>Q24573:DRI_DROME Protein dead ringer - Drosophila melanogaster (Fruit fly)|
          Length = 911
 Score = 37.4 bits (85), Expect = 0.39
 Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
 Frame = -3

Query: 2423 QAKHHLNPSRHHLQKQDRRRHEP-SSQLGCWTHDHHPNPKPH*QLHQGSFEEQTSNLHLP 2247
            Q +HHL   R   Q  D  +HE  S+Q+  W H +H N  P    H    + +  NL   
Sbjct: 536  QQQHHLQQQRQRSQSPDLSKHEALSAQVALW-HMYHNNNSPPGSAHTSPQQREALNLSDS 594

Query: 2246 QHKRSQLHKQGMSAPGPRP 2190
                + + ++    P P P
Sbjct: 595  PPNLTNIKREREREPTPEP 613

>Q9Z1C8:RPGF3_RAT Rap guanine nucleotide exchange factor 3 - Rattus norvegicus (Rat)|
          Length = 884

 Score = 34.3 bits (77), Expect = 3.3
 Identities = 22/77 (28%), Positives = 35/77 (45%)
 Frame = -3

Query: 812 RMANIF*QQHKPRKKHIKHANPTIEAEPQTQLVFMPSWSRKEATTSANHAGKTPPSASLL 633
           R++N+  +Q+  R++H +  N      PQT+    P W         NH    P SA  +
Sbjct: 463 RLSNLLREQYPERRRHHRLENGCGNVSPQTKARNAPVW-------FPNHEEPLPSSAGAI 515

Query: 632 IVGYYETMPLGVQRRDH 582
            VG  + +P  + R DH
Sbjct: 516 RVG--DKVPYDICRPDH 530

>Q3B7L6:SFRS6_BOVIN Splicing factor, arginine/serine-rich 6 - Bos taurus (Bovine)|
          Length = 345

 Score = 33.5 bits (75), Expect = 5.7
 Identities = 46/184 (25%), Positives = 70/184 (38%), Gaps = 3/184 (1%)
 Frame = -2

Query: 738 GRASNPTRLYAIMVKKRSHHLSKPRGQDAAIRQPLNRRLLRDDAPRSTKT*SREDVSLA* 559
           G   N   +  I  K R+ H     G  +  R   +RR  R  + RS+++ SR       
Sbjct: 168 GTEINGRNIRLIEDKPRTSHRRSYSGSRSRSR---SRRRSRSRSRRSSRSRSR------- 217

Query: 558 SNISKFPSEAMAMGEGRSTTSEAMAVRRGKESTAP--GRCFQERVRRRPSLDPAKTRKRI 385
            +ISK  S + +  +GRS +       R K  + P   R  + R R R   +  K+R R 
Sbjct: 218 -SISKSRSRSRSRSKGRSRSRSKGRKSRSKSKSKPKSDRGSRSRSRSRSKDEYEKSRSRS 276

Query: 384 SSGDEHEPANHKPPA*QPLHSHSQDHI-TPTTAPAEDNGRRAAGIWTRPKSSKLYFARRK 208
            S       N K        S SQ    +P  AP      +A  +   PK +    +R +
Sbjct: 277 RSRSRSPKENGKGDIKSKSRSRSQSRSDSPLPAPPS----KARSVSPPPKRASRSHSRSR 332

Query: 207 RKEK 196
            K +
Sbjct: 333 SKSR 336

>Q38831:IAA13_ARATH Auxin-responsive protein IAA13 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 247

 Score = 33.1 bits (74), Expect = 7.4
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -3

Query: 707 PSWSRKEATTSANHAGKTPPSASLLIVGYYETMPLGVQR 591
           PS   K A  SA+HAG +PP +S  +VG+    P+G  R
Sbjct: 52  PSVGSKRAADSASHAGSSPPRSSSQVVGW---PPIGSHR 87

>P36417:GBF_DICDI G-box-binding factor - Dictyostelium discoideum (Slime mold)|
          Length = 708

 Score = 33.1 bits (74), Expect = 7.4
 Identities = 17/72 (23%), Positives = 28/72 (38%), Gaps = 3/72 (4%)
 Frame = -3

Query: 2426 KQAKHHLN---PSRHHLQKQDRRRHEPSSQLGCWTHDHHPNPKPH*QLHQGSFEEQTSNL 2256
            +Q +HH       +HH Q Q ++ H+         H H    +   Q HQ    +Q    
Sbjct: 154  QQQQHHQQMQQQQQHHQQMQQQQHHQQMQHHQLQQHQHQHQQQQQQQQHQQQHHQQQQQQ 213

Query: 2255 HLPQHKRSQLHK 2220
                H++ Q H+
Sbjct: 214  QQQHHQQQQHHQ 225

>Q5ZJ69:ARI5B_CHICK AT-rich interactive domain-containing protein 5B - Gallus gallus|
            (Chicken)
          Length = 1185

 Score = 33.1 bits (74), Expect = 7.4
 Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 10/87 (11%)
 Frame = -3

Query: 2426 KQAKHHLNPSR--HHLQKQDRRRHEPSSQLGCWTHDHHPNPKPH*QLHQ--------GSF 2277
            +  +HHLN  +   +L +   R  E  S      H    N   H  LHQ         S 
Sbjct: 836  RHTEHHLNNEQTSKYLPRDMFRESENISTFTQHKHQEKLNLNYHPSLHQQEKKATVEASS 895

Query: 2276 EEQTSNLHLPQHKRSQLHKQGMSAPGP 2196
            ++Q ++L LP+     +HKQ   APGP
Sbjct: 896  DDQPTDLSLPK----SIHKQTAKAPGP 918

>Q9UQ35:SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 - Homo sapiens (Human)|
          Length = 2752

 Score = 33.1 bits (74), Expect = 7.4
 Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
 Frame = -1

Query: 496 RSHGRQEREGEHS---SRKMLPGKSASPAVAGSG*DQKEDFFRRRARTGQPQTAGLTTTA 326
           RSHGR +R+  HS   SR+M  G+S SPA A  G          R+R+  P   G + + 
Sbjct: 462 RSHGRAKRDKSHSHTPSRRM--GRSRSPATAKRG----------RSRSRTPTKRGHSRSR 509

Query: 325 QPQ 317
            PQ
Sbjct: 510 SPQ 512

>Q7RY59:RRP3_NEUCR ATP-dependent rRNA helicase rrp-3 - Neurospora crassa|
          Length = 515

 Score = 33.1 bits (74), Expect = 7.4
 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
 Frame = -2

Query: 510 RSTTSEAMAVRRGKESTAPGRCFQERVRRRPSLDPA---KTRKRISSGDEHEPANHKPPA 340
           R T+ E  A+++    +AP    +++V+ + + D +   KT K     D  EPA    PA
Sbjct: 6   RKTSDEPSALKKAAAPSAPELKKEKKVKDKSTKDKSSTKKTEKTEKKQDAPEPAEESTPA 65

Query: 339 *QPLHSHSQDHITPTTAPAED 277
               +S  +D +T   AP ++
Sbjct: 66  ---TNSTEEDSVTLDVAPEQE 83

>Q9HB75:PIDD_HUMAN Leucine-rich repeat and death domain-containing protein - Homo|
            sapiens (Human)
          Length = 910

 Score = 33.1 bits (74), Expect = 7.4
 Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
 Frame = +2

Query: 2183 FPTGVDLEHSFPVCAVESVCVEEDGDLRFVPQRILDVAVSEVLDSDDGRVSNIRAAMRVR 2362
            F  G+D++   P C    +C      L+ V +  +   +     +  G+VS  R A+ VR
Sbjct: 672  FERGIDVDADRPDCVEGRICFVFYSHLKNVKEVYVTTTLDREAQAVRGQVSFYRGAVPVR 731

Query: 2363 AGGDPASAGGVERDSNDVWPALGLTLPL-MPFIRGS 2467
               + A A    + ++ +W A   TLP+ +P +RGS
Sbjct: 732  V-PEEAEAARQRKGADALWMA---TLPIKLPRLRGS 763

>P52172:SRP_DROME Box A-binding factor - Drosophila melanogaster (Fruit fly)|
          Length = 1264

 Score = 32.7 bits (73), Expect = 9.7
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = -3

Query: 2450 ASTEE*APKQAKHHLNPSRHHLQKQDRRRHEPSSQLGCWTHDHHPN 2313
            A T E   +Q  HH     HH Q+Q +  H+   Q     H HH N
Sbjct: 400  ALTHEQLHQQQHHHQQQLHHHQQQQQQLYHQQQQQQQQQQHHHHHN 445

>Q8N3Z6:ZCHC7_HUMAN Zinc finger CCHC domain-containing protein 7 - Homo sapiens (Human)|
          Length = 542

 Score = 32.7 bits (73), Expect = 9.7
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
 Frame = +2

Query: 3014 QDMICFNCSWRSHYVGNCVEPKK---CFICS 3097
            +++IC NC  R H   NC  P+K   CF+CS
Sbjct: 238  KNIICRNCDKRGHLSKNCPLPRKVRRCFLCS 268

>Q5ZUJ9:SYA_LEGPH Alanyl-tRNA synthetase - Legionella pneumophila subsp. pneumophila|
            (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
          Length = 860

 Score = 32.7 bits (73), Expect = 9.7
 Identities = 20/59 (33%), Positives = 28/59 (47%)
 Frame = +2

Query: 2498 ASSRPGDRDEEEVAEFYDQLWVIPFPDRREASRAHLPPLPKPSSALGKVATSSGLGKIS 2674
            A   PG  DE+   + Y ++W + F         HL PLPKPS     V T  GL +++
Sbjct: 183  AGGPPGSPDED--GDRYIEIWNLVFMQFNRDREGHLHPLPKPS-----VDTGMGLERLA 234

>Q803L0:LN28A_DANRE Lin-28 homolog A - Danio rerio (Zebrafish) (Brachydanio rerio)|
          Length = 202

 Score = 32.7 bits (73), Expect = 9.7
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
 Frame = +2

Query: 3026 CFNCSWRSHYVGNC---VEPKKCFICSGI-YNVNNC 3121
            CFNC   +H+   C    +PKKC  C  I + V NC
Sbjct: 131  CFNCGGPNHHAKECQLPPQPKKCHFCQSISHMVANC 166


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 528,008,098
Number of extensions: 11899414
Number of successful extensions: 36829
Number of sequences better than 10.0: 14
Number of HSP's gapped: 36681
Number of HSP's successfully gapped: 15
Length of query: 1053
Length of database: 100,686,439
Length adjustment: 124
Effective length of query: 929
Effective length of database: 66,673,859
Effective search space: 61940015011
Effective search space used: 61940015011
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)