Clone Name | FLbaf98k10 |
---|---|
Clone Library Name | barley_pub |
>Q1XDS2:YCF20_PORYE Uncharacterized protein ycf20 - Porphyra yezoensis| Length = 108 Score = 52.8 bits (125), Expect = 3e-06 Identities = 27/52 (51%), Positives = 34/52 (65%), Gaps = 1/52 (1%) Frame = +3 Query: 510 VIAAVVCVLLTEYVTKFYYSRPK-VTFAVALLNNFKMGFTYGLFIDAFKLAS 662 +IAA + V TE +K YS K + + L NNFK+G TYGLF+DAFKL S Sbjct: 57 IIAASLIVAATELTSKIVYSSHKQLNIKINLFNNFKIGITYGLFVDAFKLGS 108
>P51214:YCF20_PORPU Uncharacterized protein ycf20 - Porphyra purpurea| Length = 108 Score = 50.8 bits (120), Expect = 1e-05 Identities = 27/52 (51%), Positives = 34/52 (65%), Gaps = 1/52 (1%) Frame = +3 Query: 510 VIAAVVCVLLTEYVTKFYYS-RPKVTFAVALLNNFKMGFTYGLFIDAFKLAS 662 +IAA + V E V+K YS + K + LLNN K+G TYGLF+DAFKL S Sbjct: 57 IIAASLIVAAIELVSKIVYSNKKKYGVRINLLNNLKIGITYGLFVDAFKLGS 108
>P72983:YC20L_SYNY3 Ycf20-like protein - Synechocystis sp. (strain PCC 6803)| Length = 109 Score = 45.8 bits (107), Expect = 3e-04 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 2/90 (2%) Frame = +3 Query: 399 YFKSGSRRXXXXXXXXXXXXYVAQTISLSFGALAVNDVIAAVVCVLLTEYVTKFYYSR-- 572 +F++ RR +V ++ + G + DV+ A +L E V +++Y R Sbjct: 20 FFRNPWRRISLSLLSFLFGFFVGTAVATTAGQNSQWDVVCAAFILLFCELVNRWFYRRGV 79 Query: 573 PKVTFAVALLNNFKMGFTYGLFIDAFKLAS 662 +LN FKMG +Y LF++AFKL S Sbjct: 80 KMGDLQAEVLNIFKMGVSYSLFLEAFKLGS 109
>Q9MUL5:YCF20_MESVI Uncharacterized protein ycf20 - Mesostigma viride| Length = 116 Score = 40.0 bits (92), Expect = 0.017 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 9/77 (11%) Frame = +3 Query: 459 YVAQTISLSFGALAVNDVIAAVVCVLLTEYVTKFYYSRP----KVTFAVALL-----NNF 611 ++A ++ FG DV+ A + V + E + YS+ K F ++ L N Sbjct: 40 FIATVLATVFGQTGDWDVLVAGILVAMIEILGNKMYSKKYISKKQVFDISFLSLIGINYI 99 Query: 612 KMGFTYGLFIDAFKLAS 662 K+G +GLF+DAFKL S Sbjct: 100 KIGLIFGLFVDAFKLGS 116
>O80813:YC20L_ARATH Ycf20-like protein - Arabidopsis thaliana (Mouse-ear cress)| Length = 121 Score = 38.9 bits (89), Expect = 0.038 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 7/75 (9%) Frame = +3 Query: 459 YVAQTISLSFGALAVNDVIAAVVCVLLTEYVTKFYYSRP-------KVTFAVALLNNFKM 617 Y A ++ G DV+ A + V E + Y +P K+ V +N +K Sbjct: 47 YTANALATILGQTGDWDVLVAGIVVAAIEGIGMLMYKKPSSSMFSGKLQSFVVFMNFWKA 106 Query: 618 GFTYGLFIDAFKLAS 662 G GLF+DAFKL S Sbjct: 107 GVCLGLFVDAFKLGS 121
>P34813:YCF20_AGLNE Uncharacterized protein ycf20 - Aglaothamnion neglectum (Red alga)| Length = 100 Score = 37.7 bits (86), Expect = 0.085 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%) Frame = +3 Query: 510 VIAAVVCVLLTEYVTKFYYSRPKV--TFAVALLNNFKMGFTYGLFIDAFKLAS 662 +I A++ V + E ++ YS K V +N K+G YGLF+D+FKL S Sbjct: 48 LITALLIVGINETMSALIYSYKKYENNIIVKTINGIKIGIIYGLFVDSFKLGS 100
>P48409:YCF20_GALSU Uncharacterized protein ycf20 - Galdieria sulphuraria (Red alga)| Length = 83 Score = 33.1 bits (74), Expect = 2.1 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = +3 Query: 603 NNFKMGFTYGLFIDAFKLAS 662 N FK+G YGL++DAFKL S Sbjct: 64 NGFKIGLIYGLYLDAFKLGS 83
>Q9MVP1:YCF20_CYACA Uncharacterized protein ycf20 - Cyanidium caldarium| Length = 101 Score = 32.7 bits (73), Expect = 2.7 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 8/55 (14%) Frame = +3 Query: 522 VVCVLLTEYVTKFYYSRPKVTF--------AVALLNNFKMGFTYGLFIDAFKLAS 662 + +L V F Y + K F +N K+G YGLFIDAFKL S Sbjct: 47 LTAAILISIVELFNYLKHKFQFNDRKSGYNCFFFINLAKLGLLYGLFIDAFKLGS 101
>Q9RU19:QUEA_DEIRA S-adenosylmethionine:tRNA ribosyltransferase-isomerase -| Deinococcus radiodurans Length = 362 Score = 31.6 bits (70), Expect = 6.1 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 5/48 (10%) Frame = -3 Query: 270 RVPLPPYIT-----HSWQGQWQYNLAHTPYKPPSPPARLQMAERILQR 142 R+PLPPYI +W+ ++Q A TP +P A L +L R Sbjct: 162 RLPLPPYINAGDSDETWRERYQTVYAKTPGSVAAPTAGLHFTPELLAR 209
>Q922Y1:SAKS1_MOUSE SAPK substrate protein 1 - Mus musculus (Mouse)| Length = 297 Score = 31.2 bits (69), Expect = 8.0 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = -3 Query: 174 RLQMAERILQRNCVEQLAREPRPPRKSRASGEAGSQSAPPDCNYGGVRAGFSQE 13 R + AE + R V + + R + G GS+S+PP + G V + SQE Sbjct: 151 RREKAEELAARQRVREKIERDKAERAKKYGGSVGSRSSPPATDPGPVPSSPSQE 204
>Q6ZVN8:RGMC_HUMAN Hemojuvelin precursor - Homo sapiens (Human)| Length = 426 Score = 31.2 bits (69), Expect = 8.0 Identities = 14/39 (35%), Positives = 17/39 (43%) Frame = -3 Query: 153 ILQRNCVEQLAREPRPPRKSRASGEAGSQSAPPDCNYGG 37 ++Q NC Q P PPR G AP C+Y G Sbjct: 114 MIQHNCSRQGPTAPPPPRGPALPGAGSGLPAPDPCDYEG 152 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 207,814,220 Number of extensions: 4792253 Number of successful extensions: 11927 Number of sequences better than 10.0: 11 Number of HSP's gapped: 11920 Number of HSP's successfully gapped: 11 Length of query: 369 Length of database: 100,686,439 Length adjustment: 115 Effective length of query: 254 Effective length of database: 69,142,514 Effective search space: 17562198556 Effective search space used: 17562198556 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)