGRWVRRAARKR 67
>AK109851:Os06g0476900 | Length = 104 Score = 31.2 bits (69), Expect = 1.2 Identities = 16/36 (44%), Positives = 19/36 (52%) Frame = -3 Query: 243 VACASPVVSPPRATGSAPLFSRPARVTC*CLPRCGA 136 +A A P SPP AT S P RPA + C P G+ Sbjct: 66 LAAAPPRDSPPHATASCPSAPRPALTSLLCSPSQGS 101
>Os08g0128400:Os08g0128400 | Length = 176 Score = 30.8 bits (68), Expect = 1.6 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Frame = +2 Query: 74 PLGSPARVQQQRQRGANRRLRAPHRGRHQQVTRAGREKSGALPVA-RGGE 220 PLGS ++ +R+RG+ RR H G R GR P A R GE Sbjct: 18 PLGSRLLLRHRRRRGSRRRRPVNHPGGWGWAARGGRSSGQGRPGAIRDGE 67
>Os06g0274300:Os06g0274300 | Length = 263 Score = 30.8 bits (68), Expect = 1.6 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 9/59 (15%) Frame = +1 Query: 409 VQALSEVKMMLNDSRGVLEEWKDHLDTACS---------AIATVLCAGGQVVQM*VKPS 558 V+AL E+K +L D GVL+ W + CS ++ T L A GQ + + PS Sbjct: 44 VRALIEIKNLLEDPHGVLKSWDQNSVDPCSWALITCSPDSLVTTLEAPGQHLSGLLAPS 102
>AK070234:Os02g0711100 | Length = 489 Score = 29.6 bits (65), Expect = 3.5 Identities = 25/84 (29%), Positives = 37/84 (44%) Frame = -3 Query: 435 HLHLRQSLDLLIDHLTCNRL*EPQKN*SMY*LHGF*KLISALS*LKNEGLPLIIILTLFA 256 H H S +L++D L NRL EP + +S ++ +GL + L FA Sbjct: 102 HQHSPYSWNLVVDLLGKNRLFEP--------------MWDTVSSMRTQGL---LSLATFA 144 Query: 255 CVDDVACASPVVSPPRATGSAPLF 184 V A+P SP RA P++ Sbjct: 145 SVFSSLAANPASSPLRAFVELPMY 168
>AK119937: | Length = 236 Score = 29.3 bits (64), Expect = 4.6 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Frame = +2 Query: 80 GSPARVQQQRQRGANRRLRAPHRGRHQQVTRAGREKSGALPVARGGETT-GEAHATSSTQ 256 GS AR +R+RG R A GR + R R RGG TT G A ++ + Sbjct: 61 GSRARGGGRRRRGRGSRAHARGGGRGGRAGRRARGSGRGAGSRRGGGTTSGGRRAGATVE 120 Query: 257 ANRVK 271 A V+ Sbjct: 121 ARAVR 125
>AK105486:Os02g0299200 | Length = 485 Score = 29.3 bits (64), Expect = 4.6 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = +2 Query: 77 LGSPARVQQQRQRGANRRLRAPHR 148 +G AR QQQRQRG + R R+P R Sbjct: 260 VGEHARQQQQRQRGNDVRSRSPFR 283
>AK099001:Os03g0750700 | Length = 464 Score = 29.3 bits (64), Expect = 4.6 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Frame = +2 Query: 77 LGSPARVQQQRQRGANRRLRAPHRGRHQQVTRAG----REKSGALPVARGGETTG 229 L SP R+ Q + RRL HRG + G R+K+G+ GGE+ G Sbjct: 3 LASPYRIHQIFRFTTPRRLALAHRGDTYKARDEGQCHWRDKAGSATRREGGESEG 57
>Os03g0636700:Os03g0636700 | Length = 447 Score = 28.9 bits (63), Expect = 5.9 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 5/49 (10%) Frame = +2 Query: 134 RAPH--RGRHQQVTRAGREKSGALPVARG---GETTGEAHATSSTQANR 265 R+PH R RHQQ + E + V G G +GEAH T T + R Sbjct: 196 RSPHHPRFRHQQQQQEAEENVKIVEVDTGFGGGGGSGEAHCTPRTSSRR 244
>Os03g0406900:Os03g0406900 | Length = 449 Score = 28.9 bits (63), Expect = 5.9 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = -3 Query: 924 QFECQTWALRCLTK 883 +F+CQTWAL CL K Sbjct: 192 EFKCQTWALYCLVK 205
>AK107719:Os09g0478900 | Length = 130 Score = 28.5 bits (62), Expect = 7.8 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 9/60 (15%) Frame = -1 Query: 239 RAPPPSFRRLAPQAAPHSSLVP--LESPADVCLDVVLAI-------AGSRPVGAAVGLSP 87 RAPPP RR P + P S P + P+ ++VV + A SR A G+SP Sbjct: 9 RAPPPRHRRGRPPSPPPPSSAPSSIAGPSRSAVEVVASSCHRAPPQAASRSSLRAAGVSP 68
>AK107713:Os09g0279800 | Length = 131 Score = 28.5 bits (62), Expect = 7.8 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +2 Query: 110 QRGANRRLRAPHRGRHQQVTRAGREKSGALPVAR 211 +RGA R P RH++V G E +GA P+ R Sbjct: 50 ERGARGRSAPPLGPRHRRVVGGGGEDAGAAPLDR 83
>AK107536:Os05g0383200 | Length = 197 Score = 28.5 bits (62), Expect = 7.8 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = +1 Query: 40 GTPLHRATRDKSPRFAGESPTAAPTGREPAIASTTSRQTSAGDSSGTR 183 G P R + AG T APT R ++ +SR T++ ++ TR Sbjct: 133 GLPRRRGAACAPTKSAGWRRTRAPTARRTRASAPSSRTTTSSPTTATR 180
>AK101534:Os03g0761200 | Length = 335 Score = 28.5 bits (62), Expect = 7.8 Identities = 15/43 (34%), Positives = 26/43 (60%) Frame = +1 Query: 415 ALSEVKMMLNDSRGVLEEWKDHLDTACSAIATVLCAGGQVVQM 543 + SE ++M DS+ V+ EW+ L A A +C+GG+V+ + Sbjct: 130 SFSEERVMDADSKAVMMEWERPL---MEAHARAVCSGGKVLNV 169
>AK064205:Os03g0761200 | Length = 335 Score = 28.5 bits (62), Expect = 7.8 Identities = 15/43 (34%), Positives = 26/43 (60%) Frame = +1 Query: 415 ALSEVKMMLNDSRGVLEEWKDHLDTACSAIATVLCAGGQVVQM 543 + SE ++M DS+ V+ EW+ L A A +C+GG+V+ + Sbjct: 130 SFSEERVMDADSKAVMMEWERPL---MEAHARAVCSGGKVLNV 169 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 26,800,278 Number of extensions: 583341 Number of successful extensions: 2149 Number of sequences better than 10.0: 18 Number of HSP's gapped: 2141 Number of HSP's successfully gapped: 18 Length of query: 333 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 232 Effective length of database: 11,355,714 Effective search space: 2634525648 Effective search space used: 2634525648 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)