ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf98k10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q1XDS2:YCF20_PORYE Uncharacterized protein ycf20 - Porphyra yezo... 53 3e-06
2P51214:YCF20_PORPU Uncharacterized protein ycf20 - Porphyra purp... 51 1e-05
3P72983:YC20L_SYNY3 Ycf20-like protein - Synechocystis sp. (strai... 46 3e-04
4Q9MUL5:YCF20_MESVI Uncharacterized protein ycf20 - Mesostigma vi... 40 0.017
5O80813:YC20L_ARATH Ycf20-like protein - Arabidopsis thaliana (Mo... 39 0.038
6P34813:YCF20_AGLNE Uncharacterized protein ycf20 - Aglaothamnion... 38 0.085
7P48409:YCF20_GALSU Uncharacterized protein ycf20 - Galdieria sul... 33 2.1
8Q9MVP1:YCF20_CYACA Uncharacterized protein ycf20 - Cyanidium cal... 33 2.7
9Q9RU19:QUEA_DEIRA S-adenosylmethionine:tRNA ribosyltransferase-i... 32 6.1
10Q922Y1:SAKS1_MOUSE SAPK substrate protein 1 - Mus musculus (Mouse) 31 8.0
11Q6ZVN8:RGMC_HUMAN Hemojuvelin precursor - Homo sapiens (Human) 31 8.0

>Q1XDS2:YCF20_PORYE Uncharacterized protein ycf20 - Porphyra yezoensis|
          Length = 108
 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 27/52 (51%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
 Frame = +3

Query: 510 VIAAVVCVLLTEYVTKFYYSRPK-VTFAVALLNNFKMGFTYGLFIDAFKLAS 662
           +IAA + V  TE  +K  YS  K +   + L NNFK+G TYGLF+DAFKL S
Sbjct: 57  IIAASLIVAATELTSKIVYSSHKQLNIKINLFNNFKIGITYGLFVDAFKLGS 108



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>P51214:YCF20_PORPU Uncharacterized protein ycf20 - Porphyra purpurea|
          Length = 108

 Score = 50.8 bits (120), Expect = 1e-05
 Identities = 27/52 (51%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
 Frame = +3

Query: 510 VIAAVVCVLLTEYVTKFYYS-RPKVTFAVALLNNFKMGFTYGLFIDAFKLAS 662
           +IAA + V   E V+K  YS + K    + LLNN K+G TYGLF+DAFKL S
Sbjct: 57  IIAASLIVAAIELVSKIVYSNKKKYGVRINLLNNLKIGITYGLFVDAFKLGS 108



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>P72983:YC20L_SYNY3 Ycf20-like protein - Synechocystis sp. (strain PCC 6803)|
          Length = 109

 Score = 45.8 bits (107), Expect = 3e-04
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
 Frame = +3

Query: 399 YFKSGSRRXXXXXXXXXXXXYVAQTISLSFGALAVNDVIAAVVCVLLTEYVTKFYYSR-- 572
           +F++  RR            +V   ++ + G  +  DV+ A   +L  E V +++Y R  
Sbjct: 20  FFRNPWRRISLSLLSFLFGFFVGTAVATTAGQNSQWDVVCAAFILLFCELVNRWFYRRGV 79

Query: 573 PKVTFAVALLNNFKMGFTYGLFIDAFKLAS 662
                   +LN FKMG +Y LF++AFKL S
Sbjct: 80  KMGDLQAEVLNIFKMGVSYSLFLEAFKLGS 109



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>Q9MUL5:YCF20_MESVI Uncharacterized protein ycf20 - Mesostigma viride|
          Length = 116

 Score = 40.0 bits (92), Expect = 0.017
 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
 Frame = +3

Query: 459 YVAQTISLSFGALAVNDVIAAVVCVLLTEYVTKFYYSRP----KVTFAVALL-----NNF 611
           ++A  ++  FG     DV+ A + V + E +    YS+     K  F ++ L     N  
Sbjct: 40  FIATVLATVFGQTGDWDVLVAGILVAMIEILGNKMYSKKYISKKQVFDISFLSLIGINYI 99

Query: 612 KMGFTYGLFIDAFKLAS 662
           K+G  +GLF+DAFKL S
Sbjct: 100 KIGLIFGLFVDAFKLGS 116



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>O80813:YC20L_ARATH Ycf20-like protein - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 121

 Score = 38.9 bits (89), Expect = 0.038
 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
 Frame = +3

Query: 459 YVAQTISLSFGALAVNDVIAAVVCVLLTEYVTKFYYSRP-------KVTFAVALLNNFKM 617
           Y A  ++   G     DV+ A + V   E +    Y +P       K+   V  +N +K 
Sbjct: 47  YTANALATILGQTGDWDVLVAGIVVAAIEGIGMLMYKKPSSSMFSGKLQSFVVFMNFWKA 106

Query: 618 GFTYGLFIDAFKLAS 662
           G   GLF+DAFKL S
Sbjct: 107 GVCLGLFVDAFKLGS 121



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>P34813:YCF20_AGLNE Uncharacterized protein ycf20 - Aglaothamnion neglectum (Red alga)|
          Length = 100

 Score = 37.7 bits (86), Expect = 0.085
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
 Frame = +3

Query: 510 VIAAVVCVLLTEYVTKFYYSRPKV--TFAVALLNNFKMGFTYGLFIDAFKLAS 662
           +I A++ V + E ++   YS  K      V  +N  K+G  YGLF+D+FKL S
Sbjct: 48  LITALLIVGINETMSALIYSYKKYENNIIVKTINGIKIGIIYGLFVDSFKLGS 100



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>P48409:YCF20_GALSU Uncharacterized protein ycf20 - Galdieria sulphuraria (Red alga)|
          Length = 83

 Score = 33.1 bits (74), Expect = 2.1
 Identities = 13/20 (65%), Positives = 16/20 (80%)
 Frame = +3

Query: 603 NNFKMGFTYGLFIDAFKLAS 662
           N FK+G  YGL++DAFKL S
Sbjct: 64  NGFKIGLIYGLYLDAFKLGS 83



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>Q9MVP1:YCF20_CYACA Uncharacterized protein ycf20 - Cyanidium caldarium|
          Length = 101

 Score = 32.7 bits (73), Expect = 2.7
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
 Frame = +3

Query: 522 VVCVLLTEYVTKFYYSRPKVTF--------AVALLNNFKMGFTYGLFIDAFKLAS 662
           +   +L   V  F Y + K  F            +N  K+G  YGLFIDAFKL S
Sbjct: 47  LTAAILISIVELFNYLKHKFQFNDRKSGYNCFFFINLAKLGLLYGLFIDAFKLGS 101



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>Q9RU19:QUEA_DEIRA S-adenosylmethionine:tRNA ribosyltransferase-isomerase -|
           Deinococcus radiodurans
          Length = 362

 Score = 31.6 bits (70), Expect = 6.1
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
 Frame = -3

Query: 270 RVPLPPYIT-----HSWQGQWQYNLAHTPYKPPSPPARLQMAERILQR 142
           R+PLPPYI       +W+ ++Q   A TP    +P A L     +L R
Sbjct: 162 RLPLPPYINAGDSDETWRERYQTVYAKTPGSVAAPTAGLHFTPELLAR 209



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>Q922Y1:SAKS1_MOUSE SAPK substrate protein 1 - Mus musculus (Mouse)|
          Length = 297

 Score = 31.2 bits (69), Expect = 8.0
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = -3

Query: 174 RLQMAERILQRNCVEQLAREPRPPRKSRASGEAGSQSAPPDCNYGGVRAGFSQE 13
           R + AE +  R  V +     +  R  +  G  GS+S+PP  + G V +  SQE
Sbjct: 151 RREKAEELAARQRVREKIERDKAERAKKYGGSVGSRSSPPATDPGPVPSSPSQE 204



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>Q6ZVN8:RGMC_HUMAN Hemojuvelin precursor - Homo sapiens (Human)|
          Length = 426

 Score = 31.2 bits (69), Expect = 8.0
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = -3

Query: 153 ILQRNCVEQLAREPRPPRKSRASGEAGSQSAPPDCNYGG 37
           ++Q NC  Q    P PPR     G      AP  C+Y G
Sbjct: 114 MIQHNCSRQGPTAPPPPRGPALPGAGSGLPAPDPCDYEG 152


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 207,814,220
Number of extensions: 4792253
Number of successful extensions: 11927
Number of sequences better than 10.0: 11
Number of HSP's gapped: 11920
Number of HSP's successfully gapped: 11
Length of query: 369
Length of database: 100,686,439
Length adjustment: 115
Effective length of query: 254
Effective length of database: 69,142,514
Effective search space: 17562198556
Effective search space used: 17562198556
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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