Clone Name | FLbaf96h12 |
---|---|
Clone Library Name | barley_pub |
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16 map S2606, complete sequence Length = 124140 Score = 186 bits (94), Expect = 1e-43 Identities = 130/142 (91%) Strand = Plus / Minus Query: 535 acgacgaggtcgaggagaagcggccgcggcggcgcaccaacgacgggctcaccatatact 594 ||||||| ||||||||||||||||||||||||||||| |||||||| | ||||||| Sbjct: 116794 acgacgaagtcgaggagaagcggccgcggcggcgcacggcggacgggctggcgatatact 116735 Query: 595 ccgccgacgagcttgggttcggcaaggccgacgccggcggcaccgccctctgccccttcg 654 ||||||||||||| |||||||||||| ||||||||||||||||| | ||||||||||||| Sbjct: 116734 ccgccgacgagctcgggttcggcaagtccgacgccggcggcaccccgctctgccccttcg 116675 Query: 655 actgcgactgctgcttctgagc 676 |||||||||||||||||||||| Sbjct: 116674 actgcgactgctgcttctgagc 116653 Score = 73.8 bits (37), Expect = 1e-09 Identities = 69/79 (87%), Gaps = 3/79 (3%) Strand = Plus / Minus Query: 335 gaagccgaagaagcagaaggagagcaacgagatcgacgagatcttcgaggccactaag-- 392 ||||||||||||| |||||| || ||||||||||||| |||||||| ||||||| ||| Sbjct: 116994 gaagccgaagaagaagaaggcgaccaacgagatcgacaagatcttccaggccaccaagtc 116935 Query: 393 -tccgacaagaagcgcaag 410 |||| ||||||||||||| Sbjct: 116934 atccggcaagaagcgcaag 116916
>gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C08 map R2847, complete sequence Length = 100918 Score = 186 bits (94), Expect = 1e-43 Identities = 130/142 (91%) Strand = Plus / Minus Query: 535 acgacgaggtcgaggagaagcggccgcggcggcgcaccaacgacgggctcaccatatact 594 ||||||| ||||||||||||||||||||||||||||| |||||||| | ||||||| Sbjct: 4826 acgacgaagtcgaggagaagcggccgcggcggcgcacggcggacgggctggcgatatact 4767 Query: 595 ccgccgacgagcttgggttcggcaaggccgacgccggcggcaccgccctctgccccttcg 654 ||||||||||||| |||||||||||| ||||||||||||||||| | ||||||||||||| Sbjct: 4766 ccgccgacgagctcgggttcggcaagtccgacgccggcggcaccccgctctgccccttcg 4707 Query: 655 actgcgactgctgcttctgagc 676 |||||||||||||||||||||| Sbjct: 4706 actgcgactgctgcttctgagc 4685 Score = 73.8 bits (37), Expect = 1e-09 Identities = 69/79 (87%), Gaps = 3/79 (3%) Strand = Plus / Minus Query: 335 gaagccgaagaagcagaaggagagcaacgagatcgacgagatcttcgaggccactaag-- 392 ||||||||||||| |||||| || ||||||||||||| |||||||| ||||||| ||| Sbjct: 5026 gaagccgaagaagaagaaggcgaccaacgagatcgacaagatcttccaggccaccaagtc 4967 Query: 393 -tccgacaagaagcgcaag 410 |||| ||||||||||||| Sbjct: 4966 atccggcaagaagcgcaag 4948
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 186 bits (94), Expect = 1e-43 Identities = 130/142 (91%) Strand = Plus / Minus Query: 535 acgacgaggtcgaggagaagcggccgcggcggcgcaccaacgacgggctcaccatatact 594 ||||||| ||||||||||||||||||||||||||||| |||||||| | ||||||| Sbjct: 27963988 acgacgaagtcgaggagaagcggccgcggcggcgcacggcggacgggctggcgatatact 27963929 Query: 595 ccgccgacgagcttgggttcggcaaggccgacgccggcggcaccgccctctgccccttcg 654 ||||||||||||| |||||||||||| ||||||||||||||||| | ||||||||||||| Sbjct: 27963928 ccgccgacgagctcgggttcggcaagtccgacgccggcggcaccccgctctgccccttcg 27963869 Query: 655 actgcgactgctgcttctgagc 676 |||||||||||||||||||||| Sbjct: 27963868 actgcgactgctgcttctgagc 27963847 Score = 73.8 bits (37), Expect = 1e-09 Identities = 69/79 (87%), Gaps = 3/79 (3%) Strand = Plus / Minus Query: 335 gaagccgaagaagcagaaggagagcaacgagatcgacgagatcttcgaggccactaag-- 392 ||||||||||||| |||||| || ||||||||||||| |||||||| ||||||| ||| Sbjct: 27964188 gaagccgaagaagaagaaggcgaccaacgagatcgacaagatcttccaggccaccaagtc 27964129 Query: 393 -tccgacaagaagcgcaag 410 |||| ||||||||||||| Sbjct: 27964128 atccggcaagaagcgcaag 27964110 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 220 cggcggcggcggcggccaagaag 242 ||||||||||||||||||||||| Sbjct: 24942225 cggcggcggcggcggccaagaag 24942247 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 220 cggcggcggcggcggccaagaa 241 |||||||||||||||||||||| Sbjct: 15968784 cggcggcggcggcggccaagaa 15968805 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 ggcggcggcggcggccaagaa 241 ||||||||||||||||||||| Sbjct: 1491838 ggcggcggcggcggccaagaa 1491858 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 530 cggccacgacgaggtcgaggagaag 554 |||||||||||||| |||||||||| Sbjct: 12725717 cggccacgacgaggacgaggagaag 12725741
>gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete sequence Length = 127914 Score = 151 bits (76), Expect = 7e-33 Identities = 118/132 (89%) Strand = Plus / Minus Query: 544 tcgaggagaagcggccgcggcggcgcaccaacgacgggctcaccatatactccgccgacg 603 ||||||||||||||||||| |||||||| ||||||||| ||||||||| ||||| | Sbjct: 33989 tcgaggagaagcggccgcgtcggcgcactgcggacgggctcgtcatatactcggccgatg 33930 Query: 604 agcttgggttcggcaaggccgacgccggcggcaccgccctctgccccttcgactgcgact 663 |||| ||||||||||||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 33929 agctcgggttcggcaaggccgacgccggtggcaccccgctgtgccccttcgactgcgact 33870 Query: 664 gctgcttctgag 675 |||||||||||| Sbjct: 33869 gctgcttctgag 33858 Score = 67.9 bits (34), Expect = 9e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 335 gaagccgaagaagcagaaggagagcaacgagatcgacgagatcttc 380 |||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 34228 gaagccgaagaagcagaaggtgagggacgagatcgacgagatcttc 34183
>dbj|AK242529.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J080315G10, full insert sequence Length = 349 Score = 109 bits (55), Expect = 3e-20 Identities = 64/67 (95%) Strand = Plus / Plus Query: 610 ggttcggcaaggccgacgccggcggcaccgccctctgccccttcgactgcgactgctgct 669 ||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 1 ggttcggcaagtccgacgccggcggcaccccgctctgccccttcgactgcgactgctgct 60 Query: 670 tctgagc 676 ||||||| Sbjct: 61 tctgagc 67
>gb|AY108246.1| Zea mays PCO062242 mRNA sequence Length = 523 Score = 93.7 bits (47), Expect = 1e-15 Identities = 83/95 (87%) Strand = Plus / Plus Query: 544 tcgaggagaagcggccgcggcggcgcaccaacgacgggctcaccatatactccgccgacg 603 ||||||||||||||||||| |||||||| ||||| ||| |||||||||| | ||| | Sbjct: 418 tcgaggagaagcggccgcgtcggcgcactgcggacggactcgccatatactcgggcgatg 477 Query: 604 agcttgggttcggcaaggccgacgccggcggcacc 638 |||| ||||||||||||||||||||||| |||||| Sbjct: 478 agctcgggttcggcaaggccgacgccggtggcacc 512 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 335 gaagccgaagaagcagaaggagagcaacgagatcgacgagatcttc 380 |||||||||||||||||||| ||| |||||||||| ||||||||| Sbjct: 185 gaagccgaagaagcagaaggtgagggacgagatcgatgagatcttc 230
>emb|X14224.1|ZMMU4 Maize Mu4 transposable element DNA Length = 2233 Score = 89.7 bits (45), Expect = 2e-14 Identities = 112/133 (84%), Gaps = 1/133 (0%) Strand = Plus / Plus Query: 544 tcgaggagaagcggccgcggcggcgcaccaacgacgggctcaccatatactccgccgacg 603 ||||||||||||||||||| ||| ||| ||||| ||| |||||||||| ||||| | Sbjct: 630 tcgaggagaagcggccgcgtcggtgcagtgcggacggactcgccatatactcggccgatg 689 Query: 604 agcttgggttcggcaaggccgacgccggcggcaccgccctctgccccttcgactgcgact 663 |||| |||||| |||||||| |||| || |||||| | | ||||| ||||||||||||| Sbjct: 690 agctcgggttcagcaaggccaacgc-ggtggcaccccgatgtgcccgttcgactgcgact 748 Query: 664 gctgcttctgagc 676 ||||||||||||| Sbjct: 749 gctgcttctgagc 761
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 54.0 bits (27), Expect = 0.001 Identities = 30/31 (96%) Strand = Plus / Plus Query: 644 ctgccccttcgactgcgactgctgcttctga 674 |||||| |||||||||||||||||||||||| Sbjct: 967445 ctgcccgttcgactgcgactgctgcttctga 967475
>ref|XM_838249.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1166) partial mRNA Length = 600 Score = 54.0 bits (27), Expect = 0.001 Identities = 30/31 (96%) Strand = Plus / Plus Query: 644 ctgccccttcgactgcgactgctgcttctga 674 |||||| |||||||||||||||||||||||| Sbjct: 570 ctgcccgttcgactgcgactgctgcttctga 600
>ref|XM_001076622.1| PREDICTED: Rattus norvegicus similar to chromodomain helicase DNA binding protein 5 (LOC686986), mRNA Length = 5784 Score = 50.1 bits (25), Expect = 0.020 Identities = 31/33 (93%) Strand = Plus / Plus Query: 240 aagaagacgccgaagaagcagaaggagagcaag 272 ||||||| ||||||||||| ||||||||||||| Sbjct: 73 aagaagaagccgaagaagctgaaggagagcaag 105 Score = 46.1 bits (23), Expect = 0.31 Identities = 26/27 (96%) Strand = Plus / Plus Query: 335 gaagccgaagaagcagaaggagagcaa 361 |||||||||||||| |||||||||||| Sbjct: 78 gaagccgaagaagctgaaggagagcaa 104
>ref|XM_001078944.1| PREDICTED: Rattus norvegicus similar to chromodomain helicase DNA binding protein 5 (LOC691589), mRNA Length = 5856 Score = 50.1 bits (25), Expect = 0.020 Identities = 31/33 (93%) Strand = Plus / Plus Query: 240 aagaagacgccgaagaagcagaaggagagcaag 272 ||||||| ||||||||||| ||||||||||||| Sbjct: 145 aagaagaagccgaagaagctgaaggagagcaag 177 Score = 46.1 bits (23), Expect = 0.31 Identities = 26/27 (96%) Strand = Plus / Plus Query: 335 gaagccgaagaagcagaaggagagcaa 361 |||||||||||||| |||||||||||| Sbjct: 150 gaagccgaagaagctgaaggagagcaa 176
>gb|AC153857.7| Mus musculus 6 BAC RP23-158G17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 215780 Score = 48.1 bits (24), Expect = 0.079 Identities = 24/24 (100%) Strand = Plus / Minus Query: 410 gttgcaggaggaggaggaagagga 433 |||||||||||||||||||||||| Sbjct: 1563 gttgcaggaggaggaggaagagga 1540
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 48.1 bits (24), Expect = 0.079 Identities = 24/24 (100%) Strand = Plus / Minus Query: 209 gacgcgagagacggcggcggcggc 232 |||||||||||||||||||||||| Sbjct: 112045 gacgcgagagacggcggcggcggc 112022
>gb|AC153872.2| Mus musculus 6 BAC RP23-226O20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203418 Score = 48.1 bits (24), Expect = 0.079 Identities = 24/24 (100%) Strand = Plus / Minus Query: 410 gttgcaggaggaggaggaagagga 433 |||||||||||||||||||||||| Sbjct: 127097 gttgcaggaggaggaggaagagga 127074
>dbj|AP006058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0066B16 Length = 190143 Score = 48.1 bits (24), Expect = 0.079 Identities = 24/24 (100%) Strand = Plus / Minus Query: 209 gacgcgagagacggcggcggcggc 232 |||||||||||||||||||||||| Sbjct: 7543 gacgcgagagacggcggcggcggc 7520
>dbj|AP006059.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0023E08 Length = 127560 Score = 48.1 bits (24), Expect = 0.079 Identities = 24/24 (100%) Strand = Plus / Minus Query: 209 gacgcgagagacggcggcggcggc 232 |||||||||||||||||||||||| Sbjct: 112045 gacgcgagagacggcggcggcggc 112022
>ref|XM_957161.1| Neurospora crassa OR74A hypothetical protein (NCU06547.1) partial mRNA Length = 1875 Score = 48.1 bits (24), Expect = 0.079 Identities = 24/24 (100%) Strand = Plus / Minus Query: 415 aggaggaggaggaagaggagtccg 438 |||||||||||||||||||||||| Sbjct: 847 aggaggaggaggaagaggagtccg 824
>emb|AL691435.14| Mouse DNA sequence from clone RP23-246E11 on chromosome 2, complete sequence Length = 160989 Score = 48.1 bits (24), Expect = 0.079 Identities = 27/28 (96%) Strand = Plus / Plus Query: 407 caagttgcaggaggaggaggaagaggag 434 ||||||| |||||||||||||||||||| Sbjct: 125546 caagttgaaggaggaggaggaagaggag 125573
>gb|AC110219.12| Mus musculus chromosome 1, clone RP24-541P18, complete sequence Length = 174133 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 412 tgcaggaggaggaggaagaggag 434 ||||||||||||||||||||||| Sbjct: 139356 tgcaggaggaggaggaagaggag 139378
>gb|DQ512340.1| Triticum aestivum MADS-box transcription factor TaAGL23 (AGL23) mRNA, complete cds Length = 1003 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 220 cggcggcggcggcggccaagaag 242 ||||||||||||||||||||||| Sbjct: 158 cggcggcggcggcggccaagaag 180
>gb|DQ512335.1| Triticum aestivum MADS-box transcription factor TaAGL18 (AGL18) mRNA, complete cds Length = 970 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 220 cggcggcggcggcggccaagaag 242 ||||||||||||||||||||||| Sbjct: 103 cggcggcggcggcggccaagaag 125
>gb|AY831392.1| Oryza sativa (indica cultivar-group) BTH-induced ERF transcriptional factor 1 (BIERF1) mRNA, complete cds Length = 1613 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 220 cggcggcggcggcggccaagaag 242 ||||||||||||||||||||||| Sbjct: 81 cggcggcggcggcggccaagaag 103
>gb|AC145811.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0088L13 map near C50029S, complete sequence Length = 129900 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 220 cggcggcggcggcggccaagaag 242 ||||||||||||||||||||||| Sbjct: 86137 cggcggcggcggcggccaagaag 86159
>gb|AC102016.4| Mus musculus chromosome 5, clone RP24-567O8, complete sequence Length = 154115 Score = 46.1 bits (23), Expect = 0.31 Identities = 26/27 (96%) Strand = Plus / Plus Query: 408 aagttgcaggaggaggaggaagaggag 434 |||||| |||||||||||||||||||| Sbjct: 52775 aagttggaggaggaggaggaagaggag 52801
>emb|AL117263.1|LMFL7836 Leishmania major Friedlin chromosome 23 cosmid L7836, complete sequence Length = 36235 Score = 46.1 bits (23), Expect = 0.31 Identities = 26/27 (96%) Strand = Plus / Plus Query: 220 cggcggcggcggcggccaagaagaaga 246 ||||||| ||||||||||||||||||| Sbjct: 29998 cggcggctgcggcggccaagaagaaga 30024
>emb|AJ867400.1| Sorghum bicolor mRNA for glycosyltransferase (a3 gene) Length = 2019 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 416 ggaggaggaggaagaggagtccg 438 ||||||||||||||||||||||| Sbjct: 534 ggaggaggaggaagaggagtccg 556
>emb|AL773508.6| Mouse DNA sequence from clone RP23-253D15 on chromosome 2, complete sequence Length = 132091 Score = 46.1 bits (23), Expect = 0.31 Identities = 26/27 (96%) Strand = Plus / Minus Query: 408 aagttgcaggaggaggaggaagaggag 434 |||||| |||||||||||||||||||| Sbjct: 71332 aagttggaggaggaggaggaagaggag 71306
>gb|AY105702.1| Zea mays PCO125609 mRNA sequence Length = 1889 Score = 46.1 bits (23), Expect = 0.31 Identities = 23/23 (100%) Strand = Plus / Plus Query: 220 cggcggcggcggcggccaagaag 242 ||||||||||||||||||||||| Sbjct: 261 cggcggcggcggcggccaagaag 283
>gb|EF013135.1| Mayriella ebbei abdominal-A (abd-A) gene, exon 1 and partial cds Length = 594 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 218 gacggcggcggcggcggccaag 239 |||||||||||||||||||||| Sbjct: 411 gacggcggcggcggcggccaag 390
>gb|AC190108.4| Canis Familiaris chromosome 9, clone XX-415N7, complete sequence Length = 187522 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 43915 gcaggaggaggaggaagaggag 43936
>gb|DQ245469.1| Zea mays clone 15843 mRNA sequence Length = 932 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 221 ggcggcggcggcggccaagaag 242 |||||||||||||||||||||| Sbjct: 279 ggcggcggcggcggccaagaag 300
>gb|DQ493648.1| Zea mays cultivar I137TN bz locus region Length = 120751 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 216 gagacggcggcggcggcggccaagaagaag 245 |||| ||||||||||||||||||| ||||| Sbjct: 83903 gagaaggcggcggcggcggccaaggagaag 83932
>emb|CT828248.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA011O18, full insert sequence Length = 626 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 214 gagagacggcggcggcggcggc 235 |||||||||||||||||||||| Sbjct: 99 gagagacggcggcggcggcggc 78
>gb|AC186977.7| Canis Familiaris chromosome 2, clone XX-262H22, complete sequence Length = 211239 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 210070 gcaggaggaggaggaagaggag 210091
>ref|NM_001072383.1| Oryza sativa (japonica cultivar-group) Os11g0169400 (Os11g0169400) mRNA, complete cds Length = 1396 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 626 cgccggcggcaccgccctctgc 647 |||||||||||||||||||||| Sbjct: 915 cgccggcggcaccgccctctgc 936
>gb|AC186346.2| Gallus gallus BAC clone CH261-175M10 from chromosome z, complete sequence Length = 192146 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 150115 gcaggaggaggaggaagaggag 150136
>ref|XM_509357.2| PREDICTED: Pan troglodytes trichoplein (TCHP), mRNA Length = 2281 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 1810 gcaggaggaggaggaagaggag 1831
>gb|AC147354.3| Xenopus tropicalis clone CH216-29N7, complete sequence Length = 179729 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 45272 gcaggaggaggaggaagaggag 45293
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 1627049 gcaggaggaggaggaagaggag 1627028 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1023 ttaggaagagattgttatggc 1043 ||||||||||||||||||||| Sbjct: 22175390 ttaggaagagattgttatggc 22175410
>gb|AC026911.16| Mus musculus chromosome 1, clone RP23-190F21, complete sequence Length = 239916 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 42533 gcaggaggaggaggaagaggag 42554
>emb|CT025541.14| Mouse DNA sequence from clone RP23-479F10 on chromosome 17, complete sequence Length = 190685 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 117068 gcaggaggaggaggaagaggag 117089
>gb|AC183588.3| Canis Familiaris chromosome 9, clone XX-11G10, complete sequence Length = 152987 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 47780 gcaggaggaggaggaagaggag 47801
>ref|XM_001076719.1| PREDICTED: Rattus norvegicus hypothetical protein LOC691063 (LOC691063), mRNA Length = 1788 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 1311 gcaggaggaggaggaagaggag 1332
>ref|XM_001076002.1| PREDICTED: Rattus norvegicus hypothetical protein LOC686849 (LOC686849), mRNA Length = 303 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 75 gcaggaggaggaggaagaggag 96
>ref|XM_975851.1| PREDICTED: Mus musculus hypothetical LOC625287 (LOC625287), mRNA Length = 273 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 162 gcaggaggaggaggaagaggag 183
>ref|XM_979221.1| PREDICTED: Mus musculus hypothetical protein LOC670114 (LOC670114), mRNA Length = 591 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 270 gcaggaggaggaggaagaggag 291
>emb|CT486009.11| Mouse DNA sequence from clone RP24-160E3 on chromosome 9, complete sequence Length = 193947 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 42678 gcaggaggaggaggaagaggag 42657
>gb|DQ353003.1| Mayriella transfuga voucher RA0265 abdominal-A (AbdA) gene, partial cds Length = 529 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 218 gacggcggcggcggcggccaag 239 |||||||||||||||||||||| Sbjct: 405 gacggcggcggcggcggccaag 384
>emb|CT030723.18| Mouse DNA sequence from clone RP23-33L24 on chromosome 16, complete sequence Length = 241451 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 218193 gcaggaggaggaggaagaggag 218172
>emb|CT009561.24| Mouse DNA sequence from clone RP23-128B6 on chromosome 16, complete sequence Length = 141692 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 99167 gcaggaggaggaggaagaggag 99146 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 99347 gcaggaggaggaggaagaggag 99326 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 99509 gcaggaggaggaggaagaggag 99488
>gb|AC107839.14| Mus musculus chromosome 7, clone RP23-284K1, complete sequence Length = 170751 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 162148 gcaggaggaggaggaagaggag 162127
>gb|AC154844.2| Mus musculus BAC clone RP23-46K13 from chromosome 16, complete sequence Length = 196946 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 95901 gcaggaggaggaggaagaggag 95922
>gb|AC163640.5| Mus musculus BAC clone RP24-182L3 from chromosome 16, complete sequence Length = 168350 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 15557 gcaggaggaggaggaagaggag 15578
>gb|AC124828.14| Mus musculus chromosome 5, clone RP24-126A19, complete sequence Length = 188504 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 50204 gcaggaggaggaggaagaggag 50183
>gb|AC162883.4| Mus musculus chromosome 1, clone RP24-148E21, complete sequence Length = 154199 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 76808 gcaggaggaggaggaagaggag 76787
>gb|AY016021.1| Mus musculus clone 03245 alpha globin gene cluster, complete sequence Length = 183192 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 415 aggaggaggaggaagaggagtc 436 |||||||||||||||||||||| Sbjct: 17358 aggaggaggaggaagaggagtc 17379
>gb|AC091787.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0087G11, complete sequence Length = 169728 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 220 cggcggcggcggcggccaagaa 241 |||||||||||||||||||||| Sbjct: 76167 cggcggcggcggcggccaagaa 76146
>gb|AC146913.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0013C12 map near S6115, complete sequence Length = 123718 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 211 cgcgagagacggcggcggcggcggcc 236 |||| ||||||||||||||||||||| Sbjct: 83304 cgcgggagacggcggcggcggcggcc 83329 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 216 gagacggcggcggcggcggcc 236 ||||||||||||||||||||| Sbjct: 61713 gagacggcggcggcggcggcc 61733
>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23 map near R10571S, complete sequence Length = 161073 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 626 cgccggcggcaccgccctctgc 647 |||||||||||||||||||||| Sbjct: 75067 cgccggcggcaccgccctctgc 75046
>gb|AC109205.12| Mus musculus chromosome 7, clone RP23-137A4, complete sequence Length = 225302 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 220406 gcaggaggaggaggaagaggag 220427
>gb|AC161872.7| Mus musculus BAC clone RP24-88E7 from chromosome 14, complete sequence Length = 226399 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 143572 gcaggaggaggaggaagaggag 143551
>gb|AC161873.5| Mus musculus BAC clone RP24-100P9 from chromosome 14, complete sequence Length = 240703 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 226454 gcaggaggaggaggaagaggag 226433
>gb|AC109272.20| Mus musculus chromosome 7, clone RP23-354L18, complete sequence Length = 202993 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 59923 gcaggaggaggaggaagaggag 59902
>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017K09, complete sequence Length = 155525 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 215 agagacggcggcggcggcggcc 236 |||||||||||||||||||||| Sbjct: 72542 agagacggcggcggcggcggcc 72563
>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11, complete sequence Length = 102567 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 101475 gcaggaggaggaggaagaggag 101496
>ref|XM_717608.1| Candida albicans SC5314 hypothetical protein (CaO19_4629), mRNA Length = 2898 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 491 gcaggaggaggaggaagaggag 470
>gb|AC087775.2| Rattus norvegicus strain Brown Norway clone RP31-464J4, complete sequence Length = 185081 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 183086 gcaggaggaggaggaagaggag 183107
>gb|AC087251.2| Rattus norvegicus strain Brown Norway clone RP31-186N2, complete sequence Length = 149358 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 23004 gcaggaggaggaggaagaggag 23025
>gb|AC105319.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1657_H11, complete sequence Length = 98103 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 6585 gcaggaggaggaggaagaggag 6606
>gb|AC127348.4| Mus musculus BAC clone RP23-57D10 from chromosome 7, complete sequence Length = 229190 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 79311 gcaggaggaggaggaagaggag 79332
>gb|AC166052.5| Mus musculus BAC clone RP24-95N16 from chromosome 9, complete sequence Length = 175760 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 61419 gcaggaggaggaggaagaggag 61440
>gb|AC118476.15| Mus musculus chromosome 9, clone RP23-242K3, complete sequence Length = 197683 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 56869 gcaggaggaggaggaagaggag 56890
>gb|AC164155.2| Mus musculus BAC clone RP24-548I6 from chromosome 14, complete sequence Length = 215419 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 208113 gcaggaggaggaggaagaggag 208092
>gb|AC135292.2| Mus musculus BAC clone RP23-153N21 from chromosome 15, complete sequence Length = 206967 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 169931 gcaggaggaggaggaagaggag 169910
>gb|AC126250.4| Mus musculus BAC clone RP23-452K12 from chromosome 14, complete sequence Length = 194924 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 114909 gcaggaggaggaggaagaggag 114888
>gb|AC132358.3| Mus musculus BAC clone RP24-133O24 from chromosome 18, complete sequence Length = 182085 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 144807 gcaggaggaggaggaagaggag 144786
>gb|AC124449.3| Mus musculus BAC clone RP24-212N10 from chromosome 15, complete sequence Length = 165858 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 163383 gcaggaggaggaggaagaggag 163362
>gb|AC131722.4| Mus musculus BAC clone RP23-143M5 from chromosome 9, complete sequence Length = 228144 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 207146 gcaggaggaggaggaagaggag 207125
>gb|AC122342.4| Mus musculus BAC clone RP23-357O17 from chromosome 8, complete sequence Length = 199412 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 171611 gcaggaggaggaggaagaggag 171590
>gb|AC128702.4| Mus musculus BAC clone RP24-239M3 from chromosome 9, complete sequence Length = 159431 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 1626 gcaggaggaggaggaagaggag 1647
>gb|AC124381.4| Mus musculus BAC clone RP24-406E24 from chromosome 15, complete sequence Length = 176561 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 138593 gcaggaggaggaggaagaggag 138614
>gb|AC121985.3| Mus musculus BAC clone RP24-293C3 from chromosome 8, complete sequence Length = 150444 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 87949 gcaggaggaggaggaagaggag 87928
>gb|AC127234.3| Mus musculus BAC clone RP24-566K14 from chromosome 18, complete sequence Length = 181515 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 91191 gcaggaggaggaggaagaggag 91212
>gb|AC122388.5| Mus musculus BAC clone RP24-80J12 from chromosome 16, complete sequence Length = 214268 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 103386 gcaggaggaggaggaagaggag 103365
>gb|AC122919.3| Mus musculus BAC clone RP23-30C12 from 10, complete sequence Length = 221920 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 177409 gcaggaggaggaggaagaggag 177430
>gb|AC122261.2| Mus musculus BAC clone RP23-187F24 from 15, complete sequence Length = 223801 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 178615 gcaggaggaggaggaagaggag 178594
>gb|AC122813.3| Mus musculus BAC clone RP23-230L15 from 14, complete sequence Length = 221468 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 32844 gcaggaggaggaggaagaggag 32823
>gb|AC124541.4| Mus musculus BAC clone RP23-257F7 from 7, complete sequence Length = 145556 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 18592 gcaggaggaggaggaagaggag 18613
>gb|AC084389.1| Mus musculus BAC clone RP23-247A1 from 1, complete sequence Length = 206497 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 76972 gcaggaggaggaggaagaggag 76951
>ref|NM_139378.2| Drosophila melanogaster CG13928-RA (CG13928), mRNA Length = 2587 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 1329 gcaggaggaggaggaagaggag 1350
>gb|AC091316.2| Sus scrofa clone RP44-479G12, complete sequence Length = 155724 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 16 tctccccgcgccgcgccgccaccccc 41 |||||||||||||||||||| ||||| Sbjct: 57617 tctccccgcgccgcgccgcccccccc 57642
>ref|XM_541235.2| PREDICTED: Canis familiaris similar to C34E11.3 (LOC484118), mRNA Length = 3449 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 220 cggcggcggcggcggccaagaa 241 |||||||||||||||||||||| Sbjct: 833 cggcggcggcggcggccaagaa 854
>gb|AC113126.10| Mus musculus chromosome 6, clone RP23-352D5, complete sequence Length = 176364 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 49355 gcaggaggaggaggaagaggag 49334
>gb|AC024068.16| Mus musculus strain 129S6/SvEvTac clone rp22-86n23 map 1, complete sequence Length = 157066 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 131132 gcaggaggaggaggaagaggag 131111
>ref|NM_032300.2| Homo sapiens trichoplein, keratin filament binding (TCHP), mRNA gb|AY007230.1| Homo sapiens tumor suppressor protein mRNA, complete cds Length = 3162 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 1574 gcaggaggaggaggaagaggag 1595
>dbj|AK092736.1| Homo sapiens cDNA FLJ35417 fis, clone SMINT2000747 Length = 2077 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 1512 gcaggaggaggaggaagaggag 1533
>gb|AC157990.4| Mus musculus chromosome 5, clone RP24-307I24, complete sequence Length = 153860 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 119944 gcaggaggaggaggaagaggag 119965
>gb|AC119088.4| Rattus norvegicus 4 BAC CH230-222H3 (Children's Hospital Oakland Research Institute) complete sequence Length = 224687 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 17179 gcaggaggaggaggaagaggag 17158
>gb|AC160391.2| Mus musculus BAC clone RP24-235G7 from chromosome 12, complete sequence Length = 186582 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 136835 gcaggaggaggaggaagaggag 136856
>gb|AC153523.7| Mus musculus 10 BAC RP23-463C2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 200141 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 415 aggaggaggaggaagaggagtc 436 |||||||||||||||||||||| Sbjct: 1239 aggaggaggaggaagaggagtc 1218
>ref|NM_029992.1| Mus musculus trichoplein, keratin filament binding (Tchp), mRNA gb|BC043048.1| Mus musculus trichoplein, keratin filament binding, mRNA (cDNA clone MGC:57948 IMAGE:5704036), complete cds Length = 3151 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 1803 gcaggaggaggaggaagaggag 1824
>gb|BC047930.1| Mus musculus trichoplein, keratin filament binding, mRNA (cDNA clone MGC:49425 IMAGE:5400265), complete cds Length = 2225 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 831 gcaggaggaggaggaagaggag 852
>ref|NM_001033377.1| Mus musculus RIKEN cDNA 9330158H04 gene (9330158H04Rik), mRNA dbj|AK139997.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230035J22 product:hypothetical protein, full insert sequence Length = 3176 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 1772 gcaggaggaggaggaagaggag 1751
>gb|AC158577.5| Mus musculus chromosome 1, clone RP24-187D4, complete sequence Length = 155742 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 116112 gcaggaggaggaggaagaggag 116133
>gb|AC154564.3| Mus musculus BAC clone RP23-402A16 from chromosome 16, complete sequence Length = 214128 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 162175 gcaggaggaggaggaagaggag 162196 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagagga 433 ||||||||||||||||||||| Sbjct: 14645 gcaggaggaggaggaagagga 14625
>gb|AC084876.19| Homo sapiens 12 BAC RP11-837J7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 114631 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 97092 gcaggaggaggaggaagaggag 97071
>dbj|AK155850.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730301D12 product:hypothetical Arginine-rich region profile containing protein, full insert sequence Length = 1475 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 480 gcaggaggaggaggaagaggag 501
>gb|BC004285.1| Homo sapiens trichoplein, keratin filament binding, mRNA (cDNA clone MGC:10854 IMAGE:3617849), complete cds Length = 2099 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 1493 gcaggaggaggaggaagaggag 1514
>gb|AC123776.5| Homo sapiens chromosome 8, clone RP11-213I2, complete sequence Length = 157633 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 99177 gcaggaggaggaggaagaggag 99156
>dbj|AK163429.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230029N03 product:unclassifiable, full insert sequence Length = 2191 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 7 gcaggaggaggaggaagaggag 28
>dbj|AK159947.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420039K06 product:similar to Tumor suppressor protein [Homo sapiens], full insert sequence Length = 2525 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 1499 gcaggaggaggaggaagaggag 1520
>gb|AC063968.5| Genomic sequence for Mus musculus, clone RP23-105K11, complete sequence Length = 222520 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 169882 gcaggaggaggaggaagaggag 169903
>gb|AC010038.5| Drosophila melanogaster 3L BAC RP98-14O14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172175 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 93790 gcaggaggaggaggaagaggag 93811
>dbj|AK017115.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933439C10 product:unclassifiable, full insert sequence Length = 1878 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 18 gcaggaggaggaggaagaggag 39
>gb|AC093192.2| Drosophila melanogaster 3L BAC RP98-48J18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 166862 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 100964 gcaggaggaggaggaagaggag 100943
>gb|AC105264.3| Drosophila melanogaster 3L BAC RP98-17K18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177583 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 15223 gcaggaggaggaggaagaggag 15202
>dbj|AK030920.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830456F11 product:unclassifiable, full insert sequence Length = 2629 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 42 gcaggaggaggaggaagaggag 63
>dbj|AK083027.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530035A16 product:hypothetical Glutamic acid-rich region containing protein, full insert sequence Length = 3138 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 1814 gcaggaggaggaggaagaggag 1835
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 285 aagaaggcgaagcagcagaagg 306 |||||||||||||||||||||| Sbjct: 1712171 aagaaggcgaagcagcagaagg 1712150 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 366 atcgacgagatcttcgaggcc 386 ||||||||||||||||||||| Sbjct: 297339 atcgacgagatcttcgaggcc 297319
>gb|AY095007.1| Drosophila melanogaster GH11843 full insert cDNA Length = 2610 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 1329 gcaggaggaggaggaagaggag 1350
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 626 cgccggcggcaccgccctctgc 647 |||||||||||||||||||||| Sbjct: 3339227 cgccggcggcaccgccctctgc 3339248 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 211 cgcgagagacggcggcggcggcggcc 236 |||| ||||||||||||||||||||| Sbjct: 12915968 cgcgggagacggcggcggcggcggcc 12915993 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 agagacggcggcggcggcggc 235 ||||||||||||||||||||| Sbjct: 2305911 agagacggcggcggcggcggc 2305931 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 55 gctccggcctttgatctcctcctcc 79 ||||||||||||| ||||||||||| Sbjct: 4797735 gctccggcctttgttctcctcctcc 4797711 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 216 gagacggcggcggcggcggcc 236 ||||||||||||||||||||| Sbjct: 12894377 gagacggcggcggcggcggcc 12894397 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 220 cggcggcggcggcggccaaga 240 ||||||||||||||||||||| Sbjct: 16623550 cggcggcggcggcggccaaga 16623570
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 19641576 gcaggaggaggaggaagaggag 19641597 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 215 agagacggcggcggcggcggcc 236 |||||||||||||||||||||| Sbjct: 24558360 agagacggcggcggcggcggcc 24558381 Score = 42.1 bits (21), Expect = 4.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 205 cggagacgcgagagacggcggcggcggcg 233 |||||||| | |||||||||||||||||| Sbjct: 3001268 cggagacgggggagacggcggcggcggcg 3001296 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagagga 433 ||||||||||||||||||||| Sbjct: 19075709 gcaggaggaggaggaagagga 19075689 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 220 cggcggcggcggcggccaaga 240 ||||||||||||||||||||| Sbjct: 28845309 cggcggcggcggcggccaaga 28845329
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 ctccccgcgccgcgccgccacc 38 |||||||||||||||||||||| Sbjct: 18287287 ctccccgcgccgcgccgccacc 18287308
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 cggcggcggcggcggccaagaagaag 245 |||||||||||||||||||| ||||| Sbjct: 7008510 cggcggcggcggcggccaaggagaag 7008535 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 cgcgccgcgccgccaccccca 42 ||||||||||||||||||||| Sbjct: 7018684 cgcgccgcgccgccaccccca 7018704 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 agagacggcggcggcggcggc 235 ||||||||||||||||||||| Sbjct: 7286982 agagacggcggcggcggcggc 7286962 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 216 gagacggcggcggcggcggcc 236 ||||||||||||||||||||| Sbjct: 33223501 gagacggcggcggcggcggcc 33223521
>gb|AC091858.2| Homo sapiens chromosome 5 clone CTD-2328C19, complete sequence Length = 95607 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 95523 gcaggaggaggaggaagaggag 95544
>emb|AL355531.16| Human DNA sequence from clone RP11-300B2 on chromosome 10 Contains the 5' end of the MGMT gene for O-6-methylguanine-DNA methyltransferase, complete sequence Length = 213887 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 144400 gcaggaggaggaggaagaggag 144379
>emb|AL158069.16| Human DNA sequence from clone RP13-57D9 on chromosome Xq11.2-13.2 Contains the gene for TED protein (TED), the 5' end of the ED1 gene for ectodermal dysplasia 1, anhidrotic, two novel genes and three CpG islands, complete sequence Length = 186538 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 409 agttgcaggaggaggaggaagaggag 434 ||||| |||||||||||||||||||| Sbjct: 144616 agttggaggaggaggaggaagaggag 144641
>emb|AL138690.19| Human DNA sequence from clone RP11-307O13 on chromosome 13q12.3-14.2 Contains the 5' end of the NBEA gene for neurobeachin (BCL8B FLJ10197 KIAA1544) and a CpG island, complete sequence Length = 186593 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1004 tgtaagagaatacatattttta 1025 |||||||||||||||||||||| Sbjct: 75013 tgtaagagaatacatattttta 75034
>emb|AL080274.21|HS1012F16 Human DNA sequence from clone RP5-1012F16 on chromosome 20 Contains a novel gene, ESTs, STSs and GSSs, complete sequence Length = 74539 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 409 agttgcaggaggaggaggaagaggag 434 ||||||||||||||||| |||||||| Sbjct: 62786 agttgcaggaggaggagaaagaggag 62761
>gb|AC010444.5| Homo sapiens chromosome 5 clone CTD-2234B10, complete sequence Length = 91489 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 37628 gcaggaggaggaggaagaggag 37649
>gb|AY210413.1| Homo sapiens cell-line A-431 cell-type epidermoid carcinoma mRNA, partial sequence Length = 653 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 49 gcaggaggaggaggaagaggag 70
>gb|AC153359.4| Mus musculus BAC clone RP23-477I1 from chromosome 9, complete sequence Length = 195269 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 125763 gcaggaggaggaggaagaggag 125784
>gb|AC155297.2| Mus musculus BAC clone RP24-238D1 from chromosome 13, complete sequence Length = 174487 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 873 acttgtttcaacaacaacaaaa 894 |||||||||||||||||||||| Sbjct: 46055 acttgtttcaacaacaacaaaa 46034
>gb|AC087330.6| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP23-3M10, complete sequence Length = 206093 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 99417 gcaggaggaggaggaagaggag 99438
>gb|AC158513.2| Mus musculus BAC clone RP24-404N1 from chromosome 9, complete sequence Length = 156478 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 18049 gcaggaggaggaggaagaggag 18028
>gb|AE008685.1|AE008685 Mus musculus T-cell receptor alpha/delta locus section 3 of 4 of the complete region Length = 400099 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 22205 gcaggaggaggaggaagaggag 22226
>gb|AE008684.1|AE008684 Mus musculus T-cell receptor alpha/delta locus section 2 of 4 of the complete region Length = 400099 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 21488 gcaggaggaggaggaagaggag 21509
>gb|AC146868.2| Xenopus tropicalis clone CH216-11K6, complete sequence Length = 190329 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 83127 gcaggaggaggaggaagaggag 83148
>emb|AL451017.1|NC12F11 Neurospora crassa DNA linkage group V Cosmid contig 12F11 Length = 74317 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 415 aggaggaggaggaagaggagtc 436 |||||||||||||||||||||| Sbjct: 35989 aggaggaggaggaagaggagtc 36010
>gb|AC158602.6| Mus musculus 10 BAC RP23-136G23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 182817 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 415 aggaggaggaggaagaggagtc 436 |||||||||||||||||||||| Sbjct: 84357 aggaggaggaggaagaggagtc 84378
>dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E07 Length = 159440 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 220 cggcggcggcggcggccaagaagaag 245 |||||||||||||||||||| ||||| Sbjct: 130328 cggcggcggcggcggccaaggagaag 130353 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 cgcgccgcgccgccaccccca 42 ||||||||||||||||||||| Sbjct: 140502 cgcgccgcgccgccaccccca 140522
>emb|AL662815.13| Mouse DNA sequence from clone RP23-361M22 on chromosome 1 Contains part of the gene for ortholog of human amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 19 (ALS2CR19) and a novel gene, complete sequence Length = 155204 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 150987 gcaggaggaggaggaagaggag 150966
>emb|AL592522.12| Mouse DNA sequence from clone RP23-210M6 on chromosome 11 Contains the genes for two novel 7 transmembrane receptor (rhodopsin family) domain-containing proteins, a high mobility group box 1 (Hmgb1) pseudogene, the Cias1 gene for cold autoinflammatory syndrome 1 homolog (human), a novel gene (4933439C10Rik), the gene for a novel protein (D130067D09), a ribosomal protein L18 (Rpl18) pseudogene, an ariadne homolog 2 (Drosophila) (Arih2) pseudogene, the gene for a novel zinc finger domain-containing protein, the 3' end of the gene for a novel protein and one CpG island, complete sequence Length = 157300 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 104127 gcaggaggaggaggaagaggag 104106
>gb|AC021093.16|AC021093 Homo sapiens chromosome 8 clone RP11-213I2, complete sequence Length = 157604 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 99148 gcaggaggaggaggaagaggag 99127
>gb|AC108219.3| Homo sapiens BAC clone RP11-730G16 from 2, complete sequence Length = 72133 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 409 agttgcaggaggaggaggaagaggag 434 ||||| |||||||||||||||||||| Sbjct: 38400 agttggaggaggaggaggaagaggag 38425
>gb|AC139676.3| Homo sapiens chromosome 8, clone RP13-648O9, complete sequence Length = 166153 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 63778 gcaggaggaggaggaagaggag 63799
>gb|AC146446.3| Pan troglodytes BAC clone RP43-5P22 from chromosome 7, complete sequence Length = 164152 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 58377 gcaggaggaggaggaagaggag 58398
>gb|AC154744.2| Mus musculus BAC clone RP24-394N17 from chromosome 12, complete sequence Length = 165140 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 10594 gcaggaggaggaggaagaggag 10615
>gb|AC157521.2| Mus musculus BAC clone RP23-103M13 from chromosome 15, complete sequence Length = 194306 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 92029 gcaggaggaggaggaagaggag 92050
>gb|AC150660.4| Mus musculus BAC clone RP23-41F9 from chromosome 15, complete sequence Length = 229655 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 216399 gcaggaggaggaggaagaggag 216420
>gb|AC151901.3| Mus musculus BAC clone RP23-271E15 from chromosome 10, complete sequence Length = 182748 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 34789 gcaggaggaggaggaagaggag 34810
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 614 cggcaaggccgacgccggcggcaccg 639 ||||||||||| |||||||||||||| Sbjct: 7340756 cggcaaggccggcgccggcggcaccg 7340781
>gb|AC084444.1|AC084444 Caenorhabditis briggsae cosmid CB014E04, complete sequence Length = 75003 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 7133 gcaggaggaggaggaagaggag 7154
>ref|XM_951143.1| Neurospora crassa OR74A hypothetical protein (NCU08793.1) partial mRNA Length = 1359 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Plus Query: 405 cgcaagttgcaggaggaggaggaagaggag 434 ||||||||| ||||||||||||| |||||| Sbjct: 953 cgcaagttggaggaggaggaggaggaggag 982
>gb|AC153493.6| Mus musculus 10 BAC RP23-23J2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 220442 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 182400 gcaggaggaggaggaagaggag 182421
>dbj|AK110948.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-H08, full insert sequence Length = 1396 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 626 cgccggcggcaccgccctctgc 647 |||||||||||||||||||||| Sbjct: 915 cgccggcggcaccgccctctgc 936
>gb|AC091683.53| Mus musculus strain C57BL/6J clone rp23-155l11 map 13, complete sequence Length = 236314 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 225908 gcaggaggaggaggaagaggag 225887
>dbj|AK100909.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132G24, full insert sequence Length = 2870 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 415 aggaggaggaggaagaggagtc 436 |||||||||||||||||||||| Sbjct: 22 aggaggaggaggaagaggagtc 1
>emb|BX819601.1|CNS0AA8H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB93ZA11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1547 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 516 gcaggaggaggaggaagaggag 537
>gb|AC005703.2|AC005703 Homo sapiens chromosome 17, clone hRPK.849_N_15, complete sequence Length = 233454 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 881 caacaacaacaaaactaaagct 902 |||||||||||||||||||||| Sbjct: 179138 caacaacaacaaaactaaagct 179117
>gb|AC124613.18| Mus musculus chromosome 1, clone RP24-380F12, complete sequence Length = 157784 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 85916 gcaggaggaggaggaagaggag 85895
>emb|BX648596.1|HSM808747 Homo sapiens mRNA; cDNA DKFZp686F12209 (from clone DKFZp686F12209) Length = 2862 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 1236 gcaggaggaggaggaagaggag 1257
>emb|BX544880.3| Mouse DNA sequence from clone RP23-119F1 on chromosome X, complete sequence Length = 208959 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 15622 gcaggaggaggaggaagaggag 15643
>gb|AC148877.2| Chlamydomonas reinhardtii clone cr-11B1, complete sequence Length = 52591 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 227 ggcggcggccaagaagaagacg 248 |||||||||||||||||||||| Sbjct: 46498 ggcggcggccaagaagaagacg 46477
>gb|AC150277.2| Mus musculus BAC clone RP23-97E12 from 18, complete sequence Length = 179399 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 136633 gcaggaggaggaggaagaggag 136654
>gb|AC152831.2| Ornithorhynchus anatinus chromosome UNK clone OABb-168A1, complete sequence Length = 139370 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 103982 gcaggaggaggaggaagaggag 104003
>gb|AC153432.9| Mus musculus 6 BAC RP23-110F19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 189225 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 89829 gcaggaggaggaggaagaggag 89850
>gb|AC005557.1|AC005557 Drosophila melanogaster, chromosome 3L, region 62A10-62B5, P1 clones DS02777, DS03222, DS02345, and DS04808, complete sequence Length = 257867 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 15517 gcaggaggaggaggaagaggag 15496
>emb|BX005187.9| Mouse DNA sequence from clone RP23-187O10 on chromosome X, complete sequence Length = 98612 Score = 44.1 bits (22), Expect = 1.2 Identities = 28/30 (93%) Strand = Plus / Minus Query: 327 aagaagccgaagccgaagaagcagaaggag 356 ||||||| ||||| |||||||||||||||| Sbjct: 18639 aagaagcagaagcagaagaagcagaaggag 18610
>gb|AC149605.7| Mus musculus BAC clone RP23-473E20 from 7, complete sequence Length = 195585 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 193701 gcaggaggaggaggaagaggag 193680
>emb|AL662979.3|OSJN00179 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0069D17, complete sequence Length = 147111 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 ctccccgcgccgcgccgccacc 38 |||||||||||||||||||||| Sbjct: 122961 ctccccgcgccgcgccgccacc 122982
>emb|CT010463.9| Mouse DNA sequence from clone RP23-193M19 on chromosome 12, complete sequence Length = 250364 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 107420 gcaggaggaggaggaagaggag 107441
>emb|CT025562.10| Mouse DNA sequence from clone RP24-225O12 on chromosome 14, complete sequence Length = 194430 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 64402 gcaggaggaggaggaagaggag 64423
>gb|AC004405.1|AC004405 Mus musculus ma36a240, complete sequence Length = 43178 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 240 gcaggaggaggaggaagaggag 261
>gb|AC004407.1|AC004407 Mus musculus mbac6, complete sequence Length = 119865 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 117535 gcaggaggaggaggaagaggag 117556
>gb|AC122881.4| Mus musculus BAC clone RP23-79J21 from 13, complete sequence Length = 221931 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 103753 gcaggaggaggaggaagaggag 103774
>gb|AC149611.6| Mus musculus BAC clone RP23-157P4 from 7, complete sequence Length = 217353 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 45564 gcaggaggaggaggaagaggag 45543
>gb|AC151477.1| Mus musculus BAC clone RP23-154G20 from 7, complete sequence Length = 212010 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 28866 gcaggaggaggaggaagaggag 28845
>gb|AC126054.5| Mus musculus BAC clone RP23-298O13 from 8, complete sequence Length = 233117 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 75318 gcaggaggaggaggaagaggag 75297
>gb|AC125070.4| Mus musculus BAC clone RP23-443A7 from 13, complete sequence Length = 208344 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 130742 gcaggaggaggaggaagaggag 130763
>gb|AC003994.1|AC003994 Mouse cosmid ma53a271 from 14D1-D2 (Mouse T-Cell Receptor Alpha Locus), complete sequence Length = 43576 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 7613 gcaggaggaggaggaagaggag 7634
>gb|AC068906.14| Mus musculus strain C57BL/6J chromosome 1 clone rp23-240p23, complete sequence Length = 192366 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 3392 gcaggaggaggaggaagaggag 3413
>gb|AC034109.24| Mus musculus strain C57BL/6J chromosome 1 clone rp23-88k7, complete sequence Length = 227773 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 3392 gcaggaggaggaggaagaggag 3413
>emb|AL928992.7| Mouse DNA sequence from clone RP23-208O9 on chromosome 2, complete sequence Length = 136064 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 37 gcaggaggaggaggaagaggag 16
>emb|AL683847.12| Mouse DNA sequence from clone RP23-109A3 on chromosome 4, complete sequence Length = 212973 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 144103 gcaggaggaggaggaagaggag 144082
>gb|AC152000.3| Ornithorhynchus anatinus chromosome UNK clone OABb-501A1, complete sequence Length = 149165 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 29433 gcaggaggaggaggaagaggag 29454
>emb|AL606932.10| Mouse DNA sequence from clone RP23-247I20 on chromosome 4, complete sequence Length = 188633 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 1231 gcaggaggaggaggaagaggag 1252
>emb|AL606918.9| Mouse DNA sequence from clone RP23-327O13 on chromosome 4, complete sequence Length = 192787 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 192018 gcaggaggaggaggaagaggag 192039
>emb|AL929570.7| Mouse DNA sequence from clone RP23-74G9 on chromosome 2, complete sequence Length = 230193 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 228230 gcaggaggaggaggaagaggag 228209
>emb|AL928735.9| Mouse DNA sequence from clone RP23-413M3 on chromosome 2, complete sequence Length = 187287 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 74770 gcaggaggaggaggaagaggag 74749 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 74881 gcaggaggaggaggaagaggag 74860
>emb|AL669921.13| Mouse DNA sequence from clone RP23-67P9 on chromosome 2, complete sequence Length = 203592 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 31888 gcaggaggaggaggaagaggag 31909
>emb|AL929397.6| Mouse DNA sequence from clone RP23-87N9 on chromosome 4, complete sequence Length = 48661 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 43054 gcaggaggaggaggaagaggag 43033
>emb|AL731822.31| Mouse DNA sequence from clone RP23-105H6 on chromosome 2, complete sequence Length = 218037 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 59517 gcaggaggaggaggaagaggag 59538 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 59556 gcaggaggaggaggaagaggag 59577
>emb|AL671916.5| Mouse DNA sequence from clone RP23-294O1 on chromosome X, complete sequence Length = 205436 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 171798 gcaggaggaggaggaagaggag 171819
>ref|NM_011378.1| Mus musculus transcriptional regulator, SIN3A (yeast) (Sin3a), mRNA gb|U22394.1|MMU22394 Mus musculus mSin3A (sin3A) mRNA, complete cds Length = 5009 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 545 cgaggagaagcggccgcggcgg 566 |||||||||||||||||||||| Sbjct: 5 cgaggagaagcggccgcggcgg 26
>gb|AC164108.2| Mus musculus BAC clone RP24-96K15 from chromosome 16, complete sequence Length = 180800 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 148669 gcaggaggaggaggaagaggag 148690
>gb|AC158147.2| Mus musculus BAC clone RP23-323H18 from chromosome 1, complete sequence Length = 197560 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 140163 gcaggaggaggaggaagaggag 140184
>gb|AC151905.4| Mus musculus BAC clone RP23-205J22 from chromosome 8, complete sequence Length = 214760 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 47380 gcaggaggaggaggaagaggag 47359
>gb|AC108908.16| Mus musculus chromosome 7, clone RP23-179K7, complete sequence Length = 220289 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 413 gcaggaggaggaggaagaggag 434 |||||||||||||||||||||| Sbjct: 175968 gcaggaggaggaggaagaggag 175947
>gb|L07105.1|NEUVMA3A Neurospora crassa proteolipid subunit of vacuolar ATPase (vma3) gene, complete cds Length = 2631 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 415 aggaggaggaggaagaggagtc 436 |||||||||||||||||||||| Sbjct: 858 aggaggaggaggaagaggagtc 879
>gb|EF013138.1| Messor denticornis abdominal-A (abd-A) gene, exon 1 and partial cds Length = 591 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 219 acggcggcggcggcggccaag 239 ||||||||||||||||||||| Sbjct: 407 acggcggcggcggcggccaag 387
>gb|EF013092.1| Anoplolepis gracilipes abdominal-A (abd-A) gene, exon 1 and partial cds Length = 600 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 219 acggcggcggcggcggccaag 239 ||||||||||||||||||||| Sbjct: 413 acggcggcggcggcggccaag 393
>gb|EF017720.1| Gallus gallus receptor tyrosine kinase-like orphan receptor 2 (ROR2) mRNA, complete cds Length = 2805 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 caggaggaggaggaagaggag 434 ||||||||||||||||||||| Sbjct: 2704 caggaggaggaggaagaggag 2724
>ref|XM_001232798.1| PREDICTED: Gallus gallus similar to receptor tyrosine kinase-like orphan receptor 2 (LOC769516), mRNA Length = 4163 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 caggaggaggaggaagaggag 434 ||||||||||||||||||||| Sbjct: 2701 caggaggaggaggaagaggag 2721
>ref|XR_026991.1| PREDICTED: Gallus gallus similar to Activating signal cointegrator 1 complex subunit 2 (LOC417016), mRNA Length = 2846 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 413 gcaggaggaggaggaagagga 433 ||||||||||||||||||||| Sbjct: 1965 gcaggaggaggaggaagagga 1985
>ref|XM_419806.2| PREDICTED: Gallus gallus similar to HSPC230 protein; HSPC230 gene (LOC421779), mRNA Length = 1051 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 caggaggaggaggaagaggag 434 ||||||||||||||||||||| Sbjct: 343 caggaggaggaggaagaggag 363
>gb|AC105049.5| Homo sapiens chromosome 8, clone RP11-299M14, complete sequence Length = 90402 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 caggaggaggaggaagaggag 434 ||||||||||||||||||||| Sbjct: 49572 caggaggaggaggaagaggag 49592
>gb|AC192010.3| Pan troglodytes BAC clone CH251-278H2 from chromosome 7, complete sequence Length = 184850 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 caggaggaggaggaagaggag 434 ||||||||||||||||||||| Sbjct: 122574 caggaggaggaggaagaggag 122594
>gb|CP000458.1| Burkholderia cenocepacia HI2424 chromosome 1, complete genome Length = 3483902 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 agagacggcggcggcggcggc 235 ||||||||||||||||||||| Sbjct: 3062120 agagacggcggcggcggcggc 3062140
>emb|CT829046.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN054N02, full insert sequence Length = 892 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 530 cggccacgacgaggtcgaggagaag 554 |||||||||||||| |||||||||| Sbjct: 174 cggccacgacgaggacgaggagaag 150
>emb|CT832010.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA208O18, full insert sequence Length = 890 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 agagacggcggcggcggcggc 235 ||||||||||||||||||||| Sbjct: 80 agagacggcggcggcggcggc 60
>ref|XM_001191757.1| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC579743 (LOC579743), mRNA Length = 1110 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 251 gaagaagcagaaggagagcaaggag 275 |||||||||| |||||||||||||| Sbjct: 183 gaagaagcaggaggagagcaaggag 207
>ref|XM_794962.2| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC579743 (LOC579743), mRNA Length = 1110 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 251 gaagaagcagaaggagagcaaggag 275 |||||||||| |||||||||||||| Sbjct: 183 gaagaagcaggaggagagcaaggag 207
>ref|NM_015356.3| Homo sapiens scribbled homolog (Drosophila) (SCRIB), transcript variant 2, mRNA Length = 5201 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 caggaggaggaggaagaggag 434 ||||||||||||||||||||| Sbjct: 2015 caggaggaggaggaagaggag 2035
>ref|NM_182706.3| Homo sapiens scribbled homolog (Drosophila) (SCRIB), transcript variant 1, mRNA Length = 5276 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 caggaggaggaggaagaggag 434 ||||||||||||||||||||| Sbjct: 2015 caggaggaggaggaagaggag 2035
>ref|NM_001074451.1| Oryza sativa (japonica cultivar-group) Os11g0488100 (Os11g0488100) mRNA, complete cds Length = 510 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 220 cggcggcggcggcggccaaga 240 ||||||||||||||||||||| Sbjct: 417 cggcggcggcggcggccaaga 437
>ref|NM_001067657.1| Oryza sativa (japonica cultivar-group) Os08g0177300 (Os08g0177300) mRNA, complete cds Length = 4177 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 216 gagacggcggcggcggcggcc 236 ||||||||||||||||||||| Sbjct: 74 gagacggcggcggcggcggcc 54
>ref|NM_001066400.1| Oryza sativa (japonica cultivar-group) Os07g0534700 (Os07g0534700) mRNA, complete cds Length = 2282 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 agagacggcggcggcggcggc 235 ||||||||||||||||||||| Sbjct: 121 agagacggcggcggcggcggc 101
>ref|NM_001065878.1| Oryza sativa (japonica cultivar-group) Os07g0270900 (Os07g0270900) mRNA, complete cds Length = 1497 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 220 cggcggcggcggcggccaaga 240 ||||||||||||||||||||| Sbjct: 129 cggcggcggcggcggccaaga 149
>ref|NM_001065621.1| Oryza sativa (japonica cultivar-group) Os07g0190000 (Os07g0190000) mRNA, complete cds Length = 2869 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 415 aggaggaggaggaagaggagt 435 ||||||||||||||||||||| Sbjct: 21 aggaggaggaggaagaggagt 1
>ref|NM_001063772.1| Oryza sativa (japonica cultivar-group) Os06g0234600 (Os06g0234600) mRNA, complete cds Length = 1551 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 216 gagacggcggcggcggcggcc 236 ||||||||||||||||||||| Sbjct: 1051 gagacggcggcggcggcggcc 1071
>ref|NM_001056608.1| Oryza sativa (japonica cultivar-group) Os03g0342100 (Os03g0342100) mRNA, complete cds Length = 912 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 530 cggccacgacgaggtcgaggagaag 554 |||||||||||||| |||||||||| Sbjct: 172 cggccacgacgaggacgaggagaag 148
>ref|NM_001055362.1| Oryza sativa (japonica cultivar-group) Os03g0126700 (Os03g0126700) mRNA, complete cds Length = 966 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 ggcggcggcggcggccaagaa 241 ||||||||||||||||||||| Sbjct: 549 ggcggcggcggcggccaagaa 569
>ref|NM_001054424.1| Oryza sativa (japonica cultivar-group) Os02g0709300 (Os02g0709300) mRNA, complete cds Length = 810 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 220 cggcggcggcggcggccaaga 240 ||||||||||||||||||||| Sbjct: 324 cggcggcggcggcggccaaga 344
>ref|NM_001054272.1| Oryza sativa (japonica cultivar-group) Os02g0679500 (Os02g0679500) mRNA, partial cds Length = 1695 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 415 aggaggaggaggaagaggagt 435 ||||||||||||||||||||| Sbjct: 214 aggaggaggaggaagaggagt 234
>ref|NM_001052178.1| Oryza sativa (japonica cultivar-group) Os02g0109200 (Os02g0109200) mRNA, partial cds Length = 2610 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 ccgcgccgcgccgccaccccc 41 ||||||||||||||||||||| Sbjct: 2487 ccgcgccgcgccgccaccccc 2467
>ref|NM_001050995.1| Oryza sativa (japonica cultivar-group) Os01g0784200 (Os01g0784200) mRNA, complete cds Length = 2571 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 216 gagacggcggcggcggcggcc 236 ||||||||||||||||||||| Sbjct: 1441 gagacggcggcggcggcggcc 1461
>emb|AM236080.1| Rhizobium leguminosarum bv. viciae chromosome complete genome, strain 3841 Length = 5057142 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 614 cggcaaggccgacgccggcgg 634 ||||||||||||||||||||| Sbjct: 1332332 cggcaaggccgacgccggcgg 1332312
>ref|XM_001172773.1| PREDICTED: Pan troglodytes hypothetical LOC473984 (LOC473984), mRNA Length = 2416 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 caggaggaggaggaagaggag 434 ||||||||||||||||||||| Sbjct: 455 caggaggaggaggaagaggag 435
>ref|XM_001160970.1| PREDICTED: Pan troglodytes hypothetical protein LOC742154 (LOC742154), mRNA Length = 2441 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 415 aggaggaggaggaagaggagt 435 ||||||||||||||||||||| Sbjct: 891 aggaggaggaggaagaggagt 911
>gb|DQ316052.1| Trypanosoma vivax isolate TviVeMe clone 12 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 490 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 557 gccgcggcggcgcaccaacga 577 ||||||||||||||||||||| Sbjct: 322 gccgcggcggcgcaccaacga 342
>gb|DQ316051.1| Trypanosoma vivax isolate TviVeMe clone 1 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 490 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 557 gccgcggcggcgcaccaacga 577 ||||||||||||||||||||| Sbjct: 322 gccgcggcggcgcaccaacga 342
>gb|DQ316050.1| Trypanosoma vivax isolate TviBrPo clone 6 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 490 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 557 gccgcggcggcgcaccaacga 577 ||||||||||||||||||||| Sbjct: 322 gccgcggcggcgcaccaacga 342
>gb|DQ316049.1| Trypanosoma vivax isolate TviBrPo clone 3 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 490 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 557 gccgcggcggcgcaccaacga 577 ||||||||||||||||||||| Sbjct: 322 gccgcggcggcgcaccaacga 342
>gb|DQ316048.1| Trypanosoma vivax isolate TviBrMi clone 4 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 490 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 557 gccgcggcggcgcaccaacga 577 ||||||||||||||||||||| Sbjct: 322 gccgcggcggcgcaccaacga 342
>gb|DQ316047.1| Trypanosoma vivax isolate TviBrMi clone 2 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 490 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 557 gccgcggcggcgcaccaacga 577 ||||||||||||||||||||| Sbjct: 322 gccgcggcggcgcaccaacga 342
>gb|DQ316046.1| Trypanosoma vivax isolate TviBrCa clone 13 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 490 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 557 gccgcggcggcgcaccaacga 577 ||||||||||||||||||||| Sbjct: 322 gccgcggcggcgcaccaacga 342
>gb|DQ316045.1| Trypanosoma vivax isolate TviBrCa clone 2 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 490 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 557 gccgcggcggcgcaccaacga 577 ||||||||||||||||||||| Sbjct: 322 gccgcggcggcgcaccaacga 342
>emb|CR407595.27| Zebrafish DNA sequence from clone CH211-220P15 in linkage group 4, complete sequence Length = 206289 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 caggaggaggaggaagaggag 434 ||||||||||||||||||||| Sbjct: 127709 caggaggaggaggaagaggag 127689
>gb|AC187771.2| Pongo pygmaeus abelii BAC clone CH276-67H12 from chromosome unknown, complete sequence Length = 213802 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 410 gttgcaggaggaggaggaagaggag 434 |||| |||||||||||||||||||| Sbjct: 53785 gttggaggaggaggaggaagaggag 53809
>ref|XM_001131937.1| PREDICTED: Homo sapiens hypothetical protein LOC732129 (LOC732129), mRNA Length = 2301 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 caggaggaggaggaagaggag 434 ||||||||||||||||||||| Sbjct: 1966 caggaggaggaggaagaggag 1986
>ref|XM_001133737.1| PREDICTED: Homo sapiens similar to Protein C2orf4 (C21orf19-like protein) (LOC731745), mRNA Length = 2158 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 caggaggaggaggaagaggag 434 ||||||||||||||||||||| Sbjct: 193 caggaggaggaggaagaggag 173
>ref|XM_001128457.1| PREDICTED: Homo sapiens hypothetical protein LOC728778 (LOC728778), mRNA Length = 2297 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 caggaggaggaggaagaggag 434 ||||||||||||||||||||| Sbjct: 1962 caggaggaggaggaagaggag 1982
>ref|XM_001129672.1| PREDICTED: Homo sapiens similar to Protein C2orf4 (C21orf19-like protein) (LOC728556), mRNA Length = 2154 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 caggaggaggaggaagaggag 434 ||||||||||||||||||||| Sbjct: 193 caggaggaggaggaagaggag 173
>ref|XM_001130021.1| PREDICTED: Homo sapiens similar to Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN (Phosphatase and tensin homolog) (Mutated in multiple advanced cancers 1) (LOC731292), mRNA Length = 2340 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 agagacggcggcggcggcggc 235 ||||||||||||||||||||| Sbjct: 86 agagacggcggcggcggcggc 106
>ref|XM_001131836.1| PREDICTED: Homo sapiens hypothetical protein LOC732094 (LOC732094), mRNA Length = 366 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 caggaggaggaggaagaggag 434 ||||||||||||||||||||| Sbjct: 110 caggaggaggaggaagaggag 130
>ref|XM_001131687.1| PREDICTED: Homo sapiens hypothetical protein LOC729896 (LOC729896), mRNA Length = 366 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 caggaggaggaggaagaggag 434 ||||||||||||||||||||| Sbjct: 110 caggaggaggaggaagaggag 130
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 653 cgactgcgactgctgcttctg 673 ||||||||||||||||||||| Sbjct: 4805802 cgactgcgactgctgcttctg 4805822
>gb|BT028171.1| Gasterosteus aculeatus clone CNB146-G04 mRNA sequence Length = 2806 Score = 42.1 bits (21), Expect = 4.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 410 gttgcaggaggaggaggaagaggag 434 |||| |||||||||||||||||||| Sbjct: 852 gttggaggaggaggaggaagaggag 828
>ref|XM_394245.3| PREDICTED: Apis mellifera similar to Puromycin sensitive aminopeptidase CG1009-PC, isoform C, transcript variant 1 (LOC410769), mRNA Length = 3908 Score = 42.1 bits (21), Expect = 4.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 362 cgagatcgacgagatcttcga 382 ||||||||||||||||||||| Sbjct: 1300 cgagatcgacgagatcttcga 1320 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 231,128,220 Number of extensions: 16712110 Number of successful extensions: 1124283 Number of sequences better than 10.0: 529 Number of HSP's gapped: 1124271 Number of HSP's successfully gapped: 575 Length of query: 1291 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1268 Effective length of database: 18,503,978,556 Effective search space: 23463044809008 Effective search space used: 23463044809008 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)