ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf96e17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001064884.1| Oryza sativa (japonica cultivar-group) Os06g0676000 (Os06g0676000) mRNA, complete cds Length = 2196 Score = 1612 bits (813), Expect = 0.0 Identities = 1317/1485 (88%) Strand = Plus / Plus Query: 167 gcaatgctcgtcgcagccgcagtttatgactagcgtcgggcagaacaatacctcgaatgg 226 |||| ||||||||||||| |||||||| ||||||||| || ||||||| |||||||| Sbjct: 282 gcaacgctcgtcgcagccacagtttatctctagcgtcgagcggaacaatcaatcgaatgg 341 Query: 227 accggggacccctcttattgacagcatagatgttgatcagattgttatccctgagaaaaa 286 || || || |||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 342 tcctggcactcctcttattgacagcatagatgttgatcagattgttattccagagaaaaa 401 Query: 287 tagctggaagaacttattttcatacatagggcccggttttctcgtctctatcgcctatat 346 ||| ||||||||| |||||||||||||||||||||| ||||| |||||||| || ||||| Sbjct: 402 tagttggaagaacctattttcatacatagggcccggatttcttgtctctattgcgtatat 461 Query: 347 cgatcctggcaattttgagacggacctacaggctggagcacagtacaaatacgagcttct 406 |||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 462 tgatcctggaaattttgagacagacctacaggctggagcacagtacaaatatgagcttct 521 Query: 407 ttggatcatacttattgcatcatgtgctgcacttgtaattcaatcgcttgcagccagcct 466 |||||||||||||||||| ||||||||||| ||| |||||||||| |||||||| || || Sbjct: 522 ttggatcatacttattgcgtcatgtgctgctcttataattcaatcacttgcagctaggct 581 Query: 467 aggtgttgtgactgggaagcatcttgctgagcactgcagggctgaatatcccaaggtcac 526 ||| || |||||||||||||| || || ||||| ||||| ||||||||||| |||| || Sbjct: 582 aggagtcgtgactgggaagcacctggccgagcattgcagagctgaatatccaaaggctac 641 Query: 527 aaatttcatcttatggattcttgcagaactggctgtagttgcgtgcgacattcctgaagt 586 ||||||||| |||||||||||||| ||||| ||||||||||| ||||||||||||||||| Sbjct: 642 aaatttcatattatggattcttgcggaactagctgtagttgcatgcgacattcctgaagt 701 Query: 587 aattggaactgcttttgctttgaacatgctcttcaaaattccaatatggtgcggtgttct 646 ||||||||||||||||||||||||||||||||| ||||| || | ||||| |||||||| Sbjct: 702 aattggaactgcttttgctttgaacatgctctttaaaatccctgtgtggtgtggtgttct 761 Query: 647 cataactgggctcagcactctgatgctcctgttcctgcaacagtacgggatccgtaaact 706 |||||||| ||||||||||||||||| ||||| || ||||| || ||| |||||||||| Sbjct: 762 gataactggactcagcactctgatgctactgttactacaacaatatggggtccgtaaact 821 Query: 707 ggaatttctgatagcatttctggtattcttgatagcaacttgcttcttagttgaacttgg 766 ||||||||||||||| ||||||| | || ||||||||||| ||||||||||| ||||| Sbjct: 822 ggaatttctgatagctattctggtgtcattaatagcaacttgtttcttagttgagcttgg 881 Query: 767 gtattctaaaccaaactcttcagaagttgtgcgaggcctttttgttcctgaaattaaagg 826 ||||||||||||||| ||||||||||||||| | |||||||||||||||||| ||||||| Sbjct: 882 gtattctaaaccaaattcttcagaagttgtgaggggcctttttgttcctgaacttaaagg 941 Query: 827 agatggagctacaggtcttgctatctcactacttggtgctatggtgatgccgcacaatct 886 ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 942 gaatggagccacaggtcttgctatctcactacttggtgctatggtgatgccgcataatct 1001 Query: 887 ttttcttcactcagcattggtactatcaagaaaagtaccacgatcagtgcatgggatcaa 946 |||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 1002 ttttctccactcagcattggtactatcaagaaaagtgccacggtcagttcatgggatcaa 1061 Query: 947 agaggcctgtagattctatatgattgaaagtgcatttgccctcacagtagcctttctgat 1006 |||||| |||||||||||||||||||||||||||||||||||||| |||| || || || Sbjct: 1062 agaggcatgtagattctatatgattgaaagtgcatttgccctcacgatagcgttcctcat 1121 Query: 1007 caacatatctatcatatctgtcagtggtgcagtttgcagtgcagataatttgaaccctga 1066 |||||||||||||||||||| |||||||| || ||| | |||||||||||| ||||| Sbjct: 1122 taacatatctatcatatctgttagtggtgctgtctgcgggtcagataatttgagtcctga 1181 Query: 1067 agaccggatgaattgcaatgatctagatcttaacaaagcttcattcttgttaaagaatgt 1126 ||||| ||||||||||| |||||| ||||||||||||||||| || |||||||||||||| Sbjct: 1182 agaccagatgaattgcagtgatcttgatcttaacaaagcttcgtttttgttaaagaatgt 1241 Query: 1127 cctcggaaattggagctcaaaggtgttcgctattgccttgttggcatctggtcagagttc 1186 ||||||||| |||||||||||| | || || | ||||||||||| ||||| |||||||| Sbjct: 1242 cctcggaaactggagctcaaagttatttgcagtagccttgttggcgtctggccagagttc 1301 Query: 1187 tacaattacaggaacttatgcaggacaatatgtcatgcaggggtttctggatctccggat 1246 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 1302 tacaattacaggaacttatgcgggacaatatgtcatgcaggggtttctagatcttcggat 1361 Query: 1247 gacgccctggttacggaaccttctaactaggtccctggcaattgtgcctagtcttattgt 1306 ||| |||||| ||||||||||||||||||||||| |||||||| |||| ||||| ||||| Sbjct: 1362 gacaccctggatacggaaccttctaactaggtccttggcaattctgccaagtctgattgt 1421 Query: 1307 gtcactagttggcggttcctcggcagctgggcagttgattatcactgcttcgatgatact 1366 || || |||| |||||||| |||||||| ||||||||||||| ||| ||||||||||| Sbjct: 1422 ttcgataattggaggttcctcagcagctggacagttgattatcattgcatcgatgatact 1481 Query: 1367 gtcattcgaacttccttttgctctagtaccactccttaaattcaccagtagcaaaacaaa 1426 |||||| || ||||||||||||||||| |||||||| |||||||| || |||| ||||| Sbjct: 1482 gtcatttgagcttccttttgctctagttccactcctaaaattcacaagcagcaggacaaa 1541 Query: 1427 gatggggcagcacacaaattcaagatttattaccgtgctaacatgggcgatcggctcctt 1486 |||||||||||||||||||||| | ||| | ||| ||||||||| || || || || Sbjct: 1542 aatggggcagcacacaaattcaaaagccatttctgtgataacatggggaattggttcgtt 1601 Query: 1487 catcatggtcatcaacatctacttcctgataacaagcttcgtcaagctgctccttcacaa 1546 ||| | |||||||||| ||||||||||||||||||||| ||||||||||| || ||||| Sbjct: 1602 tatcgttgtcatcaacacctacttcctgataacaagctttgtcaagctgcttctccacaa 1661 Query: 1547 cgggctatccaccgtctcccaagtattcgcggggatatttgggttcctcggcatgctcat 1606 ||| ||||| || || |||||||||||| | |||||||| || ||||| || |||||||| Sbjct: 1662 cggtctatcgactgtatcccaagtattctccgggatattcggtttcctggggatgctcat 1721 Query: 1607 atacatcgccgcaattctctacctcgtcttcaggaagaacaggaa 1651 |||||| || ||||||||||||||||| ||| ||||||||||||| Sbjct: 1722 atacatggctgcaattctctacctcgttttccggaagaacaggaa 1766 Score = 105 bits (53), Expect = 6e-19 Identities = 62/65 (95%) Strand = Plus / Plus Query: 1713 ggagaaggttctcttggccatcttccccgggaggatatctccagcatgcagcttcctcat 1772 ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 1834 ggagaaggttctcttggccatctgccccgggaggacatctccagcatgcagcttcctcag 1893 Query: 1773 cagcg 1777 ||||| Sbjct: 1894 cagcg 1898
>dbj|AK070574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058M15, full insert sequence Length = 2197 Score = 1612 bits (813), Expect = 0.0 Identities = 1317/1485 (88%) Strand = Plus / Plus Query: 167 gcaatgctcgtcgcagccgcagtttatgactagcgtcgggcagaacaatacctcgaatgg 226 |||| ||||||||||||| |||||||| ||||||||| || ||||||| |||||||| Sbjct: 283 gcaacgctcgtcgcagccacagtttatctctagcgtcgagcggaacaatcaatcgaatgg 342 Query: 227 accggggacccctcttattgacagcatagatgttgatcagattgttatccctgagaaaaa 286 || || || |||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 343 tcctggcactcctcttattgacagcatagatgttgatcagattgttattccagagaaaaa 402 Query: 287 tagctggaagaacttattttcatacatagggcccggttttctcgtctctatcgcctatat 346 ||| ||||||||| |||||||||||||||||||||| ||||| |||||||| || ||||| Sbjct: 403 tagttggaagaacctattttcatacatagggcccggatttcttgtctctattgcgtatat 462 Query: 347 cgatcctggcaattttgagacggacctacaggctggagcacagtacaaatacgagcttct 406 |||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 463 tgatcctggaaattttgagacagacctacaggctggagcacagtacaaatatgagcttct 522 Query: 407 ttggatcatacttattgcatcatgtgctgcacttgtaattcaatcgcttgcagccagcct 466 |||||||||||||||||| ||||||||||| ||| |||||||||| |||||||| || || Sbjct: 523 ttggatcatacttattgcgtcatgtgctgctcttataattcaatcacttgcagctaggct 582 Query: 467 aggtgttgtgactgggaagcatcttgctgagcactgcagggctgaatatcccaaggtcac 526 ||| || |||||||||||||| || || ||||| ||||| ||||||||||| |||| || Sbjct: 583 aggagtcgtgactgggaagcacctggccgagcattgcagagctgaatatccaaaggctac 642 Query: 527 aaatttcatcttatggattcttgcagaactggctgtagttgcgtgcgacattcctgaagt 586 ||||||||| |||||||||||||| ||||| ||||||||||| ||||||||||||||||| Sbjct: 643 aaatttcatattatggattcttgcggaactagctgtagttgcatgcgacattcctgaagt 702 Query: 587 aattggaactgcttttgctttgaacatgctcttcaaaattccaatatggtgcggtgttct 646 ||||||||||||||||||||||||||||||||| ||||| || | ||||| |||||||| Sbjct: 703 aattggaactgcttttgctttgaacatgctctttaaaatccctgtgtggtgtggtgttct 762 Query: 647 cataactgggctcagcactctgatgctcctgttcctgcaacagtacgggatccgtaaact 706 |||||||| ||||||||||||||||| ||||| || ||||| || ||| |||||||||| Sbjct: 763 gataactggactcagcactctgatgctactgttactacaacaatatggggtccgtaaact 822 Query: 707 ggaatttctgatagcatttctggtattcttgatagcaacttgcttcttagttgaacttgg 766 ||||||||||||||| ||||||| | || ||||||||||| ||||||||||| ||||| Sbjct: 823 ggaatttctgatagctattctggtgtcattaatagcaacttgtttcttagttgagcttgg 882 Query: 767 gtattctaaaccaaactcttcagaagttgtgcgaggcctttttgttcctgaaattaaagg 826 ||||||||||||||| ||||||||||||||| | |||||||||||||||||| ||||||| Sbjct: 883 gtattctaaaccaaattcttcagaagttgtgaggggcctttttgttcctgaacttaaagg 942 Query: 827 agatggagctacaggtcttgctatctcactacttggtgctatggtgatgccgcacaatct 886 ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 943 gaatggagccacaggtcttgctatctcactacttggtgctatggtgatgccgcataatct 1002 Query: 887 ttttcttcactcagcattggtactatcaagaaaagtaccacgatcagtgcatgggatcaa 946 |||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 1003 ttttctccactcagcattggtactatcaagaaaagtgccacggtcagttcatgggatcaa 1062 Query: 947 agaggcctgtagattctatatgattgaaagtgcatttgccctcacagtagcctttctgat 1006 |||||| |||||||||||||||||||||||||||||||||||||| |||| || || || Sbjct: 1063 agaggcatgtagattctatatgattgaaagtgcatttgccctcacgatagcgttcctcat 1122 Query: 1007 caacatatctatcatatctgtcagtggtgcagtttgcagtgcagataatttgaaccctga 1066 |||||||||||||||||||| |||||||| || ||| | |||||||||||| ||||| Sbjct: 1123 taacatatctatcatatctgttagtggtgctgtctgcgggtcagataatttgagtcctga 1182 Query: 1067 agaccggatgaattgcaatgatctagatcttaacaaagcttcattcttgttaaagaatgt 1126 ||||| ||||||||||| |||||| ||||||||||||||||| || |||||||||||||| Sbjct: 1183 agaccagatgaattgcagtgatcttgatcttaacaaagcttcgtttttgttaaagaatgt 1242 Query: 1127 cctcggaaattggagctcaaaggtgttcgctattgccttgttggcatctggtcagagttc 1186 ||||||||| |||||||||||| | || || | ||||||||||| ||||| |||||||| Sbjct: 1243 cctcggaaactggagctcaaagttatttgcagtagccttgttggcgtctggccagagttc 1302 Query: 1187 tacaattacaggaacttatgcaggacaatatgtcatgcaggggtttctggatctccggat 1246 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 1303 tacaattacaggaacttatgcgggacaatatgtcatgcaggggtttctagatcttcggat 1362 Query: 1247 gacgccctggttacggaaccttctaactaggtccctggcaattgtgcctagtcttattgt 1306 ||| |||||| ||||||||||||||||||||||| |||||||| |||| ||||| ||||| Sbjct: 1363 gacaccctggatacggaaccttctaactaggtccttggcaattctgccaagtctgattgt 1422 Query: 1307 gtcactagttggcggttcctcggcagctgggcagttgattatcactgcttcgatgatact 1366 || || |||| |||||||| |||||||| ||||||||||||| ||| ||||||||||| Sbjct: 1423 ttcgataattggaggttcctcagcagctggacagttgattatcattgcatcgatgatact 1482 Query: 1367 gtcattcgaacttccttttgctctagtaccactccttaaattcaccagtagcaaaacaaa 1426 |||||| || ||||||||||||||||| |||||||| |||||||| || |||| ||||| Sbjct: 1483 gtcatttgagcttccttttgctctagttccactcctaaaattcacaagcagcaggacaaa 1542 Query: 1427 gatggggcagcacacaaattcaagatttattaccgtgctaacatgggcgatcggctcctt 1486 |||||||||||||||||||||| | ||| | ||| ||||||||| || || || || Sbjct: 1543 aatggggcagcacacaaattcaaaagccatttctgtgataacatggggaattggttcgtt 1602 Query: 1487 catcatggtcatcaacatctacttcctgataacaagcttcgtcaagctgctccttcacaa 1546 ||| | |||||||||| ||||||||||||||||||||| ||||||||||| || ||||| Sbjct: 1603 tatcgttgtcatcaacacctacttcctgataacaagctttgtcaagctgcttctccacaa 1662 Query: 1547 cgggctatccaccgtctcccaagtattcgcggggatatttgggttcctcggcatgctcat 1606 ||| ||||| || || |||||||||||| | |||||||| || ||||| || |||||||| Sbjct: 1663 cggtctatcgactgtatcccaagtattctccgggatattcggtttcctggggatgctcat 1722 Query: 1607 atacatcgccgcaattctctacctcgtcttcaggaagaacaggaa 1651 |||||| || ||||||||||||||||| ||| ||||||||||||| Sbjct: 1723 atacatggctgcaattctctacctcgttttccggaagaacaggaa 1767 Score = 105 bits (53), Expect = 6e-19 Identities = 62/65 (95%) Strand = Plus / Plus Query: 1713 ggagaaggttctcttggccatcttccccgggaggatatctccagcatgcagcttcctcat 1772 ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 1835 ggagaaggttctcttggccatctgccccgggaggacatctccagcatgcagcttcctcag 1894 Query: 1773 cagcg 1777 ||||| Sbjct: 1895 cagcg 1899
>gb|AY188777.1| Malus xiaojinensis integral membrane protein Nramp1 mRNA, partial cds Length = 704 Score = 1251 bits (631), Expect = 0.0 Identities = 679/695 (97%) Strand = Plus / Plus Query: 471 gttgtgactgggaagcatcttgctgagcactgcagggctgaatatcccaaggtcacaaat 530 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1 gttgtgactgggaagcatcttgctgagcactgcagggatgaatatcccaaggtcacaaac 60 Query: 531 ttcatcttatggattcttgcagaactggctgtagttgcgtgcgacattcctgaagtaatt 590 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ttcatcttatggattcttgcagaactggctgtagttgcgtgcgacattcctgaagtaatt 120 Query: 591 ggaactgcttttgctttgaacatgctcttcaaaattccaatatggtgcggtgttctcata 650 ||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 121 ggaaccgcttttgctttgaacatgctcttcaaaattccgatatggtgtggtgttctcata 180 Query: 651 actgggctcagcactctgatgctcctgttcctgcaacagtacgggatccgtaaactggaa 710 |||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||| Sbjct: 181 actgggctcagcactctgatgctcctgttcctgcaacaatatggggtccgtaaactggaa 240 Query: 711 tttctgatagcatttctggtattcttgatagcaacttgcttcttagttgaacttgggtat 770 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tttctgatagcatttttggtattcttgatagcaacttgcttcttagttgaacttgggtat 300 Query: 771 tctaaaccaaactcttcagaagttgtgcgaggcctttttgttcctgaaattaaaggagat 830 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tctaaaccaaattcttcagaagttgtgcgaggcctttttgttcctgaaattaaaggagat 360 Query: 831 ggagctacaggtcttgctatctcactacttggtgctatggtgatgccgcacaatcttttt 890 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ggagctacaggtcttgctatctcactacttggtgctatggtgatgccgcacaatcttttt 420 Query: 891 cttcactcagcattggtactatcaagaaaagtaccacgatcagtgcatgggatcaaagag 950 || ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 421 ctccactcagcattggtactgtcaagaaaagtaccacgatcagttcatgggatcaaagag 480 Query: 951 gcctgtagattctatatgattgaaagtgcatttgccctcacagtagcctttctgatcaac 1010 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 481 gcctgtagattctatatgattgaaagtgcatttgccctcacagtagcatttctgatcaac 540 Query: 1011 atatctatcatatctgtcagtggtgcagtttgcagtgcagataatttgaaccctgaagac 1070 || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 atctctatcatatctgttagtggtgcagtttgcagtgcagataatttgaaccctgaagac 600 Query: 1071 cggatgaattgcaatgatctagatcttaacaaagcttcattcttgttaaagaatgtcctc 1130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 cggatgaattgcaatgatctagatcttaacaaagcttcattcttgttaaagaatgtcctc 660 Query: 1131 ggaaattggagctcaaaggtgttcgctattgcctt 1165 ||||||||||||||||||||||||||||||||||| Sbjct: 661 ggaaattggagctcaaaggtgttcgctattgcctt 695
>gb|U60767.1|OSU60767 Oryza sativa integral membrane protein (OsNramp3) mRNA, partial cds Length = 1157 Score = 1090 bits (550), Expect = 0.0 Identities = 1000/1143 (87%), Gaps = 9/1143 (0%) Strand = Plus / Plus Query: 315 gggcccggttttctcgtctctatcgcctatatcgatcctggcaattttgagacggaccta 374 |||||||| ||||| ||||||| || ||||| |||||||| ||||||||||| |||||| Sbjct: 7 gggcccggatttcttatctctattgcgtatattgatcctggaaattttgagacagaccta 66 Query: 375 caggctggagcacagtacaaatacgagcttctttggatcatacttattgcatcatgtgct 434 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 67 caggctggagcacagtacaaatatgagcttctttggatcatacttattgcgtcatgtgct 126 Query: 435 gcacttgtaattcaatcgcttgcagccagcctaggtgttgtgactgggaagcatcttg-- 492 || ||| |||||||||| |||||||| || ||||| || ||||||||||||| | || Sbjct: 127 gctcttataattcaatcacttgcagctaggctaggagtcgtgactgggaagccacctggc 186 Query: 493 ctgagcactgcagggctg-aatatcccaaggtcacaaatttcatcttatggattcttgca 551 | ||||| ||||| | || ||||||| |||| ||||||||||| |||||||||||||| Sbjct: 187 ccgagcattgcagaggtggaatatccaaaggctacaaatttcatattatggattcttgcg 246 Query: 552 gaactggctgtagttgcgtgcgacattcctgaagtaattggaactgcttttgctttgaac 611 ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gaactagctgtagttgcatgcgacattcctgaagtaattggaactgcttttgctttgaac 306 Query: 612 atgctcttcaaaattccaatatggtgcggtg-ttctcataactgggctcagcactctgat 670 |||||||| ||| | || | ||||| |||| |||| |||||||| |||||||||||||| Sbjct: 307 atgctctttaaa-tccctgtgtggtgtggtgattctgataactggactcagcactctgat 365 Query: 671 gctcctgttcctgcaacagtacgggatccgtaaactggaatttctgatagcatttctggt 730 ||| ||||| || ||||| || ||| ||||||||||||||||||||||||| ||||||| Sbjct: 366 gctactgttactacaacaatatggggtccgtaaactggaatttctgatagctattctggt 425 Query: 731 attcttgatagcaacttgcttcttagttgaacttgggtattctaaaccaaactcttcaga 790 | || ||||||||||| ||||||||||| |||||||||||||||||||| ||||||| Sbjct: 426 gtcattaatagcaacttgtttcttagttgagcttgggtattctaaaccaaattcttcagt 485 Query: 791 agttgtgcgaggcctttttgttcctgaaattaaaggagatggagctacaggtcttgctat 850 |||||| | |||||||||||||||||| ||||||| ||||||| |||||||||||||| Sbjct: 486 ggttgtgaggggcctttttgttcctgaacttaaagggaatggagccacaggtcttgctat 545 Query: 851 ctcactacttggtgctatggtgatgccgcacaatctttttcttcactcagcattggtact 910 |||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| Sbjct: 546 ctcactacttggtgctatggtgatgccgcataatctttttctccactcagaattggtact 605 Query: 911 atcaagaaaagtaccacgatcagtgcatgggatcaaagaggcctgtagattctatatgat 970 ||||||||||| | | | ||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 606 atcaagaaaagaaaaaaggtcagttcatgggatcaaagaggcatgtagattctatatgat 665 Query: 971 tgaaagtgcattt---gccctcacagtagcctttctgatcaacatatctatcatatctgt 1027 ||||||||||||| |||||||| |||| || || || |||||||||||||||||||| Sbjct: 666 tgaaagtgcatttttggccctcacgatagcgttcctcattaacatatctatcatatctgt 725 Query: 1028 cagtggtgcagtttgcagtgcagataatttgaaccctgaagaccggatgaattgcaatga 1087 | | | | || ||| | |||||||||||| |||||||||| ||||||||||| ||| Sbjct: 726 taataatactgtctgcgggtcagataatttgagtcctgaagaccagatgaattgcagtga 785 Query: 1088 tctagatcttaacaaagcttcattcttgttaaagaatgtcctcggaaattggagctcaaa 1147 ||| ||||||||||||||||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 786 tcttgatcttaacaaagcttcgtttttgttaaagaatgtcctcggaaactggagctcaaa 845 Query: 1148 ggtgttcgctattgccttgttggcatctggtcagagttctacaattacaggaacttatgc 1207 | | || || | ||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 846 gttatttgcagtagccttgttggcgtctggccagagttctacaattacaggaacttatgc 905 Query: 1208 aggacaatatgtcatgcaggggtttctggatctccggatgacgccctggttacggaacct 1267 |||||||||||||||||||||||||| ||||| |||||||| |||||| |||||||||| Sbjct: 906 gggacaatatgtcatgcaggggtttctagatcttcggatgacaccctggatacggaacct 965 Query: 1268 tctaactaggtccctggcaattgtgcctagtcttattgtgtcactagttggcggttcctc 1327 ||||||||||||| |||||||| |||| ||||| ||||| || || |||| |||||||| Sbjct: 966 tctaactaggtccttggcaattctgccaagtctgattgtttcgataattggaggttcctc 1025 Query: 1328 ggcagctgggcagttgattatcactgcttcgatgatactgtcattcga-acttccttttg 1386 |||||||| ||||||||||||| ||| |||||||||||| |||| || |||||||| Sbjct: 1026 agcagctggacagttgattatcattgcatcgatgatactgacatttgagccttcctttgc 1085 Query: 1387 ctctagtaccactccttaaattcaccagtagcaaaacaaagatggggcagcacacaaatt 1446 ||||||| |||||||| |||||||| || |||| ||||| ||||||||||||||||||| Sbjct: 1086 ctctagttccactcctaaaattcacaagcagcaggacaaaaatggggcagcacacaaatt 1145 Query: 1447 caa 1449 ||| Sbjct: 1146 caa 1148
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 242 bits (122), Expect = 4e-60 Identities = 167/182 (91%) Strand = Plus / Minus Query: 697 tccgtaaactggaatttctgatagcatttctggtattcttgatagcaacttgcttcttag 756 ||||||||||||||||||||||||| ||||||| | || ||||||||||| ||||||| Sbjct: 27678695 tccgtaaactggaatttctgatagctattctggtgtcattaatagcaacttgtttcttag 27678636 Query: 757 ttgaacttgggtattctaaaccaaactcttcagaagttgtgcgaggcctttttgttcctg 816 |||| |||||||||||||||||||| ||||||||||||||| | |||||||||||||||| Sbjct: 27678635 ttgagcttgggtattctaaaccaaattcttcagaagttgtgaggggcctttttgttcctg 27678576 Query: 817 aaattaaaggagatggagctacaggtcttgctatctcactacttggtgctatggtgatgc 876 || ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 27678575 aacttaaagggaatggagccacaggtcttgctatctcactacttggtgctatggtgatgc 27678516 Query: 877 cg 878 || Sbjct: 27678515 cg 27678514 Score = 186 bits (94), Expect = 2e-43 Identities = 154/174 (88%) Strand = Plus / Minus Query: 948 gaggcctgtagattctatatgattgaaagtgcatttgccctcacagtagcctttctgatc 1007 ||||| |||||||||||||||||||||||||||||||||||||| |||| || || || Sbjct: 27678119 gaggcatgtagattctatatgattgaaagtgcatttgccctcacgatagcgttcctcatt 27678060 Query: 1008 aacatatctatcatatctgtcagtggtgcagtttgcagtgcagataatttgaaccctgaa 1067 |||||||||||||||||||| |||||||| || ||| | |||||||||||| |||||| Sbjct: 27678059 aacatatctatcatatctgttagtggtgctgtctgcgggtcagataatttgagtcctgaa 27678000 Query: 1068 gaccggatgaattgcaatgatctagatcttaacaaagcttcattcttgttaaag 1121 |||| ||||||||||| |||||| ||||||||||||||||| || ||||||||| Sbjct: 27677999 gaccagatgaattgcagtgatcttgatcttaacaaagcttcgtttttgttaaag 27677946 Score = 170 bits (86), Expect = 1e-38 Identities = 140/158 (88%) Strand = Plus / Minus Query: 1494 gtcatcaacatctacttcctgataacaagcttcgtcaagctgctccttcacaacgggcta 1553 |||||||||| ||||||||||||||||||||| ||||||||||| || |||||||| ||| Sbjct: 27676483 gtcatcaacacctacttcctgataacaagctttgtcaagctgcttctccacaacggtcta 27676424 Query: 1554 tccaccgtctcccaagtattcgcggggatatttgggttcctcggcatgctcatatacatc 1613 || || || |||||||||||| | |||||||| || ||||| || |||||||||||||| Sbjct: 27676423 tcgactgtatcccaagtattctccgggatattcggtttcctggggatgctcatatacatg 27676364 Query: 1614 gccgcaattctctacctcgtcttcaggaagaacaggaa 1651 || ||||||||||||||||| ||| ||||||||||||| Sbjct: 27676363 gctgcaattctctacctcgttttccggaagaacaggaa 27676326 Score = 141 bits (71), Expect = 1e-29 Identities = 104/115 (90%) Strand = Plus / Minus Query: 1113 ttgttaaagaatgtcctcggaaattggagctcaaaggtgttcgctattgccttgttggca 1172 |||||| |||||||||||||||| |||||||||||| | || || | ||||||||||| Sbjct: 27677631 ttgttatagaatgtcctcggaaactggagctcaaagttatttgcagtagccttgttggcg 27677572 Query: 1173 tctggtcagagttctacaattacaggaacttatgcaggacaatatgtcatgcagg 1227 ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 27677571 tctggccagagttctacaattacaggaacttatgcgggacaatatgtcatgcagg 27677517 Score = 131 bits (66), Expect = 1e-26 Identities = 111/126 (88%) Strand = Plus / Minus Query: 1225 aggggtttctggatctccggatgacgccctggttacggaaccttctaactaggtccctgg 1284 |||||||||| ||||| |||||||| |||||| ||||||||||||||||||||||| ||| Sbjct: 27676978 aggggtttctagatcttcggatgacaccctggatacggaaccttctaactaggtccttgg 27676919 Query: 1285 caattgtgcctagtcttattgtgtcactagttggcggttcctcggcagctgggcagttga 1344 ||||| |||| ||||| ||||| || || |||| |||||||| |||||||| ||||||| Sbjct: 27676918 caattctgccaagtctgattgtttcgataattggaggttcctcagcagctggacagttga 27676859 Query: 1345 ttatca 1350 |||||| Sbjct: 27676858 ttatca 27676853 Score = 121 bits (61), Expect = 1e-23 Identities = 94/105 (89%) Strand = Plus / Minus Query: 584 agtaattggaactgcttttgctttgaacatgctcttcaaaattccaatatggtgcggtgt 643 |||||||||||||||||||||||||||||||||||| ||||| || | ||||| ||||| Sbjct: 27679085 agtaattggaactgcttttgctttgaacatgctctttaaaatccctgtgtggtgtggtgt 27679026 Query: 644 tctcataactgggctcagcactctgatgctcctgttcctgcaaca 688 ||| |||||||| ||||||||||||||||| ||||| || ||||| Sbjct: 27679025 tctgataactggactcagcactctgatgctactgttactacaaca 27678981 Score = 115 bits (58), Expect = 7e-22 Identities = 94/106 (88%) Strand = Plus / Minus Query: 480 gggaagcatcttgctgagcactgcagggctgaatatcccaaggtcacaaatttcatctta 539 |||||||| || || ||||| ||||| ||||||||||| |||| ||||||||||| ||| Sbjct: 27679465 gggaagcacctggccgagcattgcagagctgaatatccaaaggctacaaatttcatatta 27679406 Query: 540 tggattcttgcagaactggctgtagttgcgtgcgacattcctgaag 585 ||||||||||| ||||| ||||||||||| |||||||||||||||| Sbjct: 27679405 tggattcttgcggaactagctgtagttgcatgcgacattcctgaag 27679360 Score = 111 bits (56), Expect = 1e-20 Identities = 83/92 (90%) Strand = Plus / Minus Query: 1358 gatgatactgtcattcgaacttccttttgctctagtaccactccttaaattcaccagtag 1417 ||||||||||||||| || ||||||||||||||||| |||||||| |||||||| || || Sbjct: 27676704 gatgatactgtcatttgagcttccttttgctctagttccactcctaaaattcacaagcag 27676645 Query: 1418 caaaacaaagatggggcagcacacaaattcaa 1449 || ||||| |||||||||||||||||||||| Sbjct: 27676644 caggacaaaaatggggcagcacacaaattcaa 27676613 Score = 111 bits (56), Expect = 1e-20 Identities = 95/108 (87%) Strand = Plus / Minus Query: 167 gcaatgctcgtcgcagccgcagtttatgactagcgtcgggcagaacaatacctcgaatgg 226 |||| ||||||||||||| |||||||| ||||||||| || ||||||| |||||||| Sbjct: 27680478 gcaacgctcgtcgcagccacagtttatctctagcgtcgagcggaacaatcaatcgaatgg 27680419 Query: 227 accggggacccctcttattgacagcatagatgttgatcagattgttat 274 || || || |||||||||||||||||||||||||||||||||||||| Sbjct: 27680418 tcctggcactcctcttattgacagcatagatgttgatcagattgttat 27680371 Score = 105 bits (53), Expect = 6e-19 Identities = 62/65 (95%) Strand = Plus / Minus Query: 1713 ggagaaggttctcttggccatcttccccgggaggatatctccagcatgcagcttcctcat 1772 ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 27676258 ggagaaggttctcttggccatctgccccgggaggacatctccagcatgcagcttcctcag 27676199 Query: 1773 cagcg 1777 ||||| Sbjct: 27676198 cagcg 27676194 Score = 101 bits (51), Expect = 1e-17 Identities = 63/67 (94%) Strand = Plus / Minus Query: 882 aatctttttcttcactcagcattggtactatcaagaaaagtaccacgatcagtgcatggg 941 ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 27678426 aatctttttctccactcagcattggtactatcaagaaaagtgccacggtcagttcatggg 27678367 Query: 942 atcaaag 948 ||||||| Sbjct: 27678366 atcaaag 27678360 Score = 99.6 bits (50), Expect = 4e-17 Identities = 74/82 (90%) Strand = Plus / Minus Query: 400 agcttctttggatcatacttattgcatcatgtgctgcacttgtaattcaatcgcttgcag 459 ||||||||||||||||||||||||| ||||||||||| ||| |||||||||| ||||||| Sbjct: 27679650 agcttctttggatcatacttattgcgtcatgtgctgctcttataattcaatcacttgcag 27679591 Query: 460 ccagcctaggtgttgtgactgg 481 | || ||||| || |||||||| Sbjct: 27679590 ctaggctaggagtcgtgactgg 27679569 Score = 97.6 bits (49), Expect = 2e-16 Identities = 73/81 (90%) Strand = Plus / Minus Query: 280 agaaaaatagctggaagaacttattttcatacatagggcccggttttctcgtctctatcg 339 |||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||| | Sbjct: 27680011 agaaaaatagttggaagaacctattttcatacatagggcccggatttcttgtctctattg 27679952 Query: 340 cctatatcgatcctggcaatt 360 | ||||| |||||||| |||| Sbjct: 27679951 cgtatattgatcctggaaatt 27679931 Score = 65.9 bits (33), Expect = 5e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 361 ttgagacggacctacaggctggagcacagtacaaata 397 ||||||| ||||||||||||||||||||||||||||| Sbjct: 27679848 ttgagacagacctacaggctggagcacagtacaaata 27679812
>dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1153E06 Length = 174588 Score = 242 bits (122), Expect = 4e-60 Identities = 167/182 (91%) Strand = Plus / Minus Query: 697 tccgtaaactggaatttctgatagcatttctggtattcttgatagcaacttgcttcttag 756 ||||||||||||||||||||||||| ||||||| | || ||||||||||| ||||||| Sbjct: 27950 tccgtaaactggaatttctgatagctattctggtgtcattaatagcaacttgtttcttag 27891 Query: 757 ttgaacttgggtattctaaaccaaactcttcagaagttgtgcgaggcctttttgttcctg 816 |||| |||||||||||||||||||| ||||||||||||||| | |||||||||||||||| Sbjct: 27890 ttgagcttgggtattctaaaccaaattcttcagaagttgtgaggggcctttttgttcctg 27831 Query: 817 aaattaaaggagatggagctacaggtcttgctatctcactacttggtgctatggtgatgc 876 || ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 27830 aacttaaagggaatggagccacaggtcttgctatctcactacttggtgctatggtgatgc 27771 Query: 877 cg 878 || Sbjct: 27770 cg 27769 Score = 186 bits (94), Expect = 2e-43 Identities = 154/174 (88%) Strand = Plus / Minus Query: 948 gaggcctgtagattctatatgattgaaagtgcatttgccctcacagtagcctttctgatc 1007 ||||| |||||||||||||||||||||||||||||||||||||| |||| || || || Sbjct: 27374 gaggcatgtagattctatatgattgaaagtgcatttgccctcacgatagcgttcctcatt 27315 Query: 1008 aacatatctatcatatctgtcagtggtgcagtttgcagtgcagataatttgaaccctgaa 1067 |||||||||||||||||||| |||||||| || ||| | |||||||||||| |||||| Sbjct: 27314 aacatatctatcatatctgttagtggtgctgtctgcgggtcagataatttgagtcctgaa 27255 Query: 1068 gaccggatgaattgcaatgatctagatcttaacaaagcttcattcttgttaaag 1121 |||| ||||||||||| |||||| ||||||||||||||||| || ||||||||| Sbjct: 27254 gaccagatgaattgcagtgatcttgatcttaacaaagcttcgtttttgttaaag 27201 Score = 170 bits (86), Expect = 1e-38 Identities = 140/158 (88%) Strand = Plus / Minus Query: 1494 gtcatcaacatctacttcctgataacaagcttcgtcaagctgctccttcacaacgggcta 1553 |||||||||| ||||||||||||||||||||| ||||||||||| || |||||||| ||| Sbjct: 25738 gtcatcaacacctacttcctgataacaagctttgtcaagctgcttctccacaacggtcta 25679 Query: 1554 tccaccgtctcccaagtattcgcggggatatttgggttcctcggcatgctcatatacatc 1613 || || || |||||||||||| | |||||||| || ||||| || |||||||||||||| Sbjct: 25678 tcgactgtatcccaagtattctccgggatattcggtttcctggggatgctcatatacatg 25619 Query: 1614 gccgcaattctctacctcgtcttcaggaagaacaggaa 1651 || ||||||||||||||||| ||| ||||||||||||| Sbjct: 25618 gctgcaattctctacctcgttttccggaagaacaggaa 25581 Score = 141 bits (71), Expect = 1e-29 Identities = 104/115 (90%) Strand = Plus / Minus Query: 1113 ttgttaaagaatgtcctcggaaattggagctcaaaggtgttcgctattgccttgttggca 1172 |||||| |||||||||||||||| |||||||||||| | || || | ||||||||||| Sbjct: 26886 ttgttatagaatgtcctcggaaactggagctcaaagttatttgcagtagccttgttggcg 26827 Query: 1173 tctggtcagagttctacaattacaggaacttatgcaggacaatatgtcatgcagg 1227 ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 26826 tctggccagagttctacaattacaggaacttatgcgggacaatatgtcatgcagg 26772 Score = 131 bits (66), Expect = 1e-26 Identities = 111/126 (88%) Strand = Plus / Minus Query: 1225 aggggtttctggatctccggatgacgccctggttacggaaccttctaactaggtccctgg 1284 |||||||||| ||||| |||||||| |||||| ||||||||||||||||||||||| ||| Sbjct: 26233 aggggtttctagatcttcggatgacaccctggatacggaaccttctaactaggtccttgg 26174 Query: 1285 caattgtgcctagtcttattgtgtcactagttggcggttcctcggcagctgggcagttga 1344 ||||| |||| ||||| ||||| || || |||| |||||||| |||||||| ||||||| Sbjct: 26173 caattctgccaagtctgattgtttcgataattggaggttcctcagcagctggacagttga 26114 Query: 1345 ttatca 1350 |||||| Sbjct: 26113 ttatca 26108 Score = 121 bits (61), Expect = 1e-23 Identities = 94/105 (89%) Strand = Plus / Minus Query: 584 agtaattggaactgcttttgctttgaacatgctcttcaaaattccaatatggtgcggtgt 643 |||||||||||||||||||||||||||||||||||| ||||| || | ||||| ||||| Sbjct: 28340 agtaattggaactgcttttgctttgaacatgctctttaaaatccctgtgtggtgtggtgt 28281 Query: 644 tctcataactgggctcagcactctgatgctcctgttcctgcaaca 688 ||| |||||||| ||||||||||||||||| ||||| || ||||| Sbjct: 28280 tctgataactggactcagcactctgatgctactgttactacaaca 28236 Score = 115 bits (58), Expect = 7e-22 Identities = 94/106 (88%) Strand = Plus / Minus Query: 480 gggaagcatcttgctgagcactgcagggctgaatatcccaaggtcacaaatttcatctta 539 |||||||| || || ||||| ||||| ||||||||||| |||| ||||||||||| ||| Sbjct: 28720 gggaagcacctggccgagcattgcagagctgaatatccaaaggctacaaatttcatatta 28661 Query: 540 tggattcttgcagaactggctgtagttgcgtgcgacattcctgaag 585 ||||||||||| ||||| ||||||||||| |||||||||||||||| Sbjct: 28660 tggattcttgcggaactagctgtagttgcatgcgacattcctgaag 28615 Score = 111 bits (56), Expect = 1e-20 Identities = 83/92 (90%) Strand = Plus / Minus Query: 1358 gatgatactgtcattcgaacttccttttgctctagtaccactccttaaattcaccagtag 1417 ||||||||||||||| || ||||||||||||||||| |||||||| |||||||| || || Sbjct: 25959 gatgatactgtcatttgagcttccttttgctctagttccactcctaaaattcacaagcag 25900 Query: 1418 caaaacaaagatggggcagcacacaaattcaa 1449 || ||||| |||||||||||||||||||||| Sbjct: 25899 caggacaaaaatggggcagcacacaaattcaa 25868 Score = 111 bits (56), Expect = 1e-20 Identities = 95/108 (87%) Strand = Plus / Minus Query: 167 gcaatgctcgtcgcagccgcagtttatgactagcgtcgggcagaacaatacctcgaatgg 226 |||| ||||||||||||| |||||||| ||||||||| || ||||||| |||||||| Sbjct: 29733 gcaacgctcgtcgcagccacagtttatctctagcgtcgagcggaacaatcaatcgaatgg 29674 Query: 227 accggggacccctcttattgacagcatagatgttgatcagattgttat 274 || || || |||||||||||||||||||||||||||||||||||||| Sbjct: 29673 tcctggcactcctcttattgacagcatagatgttgatcagattgttat 29626 Score = 105 bits (53), Expect = 6e-19 Identities = 62/65 (95%) Strand = Plus / Minus Query: 1713 ggagaaggttctcttggccatcttccccgggaggatatctccagcatgcagcttcctcat 1772 ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 25513 ggagaaggttctcttggccatctgccccgggaggacatctccagcatgcagcttcctcag 25454 Query: 1773 cagcg 1777 ||||| Sbjct: 25453 cagcg 25449 Score = 101 bits (51), Expect = 1e-17 Identities = 63/67 (94%) Strand = Plus / Minus Query: 882 aatctttttcttcactcagcattggtactatcaagaaaagtaccacgatcagtgcatggg 941 ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 27681 aatctttttctccactcagcattggtactatcaagaaaagtgccacggtcagttcatggg 27622 Query: 942 atcaaag 948 ||||||| Sbjct: 27621 atcaaag 27615 Score = 99.6 bits (50), Expect = 4e-17 Identities = 74/82 (90%) Strand = Plus / Minus Query: 400 agcttctttggatcatacttattgcatcatgtgctgcacttgtaattcaatcgcttgcag 459 ||||||||||||||||||||||||| ||||||||||| ||| |||||||||| ||||||| Sbjct: 28905 agcttctttggatcatacttattgcgtcatgtgctgctcttataattcaatcacttgcag 28846 Query: 460 ccagcctaggtgttgtgactgg 481 | || ||||| || |||||||| Sbjct: 28845 ctaggctaggagtcgtgactgg 28824 Score = 97.6 bits (49), Expect = 2e-16 Identities = 73/81 (90%) Strand = Plus / Minus Query: 280 agaaaaatagctggaagaacttattttcatacatagggcccggttttctcgtctctatcg 339 |||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||| | Sbjct: 29266 agaaaaatagttggaagaacctattttcatacatagggcccggatttcttgtctctattg 29207 Query: 340 cctatatcgatcctggcaatt 360 | ||||| |||||||| |||| Sbjct: 29206 cgtatattgatcctggaaatt 29186 Score = 65.9 bits (33), Expect = 5e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 361 ttgagacggacctacaggctggagcacagtacaaata 397 ||||||| ||||||||||||||||||||||||||||| Sbjct: 29103 ttgagacagacctacaggctggagcacagtacaaata 29067
>dbj|AB242564.1| Chengiopanax sciadophylloides CsNramp1 mRNA for NRAMP family metal transporter, complete cds Length = 1966 Score = 105 bits (53), Expect = 6e-19 Identities = 83/93 (89%) Strand = Plus / Plus Query: 528 aatttcatcttatggattcttgcagaactggctgtagttgcgtgcgacattcctgaagta 587 |||||||||||||||||||| || ||| | || ||||||| ||||||||||||||||| Sbjct: 514 aatttcatcttatggattctggctgaaatttctatagttgcatgcgacattcctgaagtg 573 Query: 588 attggaactgcttttgctttgaacatgctcttc 620 |||||||| || ||||||||||||||||||||| Sbjct: 574 attggaacagcatttgctttgaacatgctcttc 606 Score = 103 bits (52), Expect = 3e-18 Identities = 115/136 (84%) Strand = Plus / Plus Query: 843 cttgctatctcactacttggtgctatggtgatgccgcacaatctttttcttcactcagca 902 ||||| || ||||| |||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 829 cttgcaatttcactgcttggtgctatggttatgccgcataatcttttccttcactcagct 888 Query: 903 ttggtactatcaagaaaagtaccacgatcagtgcatgggatcaaagaggcctgtagattc 962 |||| || || |||||| ||||| |||| || |||| ||||||||||| || |||||| Sbjct: 889 ctggtgctttccagaaaaataccaagatctgttaatggcatcaaagaggcttgcagattc 948 Query: 963 tatatgattgaaagtg 978 |||||| | ||||||| Sbjct: 949 tatatggtagaaagtg 964 Score = 58.0 bits (29), Expect = 1e-04 Identities = 65/77 (84%) Strand = Plus / Plus Query: 1158 attgccttgttggcatctggtcagagttctacaattacaggaacttatgcaggacaatat 1217 ||||| ||| |||| || ||||| ||||| ||||| || ||||| ||||| || |||||| Sbjct: 1144 attgctttgctggcctcaggtcaaagttcaacaataactggaacctatgctgggcaatat 1203 Query: 1218 gtcatgcaggggtttct 1234 || |||||||||||||| Sbjct: 1204 gttatgcaggggtttct 1220
>gb|BT029300.1| Arabidopsis thaliana At1g80830 mRNA, complete cds Length = 1599 Score = 77.8 bits (39), Expect = 1e-10 Identities = 126/155 (81%) Strand = Plus / Plus Query: 262 atcagattgttatccctgagaaaaatagctggaagaacttattttcatacatagggcccg 321 |||||||| || || ||||||| || ||||||||||| || ||| | ||| |||| || | Sbjct: 98 atcagattattgtctctgagaagaagagctggaagaatttctttgcttacttaggccctg 157 Query: 322 gttttctcgtctctatcgcctatatcgatcctggcaattttgagacggacctacaggctg 381 ||||||| || || ||||| ||||| |||||||| || |||||||| || || || |||| Sbjct: 158 gttttcttgtttcaatcgcatatattgatcctggaaactttgagactgatctgcaagctg 217 Query: 382 gagcacagtacaaatacgagcttctttggatcata 416 ||||||| ||||| || || | |||||||||||| Sbjct: 218 gagcacactacaagtatgaattactttggatcata 252 Score = 65.9 bits (33), Expect = 5e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 1173 tctggtcagagttctacaattacaggaacttatgcaggacaatatgtcatgcaggggttt 1232 ||||||||||| || || || || ||||||||||| ||||||||||| |||||||| ||| Sbjct: 1009 tctggtcagagctcgacgataaccggaacttatgctggacaatatgtaatgcagggcttt 1068 Query: 1233 ctggatctc 1241 || |||||| Sbjct: 1069 cttgatctc 1077 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Plus Query: 561 gtagttgcgtgcgacattcctgaagtaattggaactgcttttgctttgaacatgctctt 619 |||||||| || ||||| || ||||| || ||||| ||||||||| ||||||||||||| Sbjct: 397 gtagttgcttgtgacataccggaagttatcggaacagcttttgctctgaacatgctctt 455
>ref|NM_106731.2| Arabidopsis thaliana NRAMP1; manganese ion transporter/ metal ion transporter (NRAMP1) mRNA, complete cds Length = 1838 Score = 77.8 bits (39), Expect = 1e-10 Identities = 126/155 (81%) Strand = Plus / Plus Query: 262 atcagattgttatccctgagaaaaatagctggaagaacttattttcatacatagggcccg 321 |||||||| || || ||||||| || ||||||||||| || ||| | ||| |||| || | Sbjct: 150 atcagattattgtctctgagaagaagagctggaagaatttctttgcttacttaggccctg 209 Query: 322 gttttctcgtctctatcgcctatatcgatcctggcaattttgagacggacctacaggctg 381 ||||||| || || ||||| ||||| |||||||| || |||||||| || || || |||| Sbjct: 210 gttttcttgtttcaatcgcatatattgatcctggaaactttgagactgatctgcaagctg 269 Query: 382 gagcacagtacaaatacgagcttctttggatcata 416 ||||||| ||||| || || | |||||||||||| Sbjct: 270 gagcacactacaagtatgaattactttggatcata 304 Score = 65.9 bits (33), Expect = 5e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 1173 tctggtcagagttctacaattacaggaacttatgcaggacaatatgtcatgcaggggttt 1232 ||||||||||| || || || || ||||||||||| ||||||||||| |||||||| ||| Sbjct: 1061 tctggtcagagctcgacgataaccggaacttatgctggacaatatgtaatgcagggcttt 1120 Query: 1233 ctggatctc 1241 || |||||| Sbjct: 1121 cttgatctc 1129 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Plus Query: 561 gtagttgcgtgcgacattcctgaagtaattggaactgcttttgctttgaacatgctctt 619 |||||||| || ||||| || ||||| || ||||| ||||||||| ||||||||||||| Sbjct: 449 gtagttgcttgtgacataccggaagttatcggaacagcttttgctctgaacatgctctt 507
>gb|AY086428.1| Arabidopsis thaliana clone 250751 mRNA, complete sequence Length = 1745 Score = 77.8 bits (39), Expect = 1e-10 Identities = 126/155 (81%) Strand = Plus / Plus Query: 262 atcagattgttatccctgagaaaaatagctggaagaacttattttcatacatagggcccg 321 |||||||| || || ||||||| || ||||||||||| || ||| | ||| |||| || | Sbjct: 132 atcagattattgtctctgagaagaagagctggaagaatttctttgcttacttaggccctg 191 Query: 322 gttttctcgtctctatcgcctatatcgatcctggcaattttgagacggacctacaggctg 381 ||||||| || || ||||| ||||| |||||||| || |||||||| || || || |||| Sbjct: 192 gttttcttgtttcaatcgcatatattgatcctggaaactttgagactgatctgcaagctg 251 Query: 382 gagcacagtacaaatacgagcttctttggatcata 416 ||||||| ||||| || || | |||||||||||| Sbjct: 252 gagcacactacaagtatgaattactttggatcata 286 Score = 65.9 bits (33), Expect = 5e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 1173 tctggtcagagttctacaattacaggaacttatgcaggacaatatgtcatgcaggggttt 1232 ||||||||||| || || || || ||||||||||| ||||||||||| |||||||| ||| Sbjct: 1043 tctggtcagagctcgacgataaccggaacttatgctggacaatatgtaatgcagggcttt 1102 Query: 1233 ctggatctc 1241 || |||||| Sbjct: 1103 cttgatctc 1111 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Plus Query: 561 gtagttgcgtgcgacattcctgaagtaattggaactgcttttgctttgaacatgctctt 619 |||||||| || ||||| || ||||| || ||||| ||||||||| ||||||||||||| Sbjct: 431 gtagttgcttgtgacataccggaagttatcggaacagcttttgctctgaacatgctctt 489
>gb|AF165125.1|AF165125 Arabidopsis thaliana NRAMP1 protein (NRAMP1) mRNA, complete cds Length = 1775 Score = 77.8 bits (39), Expect = 1e-10 Identities = 126/155 (81%) Strand = Plus / Plus Query: 262 atcagattgttatccctgagaaaaatagctggaagaacttattttcatacatagggcccg 321 |||||||| || || ||||||| || ||||||||||| || ||| | ||| |||| || | Sbjct: 165 atcagattattgtctctgagaagaagagctggaagaatttctttgcttacttaggccctg 224 Query: 322 gttttctcgtctctatcgcctatatcgatcctggcaattttgagacggacctacaggctg 381 ||||||| || || ||||| ||||| |||||||| || |||||||| || || || |||| Sbjct: 225 gttttcttgtttcaatcgcatatattgatcctggaaactttgagactgatctgcaagctg 284 Query: 382 gagcacagtacaaatacgagcttctttggatcata 416 ||||||| ||||| || || | |||||||||||| Sbjct: 285 gagcacactacaagtatgaattactttggatcata 319 Score = 65.9 bits (33), Expect = 5e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 1173 tctggtcagagttctacaattacaggaacttatgcaggacaatatgtcatgcaggggttt 1232 ||||||||||| || || || || ||||||||||| ||||||||||| |||||||| ||| Sbjct: 1076 tctggtcagagctcgacgataaccggaacttatgctggacaatatgtaatgcagggcttt 1135 Query: 1233 ctggatctc 1241 || |||||| Sbjct: 1136 cttgatctc 1144 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Plus Query: 561 gtagttgcgtgcgacattcctgaagtaattggaactgcttttgctttgaacatgctctt 619 |||||||| || ||||| || ||||| || ||||| ||||||||| ||||||||||||| Sbjct: 464 gtagttgcttgtgacataccggaagttatcggaacagcttttgctctgaacatgctctt 522
>gb|AF181687.1|AF181687 Arabidopsis thaliana metal ion transporter (PMIT1) mRNA, complete cds Length = 1839 Score = 77.8 bits (39), Expect = 1e-10 Identities = 126/155 (81%) Strand = Plus / Plus Query: 262 atcagattgttatccctgagaaaaatagctggaagaacttattttcatacatagggcccg 321 |||||||| || || ||||||| || ||||||||||| || ||| | ||| |||| || | Sbjct: 159 atcagattattgtctctgagaagaagagctggaagaatttctttgcttacttaggccctg 218 Query: 322 gttttctcgtctctatcgcctatatcgatcctggcaattttgagacggacctacaggctg 381 ||||||| || || ||||| ||||| |||||||| || |||||||| || || || |||| Sbjct: 219 gttttcttgtttcaatcgcatatattgatcctggaaactttgagactgatctgcaagctg 278 Query: 382 gagcacagtacaaatacgagcttctttggatcata 416 ||||||| ||||| || || | |||||||||||| Sbjct: 279 gagcacactacaagtatgaattactttggatcata 313 Score = 65.9 bits (33), Expect = 5e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 1173 tctggtcagagttctacaattacaggaacttatgcaggacaatatgtcatgcaggggttt 1232 ||||||||||| || || || || ||||||||||| ||||||||||| |||||||| ||| Sbjct: 1070 tctggtcagagctcgacgataaccggaacttatgctggacaatatgtaatgcagggcttt 1129 Query: 1233 ctggatctc 1241 || |||||| Sbjct: 1130 cttgatctc 1138 Score = 54.0 bits (27), Expect = 0.002 Identities = 51/59 (86%) Strand = Plus / Plus Query: 561 gtagttgcgtgcgacattcctgaagtaattggaactgcttttgctttgaacatgctctt 619 |||||||| || ||||| || ||||| || ||||| ||||||||| ||||||||||||| Sbjct: 458 gtagttgcttgtgacataccggaagttatcggaacagcttttgctctgaacatgctctt 516
>ref|NM_101464.3| Arabidopsis thaliana NRAMP6; metal ion transporter (NRAMP6) mRNA, complete cds Length = 2137 Score = 73.8 bits (37), Expect = 2e-09 Identities = 280/361 (77%) Strand = Plus / Plus Query: 262 atcagattgttatccctgagaaaaatagctggaagaacttattttcatacatagggcccg 321 |||||||| || ||||||||||||| |||||||| ||||| || |||||| |||| || | Sbjct: 90 atcagattcttgtccctgagaaaaagagctggaaaaacttcttctcatacttaggccctg 149 Query: 322 gttttctcgtctctatcgcctatatcgatcctggcaattttgagacggacctacaggctg 381 | ||||| ||||| || || || || |||||||| || ||||| || || || || | | Sbjct: 150 gatttcttgtctcaattgcttacattgatcctggaaactttgaaactgatctgcaatcag 209 Query: 382 gagcacagtacaaatacgagcttctttggatcatacttattgcatcatgtgctgcacttg 441 |||| || ||||| || ||| | || ||||||||| | | ||||||||||| || | | Sbjct: 210 gagctcaatacaagtatgagttactctggatcatattggtggcatcatgtgcagctttag 269 Query: 442 taattcaatcgcttgcagccagcctaggtgttgtgactgggaagcatcttgctgagcact 501 | |||||||| || || || | || |||||||| || || ||||| | || ||||| | Sbjct: 270 tgattcaatctctggctgcaaatcttggtgttgtcacaggaaagcacttagcagagcatt 329 Query: 502 gcagggctgaatatcccaaggtcacaaatttcatcttatggattcttgcagaactggctg 561 | || ||||| || ||||||| |||| || || |||||| | |||| ||| | |||| Sbjct: 330 gtagagctgagtactccaaggttccaaactttatgttatgggtagttgctgaaatcgctg 389 Query: 562 tagttgcgtgcgacattcctgaagtaattggaactgcttttgctttgaacatgctcttca 621 |||| || || || ||||| |||||||||||||| || |||||||| |||||||| |||| Sbjct: 390 tagtagcttgtgatattccagaagtaattggaacagcatttgctttaaacatgctattca 449 Query: 622 a 622 | Sbjct: 450 a 450 Score = 60.0 bits (30), Expect = 3e-05 Identities = 81/98 (82%) Strand = Plus / Plus Query: 1137 tggagctcaaaggtgttcgctattgccttgttggcatctggtcagagttctacaattaca 1196 |||||||||||| | || || ||||| ||| | || || ||||||||||| || || || Sbjct: 965 tggagctcaaagctatttgcaattgcgttgcttgcttccggtcagagttcaaccataacc 1024 Query: 1197 ggaacttatgcaggacaatatgtcatgcaggggtttct 1234 ||||| ||||| |||||||| || |||||||||||||| Sbjct: 1025 ggaacatatgctggacaatacgttatgcaggggtttct 1062 Score = 50.1 bits (25), Expect = 0.032 Identities = 37/41 (90%) Strand = Plus / Plus Query: 861 ggtgctatggtgatgccgcacaatctttttcttcactcagc 901 ||||| ||||| |||||||||||||| ||||| |||||||| Sbjct: 689 ggtgccatggttatgccgcacaatctctttctccactcagc 729
>gb|AY263397.1| Arabidopsis thaliana Nramp6b mRNA, complete cds; alternatively spliced Length = 1662 Score = 73.8 bits (37), Expect = 2e-09 Identities = 280/361 (77%) Strand = Plus / Plus Query: 262 atcagattgttatccctgagaaaaatagctggaagaacttattttcatacatagggcccg 321 |||||||| || ||||||||||||| |||||||| ||||| || |||||| |||| || | Sbjct: 74 atcagattcttgtccctgagaaaaagagctggaaaaacttcttctcatacttaggccctg 133 Query: 322 gttttctcgtctctatcgcctatatcgatcctggcaattttgagacggacctacaggctg 381 | ||||| ||||| || || || || |||||||| || ||||| || || || || | | Sbjct: 134 gatttcttgtctcaattgcttacattgatcctggaaactttgaaactgatctgcaatcag 193 Query: 382 gagcacagtacaaatacgagcttctttggatcatacttattgcatcatgtgctgcacttg 441 |||| || ||||| || ||| | || ||||||||| | | ||||||||||| || | | Sbjct: 194 gagctcaatacaagtatgagttactctggatcatattggtggcatcatgtgcagctttag 253 Query: 442 taattcaatcgcttgcagccagcctaggtgttgtgactgggaagcatcttgctgagcact 501 | |||||||| || || || | || |||||||| || || ||||| | || ||||| | Sbjct: 254 tgattcaatctctggctgcaaatcttggtgttgtcacaggaaagcacttagcagagcatt 313 Query: 502 gcagggctgaatatcccaaggtcacaaatttcatcttatggattcttgcagaactggctg 561 | || ||||| || ||||||| |||| || || |||||| | |||| ||| | |||| Sbjct: 314 gtagagctgagtactccaaggttccaaactttatgttatgggtagttgctgaaatcgctg 373 Query: 562 tagttgcgtgcgacattcctgaagtaattggaactgcttttgctttgaacatgctcttca 621 |||| || || || ||||| |||||||||||||| || |||||||| |||||||| |||| Sbjct: 374 tagtagcttgtgatattccagaagtaattggaacagcatttgctttaaacatgctattca 433 Query: 622 a 622 | Sbjct: 434 a 434 Score = 60.0 bits (30), Expect = 3e-05 Identities = 81/98 (82%) Strand = Plus / Plus Query: 1137 tggagctcaaaggtgttcgctattgccttgttggcatctggtcagagttctacaattaca 1196 |||||||||||| | || || ||||| ||| | || || ||||||||||| || || || Sbjct: 1026 tggagctcaaagctatttgcaattgcgttgcttgcttccggtcagagttcaaccataacc 1085 Query: 1197 ggaacttatgcaggacaatatgtcatgcaggggtttct 1234 ||||| ||||| |||||||| || |||||||||||||| Sbjct: 1086 ggaacatatgctggacaatacgttatgcaggggtttct 1123 Score = 50.1 bits (25), Expect = 0.032 Identities = 37/41 (90%) Strand = Plus / Plus Query: 861 ggtgctatggtgatgccgcacaatctttttcttcactcagc 901 ||||| ||||| |||||||||||||| ||||| |||||||| Sbjct: 750 ggtgccatggttatgccgcacaatctctttctccactcagc 790
>emb|AJ291831.1|ATH291831 Arabidopsis thaliana mRNA for putative metal transporter (nramp6 gene) Length = 1584 Score = 73.8 bits (37), Expect = 2e-09 Identities = 280/361 (77%) Strand = Plus / Plus Query: 262 atcagattgttatccctgagaaaaatagctggaagaacttattttcatacatagggcccg 321 |||||||| || ||||||||||||| |||||||| ||||| || |||||| |||| || | Sbjct: 74 atcagattcttgtccctgagaaaaagagctggaaaaacttcttctcatacttaggccctg 133 Query: 322 gttttctcgtctctatcgcctatatcgatcctggcaattttgagacggacctacaggctg 381 | ||||| ||||| || || || || |||||||| || ||||| || || || || | | Sbjct: 134 gatttcttgtctcaattgcttacattgatcctggaaactttgaaactgatctgcaatcag 193 Query: 382 gagcacagtacaaatacgagcttctttggatcatacttattgcatcatgtgctgcacttg 441 |||| || ||||| || ||| | || ||||||||| | | ||||||||||| || | | Sbjct: 194 gagctcaatacaagtatgagttactctggatcatattggtggcatcatgtgcagctttag 253 Query: 442 taattcaatcgcttgcagccagcctaggtgttgtgactgggaagcatcttgctgagcact 501 | |||||||| || || || | || |||||||| || || ||||| | || ||||| | Sbjct: 254 tgattcaatctctggctgcaaatcttggtgttgtcacaggaaagcacttagcagagcatt 313 Query: 502 gcagggctgaatatcccaaggtcacaaatttcatcttatggattcttgcagaactggctg 561 | || ||||| || ||||||| |||| || || |||||| | |||| ||| | |||| Sbjct: 314 gtagagctgagtactccaaggttccaaactttatgttatgggtagttgctgaaatcgctg 373 Query: 562 tagttgcgtgcgacattcctgaagtaattggaactgcttttgctttgaacatgctcttca 621 |||| || || || ||||| |||||||||||||| || |||||||| |||||||| |||| Sbjct: 374 tagtagcttgtgatattccagaagtaattggaacagcatttgctttaaacatgctattca 433 Query: 622 a 622 | Sbjct: 434 a 434 Score = 60.0 bits (30), Expect = 3e-05 Identities = 81/98 (82%) Strand = Plus / Plus Query: 1137 tggagctcaaaggtgttcgctattgccttgttggcatctggtcagagttctacaattaca 1196 |||||||||||| | || || ||||| ||| | || || ||||||||||| || || || Sbjct: 949 tggagctcaaagctatttgcaattgcgttgcttgcttccggtcagagttcaaccataacc 1008 Query: 1197 ggaacttatgcaggacaatatgtcatgcaggggtttct 1234 ||||| ||||| |||||||| || |||||||||||||| Sbjct: 1009 ggaacatatgctggacaatacgttatgcaggggtttct 1046 Score = 50.1 bits (25), Expect = 0.032 Identities = 37/41 (90%) Strand = Plus / Plus Query: 861 ggtgctatggtgatgccgcacaatctttttcttcactcagc 901 ||||| ||||| |||||||||||||| ||||| |||||||| Sbjct: 673 ggtgccatggttatgccgcacaatctctttctccactcagc 713
>gb|AY128347.1| Arabidopsis thaliana metal ion transporter (At1g80830) mRNA, complete cds Length = 1027 Score = 65.9 bits (33), Expect = 5e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 1173 tctggtcagagttctacaattacaggaacttatgcaggacaatatgtcatgcaggggttt 1232 ||||||||||| || || || || ||||||||||| ||||||||||| |||||||| ||| Sbjct: 257 tctggtcagagctcgacgataaccggaacttatgctggacaatatgtaatgcagggcttt 316 Query: 1233 ctggatctc 1241 || |||||| Sbjct: 317 cttgatctc 325
>gb|AC011713.2|F23A5 Arabidopsis thaliana chromosome 1 BAC F23A5 sequence, complete sequence Length = 109694 Score = 65.9 bits (33), Expect = 5e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 1173 tctggtcagagttctacaattacaggaacttatgcaggacaatatgtcatgcaggggttt 1232 ||||||||||| || || || || ||||||||||| ||||||||||| |||||||| ||| Sbjct: 57811 tctggtcagagctcgacgataaccggaacttatgctggacaatatgtaatgcagggcttt 57752 Query: 1233 ctggatctc 1241 || |||||| Sbjct: 57751 cttgatctc 57743 Score = 42.1 bits (21), Expect = 7.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 591 ggaactgcttttgctttgaacatgctctt 619 ||||| ||||||||| ||||||||||||| Sbjct: 58621 ggaacagcttttgctctgaacatgctctt 58593
>gb|AY074865.1| Arabidopsis thaliana At1g15960/T24D18_6 mRNA, complete sequence Length = 2221 Score = 61.9 bits (31), Expect = 9e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 262 atcagattgttatccctgagaaaaatagctggaagaacttattttcatacatagggcccg 321 |||||||| || ||||||||||||| |||||||| ||||| || |||||| |||| || | Sbjct: 123 atcagattcttgtccctgagaaaaagagctggaaaaacttcttctcatacttaggccctg 182 Query: 322 gttttctcgtctctatcgcctatatcgatcctggcaattttga 364 | ||||| ||||| || || || || |||||||| || ||||| Sbjct: 183 gatttcttgtctcaattgcttacattgatcctggaaactttga 225 Score = 60.0 bits (30), Expect = 3e-05 Identities = 81/98 (82%) Strand = Plus / Plus Query: 1137 tggagctcaaaggtgttcgctattgccttgttggcatctggtcagagttctacaattaca 1196 |||||||||||| | || || ||||| ||| | || || ||||||||||| || || || Sbjct: 1032 tggagctcaaagctatttgcaattgcgttgcttgcttccggtcagagttcaaccataacc 1091 Query: 1197 ggaacttatgcaggacaatatgtcatgcaggggtttct 1234 ||||| ||||| |||||||| || |||||||||||||| Sbjct: 1092 ggaacatatgctggacaatacgttatgcaggggtttct 1129 Score = 50.1 bits (25), Expect = 0.032 Identities = 37/41 (90%) Strand = Plus / Plus Query: 861 ggtgctatggtgatgccgcacaatctttttcttcactcagc 901 ||||| ||||| |||||||||||||| ||||| |||||||| Sbjct: 756 ggtgccatggttatgccgcacaatctctttctccactcagc 796 Score = 44.1 bits (22), Expect = 2.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 585 gtaattggaactgcttttgctttgaacatgctcttcaa 622 ||||||||||| || |||||||| |||||||| ||||| Sbjct: 403 gtaattggaacagcatttgctttaaacatgctattcaa 440
>gb|BT020428.1| Arabidopsis thaliana At1g15960 mRNA, complete cds Length = 906 Score = 60.0 bits (30), Expect = 3e-05 Identities = 81/98 (82%) Strand = Plus / Plus Query: 1137 tggagctcaaaggtgttcgctattgccttgttggcatctggtcagagttctacaattaca 1196 |||||||||||| | || || ||||| ||| | || || ||||||||||| || || || Sbjct: 271 tggagctcaaagctatttgcaattgcgttgcttgcttccggtcagagttcaaccataacc 330 Query: 1197 ggaacttatgcaggacaatatgtcatgcaggggtttct 1234 ||||| ||||| |||||||| || |||||||||||||| Sbjct: 331 ggaacatatgctggacaatacgttatgcaggggtttct 368 Score = 46.1 bits (23), Expect = 0.51 Identities = 32/35 (91%) Strand = Plus / Plus Query: 867 atggtgatgccgcacaatctttttcttcactcagc 901 ||||| |||||||||||||| ||||| |||||||| Sbjct: 1 atggttatgccgcacaatctctttctccactcagc 35
>gb|AC140916.17| Medicago truncatula clone mth2-12b2, complete sequence Length = 133358 Score = 52.0 bits (26), Expect = 0.008 Identities = 41/46 (89%) Strand = Plus / Minus Query: 1182 agttctacaattacaggaacttatgcaggacaatatgtcatgcagg 1227 |||||||| || |||||||||||||||||||| || ||||||||| Sbjct: 108782 agttctaccatcacaggaacttatgcaggacagtacatcatgcagg 108737
>gb|AY724413.1| Malus baccata root-specific metal transporter (Nramp1) mRNA, complete cds Length = 2090 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Plus Query: 1191 attacaggaacttatgcaggacaatatgtcatgcaggg 1228 |||||||| ||||| |||||||||| |||||||||||| Sbjct: 1136 attacaggcacttacgcaggacaatttgtcatgcaggg 1173 Score = 50.1 bits (25), Expect = 0.032 Identities = 28/29 (96%) Strand = Plus / Plus Query: 873 atgccgcacaatctttttcttcactcagc 901 |||||||||||||||||||| |||||||| Sbjct: 818 atgccgcacaatctttttctccactcagc 846 Score = 46.1 bits (23), Expect = 0.51 Identities = 56/67 (83%) Strand = Plus / Plus Query: 1344 attatcactgcttcgatgatactgtcattcgaacttccttttgctctagtaccactcctt 1403 ||||||| ||| ||||||||||| || || || || || ||||||||| | |||||||| Sbjct: 1289 attatcattgcctcgatgatactatcttttgagctcccatttgctctaattccactcctc 1348 Query: 1404 aaattca 1410 ||||||| Sbjct: 1349 aaattca 1355
>ref|NM_001065850.1| Oryza sativa (japonica cultivar-group) Os07g0258400 (Os07g0258400) mRNA, complete cds Length = 1952 Score = 50.1 bits (25), Expect = 0.032 Identities = 55/65 (84%) Strand = Plus / Plus Query: 1167 ttggcatctggtcagagttctacaattacaggaacttatgcaggacaatatgtcatgcag 1226 ||||| ||||| ||||| || || ||||| || |||||||| || |||||||| |||||| Sbjct: 1025 ttggcttctggacagagctcgaccattactggcacttatgctgggcaatatgttatgcag 1084 Query: 1227 gggtt 1231 ||||| Sbjct: 1085 gggtt 1089
>gb|DQ431468.1| Oryza sativa (japonica cultivar-group) metal transporter (Nramp1) mRNA, complete cds Length = 1557 Score = 50.1 bits (25), Expect = 0.032 Identities = 55/65 (84%) Strand = Plus / Plus Query: 1167 ttggcatctggtcagagttctacaattacaggaacttatgcaggacaatatgtcatgcag 1226 ||||| ||||| ||||| || || ||||| || |||||||| || |||||||| |||||| Sbjct: 970 ttggcttctggacagagctcgaccattactggcacttatgctgggcaatatgttatgcag 1029 Query: 1227 gggtt 1231 ||||| Sbjct: 1030 gggtt 1034
>gb|L41217.1|RICNRAMP Oryza Sativa integral membrane protein (OsNramp) mRNA Length = 1987 Score = 50.1 bits (25), Expect = 0.032 Identities = 55/65 (84%) Strand = Plus / Plus Query: 1167 ttggcatctggtcagagttctacaattacaggaacttatgcaggacaatatgtcatgcag 1226 ||||| ||||| ||||| || || ||||| || |||||||| || |||||||| |||||| Sbjct: 1049 ttggcttctggacagagctcgaccattactggcacttatgctgggcaatatgttatgcag 1108 Query: 1227 gggtt 1231 ||||| Sbjct: 1109 gggtt 1113
>gb|S81897.1| OsNramp1=Nramp1 homolog/Bcg product homolog [Oryza sativa, indica, cv. IR 36, etiolated shoots, mRNA, 1967 nt] Length = 1967 Score = 50.1 bits (25), Expect = 0.032 Identities = 55/65 (84%) Strand = Plus / Plus Query: 1167 ttggcatctggtcagagttctacaattacaggaacttatgcaggacaatatgtcatgcag 1226 ||||| ||||| ||||| || || ||||| || |||||||| || |||||||| |||||| Sbjct: 1029 ttggcttctggacagagctcgaccattactggcacttatgctgggcaatatgttatgcag 1088 Query: 1227 gggtt 1231 ||||| Sbjct: 1089 gggtt 1093
>dbj|AK121534.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031A07, full insert sequence Length = 2083 Score = 50.1 bits (25), Expect = 0.032 Identities = 55/65 (84%) Strand = Plus / Plus Query: 1167 ttggcatctggtcagagttctacaattacaggaacttatgcaggacaatatgtcatgcag 1226 ||||| ||||| ||||| || || ||||| || |||||||| || |||||||| |||||| Sbjct: 1055 ttggcttctggacagagctcgaccattactggcacttatgctgggcaatatgttatgcag 1114 Query: 1227 gggtt 1231 ||||| Sbjct: 1115 gggtt 1119
>dbj|AK103557.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132H19, full insert sequence Length = 1358 Score = 50.1 bits (25), Expect = 0.032 Identities = 55/65 (84%) Strand = Plus / Plus Query: 1167 ttggcatctggtcagagttctacaattacaggaacttatgcaggacaatatgtcatgcag 1226 ||||| ||||| ||||| || || ||||| || |||||||| || |||||||| |||||| Sbjct: 566 ttggcttctggacagagctcgaccattactggcacttatgctgggcaatatgttatgcag 625 Query: 1227 gggtt 1231 ||||| Sbjct: 626 gggtt 630
>gb|AC010924.2|T24D18 Arabidopsis thaliana chromosome 1 BAC T24D18 sequence, complete sequence Length = 80442 Score = 46.1 bits (23), Expect = 0.51 Identities = 74/91 (81%) Strand = Plus / Minus Query: 1137 tggagctcaaaggtgttcgctattgccttgttggcatctggtcagagttctacaattaca 1196 |||||||||||| | || || ||||| ||| | || || ||||||||||| || || || Sbjct: 18337 tggagctcaaagctatttgcaattgcgttgcttgcttccggtcagagttcaaccataacc 18278 Query: 1197 ggaacttatgcaggacaatatgtcatgcagg 1227 ||||| ||||| |||||||| || ||||||| Sbjct: 18277 ggaacatatgctggacaatacgttatgcagg 18247 Score = 46.1 bits (23), Expect = 0.51 Identities = 35/39 (89%) Strand = Plus / Minus Query: 584 agtaattggaactgcttttgctttgaacatgctcttcaa 622 |||||||||||| || |||||||| |||||||| ||||| Sbjct: 19209 agtaattggaacagcatttgctttaaacatgctattcaa 19171
>emb|AL929417.11| Mouse DNA sequence from clone RP23-25M5 on chromosome 2, complete sequence Length = 215389 Score = 46.1 bits (23), Expect = 0.51 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1404 aaattcaccagtagcaaaacaaa 1426 ||||||||||||||||||||||| Sbjct: 139392 aaattcaccagtagcaaaacaaa 139370
>emb|CT832446.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA230P12, full insert sequence Length = 2281 Score = 44.1 bits (22), Expect = 2.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1353 gcttcgatgatactgtcattcgaacttccttttgctct 1390 ||||||||||||||||| ||||| || || |||||||| Sbjct: 1552 gcttcgatgatactgtccttcgagctgccgtttgctct 1589
>ref|NM_001065847.1| Oryza sativa (japonica cultivar-group) Os07g0257200 (Os07g0257200) mRNA, complete cds Length = 2006 Score = 44.1 bits (22), Expect = 2.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1353 gcttcgatgatactgtcattcgaacttccttttgctct 1390 ||||||||||||||||| ||||| || || |||||||| Sbjct: 1279 gcttcgatgatactgtccttcgagctgccgtttgctct 1316
>ref|XR_014954.1| PREDICTED: Apis mellifera similar to Malvolio CG3671-PA, isoform A (LOC727033), mRNA Length = 1061 Score = 44.1 bits (22), Expect = 2.0 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1174 ctggtcagagttctacaattacaggaacttatgcaggacaat 1215 |||||||| ||| ||||| |||||||| ||||||||||||| Sbjct: 317 ctggtcagtcttccacaatgacaggaacgtatgcaggacaat 358
>gb|AC124538.4| Mus musculus BAC clone RP23-338P10 from chromosome 1, complete sequence Length = 181512 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1288 ttgtgcctagtcttattgtgtc 1309 |||||||||||||||||||||| Sbjct: 116741 ttgtgcctagtcttattgtgtc 116762
>dbj|AK070788.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064O13, full insert sequence Length = 2009 Score = 44.1 bits (22), Expect = 2.0 Identities = 34/38 (89%) Strand = Plus / Plus Query: 1353 gcttcgatgatactgtcattcgaacttccttttgctct 1390 ||||||||||||||||| ||||| || || |||||||| Sbjct: 1280 gcttcgatgatactgtccttcgagctgccgtttgctct 1317
>gb|AC187005.11| Canis Familiaris chromosome 16, clone XX-444B7, complete sequence Length = 196922 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1293 cctagtcttattgtgtcacta 1313 ||||||||||||||||||||| Sbjct: 81913 cctagtcttattgtgtcacta 81933
>gb|AC102612.14| Mus musculus chromosome 9, clone RP23-417D20, complete sequence Length = 202804 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1286 aattgtgcctagtcttattgt 1306 ||||||||||||||||||||| Sbjct: 47033 aattgtgcctagtcttattgt 47053
>ref|NM_201384.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 11, mRNA gb|AY480051.1| Homo sapiens plectin 11 mRNA, complete cds Length = 14797 Score = 42.1 bits (21), Expect = 7.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 810 gttcctgaaattaaaggagatggagctac 838 ||||||||| || |||||||||||||||| Sbjct: 1089 gttcctgaagtttaaggagatggagctac 1117
>ref|NM_201383.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 10, mRNA gb|AY480050.1| Homo sapiens plectin 10 mRNA, complete cds Length = 14689 Score = 42.1 bits (21), Expect = 7.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 810 gttcctgaaattaaaggagatggagctac 838 ||||||||| || |||||||||||||||| Sbjct: 981 gttcctgaagtttaaggagatggagctac 1009
>ref|NM_201382.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 8, mRNA gb|AY480049.1| Homo sapiens plectin 8 mRNA, complete cds Length = 14675 Score = 42.1 bits (21), Expect = 7.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 810 gttcctgaaattaaaggagatggagctac 838 ||||||||| || |||||||||||||||| Sbjct: 967 gttcctgaagtttaaggagatggagctac 995
>ref|NM_201381.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 7, mRNA gb|AY480048.1| Homo sapiens plectin 7 mRNA, complete cds Length = 14646 Score = 42.1 bits (21), Expect = 7.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 810 gttcctgaaattaaaggagatggagctac 838 ||||||||| || |||||||||||||||| Sbjct: 938 gttcctgaagtttaaggagatggagctac 966
>gb|AY480047.1| Homo sapiens plectin 6 mRNA, complete cds Length = 15249 Score = 42.1 bits (21), Expect = 7.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 810 gttcctgaaattaaaggagatggagctac 838 ||||||||| || |||||||||||||||| Sbjct: 1541 gttcctgaagtttaaggagatggagctac 1569
>ref|NM_201379.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 3, mRNA gb|AY480046.1| Homo sapiens plectin 3 mRNA, complete cds Length = 14751 Score = 42.1 bits (21), Expect = 7.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 810 gttcctgaaattaaaggagatggagctac 838 ||||||||| || |||||||||||||||| Sbjct: 1043 gttcctgaagtttaaggagatggagctac 1071
>ref|NM_201378.1| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 2, mRNA gb|AY480045.1| Homo sapiens plectin 2 mRNA, complete cds Length = 14626 Score = 42.1 bits (21), Expect = 7.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 810 gttcctgaaattaaaggagatggagctac 838 ||||||||| || |||||||||||||||| Sbjct: 918 gttcctgaagtttaaggagatggagctac 946
>ref|NM_000445.2| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 1, mRNA gb|AY480044.1| Homo sapiens plectin 1 mRNA, complete cds Length = 14755 Score = 42.1 bits (21), Expect = 7.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 810 gttcctgaaattaaaggagatggagctac 838 ||||||||| || |||||||||||||||| Sbjct: 1047 gttcctgaagtttaaggagatggagctac 1075
>gb|AC123029.3| Mus musculus BAC clone RP24-571B18 from chromosome 8, complete sequence Length = 154235 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 547 ttgcagaactggctgtagttg 567 ||||||||||||||||||||| Sbjct: 45542 ttgcagaactggctgtagttg 45562
>gb|AC139029.10| Mus musculus chromosome 14, clone RP23-393A18, complete sequence Length = 204943 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1632 gtcttcaggaagaacaggaag 1652 ||||||||||||||||||||| Sbjct: 141737 gtcttcaggaagaacaggaag 141717
>ref|XM_547329.2| PREDICTED: Canis familiaris similar to CTL2 gene (LOC490208), mRNA Length = 2130 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 545 tcttgcagaactggctgtagt 565 ||||||||||||||||||||| Sbjct: 418 tcttgcagaactggctgtagt 398
>gb|AC109542.6| Rattus norvegicus 1 BAC CH230-270O15 (Children's Hospital Oakland Research Institute) complete sequence Length = 246913 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 791 agttgtgcgaggcctttttgt 811 ||||||||||||||||||||| Sbjct: 197272 agttgtgcgaggcctttttgt 197252
>ref|XM_941911.1| PREDICTED: Homo sapiens similar to Plectin-1 (PLTN) (PCN) (Hemidesmosomal protein 1) (HD1) (LOC652460), mRNA Length = 3771 Score = 42.1 bits (21), Expect = 7.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 810 gttcctgaaattaaaggagatggagctac 838 ||||||||| || |||||||||||||||| Sbjct: 1359 gttcctgaagtttaaggagatggagctac 1387
>gb|AC109322.16| Homo sapiens chromosome 8, clone CTD-3065J16, complete sequence Length = 215342 Score = 42.1 bits (21), Expect = 7.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 810 gttcctgaaattaaaggagatggagctac 838 ||||||||| || |||||||||||||||| Sbjct: 137179 gttcctgaagtttaaggagatggagctac 137207
>dbj|AK134074.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830430D20 product:unclassifiable, full insert sequence Length = 2214 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 547 ttgcagaactggctgtagttg 567 ||||||||||||||||||||| Sbjct: 2060 ttgcagaactggctgtagttg 2080
>dbj|AK019856.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932443L11 product:hypothetical protein, full insert sequence Length = 2823 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 547 ttgcagaactggctgtagttg 567 ||||||||||||||||||||| Sbjct: 1867 ttgcagaactggctgtagttg 1847
>emb|AL671309.6| Human DNA sequence from clone RP11-409O11 on chromosome 9 Contains the 5' UTR of the TMEM2 gene for transmembrane protein 2, the 3' end of a novel gene (CGI-67) and a CpG island, complete sequence Length = 117976 Score = 42.1 bits (21), Expect = 7.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1005 atcaacatatctatcatatctgtca 1029 ||||||||||||||||||| ||||| Sbjct: 21134 atcaacatatctatcatatatgtca 21110
>emb|AL441928.12| Human DNA sequence from clone RP11-509A6 on chromosome 9, complete sequence Length = 72593 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 805 tttttgttcctgaaattaaag 825 ||||||||||||||||||||| Sbjct: 42124 tttttgttcctgaaattaaag 42104
>gb|U53204.1|HSU53204 Human plectin (PLEC1) mRNA, complete cds Length = 14800 Score = 42.1 bits (21), Expect = 7.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 810 gttcctgaaattaaaggagatggagctac 838 ||||||||| || |||||||||||||||| Sbjct: 1092 gttcctgaagtttaaggagatggagctac 1120
>gb|U63610.1|HSPLEC1S3 Human plectin (PLEC1) gene, exons 3-32, and complete cds Length = 22693 Score = 42.1 bits (21), Expect = 7.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 810 gttcctgaaattaaaggagatggagctac 838 ||||||||| || |||||||||||||||| Sbjct: 3069 gttcctgaagtttaaggagatggagctac 3097
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome Length = 3503610 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 617 cttcaaaattccaatatggtg 637 ||||||||||||||||||||| Sbjct: 2162741 cttcaaaattccaatatggtg 2162761
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 42.1 bits (21), Expect = 7.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 861 ggtgctatggtgatgccgcacaatctttt 889 |||||| |||||||||| ||||||||||| Sbjct: 3011489 ggtgctgtggtgatgcctcacaatctttt 3011461
>emb|BX649298.7| Zebrafish DNA sequence from clone DKEY-12H2 in linkage group 20, complete sequence Length = 122662 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1437 cacacaaattcaagatttatt 1457 ||||||||||||||||||||| Sbjct: 81859 cacacaaattcaagatttatt 81879
>gb|AC092126.3| Homo sapiens chromosome 16 clone RP11-1114G22, complete sequence Length = 148883 Score = 42.1 bits (21), Expect = 7.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 807 tttgttcctgaaattaaaggagatg 831 |||||| |||||||||||||||||| Sbjct: 98155 tttgtttctgaaattaaaggagatg 98131
>gb|AC018846.5| Homo sapiens chromosome 16 clone RP11-370P15, complete sequence Length = 175519 Score = 42.1 bits (21), Expect = 7.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 807 tttgttcctgaaattaaaggagatg 831 |||||| |||||||||||||||||| Sbjct: 13718 tttgtttctgaaattaaaggagatg 13694
>emb|Z54367.1|HSPLECTIN H.sapiens gene for plectin Length = 14189 Score = 42.1 bits (21), Expect = 7.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 810 gttcctgaaattaaaggagatggagctac 838 ||||||||| || |||||||||||||||| Sbjct: 1371 gttcctgaagtttaaggagatggagctac 1399
>emb|AL670884.7| Mouse DNA sequence from clone RP23-372M15 on chromosome 4, complete sequence Length = 143363 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1480 gctccttcatcatggtcatca 1500 ||||||||||||||||||||| Sbjct: 109350 gctccttcatcatggtcatca 109370
>dbj|AP003383.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-21G19, complete sequences Length = 157533 Score = 42.1 bits (21), Expect = 7.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 359 ttttgagacggacctacaggctggagcacagta 391 ||||||||| || || ||||||||||||||||| Sbjct: 114247 ttttgagacagagctccaggctggagcacagta 114279
>ref|NM_201380.2| Homo sapiens plectin 1, intermediate filament binding protein 500kDa (PLEC1), transcript variant 6, mRNA Length = 15249 Score = 42.1 bits (21), Expect = 7.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 810 gttcctgaaattaaaggagatggagctac 838 ||||||||| || |||||||||||||||| Sbjct: 1541 gttcctgaagtttaaggagatggagctac 1569
>emb|X55153.1|RRRP2G R.rattus RP2 gene for ribosomal protein P2 Length = 2812 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 791 agttgtgcgaggcctttttgt 811 ||||||||||||||||||||| Sbjct: 1758 agttgtgcgaggcctttttgt 1778
>emb|AL670319.4| Mouse DNA sequence from clone RP23-315E18 on chromosome 4, complete sequence Length = 40107 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1510 tcctgataacaagcttcgtca 1530 ||||||||||||||||||||| Sbjct: 34636 tcctgataacaagcttcgtca 34656 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 366,045,591 Number of extensions: 18899615 Number of successful extensions: 100138 Number of sequences better than 10.0: 67 Number of HSP's gapped: 100129 Number of HSP's successfully gapped: 130 Length of query: 2066 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2043 Effective length of database: 18,503,978,556 Effective search space: 37803628189908 Effective search space used: 37803628189908 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
