Clone Name | FLbaf96f06 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK243049.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100010I02, full insert sequence Length = 1569 Score = 472 bits (238), Expect = e-129 Identities = 370/414 (89%) Strand = Plus / Plus Query: 30 atggcgacggaggcggaggcgcagtgggtgctgacggccacggggcggtcgccaactaac 89 |||||| ||| || ||||| |||||||||||| | |||||| || || || || || ||| Sbjct: 136 atggcggcggcggaggaggggcagtgggtgctcatggccaccggccgatctcccaccaac 195 Query: 90 atcgccgtgatcaagtactgggggaagcgggacgaggcgctcatcctccctgtcaacgac 149 |||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 196 atcgccgtcatcaagtactgggggaagagggacgaggcgctcatcctccccgtcaacgac 255 Query: 150 agcatcagcgtcaccctcgaccccgaccacctctccgccaccaccaccgtcgccgccagc 209 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 256 agcatcagcgtcaccctcgaccccgaccacctctccgccaccaccaccgtcgccgtcagc 315 Query: 210 cccgccttcccctccgaccgcatgtggctcaacggaaaggagattgcgttgtcgggcggg 269 || ||||||||||||||||||||||||||||||| |||||||| | ||||| || ||| Sbjct: 316 ccttccttcccctccgaccgcatgtggctcaacggcaaggagatctccttgtcaggaggg 375 Query: 270 aggtttcagagttgcctgagggagatccggaagcgggctcgtgatgtagaggacgagaaa 329 ||||||||||| ||||||||||||||||||||||| |||| ||||| ||||| ||||| Sbjct: 376 aggtttcagagctgcctgagggagatccggaagcgtgctcaagatgtcgaggatgagaag 435 Query: 330 aaggggatcaaggtcaagaaagaggactgggagaagttgcatgtccacattgcgtcgtac 389 |||||||||| | |||||||||||||||||| |||| | ||||| ||||| || |||| | Sbjct: 436 aaggggatcaggatcaagaaagaggactgggggaagctacatgtacacatagcatcgttc 495 Query: 390 aacaacttcccaaccgctgccggtttggcctcttcggctgctggctttgcttgt 443 ||||||||||| || ||||| |||||||||||||||||||||||||| |||||| Sbjct: 496 aacaacttccccactgctgctggtttggcctcttcggctgctggcttggcttgt 549 Score = 274 bits (138), Expect = 8e-70 Identities = 183/198 (92%) Strand = Plus / Plus Query: 676 ccaggttaacttgtgcagatagcaaccagtttcatgctgtatgtttggacacgagtcctc 735 |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 917 ccaggttaacttgtgcagatagcaaccaatttcatgctgtatgtttggacacgagccctc 976 Query: 736 ccatcttctacatgaatgatacgtcacacaggataattagccttgtggagaagtggaacc 795 |||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 977 ccatcttctatatgaacgatacatcacacaggataattagccttgtggagaagtggaacc 1036 Query: 796 acgcggaaggaaccccacaggttgcctacacatttgatgctgggcctaacgctgtcctaa 855 | | |||||||||||||||||||| ||||| || ||||||||||| || |||||||||| Sbjct: 1037 agtcagaaggaaccccacaggttgcttacaccttcgatgctgggcccaatgctgtcctaa 1096 Query: 856 tagcacgaaaccgcaaaa 873 | |||| ||||||||||| Sbjct: 1097 tcgcaccaaaccgcaaaa 1114 Score = 224 bits (113), Expect = 7e-55 Identities = 197/225 (87%) Strand = Plus / Plus Query: 455 tctggaagtgcatgccgcagtatatatggtggatttgtgaaatggtgtatgggaaaaaat 514 ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 625 tctggaagtgcatgccgcagtatatatgggggattcgtgaaatggtgtatgggaaaaaat 684 Query: 515 gacgatggaagtgacagtatggcagtgcagcttgttgacgagtcgcattgggatgatctt 574 | |||||||| ||||| || || || || |||| ||| ||| | || ||| |||||||| Sbjct: 685 aatgatggaagcgacagcatagctgtacaacttgctgatgaggcacactggaatgatctt 744 Query: 575 gtcataatcatagcagtggtcagctcaaagcagaaggaaaccagtagcaccagtgggatg 634 || || |||||||| |||||||| ||||||||||||||||| |||||||| ||||||||| Sbjct: 745 gttattatcatagcggtggtcagttcaaagcagaaggaaacaagtagcactagtgggatg 804 Query: 635 cgagacactgtcgaaacaagccccctcttgcagtacagggcccag 679 ||||||| ||| |||||||| ||||| ||||| || ||||||||| Sbjct: 805 cgagacagtgttgaaacaagtccccttttgcaatatagggcccag 849 Score = 89.7 bits (45), Expect = 3e-14 Identities = 96/113 (84%) Strand = Plus / Plus Query: 1125 ccgagccaaaaattcaagggtgacgttagctacttcatttgcagcaggcctggggctggc 1184 |||||||||||||||||||| || || ||||||||||| || ||||||| ||| |||||| Sbjct: 1273 ccgagccaaaaattcaagggagatgtgagctacttcatctgtagcaggcttggagctggc 1332 Query: 1185 ccaaaagttcttaccgacgagagccacacattgattgattcagccacggggct 1237 ||||||||| | || ||||| |||| ||||||| ||||| | ||||||||| Sbjct: 1333 ccaaaagttgtcactgacgaaagcctagcattgatcgattcggtcacggggct 1385
>ref|NM_001052177.1| Oryza sativa (japonica cultivar-group) Os02g0109100 (Os02g0109100) mRNA, complete cds Length = 2376 Score = 472 bits (238), Expect = e-129 Identities = 370/414 (89%) Strand = Plus / Plus Query: 30 atggcgacggaggcggaggcgcagtgggtgctgacggccacggggcggtcgccaactaac 89 |||||| ||| || ||||| |||||||||||| | |||||| || || || || || ||| Sbjct: 283 atggcggcggcggaggaggggcagtgggtgctcatggccaccggccgatctcccaccaac 342 Query: 90 atcgccgtgatcaagtactgggggaagcgggacgaggcgctcatcctccctgtcaacgac 149 |||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 343 atcgccgtcatcaagtactgggggaagagggacgaggcgctcatcctccccgtcaacgac 402 Query: 150 agcatcagcgtcaccctcgaccccgaccacctctccgccaccaccaccgtcgccgccagc 209 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 403 agcatcagcgtcaccctcgaccccgaccacctctccgccaccaccaccgtcgccgtcagc 462 Query: 210 cccgccttcccctccgaccgcatgtggctcaacggaaaggagattgcgttgtcgggcggg 269 || ||||||||||||||||||||||||||||||| |||||||| | ||||| || ||| Sbjct: 463 ccttccttcccctccgaccgcatgtggctcaacggcaaggagatctccttgtcaggaggg 522 Query: 270 aggtttcagagttgcctgagggagatccggaagcgggctcgtgatgtagaggacgagaaa 329 ||||||||||| ||||||||||||||||||||||| |||| ||||| ||||| ||||| Sbjct: 523 aggtttcagagctgcctgagggagatccggaagcgtgctcaagatgtcgaggatgagaag 582 Query: 330 aaggggatcaaggtcaagaaagaggactgggagaagttgcatgtccacattgcgtcgtac 389 |||||||||| | |||||||||||||||||| |||| | ||||| ||||| || |||| | Sbjct: 583 aaggggatcaggatcaagaaagaggactgggggaagctacatgtacacatagcatcgttc 642 Query: 390 aacaacttcccaaccgctgccggtttggcctcttcggctgctggctttgcttgt 443 ||||||||||| || ||||| |||||||||||||||||||||||||| |||||| Sbjct: 643 aacaacttccccactgctgctggtttggcctcttcggctgctggcttggcttgt 696 Score = 274 bits (138), Expect = 8e-70 Identities = 183/198 (92%) Strand = Plus / Plus Query: 676 ccaggttaacttgtgcagatagcaaccagtttcatgctgtatgtttggacacgagtcctc 735 |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 1064 ccaggttaacttgtgcagatagcaaccaatttcatgctgtatgtttggacacgagccctc 1123 Query: 736 ccatcttctacatgaatgatacgtcacacaggataattagccttgtggagaagtggaacc 795 |||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1124 ccatcttctatatgaacgatacatcacacaggataattagccttgtggagaagtggaacc 1183 Query: 796 acgcggaaggaaccccacaggttgcctacacatttgatgctgggcctaacgctgtcctaa 855 | | |||||||||||||||||||| ||||| || ||||||||||| || |||||||||| Sbjct: 1184 agtcagaaggaaccccacaggttgcttacaccttcgatgctgggcccaatgctgtcctaa 1243 Query: 856 tagcacgaaaccgcaaaa 873 | |||| ||||||||||| Sbjct: 1244 tcgcaccaaaccgcaaaa 1261 Score = 224 bits (113), Expect = 7e-55 Identities = 197/225 (87%) Strand = Plus / Plus Query: 455 tctggaagtgcatgccgcagtatatatggtggatttgtgaaatggtgtatgggaaaaaat 514 ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 772 tctggaagtgcatgccgcagtatatatgggggattcgtgaaatggtgtatgggaaaaaat 831 Query: 515 gacgatggaagtgacagtatggcagtgcagcttgttgacgagtcgcattgggatgatctt 574 | |||||||| ||||| || || || || |||| ||| ||| | || ||| |||||||| Sbjct: 832 aatgatggaagcgacagcatagctgtacaacttgctgatgaggcacactggaatgatctt 891 Query: 575 gtcataatcatagcagtggtcagctcaaagcagaaggaaaccagtagcaccagtgggatg 634 || || |||||||| |||||||| ||||||||||||||||| |||||||| ||||||||| Sbjct: 892 gttattatcatagcggtggtcagttcaaagcagaaggaaacaagtagcactagtgggatg 951 Query: 635 cgagacactgtcgaaacaagccccctcttgcagtacagggcccag 679 ||||||| ||| |||||||| ||||| ||||| || ||||||||| Sbjct: 952 cgagacagtgttgaaacaagtccccttttgcaatatagggcccag 996
>dbj|AK241754.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065204B19, full insert sequence Length = 934 Score = 446 bits (225), Expect = e-121 Identities = 363/409 (88%) Strand = Plus / Plus Query: 28 caatggcgacggaggcggaggcgcagtgggtgctgacggccacggggcggtcgccaacta 87 |||||||| ||| || ||||| |||||||||||| | |||||| || || || || || | Sbjct: 105 caatggcggcggcggaggaggggcagtgggtgctcatggccaccggccgatctcccacca 164 Query: 88 acatcgccgtgatcaagtactgggggaagcgggacgaggcgctcatcctccctgtcaacg 147 |||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 165 acatcgccgtcatcaagtactgggggaagagggacgaggcgctcatcctccccgtcaacg 224 Query: 148 acagcatcagcgtcaccctcgaccccgaccacctctccgccaccaccaccgtcgccgcca 207 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 225 acagcatcagcgtcaccctcgaccccgaccacctctccgccaccaccaccgtcgccgtca 284 Query: 208 gccccgccttcccctccgaccgcatgtggctcaacggaaaggagattgcgttgtcgggcg 267 |||| |||||||||||||||| |||||||||||||| |||||||| | ||||| || | Sbjct: 285 gcccttccttcccctccgaccggatgtggctcaacggcaaggagatctccttgtcaggag 344 Query: 268 ggaggtttcagagttgcctgagggagatccggaagcgggctcgtgatgtagaggacgaga 327 ||||||| ||||| ||||| ||||||||||||||||| |||| ||||| ||||| |||| Sbjct: 345 ggaggttccagagctgcctcagggagatccggaagcgtgctcaagatgtcgaggatgaga 404 Query: 328 aaaaggggatcaaggtcaagaaagaggactgggagaagttgcatgtccacattgcgtcgt 387 | |||||||||| | |||||||||||||||||| |||| | ||||| ||||| || |||| Sbjct: 405 agaaggggatcaggatcaagaaagaggactgggggaagctacatgtacacatagcatcgt 464 Query: 388 acaacaacttcccaaccgctgccggtttggcctcttcggctgctggctt 436 ||||||||||||| || ||||| |||||||||||||||| ||||||||| Sbjct: 465 acaacaacttccccactgctgctggtttggcctcttcggttgctggctt 513 Score = 97.6 bits (49), Expect = 1e-16 Identities = 55/57 (96%) Strand = Plus / Plus Query: 455 tctggaagtgcatgccgcagtatatatggtggatttgtgaaatggtgtatgggaaaa 511 ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 596 tctggaagtgcatgccgcagtatatatgggggattcgtgaaatggtgtatgggaaaa 652 Score = 50.1 bits (25), Expect = 0.022 Identities = 64/77 (83%) Strand = Plus / Plus Query: 518 gatggaagtgacagtatggcagtgcagcttgttgacgagtcgcattgggatgatcttgtc 577 |||||||||||||| || || || || |||| ||| ||| | || ||| |||||||||| Sbjct: 756 gatggaagtgacagcatagctgtacaacttgctgatgaggcacactggaatgatcttgtt 815 Query: 578 ataatcatagcagtggt 594 || |||||||||||||| Sbjct: 816 attatcatagcagtggt 832
>ref|NM_001052168.1| Oryza sativa (japonica cultivar-group) Os02g0107200 (Os02g0107200) mRNA, complete cds Length = 1662 Score = 446 bits (225), Expect = e-121 Identities = 363/409 (88%) Strand = Plus / Plus Query: 28 caatggcgacggaggcggaggcgcagtgggtgctgacggccacggggcggtcgccaacta 87 |||||||| ||| || ||||| |||||||||||| | |||||| || || || || || | Sbjct: 941 caatggcggcggcggaggaggggcagtgggtgctcatggccaccggccgatctcccacca 1000 Query: 88 acatcgccgtgatcaagtactgggggaagcgggacgaggcgctcatcctccctgtcaacg 147 |||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 1001 acatcgccgtcatcaagtactgggggaagagggacgaggcgctcatcctccccgtcaacg 1060 Query: 148 acagcatcagcgtcaccctcgaccccgaccacctctccgccaccaccaccgtcgccgcca 207 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1061 acagcatcagcgtcaccctcgaccccgaccacctctccgccaccaccaccgtcgccgtca 1120 Query: 208 gccccgccttcccctccgaccgcatgtggctcaacggaaaggagattgcgttgtcgggcg 267 |||| |||||||||||||||| |||||||||||||| |||||||| | ||||| || | Sbjct: 1121 gcccttccttcccctccgaccggatgtggctcaacggcaaggagatctccttgtcaggag 1180 Query: 268 ggaggtttcagagttgcctgagggagatccggaagcgggctcgtgatgtagaggacgaga 327 ||||||| ||||| ||||| ||||||||||||||||| |||| ||||| ||||| |||| Sbjct: 1181 ggaggttccagagctgcctcagggagatccggaagcgtgctcaagatgtcgaggatgaga 1240 Query: 328 aaaaggggatcaaggtcaagaaagaggactgggagaagttgcatgtccacattgcgtcgt 387 | |||||||||| | |||||||||||||||||| |||| | ||||| ||||| || |||| Sbjct: 1241 agaaggggatcaggatcaagaaagaggactgggggaagctacatgtacacatagcatcgt 1300 Query: 388 acaacaacttcccaaccgctgccggtttggcctcttcggctgctggctt 436 ||||||||||||| || ||||| |||||||||||||||| ||||||||| Sbjct: 1301 acaacaacttccccactgctgctggtttggcctcttcggttgctggctt 1349 Score = 240 bits (121), Expect = 1e-59 Identities = 199/225 (88%) Strand = Plus / Plus Query: 455 tctggaagtgcatgccgcagtatatatggtggatttgtgaaatggtgtatgggaaaaaat 514 ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 1432 tctggaagtgcatgccgcagtatatatgggggattcgtgaaatggtgtatgggaaaaaat 1491 Query: 515 gacgatggaagtgacagtatggcagtgcagcttgttgacgagtcgcattgggatgatctt 574 | |||||||||||||| || || || || |||| ||| ||| | || ||| |||||||| Sbjct: 1492 aatgatggaagtgacagcatagctgtacaacttgctgatgaggcacactggaatgatctt 1551 Query: 575 gtcataatcatagcagtggtcagctcaaagcagaaggaaaccagtagcaccagtgggatg 634 || || ||||||||||||||||| ||||||||||||||||| |||||||| ||||||||| Sbjct: 1552 gttattatcatagcagtggtcagttcaaagcagaaggaaacaagtagcactagtgggatg 1611 Query: 635 cgagacactgtcgaaacaagccccctcttgcagtacagggcccag 679 ||||||| ||| |||||||| ||||| ||||| || ||||||||| Sbjct: 1612 cgagacagtgttgaaacaagtccccttttgcaatatagggcccag 1656
>emb|CT837732.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA245E17, full insert sequence Length = 1274 Score = 438 bits (221), Expect = e-119 Identities = 362/409 (88%) Strand = Plus / Plus Query: 28 caatggcgacggaggcggaggcgcagtgggtgctgacggccacggggcggtcgccaacta 87 |||||||| ||| || ||||| |||||||||||| | ||||| || || || || || | Sbjct: 131 caatggcggcggcggaggaggggcagtgggtgctcattgccaccggccgatctcccacca 190 Query: 88 acatcgccgtgatcaagtactgggggaagcgggacgaggcgctcatcctccctgtcaacg 147 |||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 191 acatcgccgtcatcaagtactgggggaagagggacgaggcgctcatcctccccgtcaacg 250 Query: 148 acagcatcagcgtcaccctcgaccccgaccacctctccgccaccaccaccgtcgccgcca 207 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 251 acagcatcagcgtcaccctcgaccccgaccacctctccgccaccaccaccgtcgccgtca 310 Query: 208 gccccgccttcccctccgaccgcatgtggctcaacggaaaggagattgcgttgtcgggcg 267 |||| |||||||||||||||| |||||||||||||| |||||||| | ||||| || | Sbjct: 311 gcccttccttcccctccgaccggatgtggctcaacggcaaggagatctccttgtcaggag 370 Query: 268 ggaggtttcagagttgcctgagggagatccggaagcgggctcgtgatgtagaggacgaga 327 ||||||| ||||| ||||| ||||||||||||||||| |||| ||||| ||||| |||| Sbjct: 371 ggaggttccagagctgcctcagggagatccggaagcgtgctcaagatgtcgaggatgaga 430 Query: 328 aaaaggggatcaaggtcaagaaagaggactgggagaagttgcatgtccacattgcgtcgt 387 | |||||||||| | |||||||||||||||||| |||| | ||||| ||||| || |||| Sbjct: 431 agaaggggatcaggatcaagaaagaggactgggggaagctacatgtacacatagcatcgt 490 Query: 388 acaacaacttcccaaccgctgccggtttggcctcttcggctgctggctt 436 ||||||||||||| || ||||| |||||||||||||||| ||||||||| Sbjct: 491 acaacaacttccccactgctgctggtttggcctcttcggttgctggctt 539 Score = 240 bits (121), Expect = 1e-59 Identities = 199/225 (88%) Strand = Plus / Plus Query: 455 tctggaagtgcatgccgcagtatatatggtggatttgtgaaatggtgtatgggaaaaaat 514 ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct: 622 tctggaagtgcatgccgcagtatatatgggggattcgtgaaatggtgtatgggaaaaaat 681 Query: 515 gacgatggaagtgacagtatggcagtgcagcttgttgacgagtcgcattgggatgatctt 574 | |||||||||||||| || || || || |||| ||| ||| | || ||| |||||||| Sbjct: 682 aatgatggaagtgacagcatagctgtacaacttgctgatgaggcacactggaatgatctt 741 Query: 575 gtcataatcatagcagtggtcagctcaaagcagaaggaaaccagtagcaccagtgggatg 634 || || ||||||||||||||||| ||||||||||||||||| |||||||| ||||||||| Sbjct: 742 gttattatcatagcagtggtcagttcaaagcagaaggaaacaagtagcactagtgggatg 801 Query: 635 cgagacactgtcgaaacaagccccctcttgcagtacagggcccag 679 ||||||| ||| |||||||| ||||| ||||| || ||||||||| Sbjct: 802 cgagacagtgttgaaacaagtccccttttgcaatatagggcccag 846
>gb|AY104116.1| Zea mays PCO087623 mRNA sequence Length = 1709 Score = 347 bits (175), Expect = 7e-92 Identities = 343/399 (85%) Strand = Plus / Plus Query: 41 ggcggaggcgcagtgggtgctgacggccacggggcggtcgccaactaacatcgccgtgat 100 |||||||| |||||||||||| | ||| ||||||||| |||| || ||||| || ||||| Sbjct: 252 ggcggaggggcagtgggtgctcatggcaacggggcggacgccgaccaacattgcggtgat 311 Query: 101 caagtactgggggaagcgggacgaggcgctcatcctccctgtcaacgacagcatcagcgt 160 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 312 caagtactgggggaagcgggacgaggcgctcatcctccccatcaacgacagcatcagcgt 371 Query: 161 caccctcgaccccgaccacctctccgccaccaccaccgtcgccgccagccccgccttccc 220 || |||||||||||||| ||||||||||||||||| ||||||| ||||||| | ||||| Sbjct: 372 aacgctcgaccccgaccatctctccgccaccaccactgtcgccgtcagcccctcattccc 431 Query: 221 ctccgaccgcatgtggctcaacggaaaggagattgcgttgtcgggcgggaggtttcagag 280 |||||||||||||||||||| || |||||||| || | | || || ||||||||||| Sbjct: 432 ttccgaccgcatgtggctcaatggcaaggagatctcgctattaggaggaaggtttcagag 491 Query: 281 ttgcctgagggagatccggaagcgggctcgtgatgtagaggacgagaaaaaggggatcaa 340 ||||| || || ||| | ||||| |||||||| | |||||| || | || || |||| Sbjct: 492 ctgcctcagagaaatcagaaagcgtgctcgtgactttgaggacaaggagaaaggcgtcaa 551 Query: 341 ggtcaagaaagaggactgggagaagttgcatgtccacattgcgtcgtacaacaacttccc 400 | ||||||||||||||||||| ||||||||||| ||||| || ||||||||||||||||| Sbjct: 552 gatcaagaaagaggactgggacaagttgcatgttcacatagcctcgtacaacaacttccc 611 Query: 401 aaccgctgccggtttggcctcttcggctgctggctttgc 439 || ||||| |||||| ||||||| ||||||||| |||| Sbjct: 612 cactgctgctggtttgccctcttcagctgctggcattgc 650 Score = 280 bits (141), Expect = 1e-71 Identities = 210/233 (90%) Strand = Plus / Plus Query: 447 ggcagggatctggaagtgcatgccgcagtatatatggtggatttgtgaaatggtgtatgg 506 ||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 722 ggcagggatctgggagtgcatgccgcagtatatatggtggttttgtgaaatggtgcatgg 781 Query: 507 gaaaaaatgacgatggaagtgacagtatggcagtgcagcttgttgacgagtcgcattggg 566 || |||| || ||||||||||||||||| || |||||||||| |||||| | || ||| Sbjct: 782 gagaaaaagatgatggaagtgacagtattgccgtgcagcttgctgacgaaacacactgga 841 Query: 567 atgatcttgtcataatcatagcagtggtcagctcaaagcagaaggaaaccagtagcacca 626 |||||||||| || || || |||||||||||||||||||||||||||||||||||||||| Sbjct: 842 atgatcttgtaattattattgcagtggtcagctcaaagcagaaggaaaccagtagcacca 901 Query: 627 gtgggatgcgagacactgtcgaaacaagccccctcttgcagtacagggcccag 679 ||||||||||||| | ||| |||||||| || ||||||||||||||||||||| Sbjct: 902 gtgggatgcgagatagtgttgaaacaagtcctctcttgcagtacagggcccag 954 Score = 214 bits (108), Expect = 7e-52 Identities = 216/252 (85%) Strand = Plus / Plus Query: 681 ttaacttgtgcagatagcaaccagtttcatgctgtatgtttggacacgagtcctcccatc 740 ||||||||||| |||||||||||||||||||||||||| || |||||||| ||||| ||| Sbjct: 1027 ttaacttgtgcggatagcaaccagtttcatgctgtatgcttagacacgagccctcctatc 1086 Query: 741 ttctacatgaatgatacgtcacacaggataattagccttgtggagaagtggaaccacgcg 800 ||||| |||||||| ||||||||| | ||||||||||||||||| || ||||||||| | Sbjct: 1087 ttctatatgaatgacacgtcacaccgaataattagccttgtggaaaaatggaaccactca 1146 Query: 801 gaaggaaccccacaggttgcctacacatttgatgctgggcctaacgctgtcctaatagca 860 ||||||||||||||||| || ||||| || ||||||||||| |||||||| ||||| ||| Sbjct: 1147 gaaggaaccccacaggtcgcttacaccttcgatgctgggccaaacgctgttctaatcgca 1206 Query: 861 cgaaaccgcaaaacagcttcgcttgtccttcagaggctcttatactgctttcctccacaa 920 | |||||| ||||| || | | | |||| |||| |||| |||||| || |||||||| Sbjct: 1207 caaaaccgtaaaactgcagcacatctcctccagaagctcctatactatttccctccacag 1266 Query: 921 gaaaatgatttg 932 || ||||||||| Sbjct: 1267 gataatgatttg 1278 Score = 67.9 bits (34), Expect = 9e-08 Identities = 130/162 (80%) Strand = Plus / Plus Query: 1028 cagctatatggtcggcgataaatcaatcctaagtgacgccggagtgcaatccttagctga 1087 ||||||| |||| ||||||||||| || ||| ||| ||||||| |||| ||| | || Sbjct: 1281 cagctatctggttggcgataaatcgattctaggtgtcgccggattgcattccatgaaaga 1340 Query: 1088 catcgaggcccttccaccgcccccggagatgaagtcaccgagccaaaaattcaagggtga 1147 | ||||||| |||||| | || || |||| |||| |||| || ||||||||||| || Sbjct: 1341 cgtcgaggctcttccagcacctccagagacgaagataccggatcagaaattcaagggcga 1400 Query: 1148 cgttagctacttcatttgcagcaggcctggggctggcccaaa 1189 |||||||||||||| |||||||||| ||| ||||| ||||| Sbjct: 1401 tgttagctacttcatctgcagcaggcttggcgctggtccaaa 1442
>gb|DQ244521.1| Zea mays clone 8790 mRNA sequence Length = 995 Score = 297 bits (150), Expect = 6e-77 Identities = 335/394 (85%), Gaps = 2/394 (0%) Strand = Plus / Plus Query: 41 ggcggaggcgcagtgggtgctgacggccacggggcggtcgccaactaacatcgccgtgat 100 |||||||| |||||||||||| | ||| ||||||||| |||| || ||||| || ||||| Sbjct: 150 ggcggaggggcagtgggtgctcatggcaacggggcggacgccgaccaacattgcggtgat 209 Query: 101 caagtactgggggaagcgggacgaggcgctcatcctccctgtcaacgacagcatcagcgt 160 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 210 caagtactgggggaagcgggacgaggcgctcatcctccccatcaacgacagcatcagcgt 269 Query: 161 caccctcgaccccgaccacctctccgccaccaccaccgtcgccgccagccccgccttccc 220 || |||||||||||||| ||||||||||||||||| |||||| ||||||| | ||||| Sbjct: 270 aacgctcgaccccgaccatctctccgccaccaccactatcgccgtcagcccctcattccc 329 Query: 221 ctccgaccgcatgtggctcaacggaaaggagattgcgttgtcgggcgggaggtttcagag 280 |||||||||||||||||||| || |||||||| || | | || || ||||||||||| Sbjct: 330 ttccgaccgcatgtggctcaatggcaaggagatctcgctattaggaggaaggtttcagag 389 Query: 281 ttgcctgagggagatccggaagcgggctcgtgatgtagaggacgagaaaaaggggatcaa 340 ||||| | || ||| | ||||| |||||||| | |||||| || | |||| |||| Sbjct: 390 ctgcctcaaagaaatcagaaagcgtgctcgtgacattgaggacaaggagaaggacgtcaa 449 Query: 341 ggtcaagaaagaggactgggagaagttgcatgtccacattgcgtcgtacaacaacttccc 400 | |||||||||||||||||| ||||||||||| ||||| || | ||||||||||||||| Sbjct: 450 gatcaagaaagaggactggggcaagttgcatgttcacatagcctggtacaacaacttccc 509 Query: 401 aacc-gctgccggtttgg-cctcttcggctgctg 432 ||| |||| ||||||| ||||||||||||||| Sbjct: 510 caccttctgctggtttggccctcttcggctgctg 543
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 285 bits (144), Expect = 2e-73 Identities = 201/220 (91%) Strand = Plus / Minus Query: 30 atggcgacggaggcggaggcgcagtgggtgctgacggccacggggcggtcgccaactaac 89 |||||| ||| || ||||| |||||||||||| | |||||| || || || || || ||| Sbjct: 500134 atggcggcggcggaggaggggcagtgggtgctcatggccaccggccgatctcccaccaac 500075 Query: 90 atcgccgtgatcaagtactgggggaagcgggacgaggcgctcatcctccctgtcaacgac 149 |||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 500074 atcgccgtcatcaagtactgggggaagagggacgaggcgctcatcctccccgtcaacgac 500015 Query: 150 agcatcagcgtcaccctcgaccccgaccacctctccgccaccaccaccgtcgccgccagc 209 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 500014 agcatcagcgtcaccctcgaccccgaccacctctccgccaccaccaccgtcgccgtcagc 499955 Query: 210 cccgccttcccctccgaccgcatgtggctcaacggaaagg 249 || ||||||||||||||||||||||||||||||| |||| Sbjct: 499954 ccttccttcccctccgaccgcatgtggctcaacggcaagg 499915 Score = 281 bits (142), Expect = 3e-72 Identities = 202/222 (90%) Strand = Plus / Plus Query: 28 caatggcgacggaggcggaggcgcagtgggtgctgacggccacggggcggtcgccaacta 87 |||||||| ||| || ||||| |||||||||||| | |||||| || || || || || | Sbjct: 422692 caatggcggcggcggaggaggggcagtgggtgctcatggccaccggccgatctcccacca 422751 Query: 88 acatcgccgtgatcaagtactgggggaagcgggacgaggcgctcatcctccctgtcaacg 147 |||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 422752 acatcgccgtcatcaagtactgggggaagagggacgaggcgctcatcctccccgtcaacg 422811 Query: 148 acagcatcagcgtcaccctcgaccccgaccacctctccgccaccaccaccgtcgccgcca 207 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 422812 acagcatcagcgtcaccctcgaccccgaccacctctccgccaccaccaccgtcgccgtca 422871 Query: 208 gccccgccttcccctccgaccgcatgtggctcaacggaaagg 249 |||| |||||||||||||||| |||||||||||||| |||| Sbjct: 422872 gcccttccttcccctccgaccggatgtggctcaacggcaagg 422913 Score = 196 bits (99), Expect = 2e-46 Identities = 168/191 (87%) Strand = Plus / Minus Query: 258 ttgtcgggcgggaggtttcagagttgcctgagggagatccggaagcgggctcgtgatgta 317 ||||| || |||||||||||||| ||||||||||||||||||||||| |||| ||||| Sbjct: 499435 ttgtcaggagggaggtttcagagctgcctgagggagatccggaagcgtgctcaagatgtc 499376 Query: 318 gaggacgagaaaaaggggatcaaggtcaagaaagaggactgggagaagttgcatgtccac 377 ||||| ||||| |||||||||| | |||||||||||||||||| |||| | ||||| ||| Sbjct: 499375 gaggatgagaagaaggggatcaggatcaagaaagaggactgggggaagctacatgtacac 499316 Query: 378 attgcgtcgtacaacaacttcccaaccgctgccggtttggcctcttcggctgctggcttt 437 || || |||| |||||||||||| || ||||| |||||||||||||||||||||||||| Sbjct: 499315 atagcatcgttcaacaacttccccactgctgctggtttggcctcttcggctgctggcttg 499256 Query: 438 gcttgtcttgg 448 |||||| |||| Sbjct: 499255 gcttgttttgg 499245 Score = 172 bits (87), Expect = 2e-39 Identities = 156/179 (87%) Strand = Plus / Plus Query: 258 ttgtcgggcgggaggtttcagagttgcctgagggagatccggaagcgggctcgtgatgta 317 ||||| || |||||||| ||||| ||||| ||||||||||||||||| |||| ||||| Sbjct: 423366 ttgtcaggagggaggttccagagctgcctcagggagatccggaagcgtgctcaagatgtc 423425 Query: 318 gaggacgagaaaaaggggatcaaggtcaagaaagaggactgggagaagttgcatgtccac 377 ||||| ||||| |||||||||| | |||||||||||||||||| |||| | ||||| ||| Sbjct: 423426 gaggatgagaagaaggggatcaggatcaagaaagaggactgggggaagctacatgtacac 423485 Query: 378 attgcgtcgtacaacaacttcccaaccgctgccggtttggcctcttcggctgctggctt 436 || || ||||||||||||||||| || ||||| |||||||||||||||| ||||||||| Sbjct: 423486 atagcatcgtacaacaacttccccactgctgctggtttggcctcttcggttgctggctt 423544 Score = 143 bits (72), Expect = 2e-30 Identities = 87/92 (94%) Strand = Plus / Minus Query: 676 ccaggttaacttgtgcagatagcaaccagtttcatgctgtatgtttggacacgagtcctc 735 |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 498144 ccaggttaacttgtgcagatagcaaccaatttcatgctgtatgtttggacacgagccctc 498085 Query: 736 ccatcttctacatgaatgatacgtcacacagg 767 |||||||||| ||||| ||||| ||||||||| Sbjct: 498084 ccatcttctatatgaacgatacatcacacagg 498053 Score = 107 bits (54), Expect = 1e-19 Identities = 81/90 (90%) Strand = Plus / Plus Query: 592 ggtcagctcaaagcagaaggaaaccagtagcaccagtgggatgcgagacactgtcgaaac 651 |||||| ||||||||||||||||| |||||||| |||||||||||||||| ||| ||||| Sbjct: 424333 ggtcagttcaaagcagaaggaaacaagtagcactagtgggatgcgagacagtgttgaaac 424392 Query: 652 aagccccctcttgcagtacagggcccaggt 681 ||| ||||| ||||| || ||||||||||| Sbjct: 424393 aagtccccttttgcaatatagggcccaggt 424422 Score = 107 bits (54), Expect = 1e-19 Identities = 81/90 (90%) Strand = Plus / Minus Query: 592 ggtcagctcaaagcagaaggaaaccagtagcaccagtgggatgcgagacactgtcgaaac 651 |||||| ||||||||||||||||| |||||||| |||||||||||||||| ||| ||||| Sbjct: 498455 ggtcagttcaaagcagaaggaaacaagtagcactagtgggatgcgagacagtgttgaaac 498396 Query: 652 aagccccctcttgcagtacagggcccaggt 681 ||| ||||| ||||| || ||||||||||| Sbjct: 498395 aagtccccttttgcaatatagggcccaggt 498366 Score = 97.6 bits (49), Expect = 1e-16 Identities = 55/57 (96%) Strand = Plus / Plus Query: 455 tctggaagtgcatgccgcagtatatatggtggatttgtgaaatggtgtatgggaaaa 511 ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 423901 tctggaagtgcatgccgcagtatatatgggggattcgtgaaatggtgtatgggaaaa 423957 Score = 97.6 bits (49), Expect = 1e-16 Identities = 55/57 (96%) Strand = Plus / Minus Query: 455 tctggaagtgcatgccgcagtatatatggtggatttgtgaaatggtgtatgggaaaa 511 ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 498894 tctggaagtgcatgccgcagtatatatgggggattcgtgaaatggtgtatgggaaaa 498838 Score = 89.7 bits (45), Expect = 3e-14 Identities = 96/113 (84%) Strand = Plus / Minus Query: 1125 ccgagccaaaaattcaagggtgacgttagctacttcatttgcagcaggcctggggctggc 1184 |||||||||||||||||||| || || ||||||||||| || ||||||| ||| |||||| Sbjct: 497064 ccgagccaaaaattcaagggagatgtgagctacttcatctgtagcaggcttggagctggc 497005 Query: 1185 ccaaaagttcttaccgacgagagccacacattgattgattcagccacggggct 1237 ||||||||| | || ||||| |||| ||||||| ||||| | ||||||||| Sbjct: 497004 ccaaaagttgtcactgacgaaagcctagcattgatcgattcggtcacggggct 496952 Score = 87.7 bits (44), Expect = 1e-13 Identities = 53/56 (94%) Strand = Plus / Minus Query: 762 cacaggataattagccttgtggagaagtggaaccacgcggaaggaaccccacaggt 817 ||||||||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 497971 cacaggataattagccttgtggagaagtggaaccagtcagaaggaaccccacaggt 497916 Score = 65.9 bits (33), Expect = 4e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 813 caggttgcctacacatttgatgctgggcctaacgctgtcctaatagcacgaaaccgcaaa 872 |||||||| ||||| || ||||||||||| || ||||||||||| |||| |||||||||| Sbjct: 497355 caggttgcttacaccttcgatgctgggcccaatgctgtcctaatcgcaccaaaccgcaaa 497296 Query: 873 a 873 | Sbjct: 497295 a 497295 Score = 50.1 bits (25), Expect = 0.022 Identities = 64/77 (83%) Strand = Plus / Plus Query: 518 gatggaagtgacagtatggcagtgcagcttgttgacgagtcgcattgggatgatcttgtc 577 |||||||||||||| || || || || |||| ||| ||| | || ||| |||||||||| Sbjct: 424061 gatggaagtgacagcatagctgtacaacttgctgatgaggcacactggaatgatcttgtt 424120 Query: 578 ataatcatagcagtggt 594 || |||||||||||||| Sbjct: 424121 attatcatagcagtggt 424137
>dbj|AP004769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017C12 Length = 135356 Score = 285 bits (144), Expect = 2e-73 Identities = 201/220 (91%) Strand = Plus / Minus Query: 30 atggcgacggaggcggaggcgcagtgggtgctgacggccacggggcggtcgccaactaac 89 |||||| ||| || ||||| |||||||||||| | |||||| || || || || || ||| Sbjct: 96375 atggcggcggcggaggaggggcagtgggtgctcatggccaccggccgatctcccaccaac 96316 Query: 90 atcgccgtgatcaagtactgggggaagcgggacgaggcgctcatcctccctgtcaacgac 149 |||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 96315 atcgccgtcatcaagtactgggggaagagggacgaggcgctcatcctccccgtcaacgac 96256 Query: 150 agcatcagcgtcaccctcgaccccgaccacctctccgccaccaccaccgtcgccgccagc 209 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 96255 agcatcagcgtcaccctcgaccccgaccacctctccgccaccaccaccgtcgccgtcagc 96196 Query: 210 cccgccttcccctccgaccgcatgtggctcaacggaaagg 249 || ||||||||||||||||||||||||||||||| |||| Sbjct: 96195 ccttccttcccctccgaccgcatgtggctcaacggcaagg 96156 Score = 281 bits (142), Expect = 3e-72 Identities = 202/222 (90%) Strand = Plus / Plus Query: 28 caatggcgacggaggcggaggcgcagtgggtgctgacggccacggggcggtcgccaacta 87 |||||||| ||| || ||||| |||||||||||| | |||||| || || || || || | Sbjct: 18933 caatggcggcggcggaggaggggcagtgggtgctcatggccaccggccgatctcccacca 18992 Query: 88 acatcgccgtgatcaagtactgggggaagcgggacgaggcgctcatcctccctgtcaacg 147 |||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 18993 acatcgccgtcatcaagtactgggggaagagggacgaggcgctcatcctccccgtcaacg 19052 Query: 148 acagcatcagcgtcaccctcgaccccgaccacctctccgccaccaccaccgtcgccgcca 207 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 19053 acagcatcagcgtcaccctcgaccccgaccacctctccgccaccaccaccgtcgccgtca 19112 Query: 208 gccccgccttcccctccgaccgcatgtggctcaacggaaagg 249 |||| |||||||||||||||| |||||||||||||| |||| Sbjct: 19113 gcccttccttcccctccgaccggatgtggctcaacggcaagg 19154 Score = 196 bits (99), Expect = 2e-46 Identities = 168/191 (87%) Strand = Plus / Minus Query: 258 ttgtcgggcgggaggtttcagagttgcctgagggagatccggaagcgggctcgtgatgta 317 ||||| || |||||||||||||| ||||||||||||||||||||||| |||| ||||| Sbjct: 95676 ttgtcaggagggaggtttcagagctgcctgagggagatccggaagcgtgctcaagatgtc 95617 Query: 318 gaggacgagaaaaaggggatcaaggtcaagaaagaggactgggagaagttgcatgtccac 377 ||||| ||||| |||||||||| | |||||||||||||||||| |||| | ||||| ||| Sbjct: 95616 gaggatgagaagaaggggatcaggatcaagaaagaggactgggggaagctacatgtacac 95557 Query: 378 attgcgtcgtacaacaacttcccaaccgctgccggtttggcctcttcggctgctggcttt 437 || || |||| |||||||||||| || ||||| |||||||||||||||||||||||||| Sbjct: 95556 atagcatcgttcaacaacttccccactgctgctggtttggcctcttcggctgctggcttg 95497 Query: 438 gcttgtcttgg 448 |||||| |||| Sbjct: 95496 gcttgttttgg 95486 Score = 172 bits (87), Expect = 2e-39 Identities = 156/179 (87%) Strand = Plus / Plus Query: 258 ttgtcgggcgggaggtttcagagttgcctgagggagatccggaagcgggctcgtgatgta 317 ||||| || |||||||| ||||| ||||| ||||||||||||||||| |||| ||||| Sbjct: 19607 ttgtcaggagggaggttccagagctgcctcagggagatccggaagcgtgctcaagatgtc 19666 Query: 318 gaggacgagaaaaaggggatcaaggtcaagaaagaggactgggagaagttgcatgtccac 377 ||||| ||||| |||||||||| | |||||||||||||||||| |||| | ||||| ||| Sbjct: 19667 gaggatgagaagaaggggatcaggatcaagaaagaggactgggggaagctacatgtacac 19726 Query: 378 attgcgtcgtacaacaacttcccaaccgctgccggtttggcctcttcggctgctggctt 436 || || ||||||||||||||||| || ||||| |||||||||||||||| ||||||||| Sbjct: 19727 atagcatcgtacaacaacttccccactgctgctggtttggcctcttcggttgctggctt 19785 Score = 143 bits (72), Expect = 2e-30 Identities = 87/92 (94%) Strand = Plus / Minus Query: 676 ccaggttaacttgtgcagatagcaaccagtttcatgctgtatgtttggacacgagtcctc 735 |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 94385 ccaggttaacttgtgcagatagcaaccaatttcatgctgtatgtttggacacgagccctc 94326 Query: 736 ccatcttctacatgaatgatacgtcacacagg 767 |||||||||| ||||| ||||| ||||||||| Sbjct: 94325 ccatcttctatatgaacgatacatcacacagg 94294 Score = 107 bits (54), Expect = 1e-19 Identities = 81/90 (90%) Strand = Plus / Plus Query: 592 ggtcagctcaaagcagaaggaaaccagtagcaccagtgggatgcgagacactgtcgaaac 651 |||||| ||||||||||||||||| |||||||| |||||||||||||||| ||| ||||| Sbjct: 20574 ggtcagttcaaagcagaaggaaacaagtagcactagtgggatgcgagacagtgttgaaac 20633 Query: 652 aagccccctcttgcagtacagggcccaggt 681 ||| ||||| ||||| || ||||||||||| Sbjct: 20634 aagtccccttttgcaatatagggcccaggt 20663 Score = 107 bits (54), Expect = 1e-19 Identities = 81/90 (90%) Strand = Plus / Minus Query: 592 ggtcagctcaaagcagaaggaaaccagtagcaccagtgggatgcgagacactgtcgaaac 651 |||||| ||||||||||||||||| |||||||| |||||||||||||||| ||| ||||| Sbjct: 94696 ggtcagttcaaagcagaaggaaacaagtagcactagtgggatgcgagacagtgttgaaac 94637 Query: 652 aagccccctcttgcagtacagggcccaggt 681 ||| ||||| ||||| || ||||||||||| Sbjct: 94636 aagtccccttttgcaatatagggcccaggt 94607 Score = 97.6 bits (49), Expect = 1e-16 Identities = 55/57 (96%) Strand = Plus / Plus Query: 455 tctggaagtgcatgccgcagtatatatggtggatttgtgaaatggtgtatgggaaaa 511 ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 20142 tctggaagtgcatgccgcagtatatatgggggattcgtgaaatggtgtatgggaaaa 20198 Score = 97.6 bits (49), Expect = 1e-16 Identities = 55/57 (96%) Strand = Plus / Minus Query: 455 tctggaagtgcatgccgcagtatatatggtggatttgtgaaatggtgtatgggaaaa 511 ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 95135 tctggaagtgcatgccgcagtatatatgggggattcgtgaaatggtgtatgggaaaa 95079 Score = 89.7 bits (45), Expect = 3e-14 Identities = 96/113 (84%) Strand = Plus / Minus Query: 1125 ccgagccaaaaattcaagggtgacgttagctacttcatttgcagcaggcctggggctggc 1184 |||||||||||||||||||| || || ||||||||||| || ||||||| ||| |||||| Sbjct: 93305 ccgagccaaaaattcaagggagatgtgagctacttcatctgtagcaggcttggagctggc 93246 Query: 1185 ccaaaagttcttaccgacgagagccacacattgattgattcagccacggggct 1237 ||||||||| | || ||||| |||| ||||||| ||||| | ||||||||| Sbjct: 93245 ccaaaagttgtcactgacgaaagcctagcattgatcgattcggtcacggggct 93193 Score = 87.7 bits (44), Expect = 1e-13 Identities = 53/56 (94%) Strand = Plus / Minus Query: 762 cacaggataattagccttgtggagaagtggaaccacgcggaaggaaccccacaggt 817 ||||||||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 94212 cacaggataattagccttgtggagaagtggaaccagtcagaaggaaccccacaggt 94157 Score = 65.9 bits (33), Expect = 4e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 813 caggttgcctacacatttgatgctgggcctaacgctgtcctaatagcacgaaaccgcaaa 872 |||||||| ||||| || ||||||||||| || ||||||||||| |||| |||||||||| Sbjct: 93596 caggttgcttacaccttcgatgctgggcccaatgctgtcctaatcgcaccaaaccgcaaa 93537 Query: 873 a 873 | Sbjct: 93536 a 93536 Score = 50.1 bits (25), Expect = 0.022 Identities = 64/77 (83%) Strand = Plus / Plus Query: 518 gatggaagtgacagtatggcagtgcagcttgttgacgagtcgcattgggatgatcttgtc 577 |||||||||||||| || || || || |||| ||| ||| | || ||| |||||||||| Sbjct: 20302 gatggaagtgacagcatagctgtacaacttgctgatgaggcacactggaatgatcttgtt 20361 Query: 578 ataatcatagcagtggt 594 || |||||||||||||| Sbjct: 20362 attatcatagcagtggt 20378
>gb|BT009599.1| Triticum aestivum clone wre1n.pk0076.b10:fis, full insert mRNA sequence Length = 645 Score = 230 bits (116), Expect = 1e-56 Identities = 203/232 (87%) Strand = Plus / Plus Query: 1026 gacagctatatggtcggcgataaatcaatcctaagtgacgccggagtgcaatccttagct 1085 |||||||||||| ||||||||||||| |||||||| || || || |||||||| |||| Sbjct: 136 gacagctatatgctcggcgataaatcgatcctaagcgatgctggtttgcaatccatagcc 195 Query: 1086 gacatcgaggcccttccaccgcccccggagatgaagtcaccgagccaaaaattcaagggt 1145 || |||||||||||||| |||| ||||||||||| | || | |||||||||||| ||| Sbjct: 196 gatgtcgaggcccttccagcgcctccggagatgaaagctccaaaccaaaaattcaaaggt 255 Query: 1146 gacgttagctacttcatttgcagcaggcctggggctggcccaaaagttcttaccgacgag 1205 || |||||||||||||| || |||||||||||||| |||||||||||||| ||||| ||| Sbjct: 256 gatgttagctacttcatctgtagcaggcctggggccggcccaaaagttctcaccgatgag 315 Query: 1206 agccacacattgattgattcagccacggggcttgcgaaaggagtgtaatttt 1257 ||||| | ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 316 agccatgccttgattgattcagccacagggcttgcgaaaggagtgtaatttt 367 Score = 125 bits (63), Expect = 5e-25 Identities = 93/103 (90%) Strand = Plus / Plus Query: 803 aggaaccccacaggttgcctacacatttgatgctgggcctaacgctgtcctaatagcacg 862 |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 6 aggaacaccacaggttgcctacacatttgatgctgggcctaacgctgtcttaatagcacg 65 Query: 863 aaaccgcaaaacagcttcgcttgtccttcagaggctcttatac 905 ||||||||||| | | ||| ||||||||||||| |||||| Sbjct: 66 gaaccgcaaaactggcacccttctccttcagaggcttttatac 108 Score = 56.0 bits (28), Expect = 4e-04 Identities = 38/40 (95%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 1311 gttgagattaatgtagaattgtcatgtgtgttgtacactc 1350 |||||||||||||||||||||||| || |||||||||||| Sbjct: 399 gttgagattaatgtagaattgtcacgt-tgttgtacactc 437
>ref|NM_115285.1| Arabidopsis thaliana ATP binding / diphosphomevalonate decarboxylase/ kinase (AT3G54250) mRNA, complete cds Length = 1464 Score = 103 bits (52), Expect = 2e-18 Identities = 124/148 (83%) Strand = Plus / Plus Query: 691 cagatagcaaccagtttcatgctgtatgtttggacacgagtcctcccatcttctacatga 750 ||||||| || |||||||||||||| ||| |||| || ||| ||||| |||||||||| Sbjct: 832 cagatagtaatcagtttcatgctgtttgtctggatacatctccacccatattctacatga 891 Query: 751 atgatacgtcacacaggataattagccttgtggagaagtggaaccacgcggaaggaaccc 810 |||| || |||||||| ||||||||| | || || |||||||||| | ||||| || | Sbjct: 892 atgacacttcacacagaataattagcttagttgaaaagtggaaccgttctgaagggacac 951 Query: 811 cacaggttgcctacacatttgatgctgg 838 |||||||||| ||||||||||||||||| Sbjct: 952 cacaggttgcttacacatttgatgctgg 979 Score = 60.0 bits (30), Expect = 2e-05 Identities = 126/158 (79%) Strand = Plus / Plus Query: 458 ggaagtgcatgccgcagtatatatggtggatttgtgaaatggtgtatgggaaaaaatgac 517 |||||||| ||||| ||| ||| |||||||||||| || ||| ||||||| || || Sbjct: 528 ggaagtgcttgccggagtttatttggtggatttgtcaagtggacaatgggaagcaaagaa 587 Query: 518 gatggaagtgacagtatggcagtgcagcttgttgacgagtcgcattgggatgatcttgtc 577 |||||||||||||| | ||||| || || | || ||| |||||||||||||||||| Sbjct: 588 gatggaagtgacagcgttgcagttcaactggcagatgagaagcattgggatgatcttgtt 647 Query: 578 ataatcatagcagtggtcagctcaaagcagaaggaaac 615 || ||||| || ||||| || ||| |||||||||||| Sbjct: 648 atcatcattgctgtggtgagttcacggcagaaggaaac 685 Score = 42.1 bits (21), Expect = 5.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 393 aacttcccaaccgctgccggtttggcctcttcggctgctggctttgcttgtct 445 |||||||| || ||||| || || || ||||| |||||||| ||||||||||| Sbjct: 399 aacttccctactgctgctggcttagcatcttcagctgctggatttgcttgtct 451
>gb|AY087654.1| Arabidopsis thaliana clone 37377 mRNA, complete sequence Length = 1464 Score = 103 bits (52), Expect = 2e-18 Identities = 124/148 (83%) Strand = Plus / Plus Query: 691 cagatagcaaccagtttcatgctgtatgtttggacacgagtcctcccatcttctacatga 750 ||||||| || |||||||||||||| ||| |||| || ||| ||||| |||||||||| Sbjct: 832 cagatagtaatcagtttcatgctgtttgtctggatacatctccacccatattctacatga 891 Query: 751 atgatacgtcacacaggataattagccttgtggagaagtggaaccacgcggaaggaaccc 810 |||| || |||||||| ||||||||| | || || |||||||||| | ||||| || | Sbjct: 892 atgacacttcacacagaataattagcttagttgaaaagtggaaccgttctgaagggacac 951 Query: 811 cacaggttgcctacacatttgatgctgg 838 |||||||||| ||||||||||||||||| Sbjct: 952 cacaggttgcttacacatttgatgctgg 979 Score = 60.0 bits (30), Expect = 2e-05 Identities = 126/158 (79%) Strand = Plus / Plus Query: 458 ggaagtgcatgccgcagtatatatggtggatttgtgaaatggtgtatgggaaaaaatgac 517 |||||||| ||||| ||| ||| |||||||||||| || ||| ||||||| || || Sbjct: 528 ggaagtgcttgccggagtttatttggtggatttgtcaagtggacaatgggaagcaaagaa 587 Query: 518 gatggaagtgacagtatggcagtgcagcttgttgacgagtcgcattgggatgatcttgtc 577 |||||||||||||| | ||||| || || | || ||| |||||||||||||||||| Sbjct: 588 gatggaagtgacagcgttgcagttcaactggcagatgagaagcattgggatgatcttgtt 647 Query: 578 ataatcatagcagtggtcagctcaaagcagaaggaaac 615 || ||||| || ||||| || ||| |||||||||||| Sbjct: 648 atcatcattgctgtggtgagttcacggcagaaggaaac 685 Score = 42.1 bits (21), Expect = 5.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 393 aacttcccaaccgctgccggtttggcctcttcggctgctggctttgcttgtct 445 |||||||| || ||||| || || || ||||| |||||||| ||||||||||| Sbjct: 399 aacttccctactgctgctggcttagcatcttcagctgctggatttgcttgtct 451
>gb|BT013122.1| Lycopersicon esculentum clone 114412R, mRNA sequence Length = 1709 Score = 89.7 bits (45), Expect = 3e-14 Identities = 132/161 (81%) Strand = Plus / Plus Query: 696 agcaaccagtttcatgctgtatgtttggacacgagtcctcccatcttctacatgaatgat 755 ||||| || |||||||| || || ||||||| || ||||| || |||||||||||||| Sbjct: 994 agcaatcaatttcatgcagtctgcatggacactagccctcctatattctacatgaatgac 1053 Query: 756 acgtcacacaggataattagccttgtggagaagtggaaccacgcggaaggaaccccacag 815 || || || ||| |||||||| ||| ||||| ||||||| || |||||||| |||||| Sbjct: 1054 acatctcatagggtaattagctgtgtcgagaaatggaaccgtgcagaaggaactccacag 1113 Query: 816 gttgcctacacatttgatgctgggcctaacgctgtcctaat 856 ||||| ||||| || ||||||||||| || ||||| ||||| Sbjct: 1114 gttgcatacaccttcgatgctgggccaaatgctgttctaat 1154 Score = 61.9 bits (31), Expect = 6e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 563 tgggatgatcttgtcataatcatagcagtggtcagctcaaagcagaaggaaaccagtagc 622 |||||||| ||||| || ||||| |||||||| |||||| |||||||||||| |||||| Sbjct: 790 tgggatgagcttgttatcatcattgcagtggttagctcacggcagaaggaaacaagtagc 849 Query: 623 acc 625 ||| Sbjct: 850 acc 852
>gb|DQ631830.1| Arnebia euchroma mevalonate disphosphate decarboxylase (MVDD) mRNA, complete cds Length = 1526 Score = 81.8 bits (41), Expect = 6e-12 Identities = 134/165 (81%) Strand = Plus / Plus Query: 685 cttgtgcagatagcaaccagtttcatgctgtatgtttggacacgagtcctcccatcttct 744 ||||| ||||||| || |||||||| ||||| || | || || ||||| |||||||| | Sbjct: 858 cttgttcagatagtaatcagtttcacgctgtttgcctagatactagtccacccatctttt 917 Query: 745 acatgaatgatacgtcacacaggataattagccttgtggagaagtggaaccacgcggaag 804 |||||||||| || || |||||||| || ||||| || ||||| ||||| | | | || | Sbjct: 918 acatgaatgacacatctcacaggattatcagcctggtcgagaaatggaatcgctccgagg 977 Query: 805 gaaccccacaggttgcctacacatttgatgctgggcctaacgctg 849 |||| || |||||||| || || |||||||||||||| ||||||| Sbjct: 978 gaacacctcaggttgcttatacttttgatgctgggccaaacgctg 1022
>gb|AF429386.1|AF429386 Hevea brasiliensis mevalonate disphosphate decarboxylase mRNA, complete cds Length = 1697 Score = 73.8 bits (37), Expect = 2e-09 Identities = 145/181 (80%) Strand = Plus / Plus Query: 681 ttaacttgtgcagatagcaaccagtttcatgctgtatgtttggacacgagtcctcccatc 740 ||||| ||||| ||||| |||||||| |||||||| || |||| || ||||||| || Sbjct: 843 ttaacatgtgctgatagtaaccagttccatgctgtctgcatggatacatgtcctccaatt 902 Query: 741 ttctacatgaatgatacgtcacacaggataattagccttgtggagaagtggaaccacgcg 800 ||||||||||| ||||| |||||||||||||| ||| ||| || || ||||| | | Sbjct: 903 ttctacatgaacgatacatcacacaggataatcagctgtgttgaaaaatggaatcgttct 962 Query: 801 gaaggaaccccacaggttgcctacacatttgatgctgggcctaacgctgtcctaatagca 860 | |||||| || ||||| || || || ||||||||||||||||| || || ||||| ||| Sbjct: 963 gtaggaacacctcaggtggcttatacttttgatgctgggcctaatgcagttctaattgca 1022 Query: 861 c 861 | Sbjct: 1023 c 1023 Score = 56.0 bits (28), Expect = 4e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 352 aggactgggagaagttgcatgtccacattgcgtcgtacaacaacttcccaaccgctgccg 411 |||| |||||||| ||| |||| || || || || || ||||| ||||| || ||||| | Sbjct: 379 aggattgggagaaattgtatgtacatatagcttcatataacaatttccctactgctgctg 438 Query: 412 gtttggcctcttcggctgctggctttgcttgtcttg 447 | ||||| ||||| |||||||| ||||||||||||| Sbjct: 439 gattggcttcttcagctgctggttttgcttgtcttg 474 Score = 46.1 bits (23), Expect = 0.35 Identities = 134/171 (78%) Strand = Plus / Plus Query: 481 tggtggatttgtgaaatggtgtatgggaaaaaatgacgatggaagtgacagtatggcagt 540 ||||||||||||||| ||| |||||||| ||| |||||||||||||| | || || Sbjct: 572 tggtggatttgtgaagtggaaaatgggaaaggttgaggatggaagtgacagccttgctgt 631 Query: 541 gcagcttgttgacgagtcgcattgggatgatcttgtcataatcatagcagtggtcagctc 600 || |||| || ||| ||| |||||||||||||| || || || || ||||| || || Sbjct: 632 tcaagttgtagatgagaagcactgggatgatcttgttattattattgctgtggtaagttc 691 Query: 601 aaagcagaaggaaaccagtagcaccagtgggatgcgagacactgtcgaaac 651 | |||||| ||||| |||||||||| || ||||| || ||||| ||||| Sbjct: 692 acggcagaaagaaacgagtagcaccacaggaatgcgtgagactgttgaaac 742
>dbj|AB183750.1| Streptomyces sp. KO-3988 viguiepinol [3-hydroxypimara-9(11),15-diene] biosynthetic gene cluster and mevalonate gene cluster, complete cds Length = 19462 Score = 61.9 bits (31), Expect = 6e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 87 aacatcgccgtgatcaagtactgggggaagcgggacgag 125 |||||||| ||||||||||||||||||||||||||||| Sbjct: 6457 aacatcgcgctgatcaagtactgggggaagcgggacgag 6495
>dbj|AK228357.1| Arabidopsis thaliana mRNA for mevalonate diphosphate decarboxylase, complete cds, clone: RAFL14-77-O10 Length = 1511 Score = 60.0 bits (30), Expect = 2e-05 Identities = 78/94 (82%) Strand = Plus / Plus Query: 702 cagtttcatgctgtatgtttggacacgagtcctcccatcttctacatgaatgatacgtca 761 |||||||||||||| ||| |||| || ||| ||||| |||||||||||||| || || Sbjct: 864 cagtttcatgctgtttgtatggatacatctccacccatattctacatgaatgacacctcc 923 Query: 762 cacaggataattagccttgtggagaagtggaacc 795 ||||||||||| ||| | || || |||||||||| Sbjct: 924 cacaggataatcagcttagttgaaaagtggaacc 957 Score = 56.0 bits (28), Expect = 4e-04 Identities = 133/168 (79%) Strand = Plus / Plus Query: 458 ggaagtgcatgccgcagtatatatggtggatttgtgaaatggtgtatgggaaaaaatgac 517 |||||||| ||||| ||| ||| ||| |||||||| || ||| ||||||||| || || Sbjct: 549 ggaagtgcttgccgtagtttatttgggggatttgtcaagtggaatatgggaaacaaagaa 608 Query: 518 gatggaagtgacagtatggcagtgcagcttgttgacgagtcgcattgggatgatcttgtc 577 ||||||||||||||| | ||||| || || || || || ||| |||||||||||||| Sbjct: 609 gatggaagtgacagtgttgcagttcaactggtagatgataagcactgggatgatcttgtt 668 Query: 578 ataatcatagcagtggtcagctcaaagcagaaggaaaccagtagcacc 625 || || || || ||||| || ||| ||||||||||| || |||||| Sbjct: 669 atcattattgctgtggttagttcacgacagaaggaaacaagcagcacc 716 Score = 52.0 bits (26), Expect = 0.006 Identities = 71/86 (82%) Strand = Plus / Plus Query: 357 tgggagaagttgcatgtccacattgcgtcgtacaacaacttcccaaccgctgccggtttg 416 ||||||||| ||||| | |||||||| || | ||||||||||| || ||||| || || Sbjct: 384 tgggagaagctgcatctgcacattgcttctcataacaacttccctactgctgctggctta 443 Query: 417 gcctcttcggctgctggctttgcttg 442 || ||||| |||||||| |||||||| Sbjct: 444 gcatcttctgctgctggttttgcttg 469
>ref|NM_129427.3| Arabidopsis thaliana MVD1 (MVD1) mRNA, complete cds Length = 1621 Score = 60.0 bits (30), Expect = 2e-05 Identities = 78/94 (82%) Strand = Plus / Plus Query: 702 cagtttcatgctgtatgtttggacacgagtcctcccatcttctacatgaatgatacgtca 761 |||||||||||||| ||| |||| || ||| ||||| |||||||||||||| || || Sbjct: 959 cagtttcatgctgtttgtatggatacatctccacccatattctacatgaatgacacctcc 1018 Query: 762 cacaggataattagccttgtggagaagtggaacc 795 ||||||||||| ||| | || || |||||||||| Sbjct: 1019 cacaggataatcagcttagttgaaaagtggaacc 1052 Score = 56.0 bits (28), Expect = 4e-04 Identities = 133/168 (79%) Strand = Plus / Plus Query: 458 ggaagtgcatgccgcagtatatatggtggatttgtgaaatggtgtatgggaaaaaatgac 517 |||||||| ||||| ||| ||| ||| |||||||| || ||| ||||||||| || || Sbjct: 644 ggaagtgcttgccgtagtttatttgggggatttgtcaagtggaatatgggaaacaaagaa 703 Query: 518 gatggaagtgacagtatggcagtgcagcttgttgacgagtcgcattgggatgatcttgtc 577 ||||||||||||||| | ||||| || || || || || ||| |||||||||||||| Sbjct: 704 gatggaagtgacagtgttgcagttcaactggtagatgataagcactgggatgatcttgtt 763 Query: 578 ataatcatagcagtggtcagctcaaagcagaaggaaaccagtagcacc 625 || || || || ||||| || ||| ||||||||||| || |||||| Sbjct: 764 atcattattgctgtggttagttcacgacagaaggaaacaagcagcacc 811 Score = 52.0 bits (26), Expect = 0.006 Identities = 71/86 (82%) Strand = Plus / Plus Query: 357 tgggagaagttgcatgtccacattgcgtcgtacaacaacttcccaaccgctgccggtttg 416 ||||||||| ||||| | |||||||| || | ||||||||||| || ||||| || || Sbjct: 479 tgggagaagctgcatctgcacattgcttctcataacaacttccctactgctgctggctta 538 Query: 417 gcctcttcggctgctggctttgcttg 442 || ||||| |||||||| |||||||| Sbjct: 539 gcatcttctgctgctggttttgcttg 564
>gb|BT008769.1| Arabidopsis thaliana At2g38700 gene, complete cds Length = 1239 Score = 60.0 bits (30), Expect = 2e-05 Identities = 78/94 (82%) Strand = Plus / Plus Query: 702 cagtttcatgctgtatgtttggacacgagtcctcccatcttctacatgaatgatacgtca 761 |||||||||||||| ||| |||| || ||| ||||| |||||||||||||| || || Sbjct: 799 cagtttcatgctgtttgtatggatacatctccacccatattctacatgaatgacacctcc 858 Query: 762 cacaggataattagccttgtggagaagtggaacc 795 ||||||||||| ||| | || || |||||||||| Sbjct: 859 cacaggataatcagcttagttgaaaagtggaacc 892 Score = 56.0 bits (28), Expect = 4e-04 Identities = 133/168 (79%) Strand = Plus / Plus Query: 458 ggaagtgcatgccgcagtatatatggtggatttgtgaaatggtgtatgggaaaaaatgac 517 |||||||| ||||| ||| ||| ||| |||||||| || ||| ||||||||| || || Sbjct: 484 ggaagtgcttgccgtagtttatttgggggatttgtcaagtggaatatgggaaacaaagaa 543 Query: 518 gatggaagtgacagtatggcagtgcagcttgttgacgagtcgcattgggatgatcttgtc 577 ||||||||||||||| | ||||| || || || || || ||| |||||||||||||| Sbjct: 544 gatggaagtgacagtgttgcagttcaactggtagatgataagcactgggatgatcttgtt 603 Query: 578 ataatcatagcagtggtcagctcaaagcagaaggaaaccagtagcacc 625 || || || || ||||| || ||| ||||||||||| || |||||| Sbjct: 604 atcattattgctgtggttagttcacgacagaaggaaacaagcagcacc 651 Score = 52.0 bits (26), Expect = 0.006 Identities = 71/86 (82%) Strand = Plus / Plus Query: 357 tgggagaagttgcatgtccacattgcgtcgtacaacaacttcccaaccgctgccggtttg 416 ||||||||| ||||| | |||||||| || | ||||||||||| || ||||| || || Sbjct: 319 tgggagaagctgcatctgcacattgcttctcataacaacttccctactgctgctggctta 378 Query: 417 gcctcttcggctgctggctttgcttg 442 || ||||| |||||||| |||||||| Sbjct: 379 gcatcttctgctgctggttttgcttg 404
>emb|Y14325.1|ATY14325 Arabidopsis thaliana mRNA for mevalonate diphosphate decarboxylase Length = 1694 Score = 60.0 bits (30), Expect = 2e-05 Identities = 78/94 (82%) Strand = Plus / Plus Query: 702 cagtttcatgctgtatgtttggacacgagtcctcccatcttctacatgaatgatacgtca 761 |||||||||||||| ||| |||| || ||| ||||| |||||||||||||| || || Sbjct: 916 cagtttcatgctgtttgtatggatacatctccacccatattctacatgaatgacacctcc 975 Query: 762 cacaggataattagccttgtggagaagtggaacc 795 ||||||||||| ||| | || || |||||||||| Sbjct: 976 cacaggataatcagcttagttgaaaagtggaacc 1009 Score = 56.0 bits (28), Expect = 4e-04 Identities = 133/168 (79%) Strand = Plus / Plus Query: 458 ggaagtgcatgccgcagtatatatggtggatttgtgaaatggtgtatgggaaaaaatgac 517 |||||||| ||||| ||| ||| ||| |||||||| || ||| ||||||||| || || Sbjct: 601 ggaagtgcttgccgtagtttatttgggggatttgtcaagtggaatatgggaaacaaagaa 660 Query: 518 gatggaagtgacagtatggcagtgcagcttgttgacgagtcgcattgggatgatcttgtc 577 ||||||||||||||| | ||||| || || || || || ||| |||||||||||||| Sbjct: 661 gatggaagtgacagtgttgcagttcaactggtagatgataagcactgggatgatcttgtt 720 Query: 578 ataatcatagcagtggtcagctcaaagcagaaggaaaccagtagcacc 625 || || || || ||||| || ||| ||||||||||| || |||||| Sbjct: 721 atcattattgctgtggttagttcacgacagaaggaaacaagcagcacc 768 Score = 54.0 bits (27), Expect = 0.001 Identities = 63/75 (84%) Strand = Plus / Minus Query: 458 ggaagtgcatgccgcagtatatatggtggatttgtgaaatggtgtatgggaaaaaatgac 517 |||||||| ||||| ||| ||| ||| |||||||| || ||| ||||||||| || || Sbjct: 1656 ggaagtgcttgccgtagtttatttgggggatttgtcaagtggaatatgggaaacaaagaa 1597 Query: 518 gatggaagtgacagt 532 ||||||||||||||| Sbjct: 1596 gatggaagtgacagt 1582 Score = 52.0 bits (26), Expect = 0.006 Identities = 71/86 (82%) Strand = Plus / Plus Query: 357 tgggagaagttgcatgtccacattgcgtcgtacaacaacttcccaaccgctgccggtttg 416 ||||||||| ||||| | |||||||| || | ||||||||||| || ||||| || || Sbjct: 436 tgggagaagctgcatctgcacattgcttctcataacaacttccctactgctgctggctta 495 Query: 417 gcctcttcggctgctggctttgcttg 442 || ||||| |||||||| |||||||| Sbjct: 496 gcatcttctgctgctggttttgcttg 521
>gb|AY087442.1| Arabidopsis thaliana clone 35493 mRNA, complete sequence Length = 1541 Score = 60.0 bits (30), Expect = 2e-05 Identities = 78/94 (82%) Strand = Plus / Plus Query: 702 cagtttcatgctgtatgtttggacacgagtcctcccatcttctacatgaatgatacgtca 761 |||||||||||||| ||| |||| || ||| ||||| |||||||||||||| || || Sbjct: 894 cagtttcatgctgtttgtatggatacatctccacccatattctacatgaatgacacctcc 953 Query: 762 cacaggataattagccttgtggagaagtggaacc 795 ||||||||||| ||| | || || |||||||||| Sbjct: 954 cacaggataatcagcttagttgaaaagtggaacc 987 Score = 56.0 bits (28), Expect = 4e-04 Identities = 133/168 (79%) Strand = Plus / Plus Query: 458 ggaagtgcatgccgcagtatatatggtggatttgtgaaatggtgtatgggaaaaaatgac 517 |||||||| ||||| ||| ||| ||| |||||||| || ||| ||||||||| || || Sbjct: 579 ggaagtgcttgccgtagtttatttgggggatttgtcaagtggaatatgggaaacaaagaa 638 Query: 518 gatggaagtgacagtatggcagtgcagcttgttgacgagtcgcattgggatgatcttgtc 577 ||||||||||||||| | ||||| || || || || || ||| |||||||||||||| Sbjct: 639 gatggaagtgacagtgttgcagttcaactggtagatgataagcactgggatgatcttgtt 698 Query: 578 ataatcatagcagtggtcagctcaaagcagaaggaaaccagtagcacc 625 || || || || ||||| || ||| ||||||||||| || |||||| Sbjct: 699 atcattattgctgtggttagttcacgacagaaggaaacaagcagcacc 746 Score = 52.0 bits (26), Expect = 0.006 Identities = 71/86 (82%) Strand = Plus / Plus Query: 357 tgggagaagttgcatgtccacattgcgtcgtacaacaacttcccaaccgctgccggtttg 416 ||||||||| ||||| | |||||||| || | ||||||||||| || ||||| || || Sbjct: 414 tgggagaagctgcatctgcacattgcttctcataacaacttccctactgctgctggctta 473 Query: 417 gcctcttcggctgctggctttgcttg 442 || ||||| |||||||| |||||||| Sbjct: 474 gcatcttctgctgctggttttgcttg 499
>emb|BX819898.1|CNS0A83Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS45ZB07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1609 Score = 60.0 bits (30), Expect = 2e-05 Identities = 78/94 (82%) Strand = Plus / Plus Query: 702 cagtttcatgctgtatgtttggacacgagtcctcccatcttctacatgaatgatacgtca 761 |||||||||||||| ||| |||| || ||| ||||| |||||||||||||| || || Sbjct: 960 cagtttcatgctgtttgtatggatacatctccacccatattctacatgaatgacacctcc 1019 Query: 762 cacaggataattagccttgtggagaagtggaacc 795 ||||||||||| ||| | || || |||||||||| Sbjct: 1020 cacaggataatcagcttagttgaaaagtggaacc 1053 Score = 56.0 bits (28), Expect = 4e-04 Identities = 133/168 (79%) Strand = Plus / Plus Query: 458 ggaagtgcatgccgcagtatatatggtggatttgtgaaatggtgtatgggaaaaaatgac 517 |||||||| ||||| ||| ||| ||| |||||||| || ||| ||||||||| || || Sbjct: 645 ggaagtgcttgccgtagtttatttgggggatttgtcaagtggaatatgggaaacaaagaa 704 Query: 518 gatggaagtgacagtatggcagtgcagcttgttgacgagtcgcattgggatgatcttgtc 577 ||||||||||||||| | ||||| || || || || || ||| |||||||||||||| Sbjct: 705 gatggaagtgacagtgttgcagttcaactggtagatgataagcactgggatgatcttgtt 764 Query: 578 ataatcatagcagtggtcagctcaaagcagaaggaaaccagtagcacc 625 || || || || ||||| || ||| ||||||||||| || |||||| Sbjct: 765 atcattattgctgtggttagttcacgacagaaggaaacaagcagcacc 812 Score = 52.0 bits (26), Expect = 0.006 Identities = 71/86 (82%) Strand = Plus / Plus Query: 357 tgggagaagttgcatgtccacattgcgtcgtacaacaacttcccaaccgctgccggtttg 416 ||||||||| ||||| | |||||||| || | ||||||||||| || ||||| || || Sbjct: 480 tgggagaagctgcatctgcacattgcttctcataacaacttccctactgctgctggctta 539 Query: 417 gcctcttcggctgctggctttgcttg 442 || ||||| |||||||| |||||||| Sbjct: 540 gcatcttctgctgctggttttgcttg 565
>emb|AL132957.1|ATF24B22 Arabidopsis thaliana DNA chromosome 3, BAC clone F24B22 Length = 100285 Score = 58.0 bits (29), Expect = 9e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 691 cagatagcaaccagtttcatgctgtatgtttggacacgagtcctcccatcttctacatga 750 ||||||| || |||||||||||||| ||| |||| || ||| ||||| |||||||||| Sbjct: 68313 cagatagtaatcagtttcatgctgtttgtctggatacatctccacccatattctacatga 68254 Query: 751 atgatacgtcacacagg 767 |||| || ||||||||| Sbjct: 68253 atgacacttcacacagg 68237 Score = 50.1 bits (25), Expect = 0.022 Identities = 109/137 (79%) Strand = Plus / Minus Query: 458 ggaagtgcatgccgcagtatatatggtggatttgtgaaatggtgtatgggaaaaaatgac 517 |||||||| ||||| ||| ||| |||||||||||| || ||| ||||||| || || Sbjct: 68960 ggaagtgcttgccggagtttatttggtggatttgtcaagtggacaatgggaagcaaagaa 68901 Query: 518 gatggaagtgacagtatggcagtgcagcttgttgacgagtcgcattgggatgatcttgtc 577 |||||||||||||| | ||||| || || | || ||| |||||||||||||||||| Sbjct: 68900 gatggaagtgacagcgttgcagttcaactggcagatgagaagcattgggatgatcttgtt 68841 Query: 578 ataatcatagcagtggt 594 || ||||| || ||||| Sbjct: 68840 atcatcattgctgtggt 68824 Score = 46.1 bits (23), Expect = 0.35 Identities = 26/27 (96%) Strand = Plus / Minus Query: 812 acaggttgcctacacatttgatgctgg 838 ||||||||| ||||||||||||||||| Sbjct: 68025 acaggttgcttacacatttgatgctgg 67999 Score = 42.1 bits (21), Expect = 5.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 393 aacttcccaaccgctgccggtttggcctcttcggctgctggctttgcttgtct 445 |||||||| || ||||| || || || ||||| |||||||| ||||||||||| Sbjct: 69332 aacttccctactgctgctggcttagcatcttcagctgctggatttgcttgtct 69280
>gb|AC005499.3| Arabidopsis thaliana chromosome 2 clone T6A23 map ve018, complete sequence Length = 107541 Score = 54.0 bits (27), Expect = 0.001 Identities = 63/75 (84%) Strand = Plus / Plus Query: 458 ggaagtgcatgccgcagtatatatggtggatttgtgaaatggtgtatgggaaaaaatgac 517 |||||||| ||||| ||| ||| ||| |||||||| || ||| ||||||||| || || Sbjct: 34713 ggaagtgcttgccgtagtttatttgggggatttgtcaagtggaatatgggaaacaaagaa 34772 Query: 518 gatggaagtgacagt 532 ||||||||||||||| Sbjct: 34773 gatggaagtgacagt 34787 Score = 52.0 bits (26), Expect = 0.006 Identities = 71/86 (82%) Strand = Plus / Plus Query: 357 tgggagaagttgcatgtccacattgcgtcgtacaacaacttcccaaccgctgccggtttg 416 ||||||||| ||||| | |||||||| || | ||||||||||| || ||||| || || Sbjct: 33829 tgggagaagctgcatctgcacattgcttctcataacaacttccctactgctgctggctta 33888 Query: 417 gcctcttcggctgctggctttgcttg 442 || ||||| |||||||| |||||||| Sbjct: 33889 gcatcttctgctgctggttttgcttg 33914 Score = 44.1 bits (22), Expect = 1.4 Identities = 55/66 (83%) Strand = Plus / Plus Query: 702 cagtttcatgctgtatgtttggacacgagtcctcccatcttctacatgaatgatacgtca 761 |||||||||||||| ||| |||| || ||| ||||| |||||||||||||| || || Sbjct: 35491 cagtttcatgctgtttgtatggatacatctccacccatattctacatgaatgacacctcc 35550 Query: 762 cacagg 767 |||||| Sbjct: 35551 cacagg 35556
>emb|Y17593.1|ATH17593 Arabidopsis thaliana MVD1 gene, exons 1 to 9 Length = 2837 Score = 54.0 bits (27), Expect = 0.001 Identities = 63/75 (84%) Strand = Plus / Plus Query: 458 ggaagtgcatgccgcagtatatatggtggatttgtgaaatggtgtatgggaaaaaatgac 517 |||||||| ||||| ||| ||| ||| |||||||| || ||| ||||||||| || || Sbjct: 1327 ggaagtgcttgccgtagtttatttgggggatttgtcaagtggaatatgggaaacaaagaa 1386 Query: 518 gatggaagtgacagt 532 ||||||||||||||| Sbjct: 1387 gatggaagtgacagt 1401 Score = 52.0 bits (26), Expect = 0.006 Identities = 71/86 (82%) Strand = Plus / Plus Query: 357 tgggagaagttgcatgtccacattgcgtcgtacaacaacttcccaaccgctgccggtttg 416 ||||||||| ||||| | |||||||| || | ||||||||||| || ||||| || || Sbjct: 475 tgggagaagctgcatctgcacattgcttctcataacaacttccctactgctgctggctta 534 Query: 417 gcctcttcggctgctggctttgcttg 442 || ||||| |||||||| |||||||| Sbjct: 535 gcatcttctgctgctggttttgcttg 560 Score = 44.1 bits (22), Expect = 1.4 Identities = 55/66 (83%) Strand = Plus / Plus Query: 702 cagtttcatgctgtatgtttggacacgagtcctcccatcttctacatgaatgatacgtca 761 |||||||||||||| ||| |||| || ||| ||||| |||||||||||||| || || Sbjct: 2106 cagtttcatgctgtttgtatggatacatctccacccatattctacatgaatgacacctcc 2165 Query: 762 cacagg 767 |||||| Sbjct: 2166 cacagg 2171
>ref|XM_954353.1| Neurospora crassa OR74A hypothetical protein (NCU08139.1) partial mRNA Length = 2499 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 390 aacaacttcccaaccgctgccggtttggcctcttcggctgctggctt 436 ||||||||||| |||||||||||| | ||||| || ||||||||||| Sbjct: 340 aacaacttccctaccgctgccggtctcgcctcgtccgctgctggctt 386 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 731 tcctcccatcttctacatgaa 751 ||||||||||||||||||||| Sbjct: 816 tcctcccatcttctacatgaa 836
>gb|AY757921.1| Ginkgo biloba mevalonate disphosphate decarboxylase mRNA, complete cds Length = 1958 Score = 52.0 bits (26), Expect = 0.006 Identities = 35/38 (92%) Strand = Plus / Plus Query: 455 tctggaagtgcatgccgcagtatatatggtggatttgt 492 |||||||||||||||||||| | |||||||||||||| Sbjct: 790 tctggaagtgcatgccgcagcctctatggtggatttgt 827 Score = 44.1 bits (22), Expect = 1.4 Identities = 31/34 (91%) Strand = Plus / Plus Query: 682 taacttgtgcagatagcaaccagtttcatgctgt 715 ||||||||| ||| |||||||| ||||||||||| Sbjct: 1088 taacttgtgtagacagcaaccaatttcatgctgt 1121
>ref|NM_138656.1| Mus musculus mevalonate (diphospho) decarboxylase (Mvd), mRNA gb|BC008526.1| Mus musculus mevalonate (diphospho) decarboxylase, mRNA (cDNA clone MGC:6640 IMAGE:3495424), complete cds Length = 1767 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 87 aacatcgccgtgatcaagtactgggggaagcgggacgaggcgctcatcct 136 |||||||| || |||||||||||||||||||| || || ||||| ||||| Sbjct: 76 aacatcgcagttatcaagtactgggggaagcgagatgaagcgctgatcct 125 Score = 42.1 bits (21), Expect = 5.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 822 tacacatttgatgctgggcctaacgctgt 850 ||||||||||||||||| || |||||||| Sbjct: 931 tacacatttgatgctggccccaacgctgt 959
>ref|XM_505041.1| Yarrowia lipolytica CLIB122, YALI0F05632g predicted mRNA Length = 1164 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 390 aacaacttcccaaccgctgccggtttggcctcttcggctgctggctttgc 439 ||||||||||| ||||| || ||| | ||||| ||||||||||||||||| Sbjct: 325 aacaacttccccaccgccgctggtctcgcctcatcggctgctggctttgc 374
>dbj|AB212624.1| Streptomyces sp. KO-3988 furaquinocin A biosynthetic gene cluster, complete cds Length = 27448 Score = 52.0 bits (26), Expect = 0.006 Identities = 35/38 (92%) Strand = Plus / Plus Query: 87 aacatcgccgtgatcaagtactgggggaagcgggacga 124 |||||||| |||||||||||||||| ||||||||||| Sbjct: 10745 aacatcgcgctgatcaagtactggggcaagcgggacga 10782
>dbj|AK134803.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330570K24 product:mevalonate (diphospho) decarboxylase, full insert sequence Length = 1746 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 87 aacatcgccgtgatcaagtactgggggaagcgggacgaggcgctcatcct 136 |||||||| || |||||||||||||||||||| || || ||||| ||||| Sbjct: 97 aacatcgcagttatcaagtactgggggaagcgagatgaagcgctgatcct 146 Score = 42.1 bits (21), Expect = 5.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 822 tacacatttgatgctgggcctaacgctgt 850 ||||||||||||||||| || |||||||| Sbjct: 952 tacacatttgatgctggccccaacgctgt 980
>dbj|AK154883.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630110I07 product:mevalonate (diphospho) decarboxylase, full insert sequence Length = 1758 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 87 aacatcgccgtgatcaagtactgggggaagcgggacgaggcgctcatcct 136 |||||||| || |||||||||||||||||||| || || ||||| ||||| Sbjct: 110 aacatcgcagttatcaagtactgggggaagcgagatgaagcgctgatcct 159 Score = 42.1 bits (21), Expect = 5.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 822 tacacatttgatgctgggcctaacgctgt 850 ||||||||||||||||| || |||||||| Sbjct: 965 tacacatttgatgctggccccaacgctgt 993
>dbj|AK153439.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830161I03 product:mevalonate (diphospho) decarboxylase, full insert sequence Length = 1834 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 87 aacatcgccgtgatcaagtactgggggaagcgggacgaggcgctcatcct 136 |||||||| || |||||||||||||||||||| || || ||||| ||||| Sbjct: 83 aacatcgcagttatcaagtactgggggaagcgagatgaagcgctgatcct 132 Score = 42.1 bits (21), Expect = 5.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 822 tacacatttgatgctgggcctaacgctgt 850 ||||||||||||||||| || |||||||| Sbjct: 1041 tacacatttgatgctggccccaacgctgt 1069
>dbj|AK170773.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630119E08 product:mevalonate (diphospho) decarboxylase, full insert sequence Length = 1470 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 87 aacatcgccgtgatcaagtactgggggaagcgggacgaggcgctcatcct 136 |||||||| || |||||||||||||||||||| || || ||||| ||||| Sbjct: 104 aacatcgcagttatcaagtactgggggaagcgagatgaagcgctgatcct 153 Score = 42.1 bits (21), Expect = 5.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 822 tacacatttgatgctgggcctaacgctgt 850 ||||||||||||||||| || |||||||| Sbjct: 959 tacacatttgatgctggccccaacgctgt 987
>dbj|AK170007.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630007P09 product:mevalonate (diphospho) decarboxylase, full insert sequence Length = 1414 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 87 aacatcgccgtgatcaagtactgggggaagcgggacgaggcgctcatcct 136 |||||||| || |||||||||||||||||||| || || ||||| ||||| Sbjct: 45 aacatcgcagttatcaagtactgggggaagcgagatgaagcgctgatcct 94 Score = 42.1 bits (21), Expect = 5.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 822 tacacatttgatgctgggcctaacgctgt 850 ||||||||||||||||| || |||||||| Sbjct: 902 tacacatttgatgctggccccaacgctgt 930
>dbj|AK089354.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730013E20 product:DIPHOSPHOMEVALONATE DECARBOXYLASE homolog [Mus musculus], full insert sequence Length = 1758 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 87 aacatcgccgtgatcaagtactgggggaagcgggacgaggcgctcatcct 136 |||||||| || |||||||||||||||||||| || || ||||| ||||| Sbjct: 110 aacatcgcagttatcaagtactgggggaagcgagatgaagcgctgatcct 159 Score = 42.1 bits (21), Expect = 5.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 822 tacacatttgatgctgggcctaacgctgt 850 ||||||||||||||||| || |||||||| Sbjct: 965 tacacatttgatgctggccccaacgctgt 993
>emb|AJ309922.1|MMU309922 Mus musculus mRNA for diphosphomevalonate decarboxylase (MVD gene) Length = 1713 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 87 aacatcgccgtgatcaagtactgggggaagcgggacgaggcgctcatcct 136 |||||||| || |||||||||||||||||||| || || ||||| ||||| Sbjct: 65 aacatcgcagttatcaagtactgggggaagcgagatgaagcgctgatcct 114 Score = 42.1 bits (21), Expect = 5.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 822 tacacatttgatgctgggcctaacgctgt 850 ||||||||||||||||| || |||||||| Sbjct: 920 tacacatttgatgctggccccaacgctgt 948
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 390 aacaacttcccaaccgctgccggtttggcctcttcggctgctggctttgc 439 ||||||||||| ||||| || ||| | ||||| ||||||||||||||||| Sbjct: 836585 aacaacttccccaccgccgctggtctcgcctcatcggctgctggctttgc 836634
>gb|AC187294.1| Glycine max clone gmw1-105h23, complete sequence Length = 134287 Score = 50.1 bits (25), Expect = 0.022 Identities = 67/81 (82%) Strand = Plus / Plus Query: 687 tgtgcagatagcaaccagtttcatgctgtatgtttggacacgagtcctcccatcttctac 746 ||||| |||||||||||||||||||| || || ||||||| | || || || || ||| Sbjct: 662 tgtgctgatagcaaccagtttcatgcagtctgcctggacacatgcccccctatattttac 721 Query: 747 atgaatgatacgtcacacagg 767 ||||| ||||| ||||||||| Sbjct: 722 atgaacgatacatcacacagg 742
>gb|CP000325.1| Mycobacterium ulcerans Agy99, complete genome Length = 5631606 Score = 48.1 bits (24), Expect = 0.087 Identities = 36/40 (90%) Strand = Plus / Minus Query: 87 aacatcgccgtgatcaagtactgggggaagcgggacgagg 126 |||||||| |||||||||||||||| ||||| ||||||| Sbjct: 3910305 aacatcgcgctgatcaagtactggggcaagcgcgacgagg 3910266
>ref|XM_364905.1| Magnaporthe grisea 70-15 hypothetical protein (MG09750.4) partial mRNA Length = 1158 Score = 48.1 bits (24), Expect = 0.087 Identities = 30/32 (93%) Strand = Plus / Plus Query: 87 aacatcgccgtgatcaagtactgggggaagcg 118 |||||||||||| ||||||||||||| ||||| Sbjct: 46 aacatcgccgtggtcaagtactggggcaagcg 77 Score = 46.1 bits (23), Expect = 0.35 Identities = 41/47 (87%) Strand = Plus / Plus Query: 390 aacaacttcccaaccgctgccggtttggcctcttcggctgctggctt 436 ||||||||||| ||||| |||||| | ||||| |||||||| ||||| Sbjct: 346 aacaacttccccaccgccgccggtctcgcctcatcggctgccggctt 392
>gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 12, complete sequence Length = 906719 Score = 48.1 bits (24), Expect = 0.087 Identities = 30/32 (93%) Strand = Plus / Minus Query: 378 attgcgtcgtacaacaacttcccaaccgctgc 409 ||||| ||||||||||||||||| |||||||| Sbjct: 392203 attgcctcgtacaacaacttccccaccgctgc 392172
>ref|XM_656926.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4414.2), mRNA Length = 1215 Score = 48.1 bits (24), Expect = 0.087 Identities = 24/24 (100%) Strand = Plus / Plus Query: 732 cctcccatcttctacatgaatgat 755 |||||||||||||||||||||||| Sbjct: 829 cctcccatcttctacatgaatgat 852
>gb|AC162920.2| Mus musculus BAC clone RP23-357C16 from chromosome 9, complete sequence Length = 203466 Score = 48.1 bits (24), Expect = 0.087 Identities = 27/28 (96%) Strand = Plus / Minus Query: 992 tacaaatatgtatacatatgataaacat 1019 ||||||||||||||||||| |||||||| Sbjct: 59798 tacaaatatgtatacatataataaacat 59771
>ref|XM_546783.2| PREDICTED: Canis familiaris similar to Diphosphomevalonate decarboxylase (Mevalonate pyrophosphate decarboxylase) (Mevalonate (diphospho)decarboxylase) (LOC489663), mRNA Length = 1822 Score = 48.1 bits (24), Expect = 0.087 Identities = 30/32 (93%) Strand = Plus / Plus Query: 87 aacatcgccgtgatcaagtactgggggaagcg 118 |||||||| || |||||||||||||||||||| Sbjct: 49 aacatcgcggtcatcaagtactgggggaagcg 80
>ref|XM_568247.1| Cryptococcus neoformans var. neoformans JEC21 diphosphomevalonate decarboxylase (CNL04950) partial mRNA Length = 1276 Score = 48.1 bits (24), Expect = 0.087 Identities = 30/32 (93%) Strand = Plus / Plus Query: 378 attgcgtcgtacaacaacttcccaaccgctgc 409 ||||| ||||||||||||||||| |||||||| Sbjct: 331 attgcctcgtacaacaacttccccaccgctgc 362
>ref|XM_799047.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053510913.10) partial mRNA Length = 5316 Score = 48.1 bits (24), Expect = 0.087 Identities = 24/24 (100%) Strand = Plus / Plus Query: 184 ccgccaccaccaccgtcgccgcca 207 |||||||||||||||||||||||| Sbjct: 3421 ccgccaccaccaccgtcgccgcca 3444
>ref|NM_001019452.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC24C9.03), partial mRNA Length = 1182 Score = 48.1 bits (24), Expect = 0.087 Identities = 39/44 (88%) Strand = Plus / Plus Query: 390 aacaacttcccaaccgctgccggtttggcctcttcggctgctgg 433 ||||||||||| || ||||| |||||||| ||||| |||||||| Sbjct: 337 aacaacttccctactgctgctggtttggcatcttcagctgctgg 380
>emb|Z98601.1|SPAC24C9 S.pombe chromosome I cosmid c24C9 Length = 38666 Score = 48.1 bits (24), Expect = 0.087 Identities = 39/44 (88%) Strand = Plus / Plus Query: 390 aacaacttcccaaccgctgccggtttggcctcttcggctgctgg 433 ||||||||||| || ||||| |||||||| ||||| |||||||| Sbjct: 2968 aacaacttccctactgctgctggtttggcatcttcagctgctgg 3011
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 187 ccaccaccaccgtcgccgccagc 209 ||||||||||||||||||||||| Sbjct: 3556830 ccaccaccaccgtcgccgccagc 3556852
>ref|XM_421352.2| PREDICTED: Gallus gallus poly(A) polymerase alpha (PAPOLA), mRNA Length = 3084 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Minus Query: 184 ccgccaccaccaccgtcgccgcc 206 ||||||||||||||||||||||| Sbjct: 243 ccgccaccaccaccgtcgccgcc 221
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 46.1 bits (23), Expect = 0.35 Identities = 32/35 (91%) Strand = Plus / Minus Query: 87 aacatcgccgtgatcaagtactgggggaagcggga 121 ||||||||| || | |||||||||||||||||||| Sbjct: 6273749 aacatcgccctggtgaagtactgggggaagcggga 6273715
>ref|XM_637051.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0218058) mRNA, complete cds Length = 1176 Score = 46.1 bits (23), Expect = 0.35 Identities = 29/31 (93%) Strand = Plus / Plus Query: 818 tgcctacacatttgatgctgggcctaacgct 848 ||||||||||||||||||||| || |||||| Sbjct: 858 tgcctacacatttgatgctggccccaacgct 888
>emb|AJ721094.1| Gallus gallus partial mRNA for hypothetical protein, clone 34p17 Length = 592 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Minus Query: 184 ccgccaccaccaccgtcgccgcc 206 ||||||||||||||||||||||| Sbjct: 231 ccgccaccaccaccgtcgccgcc 209
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 46.1 bits (23), Expect = 0.35 Identities = 35/39 (89%) Strand = Plus / Plus Query: 87 aacatcgccgtgatcaagtactgggggaagcgggacgag 125 |||||||| |||||||||||||||| ||||| |||||| Sbjct: 2382468 aacatcgcgctgatcaagtactggggcaagcgcgacgag 2382506 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 59 gctgacggccacggggcggtcgc 81 ||||||||||||||||||||||| Sbjct: 3060427 gctgacggccacggggcggtcgc 3060449
>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence Length = 210614 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Minus Query: 189 accaccaccgtcgccgccagccc 211 ||||||||||||||||||||||| Sbjct: 136299 accaccaccgtcgccgccagccc 136277
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Minus Query: 187 ccaccaccaccgtcgccgccagc 209 ||||||||||||||||||||||| Sbjct: 1150865 ccaccaccaccgtcgccgccagc 1150843
>dbj|AB037666.1| Streptomyces sp. CL190 genes for mevalonate kinase, diphosphomevalonate decarboxylase, phosphomevalonate kinase, hypothetical protein, 3-hydroxy-3-methylglutaryl CoA reductase, 3-hydroxy-3-methylglutaryl CoA synthase, complete cds Length = 6798 Score = 46.1 bits (23), Expect = 0.35 Identities = 35/39 (89%) Strand = Plus / Plus Query: 87 aacatcgccgtgatcaagtactgggggaagcgggacgag 125 |||||||| |||||||||||||||| ||||| |||||| Sbjct: 1243 aacatcgcgctgatcaagtactggggcaagcgcgacgag 1281
>emb|CR855191.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0157A06, complete sequence Length = 80209 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 179 cctctccgccaccaccaccgtcgccg 204 |||| ||||||||||||||||||||| Sbjct: 2454 cctcgccgccaccaccaccgtcgccg 2429
>emb|CR855184.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0145C12, complete sequence Length = 79624 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 179 cctctccgccaccaccaccgtcgccg 204 |||| ||||||||||||||||||||| Sbjct: 74421 cctcgccgccaccaccaccgtcgccg 74396
>ref|XM_001217449.1| Aspergillus terreus NIH2624 DNA-repair protein rad2 (ATEG_08864) mRNA, complete cds Length = 1209 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 cgacggaggcggaggcgcagtg 55 |||||||||||||||||||||| Sbjct: 488 cgacggaggcggaggcgcagtg 509
>gb|AC160454.31| Glycine max clone gmw1-15k6, complete sequence Length = 148858 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 687 tgtgcagatagcaaccagtttcatgc 712 ||||| |||||||||||||||||||| Sbjct: 114822 tgtgctgatagcaaccagtttcatgc 114797 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Minus Query: 375 cacattgcgtcgtacaacaacttccc 400 |||||||| ||||||||||||||||| Sbjct: 116815 cacattgcttcgtacaacaacttccc 116790
>ref|XM_001080796.1| PREDICTED: Rattus norvegicus suppressor of Ty 6 homolog (S. cerevisiae) (Supt6h), mRNA Length = 6876 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 184 ccgccaccaccaccgtcgccgc 205 |||||||||||||||||||||| Sbjct: 714 ccgccaccaccaccgtcgccgc 693
>ref|XM_239258.4| PREDICTED: Rattus norvegicus suppressor of Ty 6 homolog (S. cerevisiae) (Supt6h), mRNA Length = 6875 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 184 ccgccaccaccaccgtcgccgc 205 |||||||||||||||||||||| Sbjct: 714 ccgccaccaccaccgtcgccgc 693
>gb|AC149361.2| Phakopsora pachyrhizi clone JGIAFNA-41F19, complete sequence Length = 35721 Score = 44.1 bits (22), Expect = 1.4 Identities = 28/30 (93%) Strand = Plus / Plus Query: 818 tgcctacacatttgatgctgggcctaacgc 847 ||||||||| |||||||| ||||||||||| Sbjct: 88 tgcctacacctttgatgccgggcctaacgc 117
>gb|AC114917.2| Mus musculus chromosome 8 clone RP23-84K6, complete sequence Length = 181442 Score = 44.1 bits (22), Expect = 1.4 Identities = 34/38 (89%) Strand = Plus / Minus Query: 813 caggttgcctacacatttgatgctgggcctaacgctgt 850 ||||| || ||||||||||||||||| || |||||||| Sbjct: 35560 caggtggcatacacatttgatgctggccccaacgctgt 35523
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 200 cgccgccagccccgccttcccc 221 |||||||||||||||||||||| Sbjct: 4534501 cgccgccagccccgccttcccc 4534480
>gb|AY104895.1| Zea mays PCO067337 mRNA sequence Length = 973 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 184 ccgccaccaccaccgtcgccgc 205 |||||||||||||||||||||| Sbjct: 339 ccgccaccaccaccgtcgccgc 360
>emb|AL591003.16| Mouse DNA sequence from clone RP23-354I24 on chromosome 13, complete sequence Length = 221647 Score = 44.1 bits (22), Expect = 1.4 Identities = 34/38 (89%) Strand = Plus / Minus Query: 813 caggttgcctacacatttgatgctgggcctaacgctgt 850 ||||| || ||||||||||||||||| || |||||||| Sbjct: 204449 caggtggcatacacatttgatgctggccccaacgctgt 204412
>emb|CT836869.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA202M19, full insert sequence Length = 2503 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 182 ctccgccaccaccaccgtcgccgcc 206 ||||||||||||||||| ||||||| Sbjct: 639 ctccgccaccaccaccgccgccgcc 663
>emb|CT829775.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA060E20, full insert sequence Length = 1082 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 182 ctccgccaccaccaccgtcgccgcc 206 ||||||||||||||||| ||||||| Sbjct: 185 ctccgccaccaccaccgccgccgcc 161
>emb|CT834275.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN061M19, full insert sequence Length = 797 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 cgccaccaccaccgtcgccgc 205 ||||||||||||||||||||| Sbjct: 131 cgccaccaccaccgtcgccgc 151
>emb|CT834274.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA110I05, full insert sequence Length = 1532 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 cgccaccaccaccgtcgccgc 205 ||||||||||||||||||||| Sbjct: 129 cgccaccaccaccgtcgccgc 149
>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome Length = 9965640 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1095 gcccttccaccgcccccggag 1115 ||||||||||||||||||||| Sbjct: 1794406 gcccttccaccgcccccggag 1794426
>ref|XM_001224309.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_05096) mRNA, complete cds Length = 1317 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 346 agaaagaggactgggagaagttgca 370 |||| |||||||||||||||||||| Sbjct: 641 agaaggaggactgggagaagttgca 665
>ref|XM_001221884.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_05790) mRNA, complete cds Length = 2211 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ccaccaccgtcgccgccagcc 210 ||||||||||||||||||||| Sbjct: 122 ccaccaccgtcgccgccagcc 142
>ref|NM_001048967.1| Oryza sativa (japonica cultivar-group) Os01g0221500 (Os01g0221500) mRNA, complete cds Length = 2143 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 182 ctccgccaccaccaccgtcgccgcc 206 ||||||||||||||||| ||||||| Sbjct: 154 ctccgccaccaccaccgccgccgcc 130
>gb|CP000158.1| Hyphomonas neptunium ATCC 15444, complete genome Length = 3705021 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 182 ctccgccaccaccaccgtcgccgcc 206 ||||||||||||||||| ||||||| Sbjct: 2074678 ctccgccaccaccaccgccgccgcc 2074654
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 5.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 187 ccaccaccaccgtcgccgccagccccgcc 215 ||||||||||||| ||||||||| ||||| Sbjct: 3937259 ccaccaccaccgttgccgccagcgccgcc 3937231
>gb|AC145571.3| Mus musculus BAC clone RP24-450H18 from chromosome Y, complete sequence Length = 212589 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 ccaccaccaccgtcgccgcca 207 ||||||||||||||||||||| Sbjct: 124850 ccaccaccaccgtcgccgcca 124870
>gb|AC120887.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0088K21, complete sequence Length = 153239 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 cgccaccaccaccgtcgccgc 205 ||||||||||||||||||||| Sbjct: 67356 cgccaccaccaccgtcgccgc 67376
>gb|AF326573.1| Dengue virus type 4 strain 814669, complete genome Length = 10649 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1254 ttttttaatgaagatcactggtttg 1278 ||||| ||||||||||||||||||| Sbjct: 9033 tttttgaatgaagatcactggtttg 9057
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gtcgccgccagccccgccttc 218 ||||||||||||||||||||| Sbjct: 1276396 gtcgccgccagccccgccttc 1276376
>gb|AC124598.5| Mus musculus BAC clone RP23-22P3 from 13, complete sequence Length = 220624 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 ccaccaccaccgtcgccgcca 207 ||||||||||||||||||||| Sbjct: 78990 ccaccaccaccgtcgccgcca 79010
>gb|AY243469.1| Chimeric Dengue virus vector p4(Delta30)-D2-CME, complete sequence Length = 15237 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1254 ttttttaatgaagatcactggtttg 1278 ||||| ||||||||||||||||||| Sbjct: 9031 tttttgaatgaagatcactggtttg 9055
>gb|AY243468.1| Chimeric Dengue virus vector p4-D2-CME, complete sequence Length = 15268 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1254 ttttttaatgaagatcactggtttg 1278 ||||| ||||||||||||||||||| Sbjct: 9031 tttttgaatgaagatcactggtttg 9055
>gb|AY243467.1| Chimeric Dengue virus vector p4(Delta30)-D2-ME, complete sequence Length = 15239 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1254 ttttttaatgaagatcactggtttg 1278 ||||| ||||||||||||||||||| Sbjct: 9033 tttttgaatgaagatcactggtttg 9057
>gb|AY243466.1| Chimeric Dengue virus vector p4-D2-ME, complete sequence Length = 15270 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1254 ttttttaatgaagatcactggtttg 1278 ||||| ||||||||||||||||||| Sbjct: 9033 tttttgaatgaagatcactggtttg 9057
>gb|AY376438.1| Dengue virus vector p4(Delta30), complete sequence Length = 15239 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1254 ttttttaatgaagatcactggtttg 1278 ||||| ||||||||||||||||||| Sbjct: 9033 tttttgaatgaagatcactggtttg 9057
>gb|AC101718.6| Mus musculus chromosome 18, clone RP23-292N8, complete sequence Length = 175366 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 604 gcagaaggaaaccagtagcac 624 ||||||||||||||||||||| Sbjct: 20900 gcagaaggaaaccagtagcac 20880
>dbj|AP006336.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT07E09, TM0293, complete sequence Length = 113091 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 ccaccaccaccgtcgccgcca 207 ||||||||||||||||||||| Sbjct: 98588 ccaccaccaccgtcgccgcca 98568
>dbj|AP007265.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT11L01, TM1658, complete sequence Length = 99089 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 ccaccaccaccgtcgccgcca 207 ||||||||||||||||||||| Sbjct: 47197 ccaccaccaccgtcgccgcca 47217
>gb|AC096781.6| Oryza sativa chromosome 10 BAC OSJNBa0013H08 genomic sequence, complete sequence Length = 58293 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 ccaccaccaccgtcgccgcca 207 ||||||||||||||||||||| Sbjct: 57997 ccaccaccaccgtcgccgcca 57977
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 191 caccaccgtcgccgccagccccgcc 215 ||||||||||||| ||||||||||| Sbjct: 3592828 caccaccgtcgccaccagccccgcc 3592804
>gb|AC156546.7| Mus musculus chromosome 18, clone RP23-131O22, complete sequence Length = 209678 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 604 gcagaaggaaaccagtagcac 624 ||||||||||||||||||||| Sbjct: 151510 gcagaaggaaaccagtagcac 151490
>ref|NM_001033192.1| Mus musculus expressed sequence C78339 (C78339), mRNA dbj|AK141282.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430019C18 product:similar to Autosomal highly conserved protein (Similar to family with sequence similarity 8, member A1) [Homo sapiens], full insert sequence Length = 1383 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 ccaccaccaccgtcgccgcca 207 ||||||||||||||||||||| Sbjct: 160 ccaccaccaccgtcgccgcca 180
>gb|AC063947.30| Homo sapiens 12 BAC RP11-350G24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 196877 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 906 tgctttcctccacaagaaaatgatt 930 ||||||||||||||| ||||||||| Sbjct: 37023 tgctttcctccacaataaaatgatt 37047
>dbj|AK171039.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630220J19 product:similar to Autosomal highly conserved protein (Similar to family with sequence similarity 8, member A1) [Homo sapiens], full insert sequence Length = 1284 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 ccaccaccaccgtcgccgcca 207 ||||||||||||||||||||| Sbjct: 192 ccaccaccaccgtcgccgcca 212
>gb|AC123784.2| Homo sapiens chromosome 15, clone RP11-354M13, complete sequence Length = 175493 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 431 tggctttgcttgtcttggcag 451 ||||||||||||||||||||| Sbjct: 102295 tggctttgcttgtcttggcag 102315
>gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A08 genomic sequence, complete sequence Length = 117157 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 ccaccaccaccgtcgccgcca 207 ||||||||||||||||||||| Sbjct: 24096 ccaccaccaccgtcgccgcca 24076
>ref|XM_805973.1| Trypanosoma cruzi strain CL Brener metalloprotease-like protein (Tc00.1047053510579.20) partial mRNA Length = 1101 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 gaggcggaggcgcagtgggtg 59 ||||||||||||||||||||| Sbjct: 481 gaggcggaggcgcagtgggtg 501
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 cgccaccaccaccgtcgccgc 205 ||||||||||||||||||||| Sbjct: 22807639 cgccaccaccaccgtcgccgc 22807659
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 ccaccaccaccgtcgccgcca 207 ||||||||||||||||||||| Sbjct: 16333987 ccaccaccaccgtcgccgcca 16334007
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 182 ctccgccaccaccaccgtcgccgcc 206 ||||||||||||||||| ||||||| Sbjct: 6652301 ctccgccaccaccaccgccgccgcc 6652277 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 gccaccaccaccgtcgccgcc 206 ||||||||||||||||||||| Sbjct: 24853483 gccaccaccaccgtcgccgcc 24853503
>gb|AF326827.1| Dengue virus type 4 recombinant clone rDEN4del30, complete sequence Length = 10618 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1254 ttttttaatgaagatcactggtttg 1278 ||||| ||||||||||||||||||| Sbjct: 9033 tttttgaatgaagatcactggtttg 9057
>gb|AF326826.1| Dengue virus type 4 recombinant clone 2Adel30, complete sequence Length = 10618 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1254 ttttttaatgaagatcactggtttg 1278 ||||| ||||||||||||||||||| Sbjct: 9033 tttttgaatgaagatcactggtttg 9057
>gb|AF326825.1| Dengue virus type 4 recombinant clone rDEN4, complete sequence Length = 10649 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1254 ttttttaatgaagatcactggtttg 1278 ||||| ||||||||||||||||||| Sbjct: 9033 tttttgaatgaagatcactggtttg 9057
>gb|AF375822.1|AF375822 Dengue virus type 4 recombinant clone 2A, complete genome Length = 10649 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1254 ttttttaatgaagatcactggtttg 1278 ||||| ||||||||||||||||||| Sbjct: 9033 tttttgaatgaagatcactggtttg 9057
>emb|BX897677.1| Neurospora crassa DNA linkage group VI BAC clone B15B10 Length = 77986 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 183 tccgccaccaccaccgtcgccgcca 207 |||||||||||||||| |||||||| Sbjct: 50011 tccgccaccaccaccgccgccgcca 50035
>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13 Length = 349606 Score = 42.1 bits (21), Expect = 5.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 187 ccaccaccaccgtcgccgccagccccgcc 215 ||||||||||||| ||||||||| ||||| Sbjct: 126484 ccaccaccaccgttgccgccagcgccgcc 126456
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14 Length = 316050 Score = 42.1 bits (21), Expect = 5.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 187 ccaccaccaccgtcgccgccagccccgcc 215 ||||||||||||| ||||||||| ||||| Sbjct: 137349 ccaccaccaccgttgccgccagcgccgcc 137321
>gb|AC158661.7| Mus musculus 6 BAC RP23-31E23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 181763 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 199 tcgccgccagccccgccttcccctc 223 ||||||| ||||||||||||||||| Sbjct: 122578 tcgccgcgagccccgccttcccctc 122602
>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483F08 Length = 148985 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 182 ctccgccaccaccaccgtcgccgcc 206 ||||||||||||||||| ||||||| Sbjct: 132472 ctccgccaccaccaccgccgccgcc 132448
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 182 ctccgccaccaccaccgtcgccgcc 206 ||||||||||||||||| ||||||| Sbjct: 4453 ctccgccaccaccaccgccgccgcc 4429
>gb|AC015599.5|AC015599 Homo sapiens chromosome , clone RP11-45B19, complete sequence Length = 162607 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 990 tctacaaatatgtatacatat 1010 ||||||||||||||||||||| Sbjct: 138634 tctacaaatatgtatacatat 138654
>emb|AJ512644.1|OCU512644 Oryctolagus cuniculus mRNA for alpha 2A adrenoceptor (adra2A gene) Length = 1356 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 182 ctccgccaccaccaccgtcgccgcc 206 ||||||||||||||||| ||||||| Sbjct: 707 ctccgccaccaccaccgccgccgcc 731
>dbj|AP002819.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0501G01 Length = 154561 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 gccaccaccaccgtcgccgcc 206 ||||||||||||||||||||| Sbjct: 76603 gccaccaccaccgtcgccgcc 76623
>gb|AC006508.2|AC006508 Mus musculus Yp BAC GSMB-187H15 (Genome Systems Mouse BAC Library) complete sequence Length = 185286 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 ccaccaccaccgtcgccgcca 207 ||||||||||||||||||||| Sbjct: 123014 ccaccaccaccgtcgccgcca 122994
>dbj|AK120144.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013028I24, full insert sequence Length = 2379 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 cgccaccaccaccgtcgccgc 205 ||||||||||||||||||||| Sbjct: 127 cgccaccaccaccgtcgccgc 147
>ref|XM_955129.1| Neurospora crassa OR74A hypothetical protein (NCU04773.1) partial mRNA Length = 1698 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 183 tccgccaccaccaccgtcgccgcca 207 |||||||||||||||| |||||||| Sbjct: 1605 tccgccaccaccaccgccgccgcca 1581
>gb|AF248951.1|AF248951 Prevotella sp. RS2 anthranilate phosphoribosyl transferase AptA (aptA) gene, partial cds; iron-sulfur oxidoreductase MdsB (mdsB), mucin-desulfating sulfatase MdsA (mdsA), MdsC protein (mdsC), and MdsD protein (mdsD) genes, complete cds; and ZbpA protein (zbpA) gene, partial cds Length = 9708 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 caacggaaaggagattgcgtt 259 ||||||||||||||||||||| Sbjct: 6967 caacggaaaggagattgcgtt 6987
>dbj|AK063996.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-E12, full insert sequence Length = 2143 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 182 ctccgccaccaccaccgtcgccgcc 206 ||||||||||||||||| ||||||| Sbjct: 154 ctccgccaccaccaccgccgccgcc 130
>dbj|AP006375.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT32M04, TM0219, complete sequence Length = 72880 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 ccaccaccaccgtcgccgcca 207 ||||||||||||||||||||| Sbjct: 65778 ccaccaccaccgtcgccgcca 65798
>dbj|AP006118.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT47H13, TM0201, complete sequence Length = 79882 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 ccaccaccaccgtcgccgcca 207 ||||||||||||||||||||| Sbjct: 37055 ccaccaccaccgtcgccgcca 37075
>dbj|AP006093.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT47G03, TM0166, complete sequence Length = 97864 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 ccaccaccaccgtcgccgcca 207 ||||||||||||||||||||| Sbjct: 21970 ccaccaccaccgtcgccgcca 21990
>dbj|AP004943.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT38E13, TM0115, complete sequence Length = 95582 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 ccaccaccaccgtcgccgcca 207 ||||||||||||||||||||| Sbjct: 56670 ccaccaccaccgtcgccgcca 56690
>gb|AY947539.1| Dengue virus type 4 strain H241, complete genome Length = 10643 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1254 ttttttaatgaagatcactggtttg 1278 ||||| ||||||||||||||||||| Sbjct: 9025 tttttgaatgaagatcactggtttg 9049
>gb|M14931.2|DENSTRA Dengue virus type 4 polyprotein precursor, gene, complete cds Length = 10648 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1254 ttttttaatgaagatcactggtttg 1278 ||||| ||||||||||||||||||| Sbjct: 9033 tttttgaatgaagatcactggtttg 9057
>gb|AC155101.19| Medicago truncatula clone mth2-139j13, complete sequence Length = 124152 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 ccaccaccaccgtcgccgcca 207 ||||||||||||||||||||| Sbjct: 86688 ccaccaccaccgtcgccgcca 86668
>gb|AY776330.1| Dengue virus type 4 strain Taiwan-2K0713 polyprotein gene, complete cds Length = 10353 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1254 ttttttaatgaagatcactggtttg 1278 ||||| ||||||||||||||||||| Sbjct: 9010 tttttgaatgaagatcactggtttg 9034
>emb|AL355838.3|CNS05TCT Human chromosome 14 DNA sequence BAC R-705B14 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 167875 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1354 ttctctagtgtggtagagttg 1374 ||||||||||||||||||||| Sbjct: 92811 ttctctagtgtggtagagttg 92791
>gb|L33180.1|NPHT3COMP Bombyx mori nuclear polyhedrosis virus isolate T3, complete genome Length = 128413 Score = 42.1 bits (21), Expect = 5.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 184 ccgccaccaccaccgtcgccgccagccccgcct 216 ||||| |||||||| ||||||||||||||||| Sbjct: 1556 ccgccgccaccacctccgccgccagccccgcct 1524
>gb|AC006056.2|AC006056 Mus musculus Yp BAC GSMB-368G7 (Genome Systems Mouse BAC Library) complete sequence Length = 52614 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 ccaccaccaccgtcgccgcca 207 ||||||||||||||||||||| Sbjct: 15781 ccaccaccaccgtcgccgcca 15801
>emb|AL954655.9| Zebrafish DNA sequence from clone CH211-226H7, complete sequence Length = 207351 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1247 agtgtaattttttaatgaaga 1267 ||||||||||||||||||||| Sbjct: 140188 agtgtaattttttaatgaaga 140168
>gb|AC148319.2| Mus musculus BAC clone RP24-540G19 from Y, complete sequence Length = 159680 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 187 ccaccaccaccgtcgccgcca 207 ||||||||||||||||||||| Sbjct: 152512 ccaccaccaccgtcgccgcca 152532
>gb|AC002426.1|AC002426 Human Chromosome 15q26 pac pDJ422e7, complete sequence Length = 117852 Score = 42.1 bits (21), Expect = 5.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 431 tggctttgcttgtcttggcag 451 ||||||||||||||||||||| Sbjct: 34375 tggctttgcttgtcttggcag 34395
>gb|AY618993.1| Dengue virus type 4 strain ThD4_0734_00, complete genome Length = 10653 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1254 ttttttaatgaagatcactggtttg 1278 ||||| ||||||||||||||||||| Sbjct: 9034 tttttgaatgaagatcactggtttg 9058
>gb|AY618992.1| Dengue virus type 4 strain ThD4_0485_01, complete genome Length = 10649 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1254 ttttttaatgaagatcactggtttg 1278 ||||| ||||||||||||||||||| Sbjct: 9033 tttttgaatgaagatcactggtttg 9057
>gb|AY858036.1| Dengue virus type 2 strain TB16i, complete genome Length = 10723 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1253 attttttaatgaagatcactggttt 1277 |||||| |||||||||||||||||| Sbjct: 9039 atttttgaatgaagatcactggttt 9063
>gb|AY656168.1| Chimeric dengue virus vector p4(delta30)-D3L-ME, complete sequence Length = 15256 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1254 ttttttaatgaagatcactggtttg 1278 ||||| ||||||||||||||||||| Sbjct: 9050 tttttgaatgaagatcactggtttg 9074
>gb|AY656167.1| Chimeric dengue virus vector p4-D3L-ME, complete sequence Length = 15287 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1254 ttttttaatgaagatcactggtttg 1278 ||||| ||||||||||||||||||| Sbjct: 9050 tttttgaatgaagatcactggtttg 9074
>gb|AY648301.1| Dengue virus type 4 vector p4, complete sequence Length = 15270 Score = 42.1 bits (21), Expect = 5.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1254 ttttttaatgaagatcactggtttg 1278 ||||| ||||||||||||||||||| Sbjct: 9033 tttttgaatgaagatcactggtttg 9057 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 250,424,496 Number of extensions: 14207381 Number of successful extensions: 301615 Number of sequences better than 10.0: 142 Number of HSP's gapped: 301606 Number of HSP's successfully gapped: 225 Length of query: 1418 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1395 Effective length of database: 18,503,978,556 Effective search space: 25813050085620 Effective search space used: 25813050085620 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)