ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf96f06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os02g0109100:Os02g0109100 234 e-143
2Os02g0107200:Os02g0107200 237 e-100
3Os02g0236500:Os02g0236500 31 2.5
4AK110733:Os09g0459200 30 5.5
5AK102616:Os03g0328900 29 7.1

>Os02g0109100:Os02g0109100 |
          Length = 791
 Score =  234 bits (598), Expect(4) = e-143
 Identities = 112/125 (89%), Positives = 118/125 (94%)
 Frame = +3

Query: 30  MATEAEAQWVLTATGRSPTNIAVIKYWGKRDEALILPVNDSISVTLDPDHLSATTTVAAS 209
           MA   E QWVL ATGRSPTNIAVIKYWGKRDEALILPVNDSISVTLDPDHLSATTTVA S
Sbjct: 95  MAAAEEGQWVLMATGRSPTNIAVIKYWGKRDEALILPVNDSISVTLDPDHLSATTTVAVS 154

Query: 210 PAFPSDRMWLNGKEIALSGGRFQSCLREIRKRARDVEDEKKGIKVKKEDWEKLHVHIASY 389
           P+FPSDRMWLNGKEI+LSGGRFQSCLREIRKRA+DVEDEKKGI++KKEDW KLHVHIAS+
Sbjct: 155 PSFPSDRMWLNGKEISLSGGRFQSCLREIRKRAQDVEDEKKGIRIKKEDWGKLHVHIASF 214

Query: 390 NNFPT 404
           NNFPT
Sbjct: 215 NNFPT 219



 Score =  163 bits (413), Expect(4) = e-143
 Identities = 76/87 (87%), Positives = 82/87 (94%)
 Frame = +3

Query: 678 RLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISLVEKWNHAEGTPQVAYTFDAGPNAVLI 857
           RLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISLVEKWN +EGTPQVAYTFDAGPNAVLI
Sbjct: 356 RLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISLVEKWNQSEGTPQVAYTFDAGPNAVLI 415

Query: 858 ARNRKTASLVLQRLLYCFPPQENDLDR 938
           A NRK A+++LQ+LLY FPPQ+NDL R
Sbjct: 416 APNRKNATILLQKLLYYFPPQDNDLSR 442



 Score =  148 bits (374), Expect(4) = e-143
 Identities = 71/77 (92%), Positives = 76/77 (98%)
 Frame = +2

Query: 449 QGSGSACRSIYGGFVKWCMGKNDDGSDSMAVQLVDESHWDDLVIIIAVVSSKQKETSSTS 628
           QGSGSACRSIYGGFVKWCMGKN+DGSDS+AVQL DE+HW+DLVIIIAVVSSKQKETSSTS
Sbjct: 256 QGSGSACRSIYGGFVKWCMGKNNDGSDSIAVQLADEAHWNDLVIIIAVVSSKQKETSSTS 315

Query: 629 GMRDTVETSPLLQYRAQ 679
           GMRD+VETSPLLQYRAQ
Sbjct: 316 GMRDSVETSPLLQYRAQ 332



 Score = 26.6 bits (57), Expect(4) = e-143
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +2

Query: 1028 QLYGRR*INPK*RRSAILS*HRGPSTAPGDEVTEPKIQG 1144
            QLYG R ++ K   + I     GP ++  DE  EPKIQG
Sbjct: 451  QLYGWRQVDSKRCWTEIDRRCGGPPSSCRDEDAEPKIQG 489



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>Os02g0107200:Os02g0107200 |
          Length = 553

 Score =  237 bits (605), Expect(2) = e-100
 Identities = 116/133 (87%), Positives = 122/133 (91%)
 Frame = +3

Query: 6   AIPTFPTPMATEAEAQWVLTATGRSPTNIAVIKYWGKRDEALILPVNDSISVTLDPDHLS 185
           A   FP+ MA   E QWVL ATGRSPTNIAVIKYWGKRDEALILPVNDSISVTLDPDHLS
Sbjct: 308 AADRFPS-MAAAEEGQWVLMATGRSPTNIAVIKYWGKRDEALILPVNDSISVTLDPDHLS 366

Query: 186 ATTTVAASPAFPSDRMWLNGKEIALSGGRFQSCLREIRKRARDVEDEKKGIKVKKEDWEK 365
           ATTTVA SP+FPSDRMWLNGKEI+LSGGRFQSCLREIRKRA+DVEDEKKGI++KKEDW K
Sbjct: 367 ATTTVAVSPSFPSDRMWLNGKEISLSGGRFQSCLREIRKRAQDVEDEKKGIRIKKEDWGK 426

Query: 366 LHVHIASYNNFPT 404
           LHVHIASYNNFPT
Sbjct: 427 LHVHIASYNNFPT 439



 Score =  148 bits (374), Expect(2) = e-100
 Identities = 71/77 (92%), Positives = 76/77 (98%)
 Frame = +2

Query: 449 QGSGSACRSIYGGFVKWCMGKNDDGSDSMAVQLVDESHWDDLVIIIAVVSSKQKETSSTS 628
           QGSGSACRSIYGGFVKWCMGKN+DGSDS+AVQL DE+HW+DLVIIIAVVSSKQKETSSTS
Sbjct: 476 QGSGSACRSIYGGFVKWCMGKNNDGSDSIAVQLADEAHWNDLVIIIAVVSSKQKETSSTS 535

Query: 629 GMRDTVETSPLLQYRAQ 679
           GMRD+VETSPLLQYRAQ
Sbjct: 536 GMRDSVETSPLLQYRAQ 552



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>Os02g0236500:Os02g0236500 |
          Length = 1084

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
 Frame = +2

Query: 779  CGEVEPRGRNPTGCLHI*CWA*RC---PNSTKPQNSFACPSEA 898
            C    PRGR P     +     RC   P + +P++  ACPS A
Sbjct: 906  CSRARPRGRRPRRACAVCAARPRCPAAPTAARPRSQRACPSRA 948



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>AK110733:Os09g0459200 |
          Length = 157

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = +3

Query: 996  NMYTYDKHDHDS--YMVGDKSILSDAGVQSLADIEALPPPPEMKSPSQKFKGDVSY 1157
            NMY  + H H S  +M    S  SD  ++        PPPP  + P+ +  GD  +
Sbjct: 5    NMYNPEHHHHQSSSFMAPRISFSSDFALE--------PPPPAQQQPAVRAPGDADF 52



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>AK102616:Os03g0328900 |
          Length = 687

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +3

Query: 1041 GDKSILSDAGVQSLADIEALPPPPEMKSPSQKFKGDVSYFICSRPGAG 1184
            G +++L     Q+  ++  LPPPP   S S       S F+ SR  +G
Sbjct: 45   GPEALLHSVMAQARKELALLPPPPPPSSSSPTVPAAHSPFLLSRQNSG 92


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 41,827,831
Number of extensions: 1016285
Number of successful extensions: 3122
Number of sequences better than 10.0: 5
Number of HSP's gapped: 3119
Number of HSP's successfully gapped: 9
Length of query: 472
Length of database: 15,399,855
Length adjustment: 104
Effective length of query: 368
Effective length of database: 11,235,591
Effective search space: 4134697488
Effective search space used: 4134697488
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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