Clone Name | FLbaf98i15 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | Os10g0489900:Os10g0489900 | 524 | e-148 | 2 | AK119406:Os04g0185100 | 163 | 5e-40 | 3 | AK066212:Os05g0395300 | 33 | 0.66 | 4 | Os12g0542200:Os12g0542200 | 32 | 1.9 | 5 | AF368282:Os03g0366200 | 30 | 5.5 | 6 | Os02g0745300:Os02g0745300 | 30 | 7.2 | 7 | Os02g0117200:Os02g0117200 | 30 | 7.2 | 8 | AK110387: | 30 | 9.5 | 9 | AK063722:Os03g0737400 | 30 | 9.5 |
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>Os10g0489900:Os10g0489900 | Length = 594 Score = 524 bits (1349), Expect = e-148 Identities = 302/523 (57%), Positives = 352/523 (67%), Gaps = 29/523 (5%) Frame = +3 Query: 408 LLSERYKDRLAEKLLGXXXXXXXXXXXXIAL--PDGSQ------------SPA--SXXXX 539 LL+ERYKDR A +LLG + PDGS SP S Sbjct: 81 LLAERYKDRFAAQLLGDEDEDETDDEDDSSSTSPDGSSPSVSESIDISGTSPKDRSNDLL 140 Query: 540 XXXXXXXXXXXRMESSIRLLCLRKKMPTFTNIATQVEVLTKRKFLYSHLAQMKHLFPEAI 719 RM SSIRLL LRKKM TF NIATQVE+LTKR+FLY+HLAQMKHLFPEAI Sbjct: 141 EKHNNLLNLFNRMMSSIRLLHLRKKMTTFKNIATQVEILTKREFLYTHLAQMKHLFPEAI 200 Query: 720 QINRILLHDQKSLCMYADMEITLLNDVVECNNPQESPAMAICEAFRSKLLCFLGSHHKGI 899 QI +ILLHD+KSLCMYADMEIT+L D VE ++P +S +MAICEAF SKLL FL +HHK I Sbjct: 201 QIKKILLHDEKSLCMYADMEITILMDTVESSSPDQSLSMAICEAFHSKLLSFLDAHHKDI 260 Query: 900 DVPEATLPEPFNSREELYLDALHNDNSVDGVLEFSSENGFSNASHFPQSFQKLMSQKSIA 1079 D+PEA LPEPFNSR++L+L A + +S + +L+ S+ N NASHFP SFQKLMSQK IA Sbjct: 261 DIPEAMLPEPFNSRDKLHLKAPLDGHSAEPLLQSSNRNELLNASHFPCSFQKLMSQKIIA 320 Query: 1080 KVTEKTRLLSDPVEVTSLGVDDTGGPDRSSNK---HVSVPLNTNISDTPNRHSISFCENS 1250 T++T+LLSDP E++ L DDT GP RSSNK H S+P T+IS TPNRH IS C+ S Sbjct: 321 DGTDRTKLLSDPAELSMLSADDTEGPKRSSNKQDQHASIPFKTDISSTPNRHLISSCQGS 380 Query: 1251 TPKQG-ISNSPSMAETPAMQTPKRPLPTPVAKHETSSRHGSEXXXXXXXXXXLIMFSPSK 1427 TPKQG + +SP MAETPAMQTP+RPLPT + K ET+S SE L MFSPSK Sbjct: 381 TPKQGTLLHSPLMAETPAMQTPRRPLPTQIEKLETTSGQTSEARSASSARRSLKMFSPSK 440 Query: 1428 FNESPSATDADTSKLDKDGVSSITEPEVTTGKCLFPEETVTFTDLLLEND--------NK 1583 E S D DG E EVT GKCLFP+ET FT+ L EN+ +K Sbjct: 441 IQECSS---------DHDGAILTLEHEVTAGKCLFPDETHNFTNSLEENNPAICFADVDK 491 Query: 1584 TVQVSSTNSQEKLDSLRVTFDIVCGISGSTKNSLITKQELFHNILANNLXXXXXXXXXXQ 1763 T +V SQEK+ SL++TFDIVC IS STKNSLITKQELFHNILANNL Q Sbjct: 492 TKEVDPAESQEKIASLQLTFDIVCDISRSTKNSLITKQELFHNILANNLEIEETGEIEEQ 551 Query: 1764 LHILEDLSPDWISKE-LRGGEILYSFKQISDQKSVRERLTEVI 1889 LHILEDLSPDWISK+ + GG+ILYS K+I+DQKSVR RL EVI Sbjct: 552 LHILEDLSPDWISKKVIPGGDILYSIKEIADQKSVRARLVEVI 594
>AK119406:Os04g0185100 | Length = 588 Score = 163 bits (412), Expect = 5e-40 Identities = 139/478 (29%), Positives = 219/478 (45%), Gaps = 45/478 (9%) Frame = +3 Query: 579 ESSIRLLCLRKKMPTFTNIATQVEVLTKRKFLYSHLAQMKHLFPEAIQINRILLHDQKSL 758 ESS RLL ++ +F NI ++ L++R+F YSHLAQ+K++ PE I IN+ILL D+ + Sbjct: 152 ESSTRLLRMKGSKASFPNICASIQHLSERRFTYSHLAQLKYIMPEVIVINKILLRDETTC 211 Query: 759 CMYADMEITLLNDVVE--CNNPQESPAMAICEAFRSKLLCFLGSHHKGIDVPEATLPEPF 932 CM D+++ LL D VE E+ A+ FR +L+ + H +G D+PE LP PF Sbjct: 212 CMKPDLQVNLLVDAVEGVAKQKGETGYSALRRIFRQRLVDYFRDHPEGHDIPEHELPHPF 271 Query: 933 NSREELYLDALHND--NSVDGV-LEFSSENGFSNASHFPQSFQKLMSQKSIAKVTEKT-- 1097 A+ D +V + L +++ SH P SF+++ SQ+S A T Sbjct: 272 GPTRSSAPQAIQEDIPKTVSALPLSSATDRQPVAMSHMPNSFKRMFSQRSAAAAAATTST 331 Query: 1098 ------------------RLLSDPVEVTSLGVDDTGGPDRSSNKHVSVPLNTNISD-TPN 1220 LL PV + V ++ G ++S V + +S+ TP Sbjct: 332 TSPLSKVEPSITSPLSRKSLLGSPVSGSVSLVRESEGQEKSVE---GVAFQSGVSEGTPA 388 Query: 1221 RHSISFCENSTPKQGISNSPSMAETPAMQTPKRPL--------PTPVAKHETSSRHGSEX 1376 + + STP + MAETP +QTPKRP+ P +AK ++ Sbjct: 389 KFA------STPVR------LMAETPVLQTPKRPVSGTGYDTPPLKMAKRSARTK----- 431 Query: 1377 XXXXXXXXXLIMFSPSK----FNESPSATDADTSKLDKDGVSSITEPEVTTGKCLFPEET 1544 + +P+K +E +T A T D + +S + + + + K Sbjct: 432 ----------LFMTPTKDASSMDEKKQSTSASTLDGDDELLSFLPKSLLQSVK------- 474 Query: 1545 VTFTDLLLENDNKTVQVSSTN-----SQEKL-DSLRVTFDIVCGISGSTKNSLITKQELF 1706 + +N+ + T +EKL SL FDI+ I S + +++TKQEL Sbjct: 475 --------DKENRALVEKQTGFADHIKREKLIASLPSIFDIIFLIYQSRQRTVMTKQELI 526 Query: 1707 HNILANNLXXXXXXXXXXQLHILEDLSPDWIS-KELRGGEILYSFKQISDQKSVRERL 1877 H I+A+N QL +LE++ PDWIS K R G++L Q +R+RL Sbjct: 527 HKIIASNPKIVDRGEVEDQLKLLEEIIPDWISEKTARTGDVLCCVDTAMSQAEIRQRL 584
>AK066212:Os05g0395300 | Length = 500 Score = 33.5 bits (75), Expect = 0.66 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 8/90 (8%) Frame = +3 Query: 141 RTSPDPRPHGLPDLGSPCLELRMVEGKSVQVDLEKGLNQMPNDSNPTS------PATIQK 302 +T P+ G P L +P L +S+ VD+EK ++ N + P S P + + Sbjct: 334 KTEPNREVSGAPQLTAPLLSNNEERVESLVVDIEKPQSRQVNGNKPCSMQQNEMPYAMSR 393 Query: 303 MKPDMEDSGSKIESPTLEKL--ESGREEIV 386 D++D G I TLE + E +EEIV Sbjct: 394 SSEDIDD-GEVIGIITLEDVFEELLQEEIV 422
>Os12g0542200:Os12g0542200 | Length = 760 Score = 32.0 bits (71), Expect = 1.9 Identities = 38/150 (25%), Positives = 58/150 (38%), Gaps = 11/150 (7%) Frame = +3 Query: 1161 RSSNKHVSVPLNTNISDTPNRHSISFCENSTPKQGISNSPSMAETPAMQTPKRPLPTPVA 1340 ++S+ + PL+T+ S T + S S +ST K P+ A T + TP +PT Sbjct: 587 KTSSTPSTSPLSTSTSKTSSTPSTSPLSSSTIK-----IPTTARTGELSTPTDKIPTTTR 641 Query: 1341 KHETSSRHGSEXXXXXXXXXXLIMFSPSKFNESPSA-----------TDADTSKLDKDGV 1487 + S+ + + + SK + + A T TSKL Sbjct: 642 AGDLST---ATSKIPTAPGTSELSTTTSKISSTSCAGQFSTSTYGIPTTTCTSKL----T 694 Query: 1488 SSITEPEVTTGKCLFPEETVTFTDLLLEND 1577 +S + TG C F T TFT ND Sbjct: 695 ASSCKVSSPTGACKFSTSTSTFTPTSFSND 724
>AF368282:Os03g0366200 | Length = 597 Score = 30.4 bits (67), Expect = 5.5 Identities = 24/61 (39%), Positives = 28/61 (45%), Gaps = 8/61 (13%) Frame = +3 Query: 1212 TPNRHSISF-CENSTPKQGISNSP---SMAETPAMQTPKRPLPTP-VAKH---ETSSRHG 1367 TP +H F + P SP S+A TPA KRP P P AKH + RHG Sbjct: 52 TPKQHKFPFYLPSPLPASSYKGSPANSSVASTPARGGFKRPFPPPSPAKHIRALLARRHG 111 Query: 1368 S 1370 S Sbjct: 112 S 112
>Os02g0745300:Os02g0745300 | Length = 383 Score = 30.0 bits (66), Expect = 7.2 Identities = 22/83 (26%), Positives = 37/83 (44%) Frame = +3 Query: 1104 LSDPVEVTSLGVDDTGGPDRSSNKHVSVPLNTNISDTPNRHSISFCENSTPKQGISNSPS 1283 LS E + V T + ++ + S + IS T S+ ++ P N S Sbjct: 190 LSSTNEAYTAPVSQTTQRSQHTSDNTSSVMTDAISSTIQFTGSSYLPSTVPS--CHNPLS 247 Query: 1284 MAETPAMQTPKRPLPTPVAKHET 1352 M ++ + PLP+PVA+H+T Sbjct: 248 MIDSNSRPDASVPLPSPVAEHQT 270
>Os02g0117200:Os02g0117200 | Length = 218 Score = 30.0 bits (66), Expect = 7.2 Identities = 14/42 (33%), Positives = 25/42 (59%) Frame = +3 Query: 252 NQMPNDSNPTSPATIQKMKPDMEDSGSKIESPTLEKLESGRE 377 ++ P S PTSP + ++ ++ K++ TL+KLESG + Sbjct: 97 SRSPRSSTPTSPVSELRVVELLDGLCDKMQDYTLQKLESGEK 138
>AK110387: | Length = 923 Score = 29.6 bits (65), Expect = 9.5 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 4/78 (5%) Frame = +3 Query: 744 DQKSLCMYAD----MEITLLNDVVECNNPQESPAMAICEAFRSKLLCFLGSHHKGIDVPE 911 +Q+ +YA ++ + VVE N QE+PA + E +L ++ G+D E Sbjct: 821 EQREALLYARTQDFIQRSYTGTVVEQNPVQEAPAEEMAELNADELAAYMADIADGLD--E 878 Query: 912 ATLPEPFNSREELYLDAL 965 A L + +R+++ D L Sbjct: 879 APLDDGIRARDDVAADEL 896
>AK063722:Os03g0737400 | Length = 173 Score = 29.6 bits (65), Expect = 9.5 Identities = 25/102 (24%), Positives = 46/102 (45%) Frame = +3 Query: 771 DMEITLLNDVVECNNPQESPAMAICEAFRSKLLCFLGSHHKGIDVPEATLPEPFNSREEL 950 D++ TL EC + +ESP++ +R KGID+ A+ P ++ Sbjct: 27 DLDYTLWPFYCECRSKRESPSL-----YRHAKGIMFALREKGIDMAIAS-RSPTPDIAKV 80 Query: 951 YLDALHNDNSVDGVLEFSSENGFSNASHFPQSFQKLMSQKSI 1076 ++D L + F ++ FS+ +H + FQK+ + I Sbjct: 81 FIDKLEIKSM------FVAQEIFSSWTHKTEHFQKIQRKTGI 116 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 61,398,436 Number of extensions: 1340174 Number of successful extensions: 4015 Number of sequences better than 10.0: 9 Number of HSP's gapped: 3997 Number of HSP's successfully gapped: 9 Length of query: 754 Length of database: 15,399,855 Length adjustment: 108 Effective length of query: 646 Effective length of database: 11,075,427 Effective search space: 7154725842 Effective search space used: 7154725842 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)