Clone Name | FLbaf96f06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | Os02g0109100:Os02g0109100 | 234 | e-143 | 2 | Os02g0107200:Os02g0107200 | 237 | e-100 | 3 | Os02g0236500:Os02g0236500 | 31 | 2.5 | 4 | AK110733:Os09g0459200 | 30 | 5.5 | 5 | AK102616:Os03g0328900 | 29 | 7.1 |
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>Os02g0109100:Os02g0109100 | Length = 791 Score = 234 bits (598), Expect(4) = e-143 Identities = 112/125 (89%), Positives = 118/125 (94%) Frame = +3 Query: 30 MATEAEAQWVLTATGRSPTNIAVIKYWGKRDEALILPVNDSISVTLDPDHLSATTTVAAS 209 MA E QWVL ATGRSPTNIAVIKYWGKRDEALILPVNDSISVTLDPDHLSATTTVA S Sbjct: 95 MAAAEEGQWVLMATGRSPTNIAVIKYWGKRDEALILPVNDSISVTLDPDHLSATTTVAVS 154 Query: 210 PAFPSDRMWLNGKEIALSGGRFQSCLREIRKRARDVEDEKKGIKVKKEDWEKLHVHIASY 389 P+FPSDRMWLNGKEI+LSGGRFQSCLREIRKRA+DVEDEKKGI++KKEDW KLHVHIAS+ Sbjct: 155 PSFPSDRMWLNGKEISLSGGRFQSCLREIRKRAQDVEDEKKGIRIKKEDWGKLHVHIASF 214 Query: 390 NNFPT 404 NNFPT Sbjct: 215 NNFPT 219 Score = 163 bits (413), Expect(4) = e-143 Identities = 76/87 (87%), Positives = 82/87 (94%) Frame = +3 Query: 678 RLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISLVEKWNHAEGTPQVAYTFDAGPNAVLI 857 RLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISLVEKWN +EGTPQVAYTFDAGPNAVLI Sbjct: 356 RLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISLVEKWNQSEGTPQVAYTFDAGPNAVLI 415 Query: 858 ARNRKTASLVLQRLLYCFPPQENDLDR 938 A NRK A+++LQ+LLY FPPQ+NDL R Sbjct: 416 APNRKNATILLQKLLYYFPPQDNDLSR 442 Score = 148 bits (374), Expect(4) = e-143 Identities = 71/77 (92%), Positives = 76/77 (98%) Frame = +2 Query: 449 QGSGSACRSIYGGFVKWCMGKNDDGSDSMAVQLVDESHWDDLVIIIAVVSSKQKETSSTS 628 QGSGSACRSIYGGFVKWCMGKN+DGSDS+AVQL DE+HW+DLVIIIAVVSSKQKETSSTS Sbjct: 256 QGSGSACRSIYGGFVKWCMGKNNDGSDSIAVQLADEAHWNDLVIIIAVVSSKQKETSSTS 315 Query: 629 GMRDTVETSPLLQYRAQ 679 GMRD+VETSPLLQYRAQ Sbjct: 316 GMRDSVETSPLLQYRAQ 332 Score = 26.6 bits (57), Expect(4) = e-143 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = +2 Query: 1028 QLYGRR*INPK*RRSAILS*HRGPSTAPGDEVTEPKIQG 1144 QLYG R ++ K + I GP ++ DE EPKIQG Sbjct: 451 QLYGWRQVDSKRCWTEIDRRCGGPPSSCRDEDAEPKIQG 489
>Os02g0107200:Os02g0107200 | Length = 553 Score = 237 bits (605), Expect(2) = e-100 Identities = 116/133 (87%), Positives = 122/133 (91%) Frame = +3 Query: 6 AIPTFPTPMATEAEAQWVLTATGRSPTNIAVIKYWGKRDEALILPVNDSISVTLDPDHLS 185 A FP+ MA E QWVL ATGRSPTNIAVIKYWGKRDEALILPVNDSISVTLDPDHLS Sbjct: 308 AADRFPS-MAAAEEGQWVLMATGRSPTNIAVIKYWGKRDEALILPVNDSISVTLDPDHLS 366 Query: 186 ATTTVAASPAFPSDRMWLNGKEIALSGGRFQSCLREIRKRARDVEDEKKGIKVKKEDWEK 365 ATTTVA SP+FPSDRMWLNGKEI+LSGGRFQSCLREIRKRA+DVEDEKKGI++KKEDW K Sbjct: 367 ATTTVAVSPSFPSDRMWLNGKEISLSGGRFQSCLREIRKRAQDVEDEKKGIRIKKEDWGK 426 Query: 366 LHVHIASYNNFPT 404 LHVHIASYNNFPT Sbjct: 427 LHVHIASYNNFPT 439 Score = 148 bits (374), Expect(2) = e-100 Identities = 71/77 (92%), Positives = 76/77 (98%) Frame = +2 Query: 449 QGSGSACRSIYGGFVKWCMGKNDDGSDSMAVQLVDESHWDDLVIIIAVVSSKQKETSSTS 628 QGSGSACRSIYGGFVKWCMGKN+DGSDS+AVQL DE+HW+DLVIIIAVVSSKQKETSSTS Sbjct: 476 QGSGSACRSIYGGFVKWCMGKNNDGSDSIAVQLADEAHWNDLVIIIAVVSSKQKETSSTS 535 Query: 629 GMRDTVETSPLLQYRAQ 679 GMRD+VETSPLLQYRAQ Sbjct: 536 GMRDSVETSPLLQYRAQ 552
>Os02g0236500:Os02g0236500 | Length = 1084 Score = 30.8 bits (68), Expect = 2.5 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 3/43 (6%) Frame = +2 Query: 779 CGEVEPRGRNPTGCLHI*CWA*RC---PNSTKPQNSFACPSEA 898 C PRGR P + RC P + +P++ ACPS A Sbjct: 906 CSRARPRGRRPRRACAVCAARPRCPAAPTAARPRSQRACPSRA 948
>AK110733:Os09g0459200 | Length = 157 Score = 29.6 bits (65), Expect = 5.5 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Frame = +3 Query: 996 NMYTYDKHDHDS--YMVGDKSILSDAGVQSLADIEALPPPPEMKSPSQKFKGDVSY 1157 NMY + H H S +M S SD ++ PPPP + P+ + GD + Sbjct: 5 NMYNPEHHHHQSSSFMAPRISFSSDFALE--------PPPPAQQQPAVRAPGDADF 52
>AK102616:Os03g0328900 | Length = 687 Score = 29.3 bits (64), Expect = 7.1 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = +3 Query: 1041 GDKSILSDAGVQSLADIEALPPPPEMKSPSQKFKGDVSYFICSRPGAG 1184 G +++L Q+ ++ LPPPP S S S F+ SR +G Sbjct: 45 GPEALLHSVMAQARKELALLPPPPPPSSSSPTVPAAHSPFLLSRQNSG 92 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 41,827,831 Number of extensions: 1016285 Number of successful extensions: 3122 Number of sequences better than 10.0: 5 Number of HSP's gapped: 3119 Number of HSP's successfully gapped: 9 Length of query: 472 Length of database: 15,399,855 Length adjustment: 104 Effective length of query: 368 Effective length of database: 11,235,591 Effective search space: 4134697488 Effective search space used: 4134697488 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)