ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf96f20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os07g0444200:Os07g0444200 37 0.065
2AK110646:Os03g0231300 35 0.25
3Os06g0356400:Os06g0356400 33 0.95
4AK072350:Os02g0729300 33 0.95
5Os10g0391300:Os10g0391300 33 1.2
6AK119734: 33 1.2
7AK069301:Os07g0555200 32 2.7
8AK068744:Os07g0555200 32 2.7
9AK059832:Os04g0629000 32 3.6
10AK121255:Os04g0418500 31 4.7
11AK074001:Os08g0542900 31 4.7
12AK071532:Os11g0191800 31 4.7
13AK064378:Os08g0542900 31 4.7
14AK104995:Os02g0823300 31 4.7
15AK099954:Os03g0231400 31 4.7
16AK099915:Os02g0823300 31 4.7
17AK069544:Os02g0823300 31 4.7
18AK101809:Os02g0325600 31 6.1
19AK070420:Os01g0959000 31 6.1
20AK064355:Os02g0325600 31 6.1
21Os05g0426800:Os05g0426800 30 8.0
22AK109628:Os04g0389800 30 8.0
23Os06g0495700:Os06g0495700 30 8.0
24AK106673:Os09g0513800 30 8.0

>Os07g0444200:Os07g0444200 |
          Length = 1316
 Score = 37.4 bits (85), Expect = 0.065
 Identities = 31/124 (25%), Positives = 46/124 (37%), Gaps = 4/124 (3%)
 Frame = +2

Query: 2741 IGPGNISFVAAVKKTMEQQRQHRP----QKRQAPSKKGVQGAPSPPLLFQQQRWHCRL*G 2908
            IG  + SF + + K +  +   +     +KR+    +  Q AP  P       W   +  
Sbjct: 196  IGQDHDSFQSLINKVVRLENDRKVVEHNRKRRLAMNRSPQTAPQRPKGTTSSAWRPTVVT 255

Query: 2909 LPRXXXXXXXXXXXXPGRSSCPSPDPSCATPGSKVQDMICFNCSWRSHYVGNCVEPKKCF 3088
              R            P      +P P+ A  GS V+   CFNC    H+   C  P K  
Sbjct: 256  TSRPAASSNFHR---PVTIQNRAPAPNQAATGS-VRPGSCFNCGEYGHFANKCPHPNKTP 311

Query: 3089 ICSG 3100
            IC+G
Sbjct: 312  ICTG 315



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>AK110646:Os03g0231300 |
          Length = 256

 Score = 35.4 bits (80), Expect = 0.25
 Identities = 39/136 (28%), Positives = 57/136 (41%)
 Frame = -3

Query: 776 RKKHIKHANPTIEAEPQTQLVFMPSWSRKEATTSANHAGKTPPSASLLIVGYYETMPLGV 597
           R+   + A P + ++ +++LV  P    KEA    + A K    AS     +    P   
Sbjct: 11  RRSRAELARPLVVSQARSELVEKP----KEAPRLRSGAVKPRAEASR----WRSRSPGRR 62

Query: 596 QRRDHVKMSPSPDPTYLSSPPKLWPWEREGAQLPKPWPSGEGRRAQLPEDASRKECVAGR 417
             R  V++   P  ++ SSPP L         LP PW S       LP+  SR     GR
Sbjct: 63  LVRTPVQLPQIPISSWSSSPPNL---------LPPPWSSS------LPDQRSRHGRRRGR 107

Query: 416 RWIRLRPERGFLPETS 369
           R  ++R  R  LP +S
Sbjct: 108 RRRQIRRHRCSLPPSS 123



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>Os06g0356400:Os06g0356400 |
          Length = 771

 Score = 33.5 bits (75), Expect = 0.95
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = +2

Query: 2975 SPDPSCATPGSKVQDMICFNCSWRSHYVGNCVEPKKCFICSG 3100
            +P P+ AT GS V+   CFNC    H+   C  P K  I +G
Sbjct: 275  APAPNQATTGS-VRPESCFNCGEYGHFANKCPHPNKTPIRTG 315



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>AK072350:Os02g0729300 |
          Length = 469

 Score = 33.5 bits (75), Expect = 0.95
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +2

Query: 3026 CFNCSWRSHYVGNCVEPKKCFIC--SGIYNVNNC 3121
            CFNC  R H    C +P +CF C  SG +  N+C
Sbjct: 221  CFNCLARDHRAARCRDPVRCFRCFRSG-HKANSC 253



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>Os10g0391300:Os10g0391300 |
          Length = 718

 Score = 33.1 bits (74), Expect = 1.2
 Identities = 28/99 (28%), Positives = 37/99 (37%), Gaps = 18/99 (18%)
 Frame = -3

Query: 2426 KQAKHHLNPSRHHLQKQDRRRHEP----------SSQLGCWTHDHHPNPKPH*QLHQGSF 2277
            K  +H  N S HH  + DR  H+P            Q      +HH N   H Q+ Q  +
Sbjct: 597  KTYQHGSNGSGHHQARVDRETHQPLRSRNQDYHWEDQSYHHQQNHHQNYYGHRQMSQDQY 656

Query: 2276 EEQTSNLHLPQHKR-----SQLHKQGMSAPGP---RPWE 2184
              Q  N H   H R     +Q H +      P   RPW+
Sbjct: 657  HHQ-QNHHQNYHGRQGMNGNQYHDRQNHNQNPQRFRPWK 694



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>AK119734: |
          Length = 1087

 Score = 33.1 bits (74), Expect = 1.2
 Identities = 26/90 (28%), Positives = 44/90 (48%)
 Frame = +2

Query: 2624 SSALGKVATSSGLGKISLLYSRRLLPWSLQPQFQLECEGIGPGNISFVAAVKKTMEQQRQ 2803
            S+AL  +    G G  +LLY+  LL W    Q+Q+E          F +AV   ++  ++
Sbjct: 810  SAALAAMRQLDGQGLSNLLYAVGLLKWQPSRQWQVE----------FWSAVVTQVQLPQR 859

Query: 2804 HRPQKRQAPSKKGVQGAPSPPLLFQQQRWH 2893
            H+ Q++  P ++G +G        QQQ+ H
Sbjct: 860  HKEQRQ--PKQRGRRGRQQQ----QQQQQH 883



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>AK069301:Os07g0555200 |
          Length = 1296

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -1

Query: 2491 VPRFPTHHRSSDERHQRKSKPQSRPNII*IPLDTTCRSRIAAGTNPHRSSDV 2336
            VP+ P H +      Q+K +PQS+P +     D    +  +   NPH  S V
Sbjct: 215  VPQAPKHQQQQQPLQQQKQQPQSQPPLQQTRKDVVSSNHSSKPINPHIPSQV 266



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>AK068744:Os07g0555200 |
          Length = 918

 Score = 32.0 bits (71), Expect = 2.7
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -1

Query: 2491 VPRFPTHHRSSDERHQRKSKPQSRPNII*IPLDTTCRSRIAAGTNPHRSSDV 2336
            VP+ P H +      Q+K +PQS+P +     D    +  +   NPH  S V
Sbjct: 215  VPQAPKHQQQQQPLQQQKQQPQSQPPLQQTRKDVVSSNHSSKPINPHIPSQV 266



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>AK059832:Os04g0629000 |
          Length = 299

 Score = 31.6 bits (70), Expect = 3.6
 Identities = 33/105 (31%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
 Frame = +2

Query: 2567 PFPDRREASRAHLPP--LPKPSSALGKVATSSGLGKISLLYSRRLLPWSLQPQFQLECEG 2740
            P P RR+ +    PP  L      L  VA +SG  ++S  YS RL P+ L  Q       
Sbjct: 8    PPPRRRDGTIYTSPPPNLLLLLLLLLAVAAASGRARVSGRYSDRL-PFDLDRQKLRSFTT 66

Query: 2741 IGPGNISFVAAVKKTMEQQRQ-HRPQKRQAPSKKGVQGAPSPPLL 2872
            +    I+ + A K     Q Q  RP++R APS         P  L
Sbjct: 67   LAAITITLIFAWKLLRAPQEQPRRPRRRVAPSPSNTSSRSRPGAL 111



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>AK121255:Os04g0418500 |
          Length = 451

 Score = 31.2 bits (69), Expect = 4.7
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = +3

Query: 375 LRKKSSFWS*PDPATAGDALF---PGSIFRELCSPSLS*RPWLRKLCSF 512
           LR   S WS   PAT+GDA     P  + R++ SP       LR+L ++
Sbjct: 96  LRSLISHWSSSSPATSGDASVTSSPAGLVRQVASPDADPSAALRQLAAY 144



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>AK074001:Os08g0542900 |
          Length = 427

 Score = 31.2 bits (69), Expect = 4.7
 Identities = 18/55 (32%), Positives = 21/55 (38%)
 Frame = -3

Query: 2450 ASTEE*APKQAKHHLNPSRHHLQKQDRRRHEPSSQLGCWTHDHHPNPKPH*QLHQ 2286
            A+  E  P+ A HH     HH     RR+H          H  H  P  H Q HQ
Sbjct: 31   AAAPEFTPRSAAHH-----HHHHANPRRQHRGGGGGAYHHHQQHYQPHHHHQHHQ 80



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>AK071532:Os11g0191800 |
          Length = 229

 Score = 31.2 bits (69), Expect = 4.7
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -3

Query: 746 TIEAEPQTQLVFMPSWSRKEATTSANHAGKTPPSASLL 633
           T  A+P+    F P W R EA T+     KTPP   LL
Sbjct: 92  TTAADPKISAPFFPQWKRDEAMTT-----KTPPGKCLL 124



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>AK064378:Os08g0542900 |
          Length = 427

 Score = 31.2 bits (69), Expect = 4.7
 Identities = 18/55 (32%), Positives = 21/55 (38%)
 Frame = -3

Query: 2450 ASTEE*APKQAKHHLNPSRHHLQKQDRRRHEPSSQLGCWTHDHHPNPKPH*QLHQ 2286
            A+  E  P+ A HH     HH     RR+H          H  H  P  H Q HQ
Sbjct: 31   AAAPEFTPRSAAHH-----HHHHANPRRQHRGGGGGAYHHHQQHYQPHHHHQHHQ 80



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>AK104995:Os02g0823300 |
          Length = 417

 Score = 31.2 bits (69), Expect = 4.7
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
 Frame = +2

Query: 2738 GIGPGNISFVAAV------KKTMEQQRQHRPQKRQAPSKKGVQGAPSPPLLFQQQRWHCR 2899
            G GP N +  AA+       +  EQ+R    ++ QAP  +     P PPL  +Q  WH  
Sbjct: 219  GRGPLNWNLDAAIPSVNSPNENQEQERNAETRQFQAPVNRPALVIPPPPLPPRQPLWHRE 278

Query: 2900 L 2902
            L
Sbjct: 279  L 279



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>AK099954:Os03g0231400 |
          Length = 230

 Score = 31.2 bits (69), Expect = 4.7
 Identities = 20/57 (35%), Positives = 25/57 (43%)
 Frame = +1

Query: 406 RIQRRPATHSFLEASSGSCALLPSPDGHGFGSCAPSLSHGHSFGGELRYVGSGEGDI 576
           RI RR A        + +  LLPSP       C+P LS   S  G     GSG G++
Sbjct: 49  RIWRRGARRLLPSPPARARRLLPSPLERELAGCSPPLSGTSSAAGSSGGAGSGGGEL 105



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>AK099915:Os02g0823300 |
          Length = 754

 Score = 31.2 bits (69), Expect = 4.7
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
 Frame = +2

Query: 2738 GIGPGNISFVAAV------KKTMEQQRQHRPQKRQAPSKKGVQGAPSPPLLFQQQRWHCR 2899
            G GP N +  AA+       +  EQ+R    ++ QAP  +     P PPL  +Q  WH  
Sbjct: 556  GRGPLNWNLDAAIPSVNSPNENQEQERNAETRQFQAPVNRPALVIPPPPLPPRQPLWHRE 615

Query: 2900 L 2902
            L
Sbjct: 616  L 616



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>AK069544:Os02g0823300 |
          Length = 754

 Score = 31.2 bits (69), Expect = 4.7
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
 Frame = +2

Query: 2738 GIGPGNISFVAAV------KKTMEQQRQHRPQKRQAPSKKGVQGAPSPPLLFQQQRWHCR 2899
            G GP N +  AA+       +  EQ+R    ++ QAP  +     P PPL  +Q  WH  
Sbjct: 556  GRGPLNWNLDAAIPSVNSPNENQEQERNAETRQFQAPVNRPALVIPPPPLPPRQPLWHRE 615

Query: 2900 L 2902
            L
Sbjct: 616  L 616



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>AK101809:Os02g0325600 |
          Length = 412

 Score = 30.8 bits (68), Expect = 6.1
 Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 3/101 (2%)
 Frame = -3

Query: 734 EPQTQLVFMPSWSRKEATTSANHAGKTPP--SASLLIVGYYETMPLGVQRRDHVKMSPSP 561
           E  T      S  ++EA TS  H+   PP   A  +   + +++ L  Q       SPSP
Sbjct: 89  EESTHADAAKSGKKEEAETSERHSSPPPPPPEAKKVTPDWLQSVQLWSQEEPQQPSSPSP 148

Query: 560 DPTY-LSSPPKLWPWEREGAQLPKPWPSGEGRRAQLPEDAS 441
            PT  L   P      + G       P  + +RA+LP  ++
Sbjct: 149 TPTKDLPCKPVALNARKAGGAFQ---PFEKEKRAELPASST 186



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>AK070420:Os01g0959000 |
          Length = 432

 Score = 30.8 bits (68), Expect = 6.1
 Identities = 33/129 (25%), Positives = 46/129 (35%), Gaps = 3/129 (2%)
 Frame = -3

Query: 791 QQHKPRKKHIKHANPTIEAEPQTQLVFMPSWSRKEATTSANHAGKTPP---SASLLIVGY 621
           QQ +      K A+P  +  P  + +  P   R++   S      +PP    A    V  
Sbjct: 220 QQRREPSPRRKPASPPRKRTPPNRRIESP---RRQPDPSPRRRPDSPPIRRRADASPVRR 276

Query: 620 YETMPLGVQRRDHVKMSPSPDPTYLSSPPKLWPWEREGAQLPKPWPSGEGRRAQLPEDAS 441
            +T P         + SPSP P    SP +  P    G+  P+    G  RR   P    
Sbjct: 277 GDTPPRRRPGSPVRRRSPSPPPRRRRSPMRPSPRRLRGSPSPRRRSPGPIRRRSPPPPPR 336

Query: 440 RKECVAGRR 414
           R     GRR
Sbjct: 337 RPRSPPGRR 345



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>AK064355:Os02g0325600 |
          Length = 412

 Score = 30.8 bits (68), Expect = 6.1
 Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 3/101 (2%)
 Frame = -3

Query: 734 EPQTQLVFMPSWSRKEATTSANHAGKTPP--SASLLIVGYYETMPLGVQRRDHVKMSPSP 561
           E  T      S  ++EA TS  H+   PP   A  +   + +++ L  Q       SPSP
Sbjct: 89  EESTHADAAKSGKKEEAETSERHSSPPPPPPEAKKVTPDWLQSVQLWSQEEPQQPSSPSP 148

Query: 560 DPTY-LSSPPKLWPWEREGAQLPKPWPSGEGRRAQLPEDAS 441
            PT  L   P      + G       P  + +RA+LP  ++
Sbjct: 149 TPTKDLPCKPVALNARKAGGAFQ---PFEKEKRAELPASST 186



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>Os05g0426800:Os05g0426800 |
          Length = 190

 Score = 30.4 bits (67), Expect = 8.0
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -3

Query: 557 PTYLSSPPKLWPWEREGAQLPKPWPSGEGRRAQLP 453
           PT+L+ P  L PW REG +    WP    R   +P
Sbjct: 159 PTFLAQPAPLLPWPREGVR----WPPHGHRHCFVP 189



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>AK109628:Os04g0389800 |
          Length = 639

 Score = 30.4 bits (67), Expect = 8.0
 Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
 Frame = -3

Query: 2432 APKQAKHHLNPSRHHLQKQDRRRH---EPSSQ---LGCWTHDHH------PNPKPH*QLH 2289
            A  + + HL P RH  + + RRR     P+ +    G   HD H       + + H   H
Sbjct: 130  AAGRLRRHLRPGRHQPRVRARRRPPRLRPARRHHGAGPAPHDRHRRVPGDAHRRVHPLHH 189

Query: 2288 QGSFEEQTSNLHLPQHKRSQLHK-QGMSAPGPR 2193
            Q          H P+H+R  L +  G   PG R
Sbjct: 190  QAQLPNPRRRRHPPRHQRGLLPRVHGSPRPGAR 222



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>Os06g0495700:Os06g0495700 |
          Length = 646

 Score = 30.4 bits (67), Expect = 8.0
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +2

Query: 2966 SCPSPDPSCATPGSKVQDMICFNCSWRSHYVGNCVEPK 3079
            S P  DPS     +   D  CFNC   SH +  C +P+
Sbjct: 364  STPLGDPSNTESRADKDDSRCFNCGSYSHALKECPKPR 401



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>AK106673:Os09g0513800 |
          Length = 544

 Score = 30.4 bits (67), Expect = 8.0
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
 Frame = +2

Query: 2969 CPSPDPSCATP---------GSKVQDMICFNCSWRSHYVGNCVEPKKCFICSGI--YNVN 3115
            CP+PD +CA             K +   C+NC+  +H   +C    K  + +     N+N
Sbjct: 179  CPAPDCTCAVEFLGDGNYDVSCKCKFSFCWNCAEEAHRPVSCDTVSKWILKNSAESENMN 238

Query: 3116 NCIAWARLIPKKKK 3157
              +A+++  PK K+
Sbjct: 239  WILAYSKPCPKCKR 252


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 88,309,664
Number of extensions: 2170599
Number of successful extensions: 8571
Number of sequences better than 10.0: 24
Number of HSP's gapped: 8549
Number of HSP's successfully gapped: 24
Length of query: 1053
Length of database: 15,399,855
Length adjustment: 111
Effective length of query: 942
Effective length of database: 10,955,304
Effective search space: 10319896368
Effective search space used: 10319896368
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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