ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf98k10 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK104248:Os04g0488600 | 207 | 1e-53 | 2 | AK073488:Os04g0488600 | 207 | 1e-53 | 3 | AK058955:Os04g0488600 | 158 | 7e-39 | 4 | AK060198:Os04g0488600 | 72 | 5e-13 | 5 | AK059944:Os09g0287500 | 35 | 0.073 | 6 | AK073467:Os11g0124300 | 33 | 0.47 | 7 | AB180961:Os12g0122000 | 33 | 0.47 | 8 | AK063101:Os03g0852600 | 32 | 0.62 | 9 | AK111980: | 32 | 1.1 | 10 | AK120572:Os01g0689800 | 32 | 1.1 | 11 | AK110277:Os05g0500400 | 31 | 1.4 | 12 | AK102715:Os01g0875500 | 31 | 1.4 | 13 | AK071918:Os07g0227200 | 30 | 2.3 | 14 | AK110176: | 30 | 3.1 | 15 | AK106800:Os05g0158500 | 30 | 4.0 | 16 | AB110197:Os07g0122400 | 29 | 6.8 | 17 | AK103581:Os07g0122400 | 29 | 6.8 | 18 | AK073199:Os05g0417100 | 29 | 6.8 | 19 | AK072320:Os04g0401000 | 29 | 6.8 | 20 | AK070581:Os04g0401000 | 29 | 6.8 | 21 | Os02g0794900:Os02g0794900 | 28 | 8.9 | 22 | AY302059:Os03g0411800 | 28 | 8.9 | 23 | AK121551:Os03g0411800 | 28 | 8.9 | 24 | AK119332:Os10g0544600 | 28 | 8.9 | 25 | AK105882:Os10g0544600 | 28 | 8.9 | 26 | AK099554:Os10g0544600 | 28 | 8.9 | 27 | AK067968:Os03g0586700 | 28 | 8.9 | 28 | AK061763:Os10g0544600 | 28 | 8.9 |
|---|
>AK104248:Os04g0488600 | Length = 155 Score = 207 bits (527), Expect = 1e-53 Identities = 108/155 (69%), Positives = 118/155 (76%) Frame = +3 Query: 198 MACAPNYIATGLASYGLYTGARVLSPSYRNFPQKSSYKFLKVRALQGNXXXXXXXXXXXX 377 MACA I+ G A+ GLY AR+LSPSY+N+P++SSYKF+KVRA+QGN Sbjct: 1 MACASKTISIGFANSGLYGEARLLSPSYKNYPRRSSYKFIKVRAVQGNDGRRRLVDIIRT 60 Query: 378 XPELSRNYFKSGSRRXXXXXXXXXXXXYVAQTISLSFGALAVNDVIAAVVCVLLTEYVTK 557 PELSRNYF+S SRR YVAQTISLSFGAL VNDVIAAVVCVLLTEYVTK Sbjct: 61 IPELSRNYFRSRSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTK 120 Query: 558 FYYSRPKVTFAVALLNNFKMGFTYGLFIDAFKLAS 662 FYYSRPKVTF ALLNNFKMGFTYGLFIDAFKLAS Sbjct: 121 FYYSRPKVTFPFALLNNFKMGFTYGLFIDAFKLAS 155
>AK073488:Os04g0488600 | Length = 155 Score = 207 bits (527), Expect = 1e-53 Identities = 108/155 (69%), Positives = 118/155 (76%) Frame = +3 Query: 198 MACAPNYIATGLASYGLYTGARVLSPSYRNFPQKSSYKFLKVRALQGNXXXXXXXXXXXX 377 MACA I+ G A+ GLY AR+LSPSY+N+P++SSYKF+KVRA+QGN Sbjct: 1 MACASKTISIGFANSGLYGEARLLSPSYKNYPRRSSYKFIKVRAVQGNDGRRRLVDIIRT 60 Query: 378 XPELSRNYFKSGSRRXXXXXXXXXXXXYVAQTISLSFGALAVNDVIAAVVCVLLTEYVTK 557 PELSRNYF+S SRR YVAQTISLSFGAL VNDVIAAVVCVLLTEYVTK Sbjct: 61 IPELSRNYFRSRSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTK 120 Query: 558 FYYSRPKVTFAVALLNNFKMGFTYGLFIDAFKLAS 662 FYYSRPKVTF ALLNNFKMGFTYGLFIDAFKLAS Sbjct: 121 FYYSRPKVTFPFALLNNFKMGFTYGLFIDAFKLAS 155
>AK058955:Os04g0488600 | Length = 116 Score = 158 bits (399), Expect = 7e-39 Identities = 84/116 (72%), Positives = 87/116 (75%) Frame = +3 Query: 315 LKVRALQGNXXXXXXXXXXXXXPELSRNYFKSGSRRXXXXXXXXXXXXYVAQTISLSFGA 494 +KVRA+QGN PELSRNYF+S SRR YVAQTISLSFGA Sbjct: 1 IKVRAVQGNDGRRRLVDIIRTIPELSRNYFRSRSRRALFGGISLLGGFYVAQTISLSFGA 60 Query: 495 LAVNDVIAAVVCVLLTEYVTKFYYSRPKVTFAVALLNNFKMGFTYGLFIDAFKLAS 662 L VNDVIAAVVCVLLTEYVTKFYYSRPKVTF ALLNNFKMGFTYGLFIDAFKLAS Sbjct: 61 LGVNDVIAAVVCVLLTEYVTKFYYSRPKVTFPFALLNNFKMGFTYGLFIDAFKLAS 116
>AK060198:Os04g0488600 | Length = 36 Score = 72.4 bits (176), Expect = 5e-13 Identities = 34/36 (94%), Positives = 34/36 (94%) Frame = +3 Query: 555 KFYYSRPKVTFAVALLNNFKMGFTYGLFIDAFKLAS 662 KFYYSRPKVTF ALLNNFKMGFTYGLFIDAFKLAS Sbjct: 1 KFYYSRPKVTFPFALLNNFKMGFTYGLFIDAFKLAS 36
>AK059944:Os09g0287500 | Length = 196 Score = 35.4 bits (80), Expect = 0.073 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 6/74 (8%) Frame = +3 Query: 459 YVAQTISLSFGALAVNDVIAAVVCVLLTEYVTKFYY----SRPKVTF--AVALLNNFKMG 620 Y A ++ G DV A + V E + Y SRP F + ++N +K G Sbjct: 123 YTANALATVLGQTGDWDVFVAAIVVATIEGIGMLMYRKPASRPPGRFWSMITMVNYWKAG 182 Query: 621 FTYGLFIDAFKLAS 662 G F+DAFK+ S Sbjct: 183 VCLGFFVDAFKVGS 196
>AK073467:Os11g0124300 | Length = 651 Score = 32.7 bits (73), Expect = 0.47 Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 4/59 (6%) Frame = +1 Query: 574 LRLPSPSHSSTISRWA----SHMAFSLMPSSLPADLRYLLLVLHMHFHHSK*AKMVKKR 738 L PS S S+T S ++ SH SL+P LP+D LL + H HH A MV+KR Sbjct: 7 LLFPSSSSSATHSSYSPSSSSHAITSLLPP-LPSDHHLLLYLDHQEQHHLA-AAMVRKR 63
>AB180961:Os12g0122000 | Length = 660 Score = 32.7 bits (73), Expect = 0.47 Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 4/59 (6%) Frame = +1 Query: 574 LRLPSPSHSSTISRWA----SHMAFSLMPSSLPADLRYLLLVLHMHFHHSK*AKMVKKR 738 L PS S S+T S ++ SH SL+P LP+D LL + H HH A MV+KR Sbjct: 7 LLFPSSSSSATHSSYSPSSSSHAITSLLPP-LPSDHHLLLYLDHQEQHHLA-AAMVRKR 63
>AK063101:Os03g0852600 | Length = 206 Score = 32.3 bits (72), Expect = 0.62 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 5/70 (7%) Frame = +3 Query: 459 YVAQTISLSFGALAVNDVIAAVVCVLLTEYVTKFYYSRP-----KVTFAVALLNNFKMGF 623 Y A + G D+++A + V + E + Y ++ + + N +K G Sbjct: 114 YCATAFATVIGQTGDWDILSAGLAVAIVEGIGALMYRASFAFLGRIRKMITIFNYWKAGL 173 Query: 624 TYGLFIDAFK 653 T GLF+D+FK Sbjct: 174 TLGLFLDSFK 183
>AK111980: | Length = 167 Score = 31.6 bits (70), Expect = 1.1 Identities = 19/54 (35%), Positives = 29/54 (53%) Frame = -3 Query: 180 PARLQMAERILQRNCVEQLAREPRPPRKSRASGEAGSQSAPPDCNYGGVRAGFS 19 P + + AE L+ E++ R P RK+RA+ AG +APP + G+R S Sbjct: 112 PLQGRHAEVDLEGLLAEEVHRRPDASRKARAA-PAGDDAAPPPATHEGIREATS 164
>AK120572:Os01g0689800 | Length = 412 Score = 31.6 bits (70), Expect = 1.1 Identities = 14/52 (26%), Positives = 26/52 (50%) Frame = -3 Query: 210 AHTPYKPPSPPARLQMAERILQRNCVEQLAREPRPPRKSRASGEAGSQSAPP 55 A + PP+PP+ +A+ R + +++R P R+ G+A + A P Sbjct: 58 ARFAFFPPTPPSYTVVADAATGRLAIPEISRPPARRRRRDGGGDASASGAAP 109
>AK110277:Os05g0500400 | Length = 340 Score = 31.2 bits (69), Expect = 1.4 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%) Frame = -3 Query: 195 KPPSPPARLQMAERILQRNCVEQ--LAREPRPPR--KSRASGEAGSQSAPP 55 KP PP Q A QR+ + L RE +PPR +S +S +AG+ +PP Sbjct: 16 KPSFPPPSRQFAPPQRQRSLLHLSLLLREQQPPRPVRSSSSTQAGAAPSPP 66
>AK102715:Os01g0875500 | Length = 919 Score = 31.2 bits (69), Expect = 1.4 Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 6/66 (9%) Frame = -3 Query: 348 HRHFPAGHGP*--ETCKRISAGSSCSLVRVP----LPPYITHSWQGQWQYNLAHTPYKPP 187 HR GHG E C RI + S V P LPP+ + LAHTPY+PP Sbjct: 5 HRRRDCGHGAAHRERC-RIQSKQLHSTVPTPPARRLPPHAILYHHHHHRVVLAHTPYRPP 63 Query: 186 SPPARL 169 A + Sbjct: 64 PSTAAM 69
>AK071918:Os07g0227200 | Length = 223 Score = 30.4 bits (67), Expect = 2.3 Identities = 26/66 (39%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Frame = -3 Query: 258 PPYITHSWQGQWQYNLAHTPYKPPSPPARLQMAERILQRNCVEQL-AREPRPPRKSRASG 82 PP IT S Q Q+ AH + P PP L AE +L + + AR P PPR SR Sbjct: 93 PPEITKSLNSQNQF--AHQTSQIPLPPV-LGFAEELLSFHPWRRGGARRPPPPRPSRWPT 149 Query: 81 EAGSQS 64 S+S Sbjct: 150 PPSSRS 155
>AK110176: | Length = 1237 Score = 30.0 bits (66), Expect = 3.1 Identities = 12/41 (29%), Positives = 23/41 (56%) Frame = -3 Query: 297 SAGSSCSLVRVPLPPYITHSWQGQWQYNLAHTPYKPPSPPA 175 +A S++ P P ++ S G +YN A++P + P+ P+ Sbjct: 1194 AASPHMSMMGAPYPGFVAQSGVGNSEYNAANSPSQRPNKPS 1234
>AK106800:Os05g0158500 | Length = 482 Score = 29.6 bits (65), Expect = 4.0 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = -3 Query: 825 SFYASNGPMFTWKYKTKKGMYPCNTSHGVAFFH 727 +F+A+N F W+ K G PC +S+ +F+ Sbjct: 311 AFFANNQEQFRWRIKMFSGYDPCYSSYAEDYFN 343
>AB110197:Os07g0122400 | Length = 354 Score = 28.9 bits (63), Expect = 6.8 Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 5/49 (10%) Frame = -2 Query: 538 SRTHTTAAITSFTAKAPND-----RDIVCAT*KPPSSAMPPKRALLDPL 407 S T +TAA T T D R I A KP S+ PPKRA D L Sbjct: 281 SSTLSTAATTGSTGSTVTDLGVVGRGIKRANIKPISAEPPPKRAAADSL 329
>AK103581:Os07g0122400 | Length = 469 Score = 28.9 bits (63), Expect = 6.8 Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 5/49 (10%) Frame = -2 Query: 538 SRTHTTAAITSFTAKAPND-----RDIVCAT*KPPSSAMPPKRALLDPL 407 S T +TAA T T D R I A KP S+ PPKRA D L Sbjct: 396 SSTLSTAATTGSTGSTVTDLGVVGRGIKRANIKPISAEPPPKRAAADSL 444
>AK073199:Os05g0417100 | Length = 614 Score = 28.9 bits (63), Expect = 6.8 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 8/59 (13%) Frame = -3 Query: 213 LAHTPYKPPSPPARLQMAERILQRNCVEQLAREPRPPRKSRAS--------GEAGSQSA 61 L H P PP PP + L R + ++A P P R S AS GE G+ A Sbjct: 31 LLHRPPPPPPPPRPPLPPFQTLARGILPRIAARPVPRRFSTASCSSTLFRVGECGAPGA 89
>AK072320:Os04g0401000 | Length = 266 Score = 28.9 bits (63), Expect = 6.8 Identities = 22/87 (25%), Positives = 28/87 (32%), Gaps = 5/87 (5%) Frame = -3 Query: 282 CSLVRVPLPPYITHSWQGQWQYNLAHTPYKPPSPPARLQMAERILQRNCVEQLAREPRPP 103 C LV P P + + + GQW P PP PP +EP PP Sbjct: 160 CKLVPYPYP--VPYPYAGQWCCPKPEPPKPPPEPP-------------------KEPEPP 198 Query: 102 RKSRASGE-----AGSQSAPPDCNYGG 37 + S + PP C G Sbjct: 199 KPCGCSHAFVCVCKPAPPPPPPCGCSG 225
>AK070581:Os04g0401000 | Length = 266 Score = 28.9 bits (63), Expect = 6.8 Identities = 22/87 (25%), Positives = 28/87 (32%), Gaps = 5/87 (5%) Frame = -3 Query: 282 CSLVRVPLPPYITHSWQGQWQYNLAHTPYKPPSPPARLQMAERILQRNCVEQLAREPRPP 103 C LV P P + + + GQW P PP PP +EP PP Sbjct: 160 CKLVPYPYP--VPYPYAGQWCCPKPEPPKPPPEPP-------------------KEPEPP 198 Query: 102 RKSRASGE-----AGSQSAPPDCNYGG 37 + S + PP C G Sbjct: 199 KPCGCSHAFVCVCKPAPPPPPPCGCSG 225
>Os02g0794900:Os02g0794900 | Length = 1357 Score = 28.5 bits (62), Expect = 8.9 Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 3/73 (4%) Frame = -3 Query: 264 PLPPYITHSWQGQWQYNLAHTPYKPPSPPARLQMAERI---LQRNCVEQLAREPRPPRKS 94 P PP T+S + P PP P + + + N V P PP S Sbjct: 784 PPPPSQTNSLVSSFPSTSKRIPPPPPPPSQTSSLVSSLPSSRKGNDVAAPRPPPPPPLYS 843 Query: 93 RASGEAGSQSAPP 55 R+S + SAPP Sbjct: 844 RSSHVTSAPSAPP 856
>AY302059:Os03g0411800 | Length = 358 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%) Frame = +2 Query: 104 GGRGSRASCSTQ--FRCRILSAIWSRAGGDGG 193 GGRG+RAS + C + W+ GG GG Sbjct: 3 GGRGARASLHLHLAWLCAFATTAWAHGGGGGG 34
>AK121551:Os03g0411800 | Length = 358 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%) Frame = +2 Query: 104 GGRGSRASCSTQ--FRCRILSAIWSRAGGDGG 193 GGRG+RAS + C + W+ GG GG Sbjct: 3 GGRGARASLHLHLAWLCAFATTAWAHGGGGGG 34
>AK119332:Os10g0544600 | Length = 233 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +2 Query: 74 PASPEALDFLGGRGSRASCSTQFRCRILSAI 166 P +PE + + GG S + F CR+L A+ Sbjct: 12 PVAPEVVQWAGGADGFGSAAIGFACRVLCAV 42
>AK105882:Os10g0544600 | Length = 233 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +2 Query: 74 PASPEALDFLGGRGSRASCSTQFRCRILSAI 166 P +PE + + GG S + F CR+L A+ Sbjct: 12 PVAPEVVQWAGGADGFGSAAIGFACRVLCAV 42
>AK099554:Os10g0544600 | Length = 233 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +2 Query: 74 PASPEALDFLGGRGSRASCSTQFRCRILSAI 166 P +PE + + GG S + F CR+L A+ Sbjct: 12 PVAPEVVQWAGGADGFGSAAIGFACRVLCAV 42
>AK067968:Os03g0586700 | Length = 1256 Score = 28.5 bits (62), Expect = 8.9 Identities = 10/41 (24%), Positives = 21/41 (51%) Frame = -1 Query: 608 IVEECDGEGNLRSAVVELCDILGQQDTHNRCYNIVHGQGTE 486 ++++C N+R AV++ ++ QQ R + +G E Sbjct: 749 VIDKCSALQNIRQAVLQYTKVINQQHVEQRVKRVALNRGAE 789
>AK061763:Os10g0544600 | Length = 233 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +2 Query: 74 PASPEALDFLGGRGSRASCSTQFRCRILSAI 166 P +PE + + GG S + F CR+L A+ Sbjct: 12 PVAPEVVQWAGGADGFGSAAIGFACRVLCAV 42 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 34,790,194 Number of extensions: 854015 Number of successful extensions: 2697 Number of sequences better than 10.0: 28 Number of HSP's gapped: 2687 Number of HSP's successfully gapped: 28 Length of query: 369 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 267 Effective length of database: 11,315,673 Effective search space: 3021284691 Effective search space used: 3021284691 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
