ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf96f06 |
|---|---|
| Clone Library Name | barley_pub |
>Q99JF5:ERG19_MOUSE Diphosphomevalonate decarboxylase - Mus musculus (Mouse)| Length = 401 Score = 120 bits (300), Expect(3) = 5e-70 Identities = 67/125 (53%), Positives = 81/125 (64%) Frame = +3 Query: 30 MATEAEAQWVLTATGRSPTNIAVIKYWGKRDEALILPVNDSISVTLDPDHLSATTTVAAS 209 MA+E ++T T +P NIAVIKYWGKRDEALILP+N S+SVTL D L TTTVA S Sbjct: 1 MASEKPQDLMVTCT--APVNIAVIKYWGKRDEALILPINSSLSVTLHQDQLKTTTTVAIS 58 Query: 210 PAFPSDRMWLNGKEIALSGGRFQSCLREIRKRARDVEDEKKGIKVKKEDWEKLHVHIASY 389 F DR+WLNG+E + R Q+CLREIR+ AR + G + K VH+AS Sbjct: 59 KDFTEDRIWLNGREEDVGQPRLQACLREIRRLARKRRSTEDGDTLPLSLSYK--VHVASV 116 Query: 390 NNFPT 404 NNFPT Sbjct: 117 NNFPT 121 Score = 96.3 bits (238), Expect(3) = 5e-70 Identities = 47/89 (52%), Positives = 66/89 (74%) Frame = +2 Query: 413 FGLFGCWLCLSWQGSGSACRSIYGGFVKWCMGKNDDGSDSMAVQLVDESHWDDLVIIIAV 592 +G+ G ++ +GSGSACRS+YGGFV+W MG+ DG DS+A Q+ E HW L I+I V Sbjct: 143 YGVEGDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQIAPEWHWPQLRILILV 202 Query: 593 VSSKQKETSSTSGMRDTVETSPLLQYRAQ 679 VS+ +K+T ST GM+ +VETS LL++RA+ Sbjct: 203 VSADKKQTGSTVGMQTSVETSTLLKFRAE 231 Score = 91.7 bits (226), Expect(3) = 5e-70 Identities = 46/83 (55%), Positives = 55/83 (66%) Frame = +3 Query: 678 RLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISLVEKWNHAEGTPQVAYTFDAGPNAVLI 857 +LT DSNQFHA CLDT PPI Y+NDTS RII LV ++N +G +VAYTFDAGPNAV+ Sbjct: 255 QLTMKDSNQFHATCLDTFPPISYLNDTSRRIIQLVHRFNTHQGQTKVAYTFDAGPNAVIF 314 Query: 858 ARNRKTASLVLQRLLYCFPPQEN 926 A V + + FPP N Sbjct: 315 TLEDTVAEFV-AAVRHSFPPAAN 336
>P53602:ERG19_HUMAN Diphosphomevalonate decarboxylase - Homo sapiens (Human)| Length = 400 Score = 111 bits (277), Expect(3) = 1e-66 Identities = 58/112 (51%), Positives = 70/112 (62%) Frame = +3 Query: 69 TGRSPTNIAVIKYWGKRDEALILPVNDSISVTLDPDHLSATTTVAASPAFPSDRMWLNGK 248 T +P NIAVIKYWGKRDE L+LP+N S+SVTL D L TTT S F DR+WLNG+ Sbjct: 11 TCTAPVNIAVIKYWGKRDEELVLPINSSLSVTLHQDQLKTTTTAVISKDFTEDRIWLNGR 70 Query: 249 EIALSGGRFQSCLREIRKRARDVEDEKKGIKVKKEDWEKLHVHIASYNNFPT 404 E + R Q+CLREIR AR + + G + VH+AS NNFPT Sbjct: 71 EEDVGQPRLQACLREIRCLARKRRNSRDGDPLPSS--LSCKVHVASVNNFPT 120 Score = 101 bits (252), Expect(3) = 1e-66 Identities = 47/77 (61%), Positives = 63/77 (81%) Frame = +2 Query: 449 QGSGSACRSIYGGFVKWCMGKNDDGSDSMAVQLVDESHWDDLVIIIAVVSSKQKETSSTS 628 +GSGSACRS+YGGFV+W MG+ DG DS+A Q+ ESHW +L ++I VVS+++K T ST Sbjct: 154 RGSGSACRSLYGGFVEWQMGEQADGKDSIARQVAPESHWPELRVLILVVSAEKKLTGSTV 213 Query: 629 GMRDTVETSPLLQYRAQ 679 GMR +VETSPLL++RA+ Sbjct: 214 GMRASVETSPLLRFRAE 230 Score = 84.0 bits (206), Expect(3) = 1e-66 Identities = 44/83 (53%), Positives = 53/83 (63%) Frame = +3 Query: 678 RLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISLVEKWNHAEGTPQVAYTFDAGPNAVLI 857 +LT DSNQFHA CLDT PPI Y+N S RII LV ++N G +VAYTFDAGPNAV+ Sbjct: 254 QLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTKVAYTFDAGPNAVIF 313 Query: 858 ARNRKTASLVLQRLLYCFPPQEN 926 + A V + + FPP N Sbjct: 314 TLDDTVAEFV-AAVWHGFPPGSN 335
>Q62967:ERG19_RAT Diphosphomevalonate decarboxylase - Rattus norvegicus (Rat)| Length = 401 Score = 117 bits (293), Expect(2) = 3e-47 Identities = 66/125 (52%), Positives = 79/125 (63%) Frame = +3 Query: 30 MATEAEAQWVLTATGRSPTNIAVIKYWGKRDEALILPVNDSISVTLDPDHLSATTTVAAS 209 MA+E ++T T +P NIAVIKYWGKRDEALILP+N S+SVTL D L TTT A S Sbjct: 1 MASEKPQDLMVTCT--APVNIAVIKYWGKRDEALILPINPSLSVTLHQDQLKTTTTAAIS 58 Query: 210 PAFPSDRMWLNGKEIALSGGRFQSCLREIRKRARDVEDEKKGIKVKKEDWEKLHVHIASY 389 F DR+WLNG+E + R Q+CLREIR+ AR G + K VH+AS Sbjct: 59 KDFTEDRIWLNGREEDVGQPRLQACLREIRRLARKRRSTGDGDALPLSLGYK--VHVASV 116 Query: 390 NNFPT 404 NNFPT Sbjct: 117 NNFPT 121 Score = 93.2 bits (230), Expect(2) = 3e-47 Identities = 45/89 (50%), Positives = 65/89 (73%) Frame = +2 Query: 413 FGLFGCWLCLSWQGSGSACRSIYGGFVKWCMGKNDDGSDSMAVQLVDESHWDDLVIIIAV 592 +G+ G ++ +GSGSACRS+YGGFV+W MG+ DG DS+A Q+ E HW L ++I V Sbjct: 143 YGVEGDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQIAPEWHWPQLRVLILV 202 Query: 593 VSSKQKETSSTSGMRDTVETSPLLQYRAQ 679 VS+++K T ST GM+ +V TS LL++RA+ Sbjct: 203 VSAEKKPTGSTVGMQTSVATSTLLKFRAE 231 Score = 94.7 bits (234), Expect = 8e-19 Identities = 74/227 (32%), Positives = 96/227 (42%), Gaps = 5/227 (2%) Frame = +3 Query: 555 SRIGMILXXXXXXXXXXRRKPVAPVGCETLSK--QAPSCSTGPRLTCADSNQFHAVCLDT 728 S +GM R + + P + +++ Q +LT DSNQFHA CLDT Sbjct: 212 STVGMQTSVATSTLLKFRAESIVPERMKEMTRCIQEQDFQAFAQLTMKDSNQFHATCLDT 271 Query: 729 SPPIFYMNDTSHRIISLVEKWNHAEGTPQVAYTFDAGPNAVLIARNRKTASLVLQRLLYC 908 PPI Y+NDTS RII LV ++N G +VAYTFDAGPNAV+ A V + + Sbjct: 272 FPPISYLNDTSRRIIQLVHRFNAHHGQTKVAYTFDAGPNAVIFTLEDTVAEFV-AAVRHS 330 Query: 909 FPPQENDLDRCV*YYQE*THHLFVPGYSTNMYTYDKHDHDSYMVG---DKSILSDAGVQS 1079 FPP N D ++ G +LSD S Sbjct: 331 FPPAANG--------------------------------DKFLKGLQVAPVLLSDELKTS 358 Query: 1080 LADIEALPPPPEMKSPSQKFKGDVSYFICSRPGAGPKVLTDESHTLI 1220 L A P P G V Y I ++ G GP+VL D H L+ Sbjct: 359 L----ATEPSP----------GGVQYIIATQVGPGPQVLDDPHHHLL 391
>P32377:ERG19_YEAST Diphosphomevalonate decarboxylase - Saccharomyces cerevisiae| (Baker's yeast) Length = 396 Score = 102 bits (253), Expect(2) = 2e-40 Identities = 51/116 (43%), Positives = 72/116 (62%) Frame = +3 Query: 57 VLTATGRSPTNIAVIKYWGKRDEALILPVNDSISVTLDPDHLSATTTVAASPAFPSDRMW 236 V TA+ +P NIA +KYWGKRD L LP N SISVTL D L T+ A +P F D +W Sbjct: 3 VYTASVTAPVNIATLKYWGKRDTKLNLPTNSSISVTLSQDDLRTLTSAATAPEFERDTLW 62 Query: 237 LNGKEIALSGGRFQSCLREIRKRARDVEDEKKGIKVKKEDWEKLHVHIASYNNFPT 404 LNG+ ++ R Q+CLR++R+ +++E + + + W+ +HI S NNFPT Sbjct: 63 LNGEPHSIDNERTQNCLRDLRQLRKEMESKDASLPTLSQ-WK---LHIVSENNFPT 114 Score = 86.3 bits (212), Expect(2) = 2e-40 Identities = 41/77 (53%), Positives = 54/77 (70%) Frame = +2 Query: 449 QGSGSACRSIYGGFVKWCMGKNDDGSDSMAVQLVDESHWDDLVIIIAVVSSKQKETSSTS 628 +GSGSACRS++GG+V W MGK +DG DSMAVQ+ D S W + + VVS +K+ SST Sbjct: 151 KGSGSACRSLFGGYVAWEMGKAEDGHDSMAVQIADSSDWPQMKACVLVVSDIKKDVSSTQ 210 Query: 629 GMRDTVETSPLLQYRAQ 679 GM+ TV TS L + R + Sbjct: 211 GMQLTVATSELFKERIE 227 Score = 80.5 bits (197), Expect = 2e-14 Identities = 53/126 (42%), Positives = 63/126 (50%), Gaps = 4/126 (3%) Frame = +3 Query: 549 LTSRIGMILXXXXXXXXXXRRKPVAPVGCETLSKQA--PSCSTGPRLTCADSNQFHAVCL 722 ++S GM L R + V P E + K +T + T DSN FHA CL Sbjct: 206 VSSTQGMQLTVATSELFKERIEHVVPKRFEVMRKAIVEKDFATFAKETMMDSNSFHATCL 265 Query: 723 DTSPPIFYMNDTSHRIISLVEKWNHAEGTPQVAYTFDAGPNAVL--IARNRKTASLVLQR 896 D+ PPIFYMNDTS RIIS N G VAYTFDAGPNAVL +A N + + Sbjct: 266 DSFPPIFYMNDTSKRIISWCHTINQFYGETIVAYTFDAGPNAVLYYLAENESKLFAFIYK 325 Query: 897 LLYCFP 914 L P Sbjct: 326 LFGSVP 331
>Q7S873:DBP7_NEUCR ATP-dependent RNA helicase dbp-7 - Neurospora crassa| Length = 814 Score = 33.1 bits (74), Expect = 2.9 Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 7/98 (7%) Frame = +3 Query: 642 LSKQAPSC---STGPRLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISLVEKWNHAEGTP 812 L +AP+ +T P+L DS+ F + + Y+ HRI++L ++ +GTP Sbjct: 164 LEMKAPTAIQKNTIPQLVKEDSDAFLQAETGSGKTLAYLLPIVHRILALS---HNEDGTP 220 Query: 813 QVAYTF-DAGPNAVLIARNR---KTASLVLQRLLYCFP 914 + ++G A+++A R K ++VL+++L C P Sbjct: 221 KTTKVHRNSGLFAIILAPTRELCKQIAVVLEKVLRCAP 258
>Q2GZU7:DBP7_CHAGB ATP-dependent RNA helicase DBP7 - Chaetomium globosum (Soil fungus)| Length = 806 Score = 32.3 bits (72), Expect = 5.0 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 7/98 (7%) Frame = +3 Query: 642 LSKQAPSC---STGPRLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISLVEKWNHAEGTP 812 L +AP+ +T P+L DS+ F + + Y+ HRI+SL + +GTP Sbjct: 160 LEMKAPTAIQKNTVPQLINGDSDAFLQAETGSGKTLAYLLPIVHRIMSLS---LNEDGTP 216 Query: 813 QVAYTF-DAGPNAVLIARNR---KTASLVLQRLLYCFP 914 + ++G A+++A R K S+VL+++L C P Sbjct: 217 KDTKVHRNSGLFAIIMAPTRELCKQISVVLEKVLRCAP 254
>Q9FH95:AP2L8_ARATH AP2-like ethylene-responsive transcription factor At5g67180 -| Arabidopsis thaliana (Mouse-ear cress) Length = 352 Score = 32.3 bits (72), Expect = 5.0 Identities = 19/48 (39%), Positives = 24/48 (50%) Frame = -3 Query: 834 HQMCRQPVGFLPRGSTSPQG*LSCVTYHSCRRWEDSCPNIQHETGCYL 691 H + RQ GF PRGS+ +G VT H C RWE ++ YL Sbjct: 173 HVLRRQSTGF-PRGSSKYRG----VTLHKCGRWESRLGQFLNKKYVYL 215
>Q64751:DPOL_ADEG1 DNA polymerase - Avian adenovirus gal1 (strain Phelps) (FAdV-1) (Fowl| adenovirus 1) Length = 1121 Score = 31.6 bits (70), Expect = 8.5 Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Frame = +3 Query: 1077 SLADIEALPPPPEMKSPSQKFKGDVSYFICSRPGA----GPKVLTDESHTLIDSAT 1232 S+ IEA PPPPEM P ICSR G + L DE T+ID T Sbjct: 560 SILKIEAYPPPPEMLDPLPP--------ICSRRGGRLVWTNEALYDEVVTVIDILT 607
>P47927:AP2_ARATH Floral homeotic protein APETALA2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 432 Score = 31.6 bits (70), Expect = 8.5 Identities = 17/34 (50%), Positives = 20/34 (58%) Frame = -3 Query: 834 HQMCRQPVGFLPRGSTSPQG*LSCVTYHSCRRWE 733 H + RQ GF PRGS+ +G VT H C RWE Sbjct: 208 HVLRRQSTGF-PRGSSKYRG----VTLHKCGRWE 236 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 252,037,703 Number of extensions: 5817247 Number of successful extensions: 14913 Number of sequences better than 10.0: 9 Number of HSP's gapped: 14904 Number of HSP's successfully gapped: 17 Length of query: 472 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 355 Effective length of database: 68,593,924 Effective search space: 24350843020 Effective search space used: 24350843020 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
