ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf98j19 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001068998.1| Oryza sativa (japonica cultivar-group) Os08g0554000 (Os08g0554000) mRNA, complete cds Length = 1742 Score = 1181 bits (596), Expect = 0.0 Identities = 950/1068 (88%) Strand = Plus / Plus Query: 134 gagcgagaatgcagggtggatccagcggcatcgtctacggcggcctcaagtaccaggcgc 193 |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 74 gagcgagaatgcagggcggatctagcggcatcgtctacggcggcctcaagtaccaggcgc 133 Query: 194 ggtgcatcaccgacgtgcgcgcagacgccggttccaccaccttcctcgccggaaccctca 253 |||||||| ||||||||||||| | |||||| || ||||||||||||||||||||||||| Sbjct: 134 ggtgcatcgccgacgtgcgcgcggccgccgggtcgaccaccttcctcgccggaaccctca 193 Query: 254 gcctcaaggaggagaacgaggtgcacctgatccggctgctgccgggggagaacgagctcg 313 | ||||||||||||||||||||||||||||||||| | |||| ||||| |||||| | Sbjct: 194 gtctcaaggaggagaacgaggtgcacctgatccggttttcaccggcggagagcgagctgg 253 Query: 314 tgtgcgacgggctgttctaccatcccaacgagatctgggacctcaagtcctgccccttcg 373 ||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||| Sbjct: 254 tgtgcgacgggctgttctaccatccaaacgagatctgggaccttaagtcttgccccttcg 313 Query: 374 accacaggttattctccacggtctacacctctggtgagggttatggcgcgtcagtttgga 433 | || ||| | |||||||| |||||||| ||||| ||||| ||||| || || ||||||| Sbjct: 314 atcatagggtcttctccacagtctacacgtctggcgagggctatggtgcatctgtttgga 373 Query: 434 agatcccggagctgtatgggcagtccaactcaccgcagcttgagcagcttttcgcgctcg 493 |||||||||||||| | |||||||| || || |||| ||||||||||||||| |||| | Sbjct: 374 agatcccggagctgcacgggcagtcgaattcgccgccacttgagcagcttttcacgcttg 433 Query: 494 atgaccacacggacaaaataagatgtgttctctggtggccactggggaagcatgataagt 553 |||| ||||||| |||||||||||||||||||||||||||||| |||||||| || |||| Sbjct: 434 atgagcacacgggcaaaataagatgtgttctctggtggccactagggaagcacgacaagt 493 Query: 554 taattagcatcgatgacagaaacatttttctctggaacatagatccatcaaataaatcag 613 ||||||| || ||||||||||| ||||| |||||||| |||||| |||||||||| |||| Sbjct: 494 taattagtattgatgacagaaatattttcctctggaatatagatgcatcaaataagtcag 553 Query: 614 ccaaggtgatatcacagggatctgctgacatgcttcccaatttacgtggtggagcttggg 673 |||||||||| | |||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 554 ccaaggtgatgcaaaaggggtctgctgacatgcttcccaatttacgtggtggatcttggg 613 Query: 674 atccacacaatcacaacgcagttgctacaataactgattcgtcactccacttctgggatc 733 |||||||| ||||||| || ||||| |||| |||||||| ||||| |||| |||||||| Sbjct: 614 atccacacgatcacaattcaattgctgcaattactgattcctcacttcactgctgggatc 673 Query: 734 tccgttctatgaagagatcaaatgcaattgaacatgctcatatccgggatgtggattata 793 ||||||||||||||| ||||||||||||||| ||||| ||| | |||||||||||||||| Sbjct: 674 tccgttctatgaagaaatcaaatgcaattgagcatgcgcattttcgggatgtggattata 733 Query: 794 accccaagaagcaaaacataattgcaacagcagaggacgaatttggaattcgtttgtggg 853 |||||||||| || || ||||| |||||||||| || |||||||| || |||||||||| Sbjct: 734 accccaagaaacagcacttaattacaacagcagaagatgaatttggtatccgtttgtggg 793 Query: 854 atctcagaatgcttaagcatcctctgaaggatctccctggacattcacattggacatggg 913 ||||||||||||||||| ||||||||||| |||||||||| ||||| ||||||||||||| Sbjct: 794 atctcagaatgcttaagtatcctctgaagaatctccctgggcattcgcattggacatggg 853 Query: 914 ctgttcggcacaatcctgagtatgatgagctgattctgagtgctggaacggattcagctg 973 |||||||||||||||||||| |||| || ||||||||||||||||||| |||||| ||| Sbjct: 854 ctgttcggcacaatcctgagcatgaccagttgattctgagtgctggaacagattcaactg 913 Query: 974 tcaatttatggttggctaaagttggcagtgatgactctggacccgaaagcccttctggtt 1033 ||||||| ||||| ||||||||||||| ||||||||| ||||| ||||| ||| |||||| Sbjct: 914 tcaatttgtggtttgctaaagttggcactgatgactcaggacctgaaagtcctcctggtt 973 Query: 1034 cacccactaggcaagaagaaccattactgaactcgtatactgactacgaagatagcatct 1093 ||||||| || |||||||||||||||| || || || ||||| || ||||||||||| | Sbjct: 974 cacccacaagagaagaagaaccattactaaattcatacactgattatgaagatagcatat 1033 Query: 1094 atggaattgcatggagctcccatgatccatcgttgtttgcttctttgtcttatgatggaa 1153 | || ||||||||||||||||||||||| || || ||||||||||| |||||||| |||| Sbjct: 1034 acggtattgcatggagctcccatgatccgtcattatttgcttctttatcttatgacggaa 1093 Query: 1154 gggttgttttagaatctgtgaagccccacctgcagagaaaatgaagct 1201 |||||||||||||||| || |||||| || |||||||||||||||||| Sbjct: 1094 gggttgttttagaatcagtcaagccctacttgcagagaaaatgaagct 1141 Score = 60.0 bits (30), Expect = 3e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1233 gcaggcttgtttgttgtgcatataattggtgttgtaga 1270 |||| |||||||||||||||||| |||||||||||||| Sbjct: 1257 gcagacttgtttgttgtgcatattattggtgttgtaga 1294
>dbj|AK111661.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153B06, full insert sequence Length = 1743 Score = 1181 bits (596), Expect = 0.0 Identities = 950/1068 (88%) Strand = Plus / Plus Query: 134 gagcgagaatgcagggtggatccagcggcatcgtctacggcggcctcaagtaccaggcgc 193 |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75 gagcgagaatgcagggcggatctagcggcatcgtctacggcggcctcaagtaccaggcgc 134 Query: 194 ggtgcatcaccgacgtgcgcgcagacgccggttccaccaccttcctcgccggaaccctca 253 |||||||| ||||||||||||| | |||||| || ||||||||||||||||||||||||| Sbjct: 135 ggtgcatcgccgacgtgcgcgcggccgccgggtcgaccaccttcctcgccggaaccctca 194 Query: 254 gcctcaaggaggagaacgaggtgcacctgatccggctgctgccgggggagaacgagctcg 313 | ||||||||||||||||||||||||||||||||| | |||| ||||| |||||| | Sbjct: 195 gtctcaaggaggagaacgaggtgcacctgatccggttttcaccggcggagagcgagctgg 254 Query: 314 tgtgcgacgggctgttctaccatcccaacgagatctgggacctcaagtcctgccccttcg 373 ||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||| Sbjct: 255 tgtgcgacgggctgttctaccatccaaacgagatctgggaccttaagtcttgccccttcg 314 Query: 374 accacaggttattctccacggtctacacctctggtgagggttatggcgcgtcagtttgga 433 | || ||| | |||||||| |||||||| ||||| ||||| ||||| || || ||||||| Sbjct: 315 atcatagggtcttctccacagtctacacgtctggcgagggctatggtgcatctgtttgga 374 Query: 434 agatcccggagctgtatgggcagtccaactcaccgcagcttgagcagcttttcgcgctcg 493 |||||||||||||| | |||||||| || || |||| ||||||||||||||| |||| | Sbjct: 375 agatcccggagctgcacgggcagtcgaattcgccgccacttgagcagcttttcacgcttg 434 Query: 494 atgaccacacggacaaaataagatgtgttctctggtggccactggggaagcatgataagt 553 |||| ||||||| |||||||||||||||||||||||||||||| |||||||| || |||| Sbjct: 435 atgagcacacgggcaaaataagatgtgttctctggtggccactagggaagcacgacaagt 494 Query: 554 taattagcatcgatgacagaaacatttttctctggaacatagatccatcaaataaatcag 613 ||||||| || ||||||||||| ||||| |||||||| |||||| |||||||||| |||| Sbjct: 495 taattagtattgatgacagaaatattttcctctggaatatagatgcatcaaataagtcag 554 Query: 614 ccaaggtgatatcacagggatctgctgacatgcttcccaatttacgtggtggagcttggg 673 |||||||||| | |||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 555 ccaaggtgatgcaaaaggggtctgctgacatgcttcccaatttacgtggtggatcttggg 614 Query: 674 atccacacaatcacaacgcagttgctacaataactgattcgtcactccacttctgggatc 733 |||||||| ||||||| || ||||| |||| |||||||| ||||| |||| |||||||| Sbjct: 615 atccacacgatcacaattcaattgctgcaattactgattcctcacttcactgctgggatc 674 Query: 734 tccgttctatgaagagatcaaatgcaattgaacatgctcatatccgggatgtggattata 793 ||||||||||||||| ||||||||||||||| ||||| ||| | |||||||||||||||| Sbjct: 675 tccgttctatgaagaaatcaaatgcaattgagcatgcgcattttcgggatgtggattata 734 Query: 794 accccaagaagcaaaacataattgcaacagcagaggacgaatttggaattcgtttgtggg 853 |||||||||| || || ||||| |||||||||| || |||||||| || |||||||||| Sbjct: 735 accccaagaaacagcacttaattacaacagcagaagatgaatttggtatccgtttgtggg 794 Query: 854 atctcagaatgcttaagcatcctctgaaggatctccctggacattcacattggacatggg 913 ||||||||||||||||| ||||||||||| |||||||||| ||||| ||||||||||||| Sbjct: 795 atctcagaatgcttaagtatcctctgaagaatctccctgggcattcgcattggacatggg 854 Query: 914 ctgttcggcacaatcctgagtatgatgagctgattctgagtgctggaacggattcagctg 973 |||||||||||||||||||| |||| || ||||||||||||||||||| |||||| ||| Sbjct: 855 ctgttcggcacaatcctgagcatgaccagttgattctgagtgctggaacagattcaactg 914 Query: 974 tcaatttatggttggctaaagttggcagtgatgactctggacccgaaagcccttctggtt 1033 ||||||| ||||| ||||||||||||| ||||||||| ||||| ||||| ||| |||||| Sbjct: 915 tcaatttgtggtttgctaaagttggcactgatgactcaggacctgaaagtcctcctggtt 974 Query: 1034 cacccactaggcaagaagaaccattactgaactcgtatactgactacgaagatagcatct 1093 ||||||| || |||||||||||||||| || || || ||||| || ||||||||||| | Sbjct: 975 cacccacaagagaagaagaaccattactaaattcatacactgattatgaagatagcatat 1034 Query: 1094 atggaattgcatggagctcccatgatccatcgttgtttgcttctttgtcttatgatggaa 1153 | || ||||||||||||||||||||||| || || ||||||||||| |||||||| |||| Sbjct: 1035 acggtattgcatggagctcccatgatccgtcattatttgcttctttatcttatgacggaa 1094 Query: 1154 gggttgttttagaatctgtgaagccccacctgcagagaaaatgaagct 1201 |||||||||||||||| || |||||| || |||||||||||||||||| Sbjct: 1095 gggttgttttagaatcagtcaagccctacttgcagagaaaatgaagct 1142 Score = 60.0 bits (30), Expect = 3e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1233 gcaggcttgtttgttgtgcatataattggtgttgtaga 1270 |||| |||||||||||||||||| |||||||||||||| Sbjct: 1258 gcagacttgtttgttgtgcatattattggtgttgtaga 1295
>dbj|AK112044.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C03, full insert sequence Length = 1518 Score = 1059 bits (534), Expect = 0.0 Identities = 852/958 (88%) Strand = Plus / Plus Query: 134 gagcgagaatgcagggtggatccagcggcatcgtctacggcggcctcaagtaccaggcgc 193 |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 74 gagcgagaatgcagggcggatctagcggcatcgtctacggcggcctcaagtaccaggcgc 133 Query: 194 ggtgcatcaccgacgtgcgcgcagacgccggttccaccaccttcctcgccggaaccctca 253 |||||||| ||||||||||||| | |||||| || ||||||||||||||||||||||||| Sbjct: 134 ggtgcatcgccgacgtgcgcgcggccgccgggtcgaccaccttcctcgccggaaccctca 193 Query: 254 gcctcaaggaggagaacgaggtgcacctgatccggctgctgccgggggagaacgagctcg 313 | ||||||||||||||||||||||||||||||||| | |||| ||||| |||||| | Sbjct: 194 gtctcaaggaggagaacgaggtgcacctgatccggttttcaccggcggagagcgagctgg 253 Query: 314 tgtgcgacgggctgttctaccatcccaacgagatctgggacctcaagtcctgccccttcg 373 ||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||| Sbjct: 254 tgtgcgacgggctgttctaccatccaaacgagatctgggaccttaagtcttgccccttcg 313 Query: 374 accacaggttattctccacggtctacacctctggtgagggttatggcgcgtcagtttgga 433 | || ||| | |||||||| |||||||| ||||| ||||| ||||| || || ||||||| Sbjct: 314 atcatagggtcttctccacagtctacacgtctggcgagggctatggtgcatctgtttgga 373 Query: 434 agatcccggagctgtatgggcagtccaactcaccgcagcttgagcagcttttcgcgctcg 493 |||||||||||||| | |||||||| || || |||| ||||||||||||||| |||| | Sbjct: 374 agatcccggagctgcacgggcagtcgaattcgccgccacttgagcagcttttcacgcttg 433 Query: 494 atgaccacacggacaaaataagatgtgttctctggtggccactggggaagcatgataagt 553 |||| ||||||| |||||||||||||||||||||||||||||| |||||||| || |||| Sbjct: 434 atgagcacacgggcaaaataagatgtgttctctggtggccactagggaagcacgacaagt 493 Query: 554 taattagcatcgatgacagaaacatttttctctggaacatagatccatcaaataaatcag 613 ||||||| || ||||||||||| ||||| |||||||| |||||| |||||||||| |||| Sbjct: 494 taattagtattgatgacagaaatattttcctctggaatatagatgcatcaaataagtcag 553 Query: 614 ccaaggtgatatcacagggatctgctgacatgcttcccaatttacgtggtggagcttggg 673 |||||||||| | |||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 554 ccaaggtgatgcaaaaggggtctgctgacatgcttcccaatttacgtggtggatcttggg 613 Query: 674 atccacacaatcacaacgcagttgctacaataactgattcgtcactccacttctgggatc 733 |||||||| ||||||| || ||||| |||| |||||||| ||||| |||| |||||||| Sbjct: 614 atccacacgatcacaattcaattgctgcaattactgattcctcacttcactgctgggatc 673 Query: 734 tccgttctatgaagagatcaaatgcaattgaacatgctcatatccgggatgtggattata 793 ||||||||||||||| ||||||||||||||| ||||| ||| | |||||||||||||||| Sbjct: 674 tccgttctatgaagaaatcaaatgcaattgagcatgcgcattttcgggatgtggattata 733 Query: 794 accccaagaagcaaaacataattgcaacagcagaggacgaatttggaattcgtttgtggg 853 |||||||||| || || ||||| |||||||||| || |||||||| || |||||||||| Sbjct: 734 accccaagaaacagcacttaattacaacagcagaagatgaatttggtatccgtttgtggg 793 Query: 854 atctcagaatgcttaagcatcctctgaaggatctccctggacattcacattggacatggg 913 ||||||||||||||||| ||||||||||| |||||||||| ||||| ||||||||||||| Sbjct: 794 atctcagaatgcttaagtatcctctgaagaatctccctgggcattcgcattggacatggg 853 Query: 914 ctgttcggcacaatcctgagtatgatgagctgattctgagtgctggaacggattcagctg 973 |||||||||||||||||||| |||| || ||||||||||||||||||| |||||| ||| Sbjct: 854 ctgttcggcacaatcctgagcatgaccagttgattctgagtgctggaacagattcaactg 913 Query: 974 tcaatttatggttggctaaagttggcagtgatgactctggacccgaaagcccttctggtt 1033 ||||||| ||||| ||||||||||||| ||||||||| ||||| ||||| ||| |||||| Sbjct: 914 tcaatttgtggtttgctaaagttggcactgatgactcaggacctgaaagtcctcctggtt 973 Query: 1034 cacccactaggcaagaagaaccattactgaactcgtatactgactacgaagatagcat 1091 ||||||| || |||||||||||||||| || || || ||||| || ||||||||||| Sbjct: 974 cacccacaagagaagaagaaccattactaaattcatacactgattatgaagatagcat 1031
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 149 bits (75), Expect = 4e-32 Identities = 108/119 (90%) Strand = Plus / Plus Query: 629 agggatctgctgacatgcttcccaatttacgtggtggagcttgggatccacacaatcaca 688 |||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 27697820 aggggtctgctgacatgcttcccaatttacgtggtggatcttgggatccacacgatcaca 27697879 Query: 689 acgcagttgctacaataactgattcgtcactccacttctgggatctccgttctatgaag 747 | || ||||| |||| |||||||| ||||| |||| |||||||||||||||||||||| Sbjct: 27697880 attcaattgctgcaattactgattcctcacttcactgctgggatctccgttctatgaag 27697938 Score = 137 bits (69), Expect = 1e-28 Identities = 120/137 (87%) Strand = Plus / Plus Query: 272 aggtgcacctgatccggctgctgccgggggagaacgagctcgtgtgcgacgggctgttct 331 ||||||||||||||||| | |||| ||||| |||||| ||||||||||||||||||| Sbjct: 27696597 aggtgcacctgatccggttttcaccggcggagagcgagctggtgtgcgacgggctgttct 27696656 Query: 332 accatcccaacgagatctgggacctcaagtcctgccccttcgaccacaggttattctcca 391 ||||||| ||||||||||||||||| ||||| ||||||||||| || ||| | ||||||| Sbjct: 27696657 accatccaaacgagatctgggaccttaagtcttgccccttcgatcatagggtcttctcca 27696716 Query: 392 cggtctacacctctggt 408 | |||||||| |||||| Sbjct: 27696717 cagtctacacgtctggt 27696733 Score = 133 bits (67), Expect = 2e-27 Identities = 85/91 (93%) Strand = Plus / Plus Query: 187 caggcgcggtgcatcaccgacgtgcgcgcagacgccggttccaccaccttcctcgccgga 246 ||||||||||||||| ||||||||||||| | |||||| || |||||||||||||||||| Sbjct: 27696361 caggcgcggtgcatcgccgacgtgcgcgcggccgccgggtcgaccaccttcctcgccgga 27696420 Query: 247 accctcagcctcaaggaggagaacgaggtgc 277 |||||||| |||||||||||||||||||||| Sbjct: 27696421 accctcagtctcaaggaggagaacgaggtgc 27696451 Score = 127 bits (64), Expect = 1e-25 Identities = 94/104 (90%) Strand = Plus / Plus Query: 518 gtgttctctggtggccactggggaagcatgataagttaattagcatcgatgacagaaaca 577 ||||||||||||||||||| |||||||| || ||||||||||| || ||||||||||| | Sbjct: 27697529 gtgttctctggtggccactagggaagcacgacaagttaattagtattgatgacagaaata 27697588 Query: 578 tttttctctggaacatagatccatcaaataaatcagccaaggtg 621 |||| |||||||| |||||| |||||||||| |||||||||||| Sbjct: 27697589 ttttcctctggaatatagatgcatcaaataagtcagccaaggtg 27697632 Score = 113 bits (57), Expect = 2e-21 Identities = 81/89 (91%) Strand = Plus / Plus Query: 818 caacagcagaggacgaatttggaattcgtttgtgggatctcagaatgcttaagcatcctc 877 |||||||||| || |||||||| || ||||||||||||||||||||||||||| |||||| Sbjct: 27698549 caacagcagaagatgaatttggtatccgtttgtgggatctcagaatgcttaagtatcctc 27698608 Query: 878 tgaaggatctccctggacattcacattgg 906 ||||| |||||||||| ||||| |||||| Sbjct: 27698609 tgaagaatctccctgggcattcgcattgg 27698637 Score = 99.6 bits (50), Expect = 3e-17 Identities = 56/58 (96%) Strand = Plus / Plus Query: 134 gagcgagaatgcagggtggatccagcggcatcgtctacggcggcctcaagtaccaggc 191 |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 27696234 gagcgagaatgcagggcggatctagcggcatcgtctacggcggcctcaagtaccaggc 27696291 Score = 99.6 bits (50), Expect = 3e-17 Identities = 95/110 (86%) Strand = Plus / Plus Query: 409 gagggttatggcgcgtcagtttggaagatcccggagctgtatgggcagtccaactcaccg 468 ||||| ||||| || || ||||||||||||||||||||| | |||||||| || || ||| Sbjct: 27696842 gagggctatggtgcatctgtttggaagatcccggagctgcacgggcagtcgaattcgccg 27696901 Query: 469 cagcttgagcagcttttcgcgctcgatgaccacacggacaaaataagatg 518 | ||||||||||||||| |||| ||||| ||||||| |||||||||||| Sbjct: 27696902 ccacttgagcagcttttcacgcttgatgagcacacgggcaaaataagatg 27696951 Score = 87.7 bits (44), Expect = 1e-13 Identities = 65/72 (90%) Strand = Plus / Plus Query: 951 gagtgctggaacggattcagctgtcaatttatggttggctaaagttggcagtgatgactc 1010 |||||||||||| |||||| |||||||||| ||||| ||||||||||||| ||||||||| Sbjct: 27698853 gagtgctggaacagattcaactgtcaatttgtggtttgctaaagttggcactgatgactc 27698912 Query: 1011 tggacccgaaag 1022 ||||| ||||| Sbjct: 27698913 aggacctgaaag 27698924 Score = 77.8 bits (39), Expect = 1e-10 Identities = 54/59 (91%) Strand = Plus / Plus Query: 1099 attgcatggagctcccatgatccatcgttgtttgcttctttgtcttatgatggaagggt 1157 ||||||||||||||||||||||| || || ||||||||||| |||||||| |||||||| Sbjct: 27699162 attgcatggagctcccatgatccgtcattatttgcttctttatcttatgacggaagggt 27699220 Score = 75.8 bits (38), Expect = 4e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 750 atcaaatgcaattgaacatgctcatatccgggatgtggattataaccccaagaa 803 ||||||||||||||| ||||| ||| | |||||||||||||||||||||||||| Sbjct: 27698049 atcaaatgcaattgagcatgcgcattttcgggatgtggattataaccccaagaa 27698102 Score = 61.9 bits (31), Expect = 7e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 905 ggacatgggctgttcggcacaatcctgagtatgatgagctgattctg 951 ||||||||||||||||||||||||||||| |||| || |||||||| Sbjct: 27698718 ggacatgggctgttcggcacaatcctgagcatgaccagttgattctg 27698764 Score = 61.9 bits (31), Expect = 7e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 1155 ggttgttttagaatctgtgaagccccacctgcagagaaaatgaagct 1201 ||||||||||||||| || |||||| || |||||||||||||||||| Sbjct: 27699340 ggttgttttagaatcagtcaagccctacttgcagagaaaatgaagct 27699386 Score = 60.0 bits (30), Expect = 3e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1233 gcaggcttgtttgttgtgcatataattggtgttgtaga 1270 |||| |||||||||||||||||| |||||||||||||| Sbjct: 27699502 gcagacttgtttgttgtgcatattattggtgttgtaga 27699539 Score = 56.0 bits (28), Expect = 4e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 1028 ctggttcacccactaggcaagaagaaccattactgaactcgtatactgactacgaagata 1087 ||||||||||||| || |||||||||||||||| || || || ||||| || ||||||| Sbjct: 27699007 ctggttcacccacaagagaagaagaaccattactaaattcatacactgattatgaagata 27699066 Query: 1088 gcat 1091 |||| Sbjct: 27699067 gcat 27699070
>dbj|AP005251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0011H15 Length = 130146 Score = 149 bits (75), Expect = 4e-32 Identities = 108/119 (90%) Strand = Plus / Plus Query: 629 agggatctgctgacatgcttcccaatttacgtggtggagcttgggatccacacaatcaca 688 |||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 95164 aggggtctgctgacatgcttcccaatttacgtggtggatcttgggatccacacgatcaca 95223 Query: 689 acgcagttgctacaataactgattcgtcactccacttctgggatctccgttctatgaag 747 | || ||||| |||| |||||||| ||||| |||| |||||||||||||||||||||| Sbjct: 95224 attcaattgctgcaattactgattcctcacttcactgctgggatctccgttctatgaag 95282 Score = 137 bits (69), Expect = 1e-28 Identities = 120/137 (87%) Strand = Plus / Plus Query: 272 aggtgcacctgatccggctgctgccgggggagaacgagctcgtgtgcgacgggctgttct 331 ||||||||||||||||| | |||| ||||| |||||| ||||||||||||||||||| Sbjct: 93941 aggtgcacctgatccggttttcaccggcggagagcgagctggtgtgcgacgggctgttct 94000 Query: 332 accatcccaacgagatctgggacctcaagtcctgccccttcgaccacaggttattctcca 391 ||||||| ||||||||||||||||| ||||| ||||||||||| || ||| | ||||||| Sbjct: 94001 accatccaaacgagatctgggaccttaagtcttgccccttcgatcatagggtcttctcca 94060 Query: 392 cggtctacacctctggt 408 | |||||||| |||||| Sbjct: 94061 cagtctacacgtctggt 94077 Score = 133 bits (67), Expect = 2e-27 Identities = 85/91 (93%) Strand = Plus / Plus Query: 187 caggcgcggtgcatcaccgacgtgcgcgcagacgccggttccaccaccttcctcgccgga 246 ||||||||||||||| ||||||||||||| | |||||| || |||||||||||||||||| Sbjct: 93705 caggcgcggtgcatcgccgacgtgcgcgcggccgccgggtcgaccaccttcctcgccgga 93764 Query: 247 accctcagcctcaaggaggagaacgaggtgc 277 |||||||| |||||||||||||||||||||| Sbjct: 93765 accctcagtctcaaggaggagaacgaggtgc 93795 Score = 127 bits (64), Expect = 1e-25 Identities = 94/104 (90%) Strand = Plus / Plus Query: 518 gtgttctctggtggccactggggaagcatgataagttaattagcatcgatgacagaaaca 577 ||||||||||||||||||| |||||||| || ||||||||||| || ||||||||||| | Sbjct: 94873 gtgttctctggtggccactagggaagcacgacaagttaattagtattgatgacagaaata 94932 Query: 578 tttttctctggaacatagatccatcaaataaatcagccaaggtg 621 |||| |||||||| |||||| |||||||||| |||||||||||| Sbjct: 94933 ttttcctctggaatatagatgcatcaaataagtcagccaaggtg 94976 Score = 113 bits (57), Expect = 2e-21 Identities = 81/89 (91%) Strand = Plus / Plus Query: 818 caacagcagaggacgaatttggaattcgtttgtgggatctcagaatgcttaagcatcctc 877 |||||||||| || |||||||| || ||||||||||||||||||||||||||| |||||| Sbjct: 95893 caacagcagaagatgaatttggtatccgtttgtgggatctcagaatgcttaagtatcctc 95952 Query: 878 tgaaggatctccctggacattcacattgg 906 ||||| |||||||||| ||||| |||||| Sbjct: 95953 tgaagaatctccctgggcattcgcattgg 95981 Score = 99.6 bits (50), Expect = 3e-17 Identities = 56/58 (96%) Strand = Plus / Plus Query: 134 gagcgagaatgcagggtggatccagcggcatcgtctacggcggcctcaagtaccaggc 191 |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 93578 gagcgagaatgcagggcggatctagcggcatcgtctacggcggcctcaagtaccaggc 93635 Score = 99.6 bits (50), Expect = 3e-17 Identities = 95/110 (86%) Strand = Plus / Plus Query: 409 gagggttatggcgcgtcagtttggaagatcccggagctgtatgggcagtccaactcaccg 468 ||||| ||||| || || ||||||||||||||||||||| | |||||||| || || ||| Sbjct: 94186 gagggctatggtgcatctgtttggaagatcccggagctgcacgggcagtcgaattcgccg 94245 Query: 469 cagcttgagcagcttttcgcgctcgatgaccacacggacaaaataagatg 518 | ||||||||||||||| |||| ||||| ||||||| |||||||||||| Sbjct: 94246 ccacttgagcagcttttcacgcttgatgagcacacgggcaaaataagatg 94295 Score = 87.7 bits (44), Expect = 1e-13 Identities = 65/72 (90%) Strand = Plus / Plus Query: 951 gagtgctggaacggattcagctgtcaatttatggttggctaaagttggcagtgatgactc 1010 |||||||||||| |||||| |||||||||| ||||| ||||||||||||| ||||||||| Sbjct: 96197 gagtgctggaacagattcaactgtcaatttgtggtttgctaaagttggcactgatgactc 96256 Query: 1011 tggacccgaaag 1022 ||||| ||||| Sbjct: 96257 aggacctgaaag 96268 Score = 77.8 bits (39), Expect = 1e-10 Identities = 54/59 (91%) Strand = Plus / Plus Query: 1099 attgcatggagctcccatgatccatcgttgtttgcttctttgtcttatgatggaagggt 1157 ||||||||||||||||||||||| || || ||||||||||| |||||||| |||||||| Sbjct: 96506 attgcatggagctcccatgatccgtcattatttgcttctttatcttatgacggaagggt 96564 Score = 75.8 bits (38), Expect = 4e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 750 atcaaatgcaattgaacatgctcatatccgggatgtggattataaccccaagaa 803 ||||||||||||||| ||||| ||| | |||||||||||||||||||||||||| Sbjct: 95393 atcaaatgcaattgagcatgcgcattttcgggatgtggattataaccccaagaa 95446 Score = 61.9 bits (31), Expect = 7e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 905 ggacatgggctgttcggcacaatcctgagtatgatgagctgattctg 951 ||||||||||||||||||||||||||||| |||| || |||||||| Sbjct: 96062 ggacatgggctgttcggcacaatcctgagcatgaccagttgattctg 96108 Score = 61.9 bits (31), Expect = 7e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 1155 ggttgttttagaatctgtgaagccccacctgcagagaaaatgaagct 1201 ||||||||||||||| || |||||| || |||||||||||||||||| Sbjct: 96684 ggttgttttagaatcagtcaagccctacttgcagagaaaatgaagct 96730 Score = 60.0 bits (30), Expect = 3e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1233 gcaggcttgtttgttgtgcatataattggtgttgtaga 1270 |||| |||||||||||||||||| |||||||||||||| Sbjct: 96846 gcagacttgtttgttgtgcatattattggtgttgtaga 96883 Score = 56.0 bits (28), Expect = 4e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 1028 ctggttcacccactaggcaagaagaaccattactgaactcgtatactgactacgaagata 1087 ||||||||||||| || |||||||||||||||| || || || ||||| || ||||||| Sbjct: 96351 ctggttcacccacaagagaagaagaaccattactaaattcatacactgattatgaagata 96410 Query: 1088 gcat 1091 |||| Sbjct: 96411 gcat 96414
>dbj|AP004044.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1125_C01 Length = 123849 Score = 149 bits (75), Expect = 4e-32 Identities = 108/119 (90%) Strand = Plus / Plus Query: 629 agggatctgctgacatgcttcccaatttacgtggtggagcttgggatccacacaatcaca 688 |||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 30742 aggggtctgctgacatgcttcccaatttacgtggtggatcttgggatccacacgatcaca 30801 Query: 689 acgcagttgctacaataactgattcgtcactccacttctgggatctccgttctatgaag 747 | || ||||| |||| |||||||| ||||| |||| |||||||||||||||||||||| Sbjct: 30802 attcaattgctgcaattactgattcctcacttcactgctgggatctccgttctatgaag 30860 Score = 137 bits (69), Expect = 1e-28 Identities = 120/137 (87%) Strand = Plus / Plus Query: 272 aggtgcacctgatccggctgctgccgggggagaacgagctcgtgtgcgacgggctgttct 331 ||||||||||||||||| | |||| ||||| |||||| ||||||||||||||||||| Sbjct: 29519 aggtgcacctgatccggttttcaccggcggagagcgagctggtgtgcgacgggctgttct 29578 Query: 332 accatcccaacgagatctgggacctcaagtcctgccccttcgaccacaggttattctcca 391 ||||||| ||||||||||||||||| ||||| ||||||||||| || ||| | ||||||| Sbjct: 29579 accatccaaacgagatctgggaccttaagtcttgccccttcgatcatagggtcttctcca 29638 Query: 392 cggtctacacctctggt 408 | |||||||| |||||| Sbjct: 29639 cagtctacacgtctggt 29655 Score = 133 bits (67), Expect = 2e-27 Identities = 85/91 (93%) Strand = Plus / Plus Query: 187 caggcgcggtgcatcaccgacgtgcgcgcagacgccggttccaccaccttcctcgccgga 246 ||||||||||||||| ||||||||||||| | |||||| || |||||||||||||||||| Sbjct: 29283 caggcgcggtgcatcgccgacgtgcgcgcggccgccgggtcgaccaccttcctcgccgga 29342 Query: 247 accctcagcctcaaggaggagaacgaggtgc 277 |||||||| |||||||||||||||||||||| Sbjct: 29343 accctcagtctcaaggaggagaacgaggtgc 29373 Score = 127 bits (64), Expect = 1e-25 Identities = 94/104 (90%) Strand = Plus / Plus Query: 518 gtgttctctggtggccactggggaagcatgataagttaattagcatcgatgacagaaaca 577 ||||||||||||||||||| |||||||| || ||||||||||| || ||||||||||| | Sbjct: 30451 gtgttctctggtggccactagggaagcacgacaagttaattagtattgatgacagaaata 30510 Query: 578 tttttctctggaacatagatccatcaaataaatcagccaaggtg 621 |||| |||||||| |||||| |||||||||| |||||||||||| Sbjct: 30511 ttttcctctggaatatagatgcatcaaataagtcagccaaggtg 30554 Score = 113 bits (57), Expect = 2e-21 Identities = 81/89 (91%) Strand = Plus / Plus Query: 818 caacagcagaggacgaatttggaattcgtttgtgggatctcagaatgcttaagcatcctc 877 |||||||||| || |||||||| || ||||||||||||||||||||||||||| |||||| Sbjct: 31471 caacagcagaagatgaatttggtatccgtttgtgggatctcagaatgcttaagtatcctc 31530 Query: 878 tgaaggatctccctggacattcacattgg 906 ||||| |||||||||| ||||| |||||| Sbjct: 31531 tgaagaatctccctgggcattcgcattgg 31559 Score = 99.6 bits (50), Expect = 3e-17 Identities = 56/58 (96%) Strand = Plus / Plus Query: 134 gagcgagaatgcagggtggatccagcggcatcgtctacggcggcctcaagtaccaggc 191 |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 29156 gagcgagaatgcagggcggatctagcggcatcgtctacggcggcctcaagtaccaggc 29213 Score = 99.6 bits (50), Expect = 3e-17 Identities = 95/110 (86%) Strand = Plus / Plus Query: 409 gagggttatggcgcgtcagtttggaagatcccggagctgtatgggcagtccaactcaccg 468 ||||| ||||| || || ||||||||||||||||||||| | |||||||| || || ||| Sbjct: 29764 gagggctatggtgcatctgtttggaagatcccggagctgcacgggcagtcgaattcgccg 29823 Query: 469 cagcttgagcagcttttcgcgctcgatgaccacacggacaaaataagatg 518 | ||||||||||||||| |||| ||||| ||||||| |||||||||||| Sbjct: 29824 ccacttgagcagcttttcacgcttgatgagcacacgggcaaaataagatg 29873 Score = 87.7 bits (44), Expect = 1e-13 Identities = 65/72 (90%) Strand = Plus / Plus Query: 951 gagtgctggaacggattcagctgtcaatttatggttggctaaagttggcagtgatgactc 1010 |||||||||||| |||||| |||||||||| ||||| ||||||||||||| ||||||||| Sbjct: 31775 gagtgctggaacagattcaactgtcaatttgtggtttgctaaagttggcactgatgactc 31834 Query: 1011 tggacccgaaag 1022 ||||| ||||| Sbjct: 31835 aggacctgaaag 31846 Score = 77.8 bits (39), Expect = 1e-10 Identities = 54/59 (91%) Strand = Plus / Plus Query: 1099 attgcatggagctcccatgatccatcgttgtttgcttctttgtcttatgatggaagggt 1157 ||||||||||||||||||||||| || || ||||||||||| |||||||| |||||||| Sbjct: 32084 attgcatggagctcccatgatccgtcattatttgcttctttatcttatgacggaagggt 32142 Score = 75.8 bits (38), Expect = 4e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 750 atcaaatgcaattgaacatgctcatatccgggatgtggattataaccccaagaa 803 ||||||||||||||| ||||| ||| | |||||||||||||||||||||||||| Sbjct: 30971 atcaaatgcaattgagcatgcgcattttcgggatgtggattataaccccaagaa 31024 Score = 61.9 bits (31), Expect = 7e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 905 ggacatgggctgttcggcacaatcctgagtatgatgagctgattctg 951 ||||||||||||||||||||||||||||| |||| || |||||||| Sbjct: 31640 ggacatgggctgttcggcacaatcctgagcatgaccagttgattctg 31686 Score = 61.9 bits (31), Expect = 7e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 1155 ggttgttttagaatctgtgaagccccacctgcagagaaaatgaagct 1201 ||||||||||||||| || |||||| || |||||||||||||||||| Sbjct: 32262 ggttgttttagaatcagtcaagccctacttgcagagaaaatgaagct 32308 Score = 60.0 bits (30), Expect = 3e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 1233 gcaggcttgtttgttgtgcatataattggtgttgtaga 1270 |||| |||||||||||||||||| |||||||||||||| Sbjct: 32424 gcagacttgtttgttgtgcatattattggtgttgtaga 32461 Score = 56.0 bits (28), Expect = 4e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 1028 ctggttcacccactaggcaagaagaaccattactgaactcgtatactgactacgaagata 1087 ||||||||||||| || |||||||||||||||| || || || ||||| || ||||||| Sbjct: 31929 ctggttcacccacaagagaagaagaaccattactaaattcatacactgattatgaagata 31988 Query: 1088 gcat 1091 |||| Sbjct: 31989 gcat 31992
>ref|NM_106276.3| Arabidopsis thaliana nucleotide binding (AT1G76260) mRNA, complete cds Length = 2050 Score = 65.9 bits (33), Expect = 4e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 886 ctccctggacattcacattggacatgggctgttcggcacaatcctgagtatgatgagctg 945 |||||||| ||| |||| |||||||||||||| || || ||||||||||| ||||| Sbjct: 793 ctccctggtcatacacactggacatgggctgtcaggtgtaaccctgagtatgaagagcta 852 Query: 946 attctgagtgctggaacggattcagctgtcaatttatggtt 986 |||||||| | |||||| || ||||||||||| || ||||| Sbjct: 853 attctgagcgttggaacagactcagctgtcaacttgtggtt 893 Score = 42.1 bits (21), Expect = 6.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1057 ttactgaactcgtatactgactacgaaga 1085 ||||| ||||| ||||||||||||||||| Sbjct: 964 ttactaaactcttatactgactacgaaga 992
>gb|BT010880.1| Arabidopsis thaliana At1g76260 gene, complete cds Length = 1053 Score = 65.9 bits (33), Expect = 4e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 886 ctccctggacattcacattggacatgggctgttcggcacaatcctgagtatgatgagctg 945 |||||||| ||| |||| |||||||||||||| || || ||||||||||| ||||| Sbjct: 742 ctccctggtcatacacactggacatgggctgtcaggtgtaaccctgagtatgaagagcta 801 Query: 946 attctgagtgctggaacggattcagctgtcaatttatggtt 986 |||||||| | |||||| || ||||||||||| || ||||| Sbjct: 802 attctgagcgttggaacagactcagctgtcaacttgtggtt 842 Score = 42.1 bits (21), Expect = 6.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1057 ttactgaactcgtatactgactacgaaga 1085 ||||| ||||| ||||||||||||||||| Sbjct: 913 ttactaaactcttatactgactacgaaga 941
>dbj|AK176650.1| Arabidopsis thaliana mRNA for putative WD-repeat protein, complete cds, clone: RAFL25-18-N16 Length = 1305 Score = 65.9 bits (33), Expect = 4e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 886 ctccctggacattcacattggacatgggctgttcggcacaatcctgagtatgatgagctg 945 |||||||| ||| |||| |||||||||||||| || || ||||||||||| ||||| Sbjct: 753 ctccctggtcatacacactggacatgggctgtcaggtgtaaccctgagtatgaagagcta 812 Query: 946 attctgagtgctggaacggattcagctgtcaatttatggtt 986 |||||||| | |||||| || ||||||||||| || ||||| Sbjct: 813 attctgagcgttggaacagactcagctgtcaacttgtggtt 853 Score = 42.1 bits (21), Expect = 6.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1057 ttactgaactcgtatactgactacgaaga 1085 ||||| ||||| ||||||||||||||||| Sbjct: 924 ttactaaactcttatactgactacgaaga 952
>dbj|AK176410.1| Arabidopsis thaliana mRNA for putative WD-repeat protein, complete cds, clone: RAFL24-13-L09 Length = 1341 Score = 65.9 bits (33), Expect = 4e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 886 ctccctggacattcacattggacatgggctgttcggcacaatcctgagtatgatgagctg 945 |||||||| ||| |||| |||||||||||||| || || ||||||||||| ||||| Sbjct: 757 ctccctggtcatacacactggacatgggctgtcaggtgtaaccctgagtatgaagagcta 816 Query: 946 attctgagtgctggaacggattcagctgtcaatttatggtt 986 |||||||| | |||||| || ||||||||||| || ||||| Sbjct: 817 attctgagcgttggaacagactcagctgtcaacttgtggtt 857 Score = 42.1 bits (21), Expect = 6.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1057 ttactgaactcgtatactgactacgaaga 1085 ||||| ||||| ||||||||||||||||| Sbjct: 928 ttactaaactcttatactgactacgaaga 956
>dbj|AK175439.1| Arabidopsis thaliana mRNA for putative WD-repeat protein, complete cds, clone: RAFL21-87-A17 Length = 1337 Score = 65.9 bits (33), Expect = 4e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 886 ctccctggacattcacattggacatgggctgttcggcacaatcctgagtatgatgagctg 945 |||||||| ||| |||| |||||||||||||| || || ||||||||||| ||||| Sbjct: 753 ctccctggtcatacacactggacatgggctgtcaggtgtaaccctgagtatgaagagcta 812 Query: 946 attctgagtgctggaacggattcagctgtcaatttatggtt 986 |||||||| | |||||| || ||||||||||| || ||||| Sbjct: 813 attctgagcgttggaacagactcagctgtcaacttgtggtt 853 Score = 42.1 bits (21), Expect = 6.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1057 ttactgaactcgtatactgactacgaaga 1085 ||||| ||||| ||||||||||||||||| Sbjct: 924 ttactaaactcttatactgactacgaaga 952
>ref|NM_101904.3| Arabidopsis thaliana nucleotide binding (AT1G20540) mRNA, complete cds Length = 1716 Score = 58.0 bits (29), Expect = 1e-04 Identities = 74/89 (83%) Strand = Plus / Plus Query: 889 cctggacattcacattggacatgggctgttcggcacaatcctgagtatgatgagctgatt 948 ||||| ||| |||||||||| |||||||| || || ||||||||||||| |||||| Sbjct: 776 cctggtcatacacattggacttgggctgtcaggtgtaaccctgagtatgatggactgatt 835 Query: 949 ctgagtgctggaacggattcagctgtcaa 977 ||||| |||||||| ||||| | |||||| Sbjct: 836 ctgagcgctggaacagattcggttgtcaa 864
>gb|BT015485.1| Arabidopsis thaliana At1g76260 mRNA sequence Length = 1037 Score = 58.0 bits (29), Expect = 1e-04 Identities = 83/101 (82%) Strand = Plus / Plus Query: 886 ctccctggacattcacattggacatgggctgttcggcacaatcctgagtatgatgagctg 945 |||||||| ||| |||| |||||||||||||| || || |||| |||||| ||||| Sbjct: 726 ctccctggtcatacacactggacatgggctgtcaggtgtaaccctgggtatgaagagcta 785 Query: 946 attctgagtgctggaacggattcagctgtcaatttatggtt 986 |||||||| | |||||| || ||||||||||| || ||||| Sbjct: 786 attctgagcgttggaacagactcagctgtcaacttgtggtt 826 Score = 42.1 bits (21), Expect = 6.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1057 ttactgaactcgtatactgactacgaaga 1085 ||||| ||||| ||||||||||||||||| Sbjct: 897 ttactaaactcttatactgactacgaaga 925
>gb|BT000290.1| Arabidopsis thaliana unknown protein (At1g20540) mRNA, complete cds Length = 1109 Score = 58.0 bits (29), Expect = 1e-04 Identities = 74/89 (83%) Strand = Plus / Plus Query: 889 cctggacattcacattggacatgggctgttcggcacaatcctgagtatgatgagctgatt 948 ||||| ||| |||||||||| |||||||| || || ||||||||||||| |||||| Sbjct: 745 cctggtcatacacattggacttgggctgtcaggtgtaaccctgagtatgatggactgatt 804 Query: 949 ctgagtgctggaacggattcagctgtcaa 977 ||||| |||||||| ||||| | |||||| Sbjct: 805 ctgagcgctggaacagattcggttgtcaa 833
>gb|AY093157.1| Arabidopsis thaliana unknown protein (At1g20540) mRNA, complete cds Length = 1235 Score = 58.0 bits (29), Expect = 1e-04 Identities = 74/89 (83%) Strand = Plus / Plus Query: 889 cctggacattcacattggacatgggctgttcggcacaatcctgagtatgatgagctgatt 948 ||||| ||| |||||||||| |||||||| || || ||||||||||||| |||||| Sbjct: 778 cctggtcatacacattggacttgggctgtcaggtgtaaccctgagtatgatggactgatt 837 Query: 949 ctgagtgctggaacggattcagctgtcaa 977 ||||| |||||||| ||||| | |||||| Sbjct: 838 ctgagcgctggaacagattcggttgtcaa 866
>emb|BX817851.1|CNS0ACE1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL45ZA05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1303 Score = 58.0 bits (29), Expect = 1e-04 Identities = 83/101 (82%) Strand = Plus / Plus Query: 886 ctccctggacattcacattggacatgggctgttcggcacaatcctgagtatgatgagctg 945 |||||||| ||| |||| |||||||||||||| || || |||||||||| ||||| Sbjct: 793 ctccctggtcatacacactggacatgggctgtcaggtgtaaccctgagtatgtagagcta 852 Query: 946 attctgagtgctggaacggattcagctgtcaatttatggtt 986 |||||||| | |||||| || ||||||||||| || ||||| Sbjct: 853 attctgagcgttggaacagactcagctgtcaacttgtggtt 893 Score = 42.1 bits (21), Expect = 6.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1057 ttactgaactcgtatactgactacgaaga 1085 ||||| ||||| ||||||||||||||||| Sbjct: 964 ttactaaactcttatactgactacgaaga 992
>emb|BX815472.1|CNS0ABIG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS63ZC03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1218 Score = 58.0 bits (29), Expect = 1e-04 Identities = 74/89 (83%) Strand = Plus / Plus Query: 889 cctggacattcacattggacatgggctgttcggcacaatcctgagtatgatgagctgatt 948 ||||| ||| |||||||||| |||||||| || || ||||||||||||| |||||| Sbjct: 762 cctggtcatacacattggacttgggctgtcaggtgtaaccctgagtatgatggactgatt 821 Query: 949 ctgagtgctggaacggattcagctgtcaa 977 ||||| |||||||| ||||| | |||||| Sbjct: 822 ctgagcgctggaacagattcggttgtcaa 850
>emb|BX813812.1|CNS0AC4B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB40ZE07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1308 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 928 cctgagtatgatgagctgattctgagtgctggaac 962 |||||||||||||| ||||||||||| |||||||| Sbjct: 941 cctgagtatgatgaactgattctgagcgctggaac 975 Score = 42.1 bits (21), Expect = 6.1 Identities = 81/101 (80%) Strand = Plus / Plus Query: 758 caattgaacatgctcatatccgggatgtggattataaccccaagaagcaaaacataattg 817 ||||||||||||||||| | || | ||| ||||| || ||||||| || | ||| ||| Sbjct: 771 caattgaacatgctcatgtacgcggtgttgattacaatcccaagagagaacatatacttg 830 Query: 818 caacagcagaggacgaatttggaattcgtttgtgggatctc 858 ||| |||||||| |||||||| || | ||| ||||||||| Sbjct: 831 taactgcagaggatgaatttggcatacatttctgggatctc 871
>emb|CT834454.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI016H14, full insert sequence Length = 602 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 117 atcgtcggcgccggcgtgagcg 138 |||||||||||||||||||||| Sbjct: 74 atcgtcggcgccggcgtgagcg 95
>ref|XM_001222308.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_06214) mRNA, complete cds Length = 1116 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 273 ggtgcacctgatccggctgctg 294 |||||||||||||||||||||| Sbjct: 441 ggtgcacctgatccggctgctg 462
>dbj|AK241020.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065055M10, full insert sequence Length = 4484 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 117 atcgtcggcgccggcgtgagcg 138 |||||||||||||||||||||| Sbjct: 2664 atcgtcggcgccggcgtgagcg 2685
>ref|NM_001070391.1| Oryza sativa (japonica cultivar-group) Os09g0548700 (Os09g0548700) mRNA, complete cds Length = 1614 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 117 atcgtcggcgccggcgtgagcg 138 |||||||||||||||||||||| Sbjct: 28 atcgtcggcgccggcgtgagcg 49
>ref|NM_001058810.1| Oryza sativa (japonica cultivar-group) Os04g0224100 (Os04g0224100) mRNA, complete cds Length = 720 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 117 atcgtcggcgccggcgtgagcg 138 |||||||||||||||||||||| Sbjct: 241 atcgtcggcgccggcgtgagcg 262
>ref|NM_001058809.1| Oryza sativa (japonica cultivar-group) Os04g0224000 (Os04g0224000) mRNA, partial cds Length = 1631 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 atcgtcggcgccggcgtgagcg 138 |||||||||||||||||||||| Sbjct: 1444 atcgtcggcgccggcgtgagcg 1423
>ref|NM_001058807.1| Oryza sativa (japonica cultivar-group) Os04g0223500 (Os04g0223500) mRNA, complete cds Length = 1783 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 117 atcgtcggcgccggcgtgagcg 138 |||||||||||||||||||||| Sbjct: 73 atcgtcggcgccggcgtgagcg 94
>emb|CT571254.7| Mouse DNA sequence from clone RP23-335F6 on chromosome 12, complete sequence Length = 189879 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1368 aggatggtttctggaggaaaaa 1389 |||||||||||||||||||||| Sbjct: 78971 aggatggtttctggaggaaaaa 78950
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 atcgtcggcgccggcgtgagcg 138 |||||||||||||||||||||| Sbjct: 21400091 atcgtcggcgccggcgtgagcg 21400070
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 atcgtcggcgccggcgtgagcg 138 |||||||||||||||||||||| Sbjct: 8208727 atcgtcggcgccggcgtgagcg 8208706 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 atcgtcggcgccggcgtgagcg 138 |||||||||||||||||||||| Sbjct: 8227402 atcgtcggcgccggcgtgagcg 8227381
>emb|AL606634.2|OSJN00066 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0072N21, complete sequence Length = 130433 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 atcgtcggcgccggcgtgagcg 138 |||||||||||||||||||||| Sbjct: 19240 atcgtcggcgccggcgtgagcg 19219 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 atcgtcggcgccggcgtgagcg 138 |||||||||||||||||||||| Sbjct: 37915 atcgtcggcgccggcgtgagcg 37894
>dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1210_A07 Length = 131394 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 atcgtcggcgccggcgtgagcg 138 |||||||||||||||||||||| Sbjct: 17196 atcgtcggcgccggcgtgagcg 17175
>dbj|AK105500.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-D04, full insert sequence Length = 1631 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 117 atcgtcggcgccggcgtgagcg 138 |||||||||||||||||||||| Sbjct: 1444 atcgtcggcgccggcgtgagcg 1423
>dbj|AK071801.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110J22, full insert sequence Length = 1787 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 117 atcgtcggcgccggcgtgagcg 138 |||||||||||||||||||||| Sbjct: 74 atcgtcggcgccggcgtgagcg 95
>gb|CP000488.1| Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica), complete genome Length = 1160782 Score = 42.1 bits (21), Expect = 6.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1385 aaaaagtgatgtagtcacagtcaaaaagaatatagca 1421 ||||||| || |||| | ||||||||||||||||||| Sbjct: 276998 aaaaagtcatatagtaagagtcaaaaagaatatagca 277034
>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome Length = 6988209 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 tcgtcggcgccggcgtgagcg 138 ||||||||||||||||||||| Sbjct: 6702166 tcgtcggcgccggcgtgagcg 6702186
>gb|CP000458.1| Burkholderia cenocepacia HI2424 chromosome 1, complete genome Length = 3483902 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 cgatcgtcggcgccggcgtga 135 ||||||||||||||||||||| Sbjct: 1396142 cgatcgtcggcgccggcgtga 1396162
>ref|NM_001072444.1| Oryza sativa (japonica cultivar-group) Os11g0183800 (Os11g0183800) mRNA, complete cds Length = 6471 Score = 42.1 bits (21), Expect = 6.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1405 tcaaaaagaatatagcacagctgag 1429 ||||||||||||||||| ||||||| Sbjct: 4157 tcaaaaagaatatagcagagctgag 4133
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 980 tatggttggctaaagttggca 1000 ||||||||||||||||||||| Sbjct: 16028465 tatggttggctaaagttggca 16028485
>gb|AC189318.1| Brassica rapa subsp. pekinensis clone KBrB036G18, complete sequence Length = 128207 Score = 42.1 bits (21), Expect = 6.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 228 caccaccttcctcgccggaaccctcagcctcaaggaggagaacgaggtg 276 ||||| ||||||| | ||||| || |||||||| || |||||||||||| Sbjct: 78415 caccagcttcctcactggaacactaagcctcaaagaagagaacgaggtg 78463
>dbj|AK229613.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL19-54-D12 Length = 1966 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 ccaccaccttcctcgccggaa 247 ||||||||||||||||||||| Sbjct: 73 ccaccaccttcctcgccggaa 53
>gb|CP000378.1| Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence Length = 3294563 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 cgatcgtcggcgccggcgtga 135 ||||||||||||||||||||| Sbjct: 851507 cgatcgtcggcgccggcgtga 851527
>ref|NM_106136.3| Arabidopsis thaliana unknown protein (AT1G74780) mRNA, complete cds Length = 1975 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 ccaccaccttcctcgccggaa 247 ||||||||||||||||||||| Sbjct: 89 ccaccaccttcctcgccggaa 69
>gb|BC105954.1| Homo sapiens matrix metallopeptidase 3 (stromelysin 1, progelatinase), mRNA (cDNA clone MGC:126104 IMAGE:40033171), complete cds Length = 1598 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 742 atgaagagatcaaatgcaatt 762 ||||||||||||||||||||| Sbjct: 1050 atgaagagatcaaatgcaatt 1030
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 cgatcgtcggcgccggcgtga 135 ||||||||||||||||||||| Sbjct: 1366991 cgatcgtcggcgccggcgtga 1367011
>gb|AC134047.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052O08 map MAP_LOC, complete sequence Length = 154839 Score = 42.1 bits (21), Expect = 6.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1405 tcaaaaagaatatagcacagctgag 1429 ||||||||||||||||| ||||||| Sbjct: 2051 tcaaaaagaatatagcagagctgag 2027
>gb|AC146328.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0018J01, complete sequence Length = 82510 Score = 42.1 bits (21), Expect = 6.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1405 tcaaaaagaatatagcacagctgag 1429 ||||||||||||||||| ||||||| Sbjct: 269 tcaaaaagaatatagcagagctgag 293
>gb|AC122455.4| Mus musculus BAC clone RP24-263K11 from chromosome 8, complete sequence Length = 148213 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 788 attataaccccaagaagcaaa 808 ||||||||||||||||||||| Sbjct: 91759 attataaccccaagaagcaaa 91739
>gb|AC113587.16| Mus musculus chromosome 15, clone RP24-424I13, complete sequence Length = 191054 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1409 aaagaatatagcacagctgag 1429 ||||||||||||||||||||| Sbjct: 41236 aaagaatatagcacagctgag 41256
>gb|AC092585.2| Homo sapiens BAC clone RP11-20L17 from 7, complete sequence Length = 137446 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1156 gttgttttagaatctgtgaag 1176 ||||||||||||||||||||| Sbjct: 39870 gttgttttagaatctgtgaag 39850
>gb|BC074869.2| Homo sapiens matrix metallopeptidase 3 (stromelysin 1, progelatinase), mRNA (cDNA clone MGC:104024 IMAGE:30915468), complete cds Length = 1511 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 742 atgaagagatcaaatgcaatt 762 ||||||||||||||||||||| Sbjct: 1039 atgaagagatcaaatgcaatt 1019
>gb|BC074815.2| Homo sapiens matrix metallopeptidase 3 (stromelysin 1, progelatinase), mRNA (cDNA clone MGC:103927 IMAGE:30915319), complete cds Length = 1511 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 742 atgaagagatcaaatgcaatt 762 ||||||||||||||||||||| Sbjct: 1039 atgaagagatcaaatgcaatt 1019
>gb|BC069716.1| Homo sapiens matrix metallopeptidase 3 (stromelysin 1, progelatinase), mRNA (cDNA clone MGC:97338 IMAGE:7262590), complete cds Length = 1650 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 742 atgaagagatcaaatgcaatt 762 ||||||||||||||||||||| Sbjct: 1057 atgaagagatcaaatgcaatt 1037
>gb|BC069676.1| Homo sapiens matrix metallopeptidase 3 (stromelysin 1, progelatinase), mRNA (cDNA clone MGC:97329 IMAGE:7262578), complete cds Length = 1649 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 742 atgaagagatcaaatgcaatt 762 ||||||||||||||||||||| Sbjct: 1057 atgaagagatcaaatgcaatt 1037
>gb|AC127495.2| Homo sapiens chromosome 11, clone RP11-463K8, complete sequence Length = 178648 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1156 gttgttttagaatctgtgaag 1176 ||||||||||||||||||||| Sbjct: 11806 gttgttttagaatctgtgaag 11826
>gb|AC122715.2| Homo sapiens chromosome 5 clone RP11-52C13, complete sequence Length = 167763 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1156 gttgttttagaatctgtgaag 1176 ||||||||||||||||||||| Sbjct: 132210 gttgttttagaatctgtgaag 132190
>dbj|AK220600.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL19-19-E12 Length = 789 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 ccaccaccttcctcgccggaa 247 ||||||||||||||||||||| Sbjct: 86 ccaccaccttcctcgccggaa 66
>ref|NM_001078054.1| Bos taurus interferon-induced transmembrane protein (LOC615833), mRNA gb|BC102339.1| Bos taurus interferon-induced transmembrane protein, mRNA (cDNA clone MGC:127371 IMAGE:7952082), complete cds Length = 664 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 ctcaaggaggagaacgaggtg 276 ||||||||||||||||||||| Sbjct: 99 ctcaaggaggagaacgaggtg 119
>emb|CT010431.7| Mouse DNA sequence from clone RP23-453M21 on chromosome 13, complete sequence Length = 204148 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1438 agttctcctatatcttcaaat 1458 ||||||||||||||||||||| Sbjct: 142316 agttctcctatatcttcaaat 142336
>gb|AC018563.7| Homo sapiens, clone RP11-122D10, complete sequence Length = 174691 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1551 catgatgtgatgaagtataag 1571 ||||||||||||||||||||| Sbjct: 24503 catgatgtgatgaagtataag 24523
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 6.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1405 tcaaaaagaatatagcacagctgag 1429 ||||||||||||||||| ||||||| Sbjct: 4220541 tcaaaaagaatatagcagagctgag 4220517
>emb|AL513328.12| Human DNA sequence from clone RP13-461N9 on chromosome 9 Contains the 5' end of the MUSK gene for muscle, skeletal, receptor tyrosine kinase and a ribosomal protein S21 (RPS21) pseudogene, complete sequence Length = 126999 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1208 tctattttctccacttcatgt 1228 ||||||||||||||||||||| Sbjct: 47625 tctattttctccacttcatgt 47645
>dbj|AK223291.1| Homo sapiens mRNA for matrix metalloproteinase 3 preproprotein variant, clone: SYN04583 Length = 1832 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 742 atgaagagatcaaatgcaatt 762 ||||||||||||||||||||| Sbjct: 1056 atgaagagatcaaatgcaatt 1036
>dbj|AK223283.1| Homo sapiens mRNA for matrix metalloproteinase 3 preproprotein variant, clone: SYN03389 Length = 1813 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 742 atgaagagatcaaatgcaatt 762 ||||||||||||||||||||| Sbjct: 1055 atgaagagatcaaatgcaatt 1035
>emb|AL121968.10|HSJ196B13 Human DNA sequence from clone RP1-196B13 on chromosome 6q22.2-22.33 Contains part of the TCBA1 gene for T-cell lymphoma breakpoint associated target 1, complete sequence Length = 124219 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1126 ttgtttgcttctttgtcttat 1146 ||||||||||||||||||||| Sbjct: 93379 ttgtttgcttctttgtcttat 93399
>gb|AC099012.1| Drosophila melanogaster, chromosome 2R, region 56F-57X, BAC clone BACR23F24, complete sequence Length = 183592 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 980 tatggttggctaaagttggca 1000 ||||||||||||||||||||| Sbjct: 61128 tatggttggctaaagttggca 61148
>gb|AF405705.1|AF405705 Homo sapiens matrix metalloproteinase 3 (stromelysin 1, progelatinase) (MMP3) gene, complete cds Length = 13003 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 742 atgaagagatcaaatgcaatt 762 ||||||||||||||||||||| Sbjct: 7225 atgaagagatcaaatgcaatt 7205
>gb|U78045.1|HSU78045 Human collagenase and stromelysin genes, complete cds, and metalloelastase gene, partial cds Length = 81826 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 742 atgaagagatcaaatgcaatt 762 ||||||||||||||||||||| Sbjct: 52980 atgaagagatcaaatgcaatt 53000
>gb|BT006158.1| Arabidopsis thaliana clone RAFL19-54-D12 (R50668) unknown protein (At1g74780) mRNA, complete cds Length = 1972 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 ccaccaccttcctcgccggaa 247 ||||||||||||||||||||| Sbjct: 73 ccaccaccttcctcgccggaa 53
>gb|AC019016.7| Homo sapiens chromosome 15, clone RP11-201P10, complete sequence Length = 53718 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1551 catgatgtgatgaagtataag 1571 ||||||||||||||||||||| Sbjct: 4922 catgatgtgatgaagtataag 4902
>gb|AC097314.27| Homo sapiens X BAC RP11-155F12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 80501 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1508 actagaattctgataactgtt 1528 ||||||||||||||||||||| Sbjct: 11622 actagaattctgataactgtt 11602
>gb|AC007496.6| Homo sapiens chromosome 16 clone RP11-357N13, complete sequence Length = 198417 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 791 ataaccccaagaagcaaaaca 811 ||||||||||||||||||||| Sbjct: 160994 ataaccccaagaagcaaaaca 161014
>gb|AC105760.3| Homo sapiens BAC clone RP11-346I14 from 2, complete sequence Length = 77730 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 997 ggcagtgatgactctggaccc 1017 ||||||||||||||||||||| Sbjct: 7020 ggcagtgatgactctggaccc 7040
>gb|AC012394.3|AC012394 Arabidopsis thaliana chromosome 1 BAC F15M4 genomic sequence, complete sequence Length = 94487 Score = 42.1 bits (21), Expect = 6.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1057 ttactgaactcgtatactgactacgaaga 1085 ||||| ||||| ||||||||||||||||| Sbjct: 92824 ttactaaactcttatactgactacgaaga 92796
>gb|AC009978.3|AC009978 Genomic sequence for Arabidopsis thaliana BAC T23E18 from chromosome I, complete sequence Length = 97554 Score = 42.1 bits (21), Expect = 6.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1057 ttactgaactcgtatactgactacgaaga 1085 ||||| ||||| ||||||||||||||||| Sbjct: 68815 ttactaaactcttatactgactacgaaga 68843
>dbj|AP006724.1| Homo sapiens genomic DNA, chromosome 11 clone:RP11-17M1, complete sequence Length = 171460 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1156 gttgttttagaatctgtgaag 1176 ||||||||||||||||||||| Sbjct: 105192 gttgttttagaatctgtgaag 105172
>emb|BX816678.1|CNS0ABO8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH62ZB03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1725 Score = 42.1 bits (21), Expect = 6.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1057 ttactgaactcgtatactgactacgaaga 1085 ||||| ||||| ||||||||||||||||| Sbjct: 1333 ttactaaactcttatactgactacgaaga 1361
>gb|AC123724.9| Mus musculus chromosome 15, clone RP23-432N1, complete sequence Length = 200503 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1409 aaagaatatagcacagctgag 1429 ||||||||||||||||||||| Sbjct: 165403 aaagaatatagcacagctgag 165423
>emb|AJ506370.1|ATH506370 Arabidopsis thaliana single-copy transgenic T-DNA insertion line, clone MDL-BfBf-105_RB Length = 571 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 ccaccaccttcctcgccggaa 247 ||||||||||||||||||||| Sbjct: 350 ccaccaccttcctcgccggaa 330
>dbj|AP000789.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-725K16, complete sequence Length = 195874 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 742 atgaagagatcaaatgcaatt 762 ||||||||||||||||||||| Sbjct: 7420 atgaagagatcaaatgcaatt 7440
>dbj|AP000619.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-42C6, complete sequence Length = 103181 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 742 atgaagagatcaaatgcaatt 762 ||||||||||||||||||||| Sbjct: 90711 atgaagagatcaaatgcaatt 90731
>gb|AC008263.2|F25A4 Arabidopsis thaliana chromosome 1 BAC F25A4 sequence, complete sequence Length = 115721 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 ccaccaccttcctcgccggaa 247 ||||||||||||||||||||| Sbjct: 79127 ccaccaccttcctcgccggaa 79147
>ref|NM_002422.3| Homo sapiens matrix metallopeptidase 3 (stromelysin 1, progelatinase) (MMP3), mRNA Length = 1828 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 742 atgaagagatcaaatgcaatt 762 ||||||||||||||||||||| Sbjct: 1059 atgaagagatcaaatgcaatt 1039
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 6.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 258 caaggaggagaacgaggtgcacctg 282 |||||||||||||||||||| |||| Sbjct: 2762201 caaggaggagaacgaggtgctcctg 2762177
>gb|BC107491.1| Homo sapiens matrix metallopeptidase 3 (stromelysin 1, progelatinase), mRNA (cDNA clone MGC:126103 IMAGE:40033170), complete cds Length = 1600 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 742 atgaagagatcaaatgcaatt 762 ||||||||||||||||||||| Sbjct: 1050 atgaagagatcaaatgcaatt 1030
>gb|AC005286.1|AC005286 Drosophila melanogaster DNA sequence (P1s DS01995 (D179), DS03499 (D217), and DS08132 (D174)), complete sequence Length = 173970 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 980 tatggttggctaaagttggca 1000 ||||||||||||||||||||| Sbjct: 67502 tatggttggctaaagttggca 67522
>gb|BC107490.1| Homo sapiens matrix metallopeptidase 3 (stromelysin 1, progelatinase), mRNA (cDNA clone MGC:126102 IMAGE:40033168), complete cds Length = 1600 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 742 atgaagagatcaaatgcaatt 762 ||||||||||||||||||||| Sbjct: 1050 atgaagagatcaaatgcaatt 1030
>emb|AL671338.15| Mouse DNA sequence from clone RP23-113J9 on chromosome 4, complete sequence Length = 172327 Score = 42.1 bits (21), Expect = 6.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 567 tgacagaaacatttttctctggaac 591 ||||||| ||||||||||||||||| Sbjct: 43493 tgacagagacatttttctctggaac 43469
>emb|AL731801.11| Mouse DNA sequence from clone RP23-181L15 on chromosome X, complete sequence Length = 197346 Score = 42.1 bits (21), Expect = 6.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 569 acagaaacatttttctctggaacat 593 |||||||||||||||||| |||||| Sbjct: 26544 acagaaacatttttctctagaacat 26520
>emb|X05232.1|HSSTROMR Human mRNA for stromelysin Length = 1801 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 742 atgaagagatcaaatgcaatt 762 ||||||||||||||||||||| Sbjct: 1037 atgaagagatcaaatgcaatt 1017
>gb|J03209.1|HUMMMP3A Human matrix metalloproteinase-3 (MMP-3) mRNA, complete cds Length = 1434 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 742 atgaagagatcaaatgcaatt 762 ||||||||||||||||||||| Sbjct: 994 atgaagagatcaaatgcaatt 974
>gb|AC126750.3| Homo sapiens chromosome 5 clone CTD-2055H2, complete sequence Length = 120765 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1156 gttgttttagaatctgtgaag 1176 ||||||||||||||||||||| Sbjct: 79836 gttgttttagaatctgtgaag 79816
>gb|AC122694.2| Homo sapiens chromosome 5 clone CTD-2013M15, complete sequence Length = 145789 Score = 42.1 bits (21), Expect = 6.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1156 gttgttttagaatctgtgaag 1176 ||||||||||||||||||||| Sbjct: 140401 gttgttttagaatctgtgaag 140421 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 283,185,161 Number of extensions: 14770322 Number of successful extensions: 273101 Number of sequences better than 10.0: 91 Number of HSP's gapped: 273088 Number of HSP's successfully gapped: 142 Length of query: 1611 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1588 Effective length of database: 18,503,978,556 Effective search space: 29384317946928 Effective search space used: 29384317946928 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
