>Q84W65:SUFE_ARATH SufE-like protein, chloroplast precursor - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 371
 Score = 49.7 bits (117), Expect = 1e-05
 Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
 Frame = +1

Query: 325 LETKIKEQLEADHVTVVDASGDG--RHVCIDVVSKAFEGKSAVNRQRMVYKVIWEELQST 498
           LE +      A H  V  ++GD    H  + +VS AF+GKS V R R++Y ++ +EL+S 
Sbjct: 298 LEVEDVSYQHAGHAAVRGSAGDDGETHFNLRIVSDAFQGKSLVKRHRLIYDLLQDELKSG 357

Query: 499 VHAVDQMTTKTPGE 540
           +HA+  +  KTP E
Sbjct: 358 LHAL-SIVAKTPAE 370

>P0ABE4:BOLA_SHIFL Protein bolA - Shigella flexneri|
          Length = 105

 Score = 44.7 bits (104), Expect = 4e-04
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
 Frame = +1

Query: 313 IAQSLETKIKEQLEADHVTVVDAS-------GDGRHVCIDVVSKAFEGKSAVNRQRMVYK 471
           I + +E K++   +   + VVD S       G   H  + +VS  F G+  +NR RM+Y 
Sbjct: 3   IRERIEEKLRAAFQPVFLEVVDESYRHNVPAGSESHFKVVLVSDRFTGERFLNRHRMIYS 62

Query: 472 VIWEELQSTVHAV 510
            + EEL +TVHA+
Sbjct: 63  TLAEELSTTVHAL 75

>P0ABE2:BOLA_ECOLI Protein bolA - Escherichia coli|
          Length = 105

 Score = 44.7 bits (104), Expect = 4e-04
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
 Frame = +1

Query: 313 IAQSLETKIKEQLEADHVTVVDAS-------GDGRHVCIDVVSKAFEGKSAVNRQRMVYK 471
           I + +E K++   +   + VVD S       G   H  + +VS  F G+  +NR RM+Y 
Sbjct: 3   IRERIEEKLRAAFQPVFLEVVDESYRHNVPAGSESHFKVVLVSDRFTGERFLNRHRMIYS 62

Query: 472 VIWEELQSTVHAV 510
            + EEL +TVHA+
Sbjct: 63  TLAEELSTTVHAL 75

>P0ABE3:BOLA_ECOL6 Protein bolA - Escherichia coli O6|
          Length = 105

 Score = 44.7 bits (104), Expect = 4e-04
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
 Frame = +1

Query: 313 IAQSLETKIKEQLEADHVTVVDAS-------GDGRHVCIDVVSKAFEGKSAVNRQRMVYK 471
           I + +E K++   +   + VVD S       G   H  + +VS  F G+  +NR RM+Y 
Sbjct: 3   IRERIEEKLRAAFQPVFLEVVDESYRHNVPAGSESHFKVVLVSDRFTGERFLNRHRMIYS 62

Query: 472 VIWEELQSTVHAV 510
            + EEL +TVHA+
Sbjct: 63  TLAEELSTTVHAL 75

>Q8BGS2:BOLA2_MOUSE BolA-like protein 2 - Mus musculus (Mouse)|
          Length = 86

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
 Frame = +1

Query: 316 AQSLETKIKEQLEADHVTVVDASGD--GRHVCIDVVSKAFEGKSAVNRQRMVYKVIWEEL 489
           A  L  K+++ LEA+HV V D + +       + VVS  FEGK  + R R+V + + EEL
Sbjct: 5   ADYLREKLRQDLEAEHVEVEDTTLNRCATSFRVLVVSAKFEGKPLLQRHRLVNECLAEEL 64

Query: 490 QSTVHAVDQMT 522
              +HA +Q T
Sbjct: 65  PH-IHAFEQKT 74

>Q9H3K6:BOLA2_HUMAN BolA-like protein 2 - Homo sapiens (Human)|
          Length = 86

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
 Frame = +1

Query: 316 AQSLETKIKEQLEADHVTVVDASGDGRHVC---IDVVSKAFEGKSAVNRQRMVYKVIWEE 486
           A+ L  K++  LEA+HV V D + + R  C   + VVS  FEGK  + R R+V   + EE
Sbjct: 5   AEYLREKLQRDLEAEHVEVEDTTLN-RCSCSFRVLVVSAKFEGKPLLQRHRLVNACLAEE 63

Query: 487 LQSTVHAVDQMTTKTPGEAA 546
           L   +HA +Q T  TP + A
Sbjct: 64  LPH-IHAFEQKTL-TPDQWA 81

>Q9ZCE4:Y812_RICPR Uncharacterized protein RP812 - Rickettsia prowazekii|
          Length = 77

 Score = 40.8 bits (94), Expect = 0.006
 Identities = 18/73 (24%), Positives = 35/73 (47%)
 Frame = +1

Query: 316 AQSLETKIKEQLEADHVTVVDASGDGRHVCIDVVSKAFEGKSAVNRQRMVYKVIWEELQS 495
           A+ LE  +K+   +  + + D  GD  H  +++    F G S +N+ ++V   + E L  
Sbjct: 5   AEELEKILKKSFPSSVIKITDLVGDQDHYALEISDAQFNGLSLINQHKLVKNALSEILNK 64

Query: 496 TVHAVDQMTTKTP 534
            +H++   T   P
Sbjct: 65  KLHSISIKTISIP 77

>Q56585:BOLA_VIBAL Protein bolA homolog - Vibrio alginolyticus|
          Length = 102

 Score = 40.8 bits (94), Expect = 0.006
 Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
 Frame = +1

Query: 313 IAQSLETKIKEQLEADHVTVVDAS-------GDGRHVCIDVVSKAFEGKSAVNRQRMVYK 471
           I + +E K+  +L+  ++ V++ S       G   H  + VVS +F G+  + R R V++
Sbjct: 2   IQEIIEKKLHSELQPSYLKVINESYMHNVPPGSESHFKVIVVSDSFAGQRLIGRHRQVHQ 61

Query: 472 VIWEELQSTVHAV 510
           ++ +EL + +HA+
Sbjct: 62  ILADELDNHIHAL 74

>Q12238:UVI31_SCHPO UV-induced protein uvi31 - Schizosaccharomyces pombe (Fission|
           yeast)
          Length = 102

 Score = 40.4 bits (93), Expect = 0.007
 Identities = 18/50 (36%), Positives = 30/50 (60%)
 Frame = +1

Query: 397 HVCIDVVSKAFEGKSAVNRQRMVYKVIWEELQSTVHAVDQMTTKTPGEAA 546
           H  +++VS  F G S V R R+VY ++ +E    +HA+   ++KTP E +
Sbjct: 53  HFRLEIVSPEFSGMSRVARHRLVYGLLKDEFDGGLHALQITSSKTPDEVS 102

>Q9D8S9:BOLA1_MOUSE BolA-like protein 1 - Mus musculus (Mouse)|
          Length = 137

 Score = 40.4 bits (93), Expect = 0.007
 Identities = 21/53 (39%), Positives = 31/53 (58%)
 Frame = +1

Query: 382 SGDGRHVCIDVVSKAFEGKSAVNRQRMVYKVIWEELQSTVHAVDQMTTKTPGE 540
           +G   H  + VVS  FEG S + R R+V++ + EEL   VHA+  +  KTP +
Sbjct: 62  AGSETHFRVAVVSSRFEGMSPLQRHRLVHEALSEELAGPVHAL-AIQAKTPAQ 113

>P91375:YN1I_CAEEL Putative bolA-like protein K11H12.1 - Caenorhabditis elegans|
          Length = 108

 Score = 40.0 bits (92), Expect = 0.009
 Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
 Frame = +1

Query: 313 IAQSLETKIKEQLEADHVTVVDAS-------GDGRHVCIDVVSKAFEGKSAVNRQRMVYK 471
           +A+ L+ K+    +  H+ V   S       G  +H  + VVS  FEGK  + R R+V  
Sbjct: 9   VARLLKEKLFAAFQPKHLEVECESHLHNVPKGAEKHFRVQVVSDEFEGKRVIERHRLVNT 68

Query: 472 VIWEELQSTVHAV 510
            + +EL +TVHA+
Sbjct: 69  CLAKELATTVHAL 81

>Q9Y3E2:BOLA1_HUMAN BolA-like protein 1 - Homo sapiens (Human)|
          Length = 137

 Score = 40.0 bits (92), Expect = 0.009
 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
 Frame = +1

Query: 313 IAQSLETKIKEQLEADHVTVVDASG-------DGRHVCIDVVSKAFEGKSAVNRQRMVYK 471
           +  ++ TK++E L  + + + + SG          H  + VVS  FEG S + R R+V+ 
Sbjct: 32  VEAAIRTKLEEALSPEVLELRNESGGHAVPPGSETHFRVAVVSSRFEGLSPLQRHRLVHA 91

Query: 472 VIWEELQSTVHAVDQMTTKTPGE 540
            + EEL   VHA+  +  +TP +
Sbjct: 92  ALAEELGGPVHAL-AIQARTPAQ 113

>Q5RCE5:BOLA1_PONPY BolA-like protein 1 - Pongo pygmaeus (Orangutan)|
          Length = 137

 Score = 39.3 bits (90), Expect = 0.016
 Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
 Frame = +1

Query: 313 IAQSLETKIKEQLEADHVTVVDASG-------DGRHVCIDVVSKAFEGKSAVNRQRMVYK 471
           +  ++ TK+++ L  + + + + SG          H  + VVS  FEG S + R R+++ 
Sbjct: 32  VEAAIRTKLEQALSPEVLELRNESGGHAVPPGSETHFRVAVVSSRFEGLSPLQRHRLIHA 91

Query: 472 VIWEELQSTVHAVDQMTTKTPGEAAGN 552
            + EEL   VHA+  +  +TP +   N
Sbjct: 92  ALAEELAGPVHAL-AIQARTPAQWGEN 117

>Q3T138:BOLA1_BOVIN BolA-like protein 1 - Bos taurus (Bovine)|
          Length = 135

 Score = 39.3 bits (90), Expect = 0.016
 Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
 Frame = +1

Query: 313 IAQSLETKIKEQLEADHVTVVDASG-------DGRHVCIDVVSKAFEGKSAVNRQRMVYK 471
           +  ++ TK+++ L  + + + + SG          H  + VVS  FEG S + R R+V+ 
Sbjct: 32  VEAAIRTKLEQALNPEVLELRNESGGHAVPPGSETHFRVAVVSSRFEGLSPLQRHRLVHA 91

Query: 472 VIWEELQSTVHAVDQMTTKTPGE 540
            + EEL   VHA+  +  +TP +
Sbjct: 92  ALSEELAGPVHAL-AIQARTPAQ 113

>P53082:YGX0_YEAST Uncharacterized bolA-like protein YGL220W - Saccharomyces|
           cerevisiae (Baker's yeast)
          Length = 120

 Score = 38.5 bits (88), Expect = 0.028
 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
 Frame = +1

Query: 319 QSLETKIKEQL-EADHVTVVDAS-GDGRHVCIDVVSKAFEGKSAVNRQRMVYKVIWEELQ 492
           Q L  +I+  + +  H+ V D S G G+   I VVS  F+GKS + R R V K + EELQ
Sbjct: 41  QGLRERIESAIPQVYHIIVTDLSYGCGQSFDIVVVSDFFQGKSKLMRSRAVNKAVKEELQ 100

Query: 493 STVHA 507
             +HA
Sbjct: 101 E-IHA 104

>Q3E793:YA044_YEAST Uncharacterized bolA-like protein YAL044W-A - Saccharomyces|
           cerevisiae (Baker's yeast)
          Length = 110

 Score = 38.5 bits (88), Expect = 0.028
 Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
 Frame = +1

Query: 397 HVCIDVVSKAFEGKSAVNRQRMVYKVIWEELQST--VHAVDQMTTKTPGE 540
           H  I++VSK FEG     R RMVY ++ +E+     +HA+ Q++ KTP E
Sbjct: 56  HFRIEMVSKKFEGLKLPQRHRMVYSLLQDEMAQANGIHAL-QLSLKTPQE 104

>P73055:Y3122_SYNY3 Uncharacterized protein ssr3122 - Synechocystis sp. (strain PCC|
           6803)
          Length = 85

 Score = 38.5 bits (88), Expect = 0.028
 Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
 Frame = +1

Query: 334 KIKEQLEA---DHVTVVDASGDGRHVCIDVVSKAFEGKSAVNRQRMVYKVIWEELQS-TV 501
           ++K+Q++A   D   +V+  G G H+   VVS AF G+S V + +MVY  + + L S  +
Sbjct: 6   QVKQQIQAALPDAEVMVNDLGGGDHLEAVVVSSAFTGQSRVKQHQMVYGALKDALASEAI 65

Query: 502 HAVDQMTTKTP 534
           HA+  + T TP
Sbjct: 66  HAL-ALKTFTP 75

>Q89AF0:Y348_BUCBP Uncharacterized protein bbp_348 - Buchnera aphidicola subsp.|
           Baizongia pistaciae
          Length = 79

 Score = 38.1 bits (87), Expect = 0.036
 Identities = 19/71 (26%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
 Frame = +1

Query: 313 IAQSLETKIKEQLEADHVTVVDASGDGRHVCIDVVSKAFEGKSAVNRQRMVYKVIWEE-L 489
           I  ++++ +K+++    +TV+  +GD +H+ I  VS  F   + + RQ+++YK +    +
Sbjct: 3   ITNTIKSLLKKKIP---LTVIHVTGDNKHINITAVSDIFNNINTLRRQQIIYKPLMPYII 59

Query: 490 QSTVHAVDQMT 522
             T+HA+   T
Sbjct: 60  NKTLHAISIKT 70

>P0A9W8:YRBA_SHIFL Uncharacterized protein yrbA - Shigella flexneri|
          Length = 84

 Score = 36.6 bits (83), Expect = 0.10
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +1

Query: 373 VDASGDGRHVCIDVVSKAFEGKSAVNRQRMVYKVIWEEL-QSTVHAVDQMTTKTPGEAA 546
           V  SGDG H  +  V + F+G S V +Q+ VY  + E +  + +HAV  +   TP E A
Sbjct: 19  VHVSGDGSHFQVIAVGELFDGMSRVKKQQTVYGPLMEYIADNRIHAV-SIKAYTPAEWA 76

>P0A9W6:YRBA_ECOLI Uncharacterized protein yrbA - Escherichia coli|
          Length = 84

 Score = 36.6 bits (83), Expect = 0.10
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +1

Query: 373 VDASGDGRHVCIDVVSKAFEGKSAVNRQRMVYKVIWEEL-QSTVHAVDQMTTKTPGEAA 546
           V  SGDG H  +  V + F+G S V +Q+ VY  + E +  + +HAV  +   TP E A
Sbjct: 19  VHVSGDGSHFQVIAVGELFDGMSRVKKQQTVYGPLMEYIADNRIHAV-SIKAYTPAEWA 76

>P0A9W7:YRBA_ECOL6 Uncharacterized protein yrbA - Escherichia coli O6|
          Length = 84

 Score = 36.6 bits (83), Expect = 0.10
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +1

Query: 373 VDASGDGRHVCIDVVSKAFEGKSAVNRQRMVYKVIWEEL-QSTVHAVDQMTTKTPGEAA 546
           V  SGDG H  +  V + F+G S V +Q+ VY  + E +  + +HAV  +   TP E A
Sbjct: 19  VHVSGDGSHFQVIAVGELFDGMSRVKKQQTVYGPLMEYIADNRIHAV-SIKAYTPAEWA 76

>Q9KPS0:BOLA_VIBCH Protein bolA - Vibrio cholerae|
          Length = 106

 Score = 36.2 bits (82), Expect = 0.14
 Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
 Frame = +1

Query: 313 IAQSLETKIKEQLEADHVTVVDAS-------GDGRHVCIDVVSKAFEGKSAVNRQRMVYK 471
           I   +E K+ ++ + + + V++ S       G   H  + VVS+ F G   V R R+V +
Sbjct: 2   IQDVIEKKLSDEFQPEFLKVINESDMHNVPRGSESHFKVTVVSERFAGLRPVARHRLVNQ 61

Query: 472 VIWEELQSTVHAV 510
            + +EL + +HA+
Sbjct: 62  TLADELANHIHAL 74

>P43780:BOLA_HAEIN Protein bolA homolog - Haemophilus influenzae|
          Length = 103

 Score = 33.1 bits (74), Expect = 1.2
 Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
 Frame = +1

Query: 313 IAQSLETKIKEQLEADHVTVVDAS-------GDGRHVCIDVVSKAFEGKSAVNRQRMVYK 471
           I Q +E KI+++ +   + + + S       G   H    +VS  F+    V R + +Y+
Sbjct: 3   IQQIIEQKIQKEFQPHFLAIENESHLHHSNRGSESHFKCVIVSADFKNIRKVQRHQRIYQ 62

Query: 472 VIWEELQSTVHAV 510
           ++ EEL  ++HA+
Sbjct: 63  LLNEELNHSIHAL 75

>Q00PI9:HNRL2_MOUSE Heterogeneous nuclear ribonucleoprotein U-like protein 2 - Mus|
           musculus (Mouse)
          Length = 745

 Score = 30.8 bits (68), Expect = 5.7
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = -1

Query: 302 VGPAGPGADAQAEKPPVRALPGRGGGDQ 219
           VG AGPG   +AE  PV A  G  GGD+
Sbjct: 48  VGGAGPGGACKAEPRPVAASGGGPGGDE 75

>Q673L6:TERT_RAT Telomerase reverse transcriptase - Rattus norvegicus (Rat)|
          Length = 1125

 Score = 30.4 bits (67), Expect = 7.5
 Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 13/82 (15%)
 Frame = -1

Query: 416 TTSMQTWRPSPEASTTVTWSASSCSLILVSRD-------CAMAEPVGP---AGPGADAQA 267
           T S +TW PSP AS  V  +A + SL   + D       C   +P      + P  DA+ 
Sbjct: 266 TPSGKTWAPSPAASPKVPPAAKNLSLKGKASDPSLSGSVCCKHKPSSSSLLSSPPQDAEK 325

Query: 266 EKPPVRA---LPGRGGGDQVVN 210
            +P       L  RGGG + +N
Sbjct: 326 LRPFTETRHFLYSRGGGQEELN 347

>P22063:CNTN2_RAT Contactin-2 precursor - Rattus norvegicus (Rat)|
          Length = 1040

 Score = 30.4 bits (67), Expect = 7.5
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = -1

Query: 299 GPAGPGADAQAEKPPVRALPG 237
           GPA P ADA   KPP R  PG
Sbjct: 899 GPASPSADAMTVKPPPRRPPG 919

>Q61330:CNTN2_MOUSE Contactin-2 precursor - Mus musculus (Mouse)|
          Length = 1040

 Score = 30.4 bits (67), Expect = 7.5
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = -1

Query: 299 GPAGPGADAQAEKPPVRALPG 237
           GPA P ADA   KPP R  PG
Sbjct: 899 GPASPSADAMTMKPPPRRPPG 919

>O00268:TAF4_HUMAN Transcription initiation factor TFIID subunit 4 - Homo sapiens|
           (Human)
          Length = 1085

 Score = 30.0 bits (66), Expect = 9.8
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = -1

Query: 395 RPSPEASTTVTWSASSCSLILVSRDCAMAEPVGPAGPGADAQAEKPPVRALPGRGGG 225
           RP PE S        + + +    + A A P  PAGP A A    P     PG G G
Sbjct: 127 RPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPG 183

>Q8BX46:LBXCO_MOUSE Ladybird homeobox corepressor 1 - Mus musculus (Mouse)|
          Length = 964

 Score = 30.0 bits (66), Expect = 9.8
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -1

Query: 317 AMAEPVGPAGPGADAQAEKPPVRALPGRGGG 225
           A + P GP GPG  A     PV  +P +G G
Sbjct: 351 AASGPAGPGGPGGSAGVRSYPVIPVPSKGFG 381


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 98,329,636
Number of extensions: 2146066
Number of successful extensions: 8192
Number of sequences better than 10.0: 29
Number of HSP's gapped: 8177
Number of HSP's successfully gapped: 29
Length of query: 247
Length of database: 100,686,439
Length adjustment: 110
Effective length of query: 137
Effective length of database: 70,513,989
Effective search space: 9660416493
Effective search space used: 9660416493
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)