ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf98l21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK111536:Os11g0607200 45 8e-05
2AK066417:Os06g0274500 32 0.70
3AB110204:Os02g0709900 32 0.92
4AK120418:Os03g0857000 31 1.2
5AK109851:Os06g0476900 31 1.2
6Os08g0128400:Os08g0128400 31 1.6
7Os06g0274300:Os06g0274300 31 1.6
8AK070234:Os02g0711100 30 3.5
9AK119937: 29 4.6
10AK105486:Os02g0299200 29 4.6
11AK099001:Os03g0750700 29 4.6
12Os03g0636700:Os03g0636700 29 5.9
13Os03g0406900:Os03g0406900 29 5.9
14AK107719:Os09g0478900 28 7.8
15AK107713:Os09g0279800 28 7.8
16AK107536:Os05g0383200 28 7.8
17AK101534:Os03g0761200 28 7.8
18AK064205:Os03g0761200 28 7.8

>AK111536:Os11g0607200 |
          Length = 608
 Score = 45.1 bits (105), Expect = 8e-05
 Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
 Frame = +1

Query: 337 MKLV-HGLIFLGFLQSVACQMVDQQVQALSEVKMMLNDSRGVLEEWKDHLDTAC 495
           MKL+  GL+ LG++Q  A    D +V AL E++ MLNDSRGVL  W ++  + C
Sbjct: 1   MKLIAFGLLLLGYIQYFATP--DSEVIALYEIRTMLNDSRGVLNGWNNNQVSPC 52



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>AK066417:Os06g0274500 |
          Length = 640

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 21/60 (35%), Positives = 31/60 (51%)
 Frame = +1

Query: 397 VDQQVQALSEVKMMLNDSRGVLEEWKDHLDTACSAIATVLCAGGQVVQM*VKPSPIISVL 576
           V+ +VQAL  +K +L D  GVL+ W  +    CS  A + C+   +V     PS  +S L
Sbjct: 29  VNNEVQALIVIKNLLKDPHGVLKSWDQNSVDPCS-WAMITCSPDFLVTGLEAPSQHLSGL 87



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>AB110204:Os02g0709900 |
          Length = 1155

 Score = 31.6 bits (70), Expect = 0.92
 Identities = 13/31 (41%), Positives = 23/31 (74%)
 Frame = +1

Query: 412 QALSEVKMMLNDSRGVLEEWKDHLDTACSAI 504
           + LS+ + +LN+S+  LEEW++ LDT  +A+
Sbjct: 377 EKLSKKEQVLNESKKKLEEWQNDLDTKSNAL 407



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>AK120418:Os03g0857000 |
          Length = 76

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +2

Query: 80  GSPARVQQQRQRGANRRLRAPHRGRHQQVTRAGREK 187
           GSPA+ ++ R+RG  R  R   RG+ + V RA R++
Sbjct: 32  GSPAKRERDRERGQGRWSRLWRRGQGRWVRRAARKR 67



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>AK109851:Os06g0476900 |
          Length = 104

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = -3

Query: 243 VACASPVVSPPRATGSAPLFSRPARVTC*CLPRCGA 136
           +A A P  SPP AT S P   RPA  +  C P  G+
Sbjct: 66  LAAAPPRDSPPHATASCPSAPRPALTSLLCSPSQGS 101



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>Os08g0128400:Os08g0128400 |
          Length = 176

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +2

Query: 74  PLGSPARVQQQRQRGANRRLRAPHRGRHQQVTRAGREKSGALPVA-RGGE 220
           PLGS   ++ +R+RG+ RR    H G      R GR      P A R GE
Sbjct: 18  PLGSRLLLRHRRRRGSRRRRPVNHPGGWGWAARGGRSSGQGRPGAIRDGE 67



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>Os06g0274300:Os06g0274300 |
          Length = 263

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
 Frame = +1

Query: 409 VQALSEVKMMLNDSRGVLEEWKDHLDTACS---------AIATVLCAGGQVVQM*VKPS 558
           V+AL E+K +L D  GVL+ W  +    CS         ++ T L A GQ +   + PS
Sbjct: 44  VRALIEIKNLLEDPHGVLKSWDQNSVDPCSWALITCSPDSLVTTLEAPGQHLSGLLAPS 102



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>AK070234:Os02g0711100 |
          Length = 489

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 25/84 (29%), Positives = 37/84 (44%)
 Frame = -3

Query: 435 HLHLRQSLDLLIDHLTCNRL*EPQKN*SMY*LHGF*KLISALS*LKNEGLPLIIILTLFA 256
           H H   S +L++D L  NRL EP              +   +S ++ +GL   + L  FA
Sbjct: 102 HQHSPYSWNLVVDLLGKNRLFEP--------------MWDTVSSMRTQGL---LSLATFA 144

Query: 255 CVDDVACASPVVSPPRATGSAPLF 184
            V     A+P  SP RA    P++
Sbjct: 145 SVFSSLAANPASSPLRAFVELPMY 168



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>AK119937: |
          Length = 236

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +2

Query: 80  GSPARVQQQRQRGANRRLRAPHRGRHQQVTRAGREKSGALPVARGGETT-GEAHATSSTQ 256
           GS AR   +R+RG   R  A   GR  +  R  R         RGG TT G   A ++ +
Sbjct: 61  GSRARGGGRRRRGRGSRAHARGGGRGGRAGRRARGSGRGAGSRRGGGTTSGGRRAGATVE 120

Query: 257 ANRVK 271
           A  V+
Sbjct: 121 ARAVR 125



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>AK105486:Os02g0299200 |
          Length = 485

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +2

Query: 77  LGSPARVQQQRQRGANRRLRAPHR 148
           +G  AR QQQRQRG + R R+P R
Sbjct: 260 VGEHARQQQQRQRGNDVRSRSPFR 283



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>AK099001:Os03g0750700 |
          Length = 464

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
 Frame = +2

Query: 77  LGSPARVQQQRQRGANRRLRAPHRGRHQQVTRAG----REKSGALPVARGGETTG 229
           L SP R+ Q  +    RRL   HRG   +    G    R+K+G+     GGE+ G
Sbjct: 3   LASPYRIHQIFRFTTPRRLALAHRGDTYKARDEGQCHWRDKAGSATRREGGESEG 57



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>Os03g0636700:Os03g0636700 |
          Length = 447

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
 Frame = +2

Query: 134 RAPH--RGRHQQVTRAGREKSGALPVARG---GETTGEAHATSSTQANR 265
           R+PH  R RHQQ  +   E    + V  G   G  +GEAH T  T + R
Sbjct: 196 RSPHHPRFRHQQQQQEAEENVKIVEVDTGFGGGGGSGEAHCTPRTSSRR 244



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>Os03g0406900:Os03g0406900 |
          Length = 449

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -3

Query: 924 QFECQTWALRCLTK 883
           +F+CQTWAL CL K
Sbjct: 192 EFKCQTWALYCLVK 205



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>AK107719:Os09g0478900 |
          Length = 130

 Score = 28.5 bits (62), Expect = 7.8
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 9/60 (15%)
 Frame = -1

Query: 239 RAPPPSFRRLAPQAAPHSSLVP--LESPADVCLDVVLAI-------AGSRPVGAAVGLSP 87
           RAPPP  RR  P + P  S  P  +  P+   ++VV +        A SR    A G+SP
Sbjct: 9   RAPPPRHRRGRPPSPPPPSSAPSSIAGPSRSAVEVVASSCHRAPPQAASRSSLRAAGVSP 68



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>AK107713:Os09g0279800 |
          Length = 131

 Score = 28.5 bits (62), Expect = 7.8
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 110 QRGANRRLRAPHRGRHQQVTRAGREKSGALPVAR 211
           +RGA  R   P   RH++V   G E +GA P+ R
Sbjct: 50  ERGARGRSAPPLGPRHRRVVGGGGEDAGAAPLDR 83



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>AK107536:Os05g0383200 |
          Length = 197

 Score = 28.5 bits (62), Expect = 7.8
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +1

Query: 40  GTPLHRATRDKSPRFAGESPTAAPTGREPAIASTTSRQTSAGDSSGTR 183
           G P  R       + AG   T APT R    ++ +SR T++  ++ TR
Sbjct: 133 GLPRRRGAACAPTKSAGWRRTRAPTARRTRASAPSSRTTTSSPTTATR 180



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>AK101534:Os03g0761200 |
          Length = 335

 Score = 28.5 bits (62), Expect = 7.8
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = +1

Query: 415 ALSEVKMMLNDSRGVLEEWKDHLDTACSAIATVLCAGGQVVQM 543
           + SE ++M  DS+ V+ EW+  L     A A  +C+GG+V+ +
Sbjct: 130 SFSEERVMDADSKAVMMEWERPL---MEAHARAVCSGGKVLNV 169



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>AK064205:Os03g0761200 |
          Length = 335

 Score = 28.5 bits (62), Expect = 7.8
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = +1

Query: 415 ALSEVKMMLNDSRGVLEEWKDHLDTACSAIATVLCAGGQVVQM 543
           + SE ++M  DS+ V+ EW+  L     A A  +C+GG+V+ +
Sbjct: 130 SFSEERVMDADSKAVMMEWERPL---MEAHARAVCSGGKVLNV 169


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 26,800,278
Number of extensions: 583341
Number of successful extensions: 2149
Number of sequences better than 10.0: 18
Number of HSP's gapped: 2141
Number of HSP's successfully gapped: 18
Length of query: 333
Length of database: 15,399,855
Length adjustment: 101
Effective length of query: 232
Effective length of database: 11,355,714
Effective search space: 2634525648
Effective search space used: 2634525648
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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