ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf96f18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK062871:Os06g0484600 | 78 | 6e-15 | 2 | AK059646:Os03g0219500 | 49 | 4e-06 | 3 | AK106363:Os09g0270900 | 45 | 4e-05 | 4 | Os01g0866600:Os01g0866600 | 40 | 0.002 | 5 | AK067198:Os01g0767900 | 30 | 2.3 | 6 | AK060082:Os07g0162400 | 30 | 2.3 | 7 | AK120927:Os02g0471500 | 29 | 3.9 | 8 | AK120615:Os02g0471500 | 29 | 3.9 | 9 | AK073027:Os06g0139000 | 29 | 3.9 | 10 | AK068093:Os01g0571100 | 29 | 3.9 | 11 | Y07955:Os01g0372500 | 28 | 6.6 | 12 | AK119470:Os06g0138700 | 28 | 6.6 | 13 | AK101287:Os05g0578900 | 28 | 6.6 | 14 | AK073464:Os05g0578900 | 28 | 6.6 | 15 | AK068725:Os04g0437600 | 28 | 6.6 | 16 | Os01g0639200:Os01g0639200 | 28 | 8.6 |
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>AK062871:Os06g0484600 | Length = 183 Score = 78.2 bits (191), Expect = 6e-15 Identities = 36/56 (64%), Positives = 42/56 (75%) Frame = +3 Query: 366 HRRRCLRGWPPRLHRRGFEGV*GEIRCEQAENGLQGYMGGASEHRACCGPNDHQDA 533 HRRR + PP LHR F+G+ E+ + AENGLQGYMGGA +HRACCGPND QDA Sbjct: 127 HRRRHIWRRPPCLHRCSFQGIRREVCRKSAENGLQGYMGGAPKHRACCGPNDDQDA 182
>AK059646:Os03g0219500 | Length = 102 Score = 48.9 bits (115), Expect = 4e-06 Identities = 29/76 (38%), Positives = 43/76 (56%) Frame = +1 Query: 316 AQSLETKIKEQLEADHVTVVDASGDGRHVCIDVVSKAFEGKSAVNRQRMVYKVIWEELQS 495 A +L+ + A H V D + + H I V+S FEG+S V R RMVY ++ +EL S Sbjct: 27 ASALDIEDVSYQHAGHAAVKDNANE-THFNIRVISPKFEGQSLVKRHRMVYDLLTDELNS 85 Query: 496 TVHAVDQMTTKTPGEA 543 +HA+ + KTP E+ Sbjct: 86 GLHAI-SIVAKTPKES 100
>AK106363:Os09g0270900 | Length = 366 Score = 45.4 bits (106), Expect = 4e-05 Identities = 25/64 (39%), Positives = 40/64 (62%) Frame = +1 Query: 349 LEADHVTVVDASGDGRHVCIDVVSKAFEGKSAVNRQRMVYKVIWEELQSTVHAVDQMTTK 528 L H V ++G+ H + VVS+AF+GKS + R R VY ++ +EL++ +HA+ + K Sbjct: 304 LHKGHAGVSGSNGE-THFNVRVVSEAFQGKSLLKRHRAVYDLLQDELKNGLHAL-SIDAK 361 Query: 529 TPGE 540 TP E Sbjct: 362 TPSE 365
>Os01g0866600:Os01g0866600 | Length = 94 Score = 40.0 bits (92), Expect = 0.002 Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 1/76 (1%) Frame = +1 Query: 319 QSLETKIKEQLEADHVTVVDASGD-GRHVCIDVVSKAFEGKSAVNRQRMVYKVIWEELQS 495 + +E I L + V D SG G I+VVS+ FEGK + R RMV + + + Sbjct: 6 EDVEAAITSSLSPSSLVVTDTSGGCGASYEIEVVSEKFEGKRLLERHRMVNTALAPHM-A 64 Query: 496 TVHAVDQMTTKTPGEA 543 +HAV TP +A Sbjct: 65 EIHAVSIKKALTPAQA 80
>AK067198:Os01g0767900 | Length = 635 Score = 29.6 bits (65), Expect = 2.3 Identities = 21/53 (39%), Positives = 31/53 (58%) Frame = -1 Query: 383 EASTTVTWSASSCSLILVSRDCAMAEPVGPAGPGADAQAEKPPVRALPGRGGG 225 E S+++T ++SS L S C+++ + P G GA A A+ PV A G GGG Sbjct: 13 EPSSSITIASSSSYLSNGSSPCSVS--LAPPGAGAVA-AQAAPVAAGEGGGGG 62
>AK060082:Os07g0162400 | Length = 327 Score = 29.6 bits (65), Expect = 2.3 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Frame = -1 Query: 434 PSNAFETTSMQTWRPSPEASTTVTWSASSCSLIL---VSRDCAMAEPVGPAGPGADAQAE 264 P+ A ET + P A T S LIL +RD + P GP PG +A A Sbjct: 196 PAMAGETRTRAELECRPGAFLTAEMSDRYARLILPGGATRDYPVLNPAGPEAPGLEAVAM 255 Query: 263 KP 258 P Sbjct: 256 AP 257
>AK120927:Os02g0471500 | Length = 518 Score = 28.9 bits (63), Expect = 3.9 Identities = 19/49 (38%), Positives = 26/49 (53%) Frame = -1 Query: 368 VTWSASSCSLILVSRDCAMAEPVGPAGPGADAQAEKPPVRALPGRGGGD 222 VTW+A++ R A P GPA PGAD + +R +PGR G+ Sbjct: 78 VTWAAAARPQRQQPRLAAQT-PRGPA-PGADGRRAAAELRGIPGRIAGN 124
>AK120615:Os02g0471500 | Length = 518 Score = 28.9 bits (63), Expect = 3.9 Identities = 19/49 (38%), Positives = 26/49 (53%) Frame = -1 Query: 368 VTWSASSCSLILVSRDCAMAEPVGPAGPGADAQAEKPPVRALPGRGGGD 222 VTW+A++ R A P GPA PGAD + +R +PGR G+ Sbjct: 78 VTWAAAARPQRQQPRLAAQT-PRGPA-PGADGRRAAAELRGIPGRIAGN 124
>AK073027:Os06g0139000 | Length = 446 Score = 28.9 bits (63), Expect = 3.9 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -3 Query: 477 YNLVNHSLPVHSGFPLKRLRNHVYAD 400 Y+ VNH L HSG +K+L VY+D Sbjct: 50 YSKVNHILKRHSGIGVKKLTIKVYSD 75
>AK068093:Os01g0571100 | Length = 158 Score = 28.9 bits (63), Expect = 3.9 Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 8/97 (8%) Frame = +1 Query: 409 DVVSKAFEGKSAVNRQR--MVYKVIWEELQSTVHAVDQM------TTKTPGEAAGN**SR 564 + +A EG SA + +V + + EE+Q+ V AV Q +TP EAA + Sbjct: 57 ETAKRADEGASASKSEDSGVVVQAV-EEIQAVVTAVQQQLHTEGAAAETPNEAAA---AE 112 Query: 565 SAWEKFNLER**TVVHQDPATARIDMKTFFCRLHFSC 675 ++ E E V +D + R+D K FF + C Sbjct: 113 TSAEGEKPEESKRDVEKDDPSKRLDFKGFFAMIFERC 149
>Y07955:Os01g0372500 | Length = 375 Score = 28.1 bits (61), Expect = 6.6 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = +1 Query: 364 VTVVDASGDGRHVCIDVVSKAFE 432 ++ D GDGRH C++ V A E Sbjct: 57 ISAFDNDGDGRHACVEAVRAAAE 79
>AK119470:Os06g0138700 | Length = 445 Score = 28.1 bits (61), Expect = 6.6 Identities = 11/26 (42%), Positives = 18/26 (69%) Frame = -3 Query: 477 YNLVNHSLPVHSGFPLKRLRNHVYAD 400 Y+ V+H L HSG +K+L+ +Y+D Sbjct: 123 YSKVDHILKRHSGIGVKKLKIQIYSD 148
>AK101287:Os05g0578900 | Length = 279 Score = 28.1 bits (61), Expect = 6.6 Identities = 19/58 (32%), Positives = 28/58 (48%) Frame = -1 Query: 431 SNAFETTSMQTWRPSPEASTTVTWSASSCSLILVSRDCAMAEPVGPAGPGADAQAEKP 258 S A++ S T PS +S++ + C+L L + AEPV A P A+ A P Sbjct: 50 SAAYDDHSTVTTSPSSPSSSST--GSVDCTLSLGTPSSRRAEPVAAAAPAANHGAPVP 105
>AK073464:Os05g0578900 | Length = 279 Score = 28.1 bits (61), Expect = 6.6 Identities = 19/58 (32%), Positives = 28/58 (48%) Frame = -1 Query: 431 SNAFETTSMQTWRPSPEASTTVTWSASSCSLILVSRDCAMAEPVGPAGPGADAQAEKP 258 S A++ S T PS +S++ + C+L L + AEPV A P A+ A P Sbjct: 50 SAAYDDHSTVTTSPSSPSSSST--GSVDCTLSLGTPSSRRAEPVAAAAPAANHGAPVP 105
>AK068725:Os04g0437600 | Length = 708 Score = 28.1 bits (61), Expect = 6.6 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = -1 Query: 305 PVGPAGPGADAQAEKPPVRALPGR 234 PVG AGPG Q ++P + P R Sbjct: 86 PVGDAGPGGQGQGQEPELEPAPVR 109
>Os01g0639200:Os01g0639200 | Length = 379 Score = 27.7 bits (60), Expect = 8.6 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Frame = +1 Query: 325 LETKIKEQLEADHVTVVDASGD----GRHVCIDVVSKAFEGKSAVNRQ 456 L T E + HV V +A GD GR++C D V K E + + RQ Sbjct: 281 LATASVETVAEAHVRVYEAMGDNTAGGRYICYDHVVKRPEEFAELERQ 328 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 16,877,001 Number of extensions: 390559 Number of successful extensions: 1274 Number of sequences better than 10.0: 16 Number of HSP's gapped: 1273 Number of HSP's successfully gapped: 16 Length of query: 247 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 149 Effective length of database: 11,475,837 Effective search space: 1709899713 Effective search space used: 1709899713 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
