ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf98h16 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001059082.1| Oryza sativa (japonica cultivar-group) Os04g0358000 (Os04g0358000) mRNA, complete cds Length = 999 Score = 163 bits (82), Expect = 2e-36 Identities = 277/342 (80%) Strand = Plus / Plus Query: 156 ccggtgggaggccagccagcatgcgagccgtccagtacagtggctacggtggcggcagcg 215 |||| |||||||| |||| |||||| |||||||||||| | |||||||| |||||| || Sbjct: 8 ccggcgggaggccggccaccatgcgtgccgtccagtacggcggctacggcggcggcgccg 67 Query: 216 ctgccctcaagtatgtggagatccctgttccatcactgaagaaaggtgaagttcttataa 275 | |||| |||| |||||| ||||||||||| ||||| ||||| |||| |||| |||| Sbjct: 68 ccacccttaagtttgtggaaatccctgttccttcactcaagaagaatgaaattctcataa 127 Query: 276 aagttgaagcagcaagcatcaatccagccgattgccggatacagaaaggactgctacgtc 335 || | |||||||||||| |||| | ||| ||||| |||| ||||||||| || | || | Sbjct: 128 aaatagaagcagcaagcctcaaccaagctgattggaggattcagaaaggattgatgcgcc 187 Query: 336 cttttgtcccgaagtttccatttattccagtaaccgacgttgctggagagatcgttgagg 395 | ||| ||| || || |||||||| |||||||| || ||| |||| ||| || |||||| Sbjct: 188 cgtttcacccaaaattcccatttatcccagtaacggatgtttctggggaggtcattgagg 247 Query: 396 ttggttctgcggttcaagagttcaaagttggcgacagagttgtttcgaagttgatattct 455 |||| |||||| |||| |||||||||||||| |||| |||||| || || | | ||| Sbjct: 248 ttggctctgcgattcacgagttcaaagttggtgacaaagttgtctccaaacttaacctct 307 Query: 456 ggaaagctggtggcctcgcagagtacgtagcggcatccgaga 497 ||||||| || ||||| ||||||||||| |||||||| |||| Sbjct: 308 ggaaagcaggaggcctggcagagtacgtggcggcatcggaga 349 Score = 131 bits (66), Expect = 7e-27 Identities = 264/330 (80%) Strand = Plus / Plus Query: 542 gcagggcttcccgtggccggcctgacggcgcttcaggccgtgagggccattggcaccaag 601 |||||||||||||| |||||||||||||| || ||||| |||| |||| ||||||||| Sbjct: 394 gcagggcttcccgtcgccggcctgacggctctccaggcgctgagctccatcggcaccaag 453 Query: 602 ttcgacggcacgggcgtcggcagcaacatcctgatcaccgctgcgtccggcggtatcggc 661 ||||| ||| ||||| |||| | || | ||||||||||| || ||| ||||| ||||| Sbjct: 454 ttcgatggctcgggcaccggcgccgacgtgctgatcaccgcggcctccagcggtgtcggc 513 Query: 662 tcgtacgccgtccagctcgctaagctcgggaaccacaacgtcacggccacctgcggcgcg 721 |||||||||||||||| || |||||||| |||||| |||||| |||| |||||||| Sbjct: 514 acgtacgccgtccagctggccaagctcggcaaccaccgcgtcaccaccacgtgcggcgca 573 Query: 722 cgaaacctggagcttgccgcgaacatcggcgccgacgaggcgctcgactacaagaccacg 781 || || ||||| || | || | | ||||||||||||||| ||||||||| ||| || Sbjct: 574 cgcaatctggacctcgtcggcagcctcggcgccgacgaggtcctcgactacgccaccccg 633 Query: 782 gaaggcgcggcactgaagaactcttccggcaagaagtacgactacatcgtcaacaccacg 841 || || || || || || | | ||||| | |||||||||||||||| ||||| ||| Sbjct: 634 gagggggccgcgctcgcgagcccctccggtaggaagtacgactacatcatcaacctcacc 693 Query: 842 aacggcggcaagtggtcggcgttcaagccg 871 || ||||||||||||||| ||||| |||| Sbjct: 694 gaccgcggcaagtggtcggtgttcaggccg 723 Score = 95.6 bits (48), Expect = 4e-16 Identities = 111/132 (84%) Strand = Plus / Plus Query: 1003 gtttctgcttgagctggtgaaggaaaggaagctcaagacagtcgtcgactcgcgccatcc 1062 |||||| || |||||| ||| |||| ||||||||||||| || ||||||||||| ||||| Sbjct: 861 gtttctcctcgagctgatgagggaagggaagctcaagacggtggtcgactcgcggcatcc 920 Query: 1063 attcgagaaggcagcagatgcgtgggaaaagagcttgagtggccatgcaacggggaaggt 1122 ||||||||||| || || |||||||| | |||| |||| ||||| || || |||||||| Sbjct: 921 gttcgagaaggccgcggaggcgtgggagaggagcatgagcggccacgccaccgggaaggt 980 Query: 1123 catagttgagat 1134 ||| || ||||| Sbjct: 981 catcgtggagat 992
>emb|CR855127.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0113I06, complete sequence Length = 87500 Score = 161 bits (81), Expect = 8e-36 Identities = 305/380 (80%), Gaps = 6/380 (1%) Strand = Plus / Plus Query: 551 cccgtggccggcctgacggcgcttcaggccgtgagggccattggcaccaagttcgacggc 610 ||||| ||||||||||| ||||| ||||| | | |||||| |||||||||||||||||| Sbjct: 2612 cccgtcgccggcctgacagcgctccaggcgctcaaggccatcggcaccaagttcgacggc 2671 Query: 611 acggg------cgtcggcagcaacatcctgatcaccgctgcgtccggcggtatcggctcg 664 |||| || |||| | || | ||||||||||| || ||| |||| | ||| || Sbjct: 2672 tcgggcaccagcggcggcgccgacgttctgatcaccgcggcctccagcggcgtgggcacg 2731 Query: 665 tacgccgtccagctcgctaagctcgggaaccacaacgtcacggccacctgcggcgcgcga 724 ||||||||||||||||| |||||||| |||||| |||||| ||||| ||||||||||| Sbjct: 2732 tacgccgtccagctcgccaagctcggcaaccaccgcgtcaccgccacatgcggcgcgcgc 2791 Query: 725 aacctggagcttgccgcgaacatcggcgccgacgaggcgctcgactacaagaccacggaa 784 ||||| | || | ||| | ||||||||||||||| ||||||||||||||| |||| Sbjct: 2792 aacctcggcctcgtcgctggcctcggcgccgacgaggtcctcgactacaagaccccggag 2851 Query: 785 ggcgcggcactgaagaactcttccggcaagaagtacgactacatcgtcaacaccacgaac 844 || || || ||| || | | ||||||||||||||||||||||||||||||| || ||| Sbjct: 2852 ggggccgcgctgtcgagcccctccggcaagaagtacgactacatcgtcaacatcagtaac 2911 Query: 845 ggcggcaagtggtcggcgttcaagccgagtctcagcagccacggcagagtcatcgacgta 904 ||||||||||| |||||||||| | || |||||||| ||||| ||| ||||||| Sbjct: 2912 aagaacaagtggtcggtgttcaagccgcgcctgagcagccatggcagggtcgtcgacgtc 2971 Query: 905 gctcccaactttgggaactt 924 || |||||||| || ||||| Sbjct: 2972 gcccccaacttcggcaactt 2991 Score = 105 bits (53), Expect = 4e-19 Identities = 174/211 (82%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 632 ctgatcaccgctgcgtccggcggtatcggctcgtacgccgtccagctcgctaagctcggg 691 |||||||||||||| |||||||| ||||| | ||||||||||||||||| |||||||| Sbjct: 22703 ctgatcaccgctgcctccggcggcgtcggcacctacgccgtccagctcgccaagctcggc 22762 Query: 692 aaccacaacgtcacggccacctgcggcgcgcgaaacctggagcttg-ccgcgaacatcgg 750 |||||| |||||| |||||||||||||| || ||| |||| || | |||| | |||| Sbjct: 22763 aaccaccgcgtcaccgccacctgcggcgcccgcaacatggacctcgtccgc-tccctcgg 22821 Query: 751 cgccgacgaggcgctcgactacaagaccacggaaggcgcggcactgaagaact---cttc 807 ||||||||||| ||||||||||| ||| | ||||||| || |||| || || | || Sbjct: 22822 cgccgacgaggtcctcgactacaataccccccaaggcgccgccctgacgagctcggcctc 22881 Query: 808 cggcaagaagtacgactacatcgtcaacacc 838 || | ||||||||||||||||| |||||||| Sbjct: 22882 cgacgagaagtacgactacatcatcaacacc 22912 Score = 75.8 bits (38), Expect = 3e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 1029 ggaagctcaagacagtcgtcgactcgcgccatccattcgagaaggcagcagatgcgtggg 1088 ||||||||| ||| || ||||||||||| ||| ||||||||||| || || ||||||| Sbjct: 23106 ggaagctcaggacggtggtcgactcgcggtgtccgttcgagaaggcggcggaggcgtggg 23165 Query: 1089 aaaagagcttgagtggccatgcaacggggaaggtcatagttgagatgtga 1138 | |||||| || | |||||||| ||||| |||||||| || ||||||||| Sbjct: 23166 agaagagcatgggcggccatgccacgggtaaggtcatcgtggagatgtga 23215 Score = 63.9 bits (32), Expect = 1e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 175 catgcgagccgtccagtacagtggctacggtggcggcagcgctgccct 222 |||||| ||||||||||||||||||||||| |||||| ||||||||| Sbjct: 171 catgcgcgccgtccagtacagtggctacggcggcggcgccgctgccct 218 Score = 63.9 bits (32), Expect = 1e-06 Identities = 107/132 (81%) Strand = Plus / Plus Query: 1007 ctgcttgagctggtgaaggaaaggaagctcaagacagtcgtcgactcgcgccatccattc 1066 ||||| |||||| || |||| ||||||||| ||| || ||||||||||| ||||| ||| Sbjct: 3077 ctgctcgagctgatgcgggaagggaagctcaggacggtggtcgactcgcggcatccgttc 3136 Query: 1067 gagaaggcagcagatgcgtgggaaaagagcttgagtggccatgcaacggggaaggtcata 1126 |||||||| || || || |||| | |||| | || |||||||| || || |||||||| Sbjct: 3137 gagaaggcggcggacgcatgggcgaggagcctcagcggccatgccactggaaaggtcatc 3196 Query: 1127 gttgagatgtga 1138 || ||||||||| Sbjct: 3197 gtggagatgtga 3208 Score = 56.0 bits (28), Expect = 3e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 229 tgtggagatccctgttccatcactgaagaaaggtgaagttcttataaaagttgaagcagc 288 |||||| ||||||||||| || ||||||| | |||||||| ||||||| ||||| || Sbjct: 419 tgtggaaatccctgttccttctgtgaagaaggacgaagttctcgtaaaagtagaagctgc 478 Query: 289 aagcatcaatccagccgatt 308 ||||||||||| | |||||| Sbjct: 479 aagcatcaatcaatccgatt 498 Score = 56.0 bits (28), Expect = 3e-04 Identities = 109/136 (80%) Strand = Plus / Plus Query: 230 gtggagatccctgttccatcactgaagaaaggtgaagttcttataaaagttgaagcagca 289 ||||| ||||||||||| || |||||||| |||||||||||| ||||| ||||| ||| Sbjct: 21644 gtggaaatccctgttccttcggtgaagaaacatgaagttcttattaaagtcgaagctgca 21703 Query: 290 agcatcaatccagccgattgccggatacagaaaggactgctacgtccttttgtcccgaag 349 ||| | || || ||||| | || |||||||| ||||||| || ||| | || ||| Sbjct: 21704 agcgttaacccgattgattggagtattcagaaagggatgctacgcccatttcttcccaag 21763 Query: 350 tttccatttattccag 365 |||||||||||||||| Sbjct: 21764 tttccatttattccag 21779 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 380 ggagagatcgttgaggttggttctgcggttcaagagttcaaagttgg 426 |||||||||||||||||||| ||||| || | |||||||||||||| Sbjct: 659 ggagagatcgttgaggttggctctgcagtacgcgagttcaaagttgg 705 Score = 42.1 bits (21), Expect = 4.8 Identities = 66/81 (81%) Strand = Plus / Plus Query: 1058 catccattcgagaaggcagcagatgcgtgggaaaagagcttgagtggccatgcaacgggg 1117 |||||||||||| |||| || || ||||||| |||||| |||| |||||||| || Sbjct: 19202 catccattcgaggaggcggcggagccgtgggagaagagcaccggtggtcatgcaacacgg 19261 Query: 1118 aaggtcatagttgagatgtga 1138 |||||||| || ||||||||| Sbjct: 19262 aaggtcattgtggagatgtga 19282
>emb|CR855088.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0104J13, complete sequence Length = 82577 Score = 161 bits (81), Expect = 8e-36 Identities = 305/380 (80%), Gaps = 6/380 (1%) Strand = Plus / Plus Query: 551 cccgtggccggcctgacggcgcttcaggccgtgagggccattggcaccaagttcgacggc 610 ||||| ||||||||||| ||||| ||||| | | |||||| |||||||||||||||||| Sbjct: 75703 cccgtcgccggcctgacagcgctccaggcgctcaaggccatcggcaccaagttcgacggc 75762 Query: 611 acggg------cgtcggcagcaacatcctgatcaccgctgcgtccggcggtatcggctcg 664 |||| || |||| | || | ||||||||||| || ||| |||| | ||| || Sbjct: 75763 tcgggcaccagcggcggcgccgacgttctgatcaccgcggcctccagcggcgtgggcacg 75822 Query: 665 tacgccgtccagctcgctaagctcgggaaccacaacgtcacggccacctgcggcgcgcga 724 ||||||||||||||||| |||||||| |||||| |||||| ||||| ||||||||||| Sbjct: 75823 tacgccgtccagctcgccaagctcggcaaccaccgcgtcaccgccacatgcggcgcgcgc 75882 Query: 725 aacctggagcttgccgcgaacatcggcgccgacgaggcgctcgactacaagaccacggaa 784 ||||| | || | ||| | ||||||||||||||| ||||||||||||||| |||| Sbjct: 75883 aacctcggcctcgtcgctggcctcggcgccgacgaggtcctcgactacaagaccccggag 75942 Query: 785 ggcgcggcactgaagaactcttccggcaagaagtacgactacatcgtcaacaccacgaac 844 || || || ||| || | | ||||||||||||||||||||||||||||||| || ||| Sbjct: 75943 ggggccgcgctgtcgagcccctccggcaagaagtacgactacatcgtcaacatcagtaac 76002 Query: 845 ggcggcaagtggtcggcgttcaagccgagtctcagcagccacggcagagtcatcgacgta 904 ||||||||||| |||||||||| | || |||||||| ||||| ||| ||||||| Sbjct: 76003 aagaacaagtggtcggtgttcaagccgcgcctgagcagccatggcagggtcgtcgacgtc 76062 Query: 905 gctcccaactttgggaactt 924 || |||||||| || ||||| Sbjct: 76063 gcccccaacttcggcaactt 76082 Score = 131 bits (66), Expect = 7e-27 Identities = 264/330 (80%) Strand = Plus / Plus Query: 542 gcagggcttcccgtggccggcctgacggcgcttcaggccgtgagggccattggcaccaag 601 |||||||||||||| |||||||||||||| || ||||| |||| |||| ||||||||| Sbjct: 2907 gcagggcttcccgtcgccggcctgacggctctccaggcgctgagctccatcggcaccaag 2966 Query: 602 ttcgacggcacgggcgtcggcagcaacatcctgatcaccgctgcgtccggcggtatcggc 661 ||||| ||| ||||| |||| | || | ||||||||||| || ||| ||||| ||||| Sbjct: 2967 ttcgatggctcgggcaccggcgccgacgtgctgatcaccgcggcctccagcggtgtcggc 3026 Query: 662 tcgtacgccgtccagctcgctaagctcgggaaccacaacgtcacggccacctgcggcgcg 721 |||||||||||||||| || |||||||| |||||| |||||| |||| |||||||| Sbjct: 3027 acgtacgccgtccagctggccaagctcggcaaccaccgcgtcaccaccacgtgcggcgca 3086 Query: 722 cgaaacctggagcttgccgcgaacatcggcgccgacgaggcgctcgactacaagaccacg 781 || || ||||| || | || | | ||||||||||||||| ||||||||| ||| || Sbjct: 3087 cgcaatctggacctcgtcggcagcctcggcgccgacgaggtcctcgactacgccaccccg 3146 Query: 782 gaaggcgcggcactgaagaactcttccggcaagaagtacgactacatcgtcaacaccacg 841 || || || || || || | | ||||| | |||||||||||||||| ||||| ||| Sbjct: 3147 gagggggccgcgctcgcgagcccctccggtaggaagtacgactacatcatcaacctcacc 3206 Query: 842 aacggcggcaagtggtcggcgttcaagccg 871 || ||||||||||||||| ||||| |||| Sbjct: 3207 gaccgcggcaagtggtcggtgttcaggccg 3236 Score = 99.6 bits (50), Expect = 2e-17 Identities = 113/134 (84%) Strand = Plus / Plus Query: 1003 gtttctgcttgagctggtgaaggaaaggaagctcaagacagtcgtcgactcgcgccatcc 1062 |||||| || |||||| ||| |||| ||||||||||||| || ||||||||||| ||||| Sbjct: 3374 gtttctcctcgagctgatgagggaagggaagctcaagacggtggtcgactcgcggcatcc 3433 Query: 1063 attcgagaaggcagcagatgcgtgggaaaagagcttgagtggccatgcaacggggaaggt 1122 ||||||||||| || || |||||||| | |||| |||| ||||| || || |||||||| Sbjct: 3434 gttcgagaaggccgcggaggcgtgggagaggagcatgagcggccacgccaccgggaaggt 3493 Query: 1123 catagttgagatgt 1136 ||| || ||||||| Sbjct: 3494 catcgtggagatgt 3507 Score = 63.9 bits (32), Expect = 1e-06 Identities = 65/76 (85%) Strand = Plus / Plus Query: 363 cagtaaccgacgttgctggagagatcgttgaggttggttctgcggttcaagagttcaaag 422 ||||||| || ||| |||| ||| || |||||||||| |||||| |||| |||||||||| Sbjct: 2415 cagtaacggatgtttctggggaggtcattgaggttggctctgcgattcacgagttcaaag 2474 Query: 423 ttggcgacagagttgt 438 |||| |||| |||||| Sbjct: 2475 ttggtgacaaagttgt 2490 Score = 63.9 bits (32), Expect = 1e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 175 catgcgagccgtccagtacagtggctacggtggcggcagcgctgccct 222 |||||| ||||||||||||||||||||||| |||||| ||||||||| Sbjct: 73262 catgcgcgccgtccagtacagtggctacggcggcggcgccgctgccct 73309 Score = 63.9 bits (32), Expect = 1e-06 Identities = 107/132 (81%) Strand = Plus / Plus Query: 1007 ctgcttgagctggtgaaggaaaggaagctcaagacagtcgtcgactcgcgccatccattc 1066 ||||| |||||| || |||| ||||||||| ||| || ||||||||||| ||||| ||| Sbjct: 76168 ctgctcgagctgatgcgggaagggaagctcaggacggtggtcgactcgcggcatccgttc 76227 Query: 1067 gagaaggcagcagatgcgtgggaaaagagcttgagtggccatgcaacggggaaggtcata 1126 |||||||| || || || |||| | |||| | || |||||||| || || |||||||| Sbjct: 76228 gagaaggcggcggacgcatgggcgaggagcctcagcggccatgccactggaaaggtcatc 76287 Query: 1127 gttgagatgtga 1138 || ||||||||| Sbjct: 76288 gtggagatgtga 76299 Score = 58.0 bits (29), Expect = 8e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 229 tgtggagatccctgttccatcactgaagaaaggtgaagttcttataaaagttgaagcagc 288 |||||| ||||||||||| ||||| ||||| |||| |||| |||||| | |||||||| Sbjct: 2180 tgtggaaatccctgttccttcactcaagaagaatgaaattctcataaaaatagaagcagc 2239 Query: 289 aagcatcaatccagccgattgccggatacagaaagga 325 |||| |||| | ||| ||||| |||| ||||||||| Sbjct: 2240 aagcctcaaccaagctgattggaggattcagaaagga 2276 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 156 ccggtgggaggccagccagcatgcgagccgtccagtacagtggctacggtggcggc 211 |||| |||||||| |||| |||||| |||||||||||| | |||||||| |||||| Sbjct: 1175 ccggcgggaggccggccaccatgcgtgccgtccagtacggcggctacggcggcggc 1230 Score = 56.0 bits (28), Expect = 3e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 229 tgtggagatccctgttccatcactgaagaaaggtgaagttcttataaaagttgaagcagc 288 |||||| ||||||||||| || ||||||| | |||||||| ||||||| ||||| || Sbjct: 73510 tgtggaaatccctgttccttctgtgaagaaggacgaagttctcgtaaaagtagaagctgc 73569 Query: 289 aagcatcaatccagccgatt 308 ||||||||||| | |||||| Sbjct: 73570 aagcatcaatcaatccgatt 73589 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 380 ggagagatcgttgaggttggttctgcggttcaagagttcaaagttgg 426 |||||||||||||||||||| ||||| || | |||||||||||||| Sbjct: 73750 ggagagatcgttgaggttggctctgcagtacgcgagttcaaagttgg 73796 Score = 42.1 bits (21), Expect = 4.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 457 gaaagctggtggcctcgcagagtacgtagcggcatccgaga 497 |||||| || ||||| ||||||||||| |||||||| |||| Sbjct: 2822 gaaagcaggaggcctggcagagtacgtggcggcatcggaga 2862
>ref|NM_001059083.1| Oryza sativa (japonica cultivar-group) Os04g0359100 (Os04g0359100) mRNA, complete cds Length = 1157 Score = 161 bits (81), Expect = 8e-36 Identities = 305/380 (80%), Gaps = 6/380 (1%) Strand = Plus / Plus Query: 551 cccgtggccggcctgacggcgcttcaggccgtgagggccattggcaccaagttcgacggc 610 ||||| ||||||||||| ||||| ||||| | | |||||| |||||||||||||||||| Sbjct: 470 cccgtcgccggcctgacagcgctccaggcgctcaaggccatcggcaccaagttcgacggc 529 Query: 611 acggg------cgtcggcagcaacatcctgatcaccgctgcgtccggcggtatcggctcg 664 |||| || |||| | || | ||||||||||| || ||| |||| | ||| || Sbjct: 530 tcgggcaccagcggcggcgccgacgttctgatcaccgcggcctccagcggcgtgggcacg 589 Query: 665 tacgccgtccagctcgctaagctcgggaaccacaacgtcacggccacctgcggcgcgcga 724 ||||||||||||||||| |||||||| |||||| |||||| ||||| ||||||||||| Sbjct: 590 tacgccgtccagctcgccaagctcggcaaccaccgcgtcaccgccacatgcggcgcgcgc 649 Query: 725 aacctggagcttgccgcgaacatcggcgccgacgaggcgctcgactacaagaccacggaa 784 ||||| | || | ||| | ||||||||||||||| ||||||||||||||| |||| Sbjct: 650 aacctcggcctcgtcgctggcctcggcgccgacgaggtcctcgactacaagaccccggag 709 Query: 785 ggcgcggcactgaagaactcttccggcaagaagtacgactacatcgtcaacaccacgaac 844 || || || ||| || | | ||||||||||||||||||||||||||||||| || ||| Sbjct: 710 ggggccgcgctgtcgagcccctccggcaagaagtacgactacatcgtcaacatcagtaac 769 Query: 845 ggcggcaagtggtcggcgttcaagccgagtctcagcagccacggcagagtcatcgacgta 904 ||||||||||| |||||||||| | || |||||||| ||||| ||| ||||||| Sbjct: 770 aagaacaagtggtcggtgttcaagccgcgcctgagcagccatggcagggtcgtcgacgtc 829 Query: 905 gctcccaactttgggaactt 924 || |||||||| || ||||| Sbjct: 830 gcccccaacttcggcaactt 849 Score = 135 bits (68), Expect = 4e-28 Identities = 206/252 (81%) Strand = Plus / Plus Query: 175 catgcgagccgtccagtacagtggctacggtggcggcagcgctgccctcaagtatgtgga 234 |||||| ||||||||||||||||||||||| |||||| ||||||||| |||| |||||| Sbjct: 94 catgcgcgccgtccagtacagtggctacggcggcggcgccgctgcccttaagtttgtgga 153 Query: 235 gatccctgttccatcactgaagaaaggtgaagttcttataaaagttgaagcagcaagcat 294 ||||||||||| || ||||||| | |||||||| ||||||| ||||| |||||||| Sbjct: 154 aatccctgttccttctgtgaagaaggacgaagttctcgtaaaagtagaagctgcaagcat 213 Query: 295 caatccagccgattgccggatacagaaaggactgctacgtccttttgtcccgaagtttcc 354 ||||| | |||||| || |||||||| || | || || ||| |||||| ||||| Sbjct: 214 caatcaatccgatttgatgactcagaaagggatgatgcgcccctttcacccgaaatttcc 273 Query: 355 atttattccagtaaccgacgttgctggagagatcgttgaggttggttctgcggttcaaga 414 |||||||||||||| | || | |||||||||||||||||||| ||||| || | || Sbjct: 274 atttattccagtaaataatgtgtccggagagatcgttgaggttggctctgcagtacgcga 333 Query: 415 gttcaaagttgg 426 |||||||||||| Sbjct: 334 gttcaaagttgg 345 Score = 63.9 bits (32), Expect = 1e-06 Identities = 107/132 (81%) Strand = Plus / Plus Query: 1007 ctgcttgagctggtgaaggaaaggaagctcaagacagtcgtcgactcgcgccatccattc 1066 ||||| |||||| || |||| ||||||||| ||| || ||||||||||| ||||| ||| Sbjct: 935 ctgctcgagctgatgcgggaagggaagctcaggacggtggtcgactcgcggcatccgttc 994 Query: 1067 gagaaggcagcagatgcgtgggaaaagagcttgagtggccatgcaacggggaaggtcata 1126 |||||||| || || || |||| | |||| | || |||||||| || || |||||||| Sbjct: 995 gagaaggcggcggacgcatgggcgaggagcctcagcggccatgccactggaaaggtcatc 1054 Query: 1127 gttgagatgtga 1138 || ||||||||| Sbjct: 1055 gtggagatgtga 1066
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 161 bits (81), Expect = 8e-36 Identities = 305/380 (80%), Gaps = 6/380 (1%) Strand = Plus / Plus Query: 551 cccgtggccggcctgacggcgcttcaggccgtgagggccattggcaccaagttcgacggc 610 ||||| ||||||||||| ||||| ||||| | | |||||| |||||||||||||||||| Sbjct: 17192910 cccgtcgccggcctgacagcgctccaggcgctcaaggccatcggcaccaagttcgacggc 17192969 Query: 611 acggg------cgtcggcagcaacatcctgatcaccgctgcgtccggcggtatcggctcg 664 |||| || |||| | || | ||||||||||| || ||| |||| | ||| || Sbjct: 17192970 tcgggcaccagcggcggcgccgacgttctgatcaccgcggcctccagcggcgtgggcacg 17193029 Query: 665 tacgccgtccagctcgctaagctcgggaaccacaacgtcacggccacctgcggcgcgcga 724 ||||||||||||||||| |||||||| |||||| |||||| ||||| ||||||||||| Sbjct: 17193030 tacgccgtccagctcgccaagctcggcaaccaccgcgtcaccgccacatgcggcgcgcgc 17193089 Query: 725 aacctggagcttgccgcgaacatcggcgccgacgaggcgctcgactacaagaccacggaa 784 ||||| | || | ||| | ||||||||||||||| ||||||||||||||| |||| Sbjct: 17193090 aacctcggcctcgtcgctggcctcggcgccgacgaggtcctcgactacaagaccccggag 17193149 Query: 785 ggcgcggcactgaagaactcttccggcaagaagtacgactacatcgtcaacaccacgaac 844 || || || ||| || | | ||||||||||||||||||||||||||||||| || ||| Sbjct: 17193150 ggggccgcgctgtcgagcccctccggcaagaagtacgactacatcgtcaacatcagtaac 17193209 Query: 845 ggcggcaagtggtcggcgttcaagccgagtctcagcagccacggcagagtcatcgacgta 904 ||||||||||| |||||||||| | || |||||||| ||||| ||| ||||||| Sbjct: 17193210 aagaacaagtggtcggtgttcaagccgcgcctgagcagccatggcagggtcgtcgacgtc 17193269 Query: 905 gctcccaactttgggaactt 924 || |||||||| || ||||| Sbjct: 17193270 gcccccaacttcggcaactt 17193289 Score = 131 bits (66), Expect = 7e-27 Identities = 264/330 (80%) Strand = Plus / Plus Query: 542 gcagggcttcccgtggccggcctgacggcgcttcaggccgtgagggccattggcaccaag 601 |||||||||||||| |||||||||||||| || ||||| |||| |||| ||||||||| Sbjct: 17120058 gcagggcttcccgtcgccggcctgacggctctccaggcgctgagctccatcggcaccaag 17120117 Query: 602 ttcgacggcacgggcgtcggcagcaacatcctgatcaccgctgcgtccggcggtatcggc 661 ||||| ||| ||||| |||| | || | ||||||||||| || ||| ||||| ||||| Sbjct: 17120118 ttcgatggctcgggcaccggcgccgacgtgctgatcaccgcggcctccagcggtgtcggc 17120177 Query: 662 tcgtacgccgtccagctcgctaagctcgggaaccacaacgtcacggccacctgcggcgcg 721 |||||||||||||||| || |||||||| |||||| |||||| |||| |||||||| Sbjct: 17120178 acgtacgccgtccagctggccaagctcggcaaccaccgcgtcaccaccacgtgcggcgca 17120237 Query: 722 cgaaacctggagcttgccgcgaacatcggcgccgacgaggcgctcgactacaagaccacg 781 || || ||||| || | || | | ||||||||||||||| ||||||||| ||| || Sbjct: 17120238 cgcaatctggacctcgtcggcagcctcggcgccgacgaggtcctcgactacgccaccccg 17120297 Query: 782 gaaggcgcggcactgaagaactcttccggcaagaagtacgactacatcgtcaacaccacg 841 || || || || || || | | ||||| | |||||||||||||||| ||||| ||| Sbjct: 17120298 gagggggccgcgctcgcgagcccctccggtaggaagtacgactacatcatcaacctcacc 17120357 Query: 842 aacggcggcaagtggtcggcgttcaagccg 871 || ||||||||||||||| ||||| |||| Sbjct: 17120358 gaccgcggcaagtggtcggtgttcaggccg 17120387 Score = 105 bits (53), Expect = 4e-19 Identities = 174/211 (82%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 632 ctgatcaccgctgcgtccggcggtatcggctcgtacgccgtccagctcgctaagctcggg 691 |||||||||||||| |||||||| ||||| | ||||||||||||||||| |||||||| Sbjct: 17213005 ctgatcaccgctgcctccggcggcgtcggcacctacgccgtccagctcgccaagctcggc 17213064 Query: 692 aaccacaacgtcacggccacctgcggcgcgcgaaacctggagcttg-ccgcgaacatcgg 750 |||||| |||||| |||||||||||||| || ||| |||| || | |||| | |||| Sbjct: 17213065 aaccaccgcgtcaccgccacctgcggcgcccgcaacatggacctcgtccgc-tccctcgg 17213123 Query: 751 cgccgacgaggcgctcgactacaagaccacggaaggcgcggcactgaagaact---cttc 807 ||||||||||| ||||||||||| ||| | ||||||| || |||| || || | || Sbjct: 17213124 cgccgacgaggtcctcgactacaataccccccaaggcgccgccctgacgagctcggcctc 17213183 Query: 808 cggcaagaagtacgactacatcgtcaacacc 838 || | ||||||||||||||||| |||||||| Sbjct: 17213184 cgacgagaagtacgactacatcatcaacacc 17213214 Score = 99.6 bits (50), Expect = 2e-17 Identities = 113/134 (84%) Strand = Plus / Plus Query: 1003 gtttctgcttgagctggtgaaggaaaggaagctcaagacagtcgtcgactcgcgccatcc 1062 |||||| || |||||| ||| |||| ||||||||||||| || ||||||||||| ||||| Sbjct: 17120525 gtttctcctcgagctgatgagggaagggaagctcaagacggtggtcgactcgcggcatcc 17120584 Query: 1063 attcgagaaggcagcagatgcgtgggaaaagagcttgagtggccatgcaacggggaaggt 1122 ||||||||||| || || |||||||| | |||| |||| ||||| || || |||||||| Sbjct: 17120585 gttcgagaaggccgcggaggcgtgggagaggagcatgagcggccacgccaccgggaaggt 17120644 Query: 1123 catagttgagatgt 1136 ||| || ||||||| Sbjct: 17120645 catcgtggagatgt 17120658 Score = 75.8 bits (38), Expect = 3e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 1029 ggaagctcaagacagtcgtcgactcgcgccatccattcgagaaggcagcagatgcgtggg 1088 ||||||||| ||| || ||||||||||| ||| ||||||||||| || || ||||||| Sbjct: 17213408 ggaagctcaggacggtggtcgactcgcggtgtccgttcgagaaggcggcggaggcgtggg 17213467 Query: 1089 aaaagagcttgagtggccatgcaacggggaaggtcatagttgagatgtga 1138 | |||||| || | |||||||| ||||| |||||||| || ||||||||| Sbjct: 17213468 agaagagcatgggcggccatgccacgggtaaggtcatcgtggagatgtga 17213517 Score = 63.9 bits (32), Expect = 1e-06 Identities = 65/76 (85%) Strand = Plus / Plus Query: 363 cagtaaccgacgttgctggagagatcgttgaggttggttctgcggttcaagagttcaaag 422 ||||||| || ||| |||| ||| || |||||||||| |||||| |||| |||||||||| Sbjct: 17119566 cagtaacggatgtttctggggaggtcattgaggttggctctgcgattcacgagttcaaag 17119625 Query: 423 ttggcgacagagttgt 438 |||| |||| |||||| Sbjct: 17119626 ttggtgacaaagttgt 17119641 Score = 63.9 bits (32), Expect = 1e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 175 catgcgagccgtccagtacagtggctacggtggcggcagcgctgccct 222 |||||| ||||||||||||||||||||||| |||||| ||||||||| Sbjct: 17190469 catgcgcgccgtccagtacagtggctacggcggcggcgccgctgccct 17190516 Score = 63.9 bits (32), Expect = 1e-06 Identities = 107/132 (81%) Strand = Plus / Plus Query: 1007 ctgcttgagctggtgaaggaaaggaagctcaagacagtcgtcgactcgcgccatccattc 1066 ||||| |||||| || |||| ||||||||| ||| || ||||||||||| ||||| ||| Sbjct: 17193375 ctgctcgagctgatgcgggaagggaagctcaggacggtggtcgactcgcggcatccgttc 17193434 Query: 1067 gagaaggcagcagatgcgtgggaaaagagcttgagtggccatgcaacggggaaggtcata 1126 |||||||| || || || |||| | |||| | || |||||||| || || |||||||| Sbjct: 17193435 gagaaggcggcggacgcatgggcgaggagcctcagcggccatgccactggaaaggtcatc 17193494 Query: 1127 gttgagatgtga 1138 || ||||||||| Sbjct: 17193495 gtggagatgtga 17193506 Score = 58.0 bits (29), Expect = 8e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 229 tgtggagatccctgttccatcactgaagaaaggtgaagttcttataaaagttgaagcagc 288 |||||| ||||||||||| ||||| ||||| |||| |||| |||||| | |||||||| Sbjct: 17119331 tgtggaaatccctgttccttcactcaagaagaatgaaattctcataaaaatagaagcagc 17119390 Query: 289 aagcatcaatccagccgattgccggatacagaaagga 325 |||| |||| | ||| ||||| |||| ||||||||| Sbjct: 17119391 aagcctcaaccaagctgattggaggattcagaaagga 17119427 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 156 ccggtgggaggccagccagcatgcgagccgtccagtacagtggctacggtggcggc 211 |||| |||||||| |||| |||||| |||||||||||| | |||||||| |||||| Sbjct: 17118326 ccggcgggaggccggccaccatgcgtgccgtccagtacggcggctacggcggcggc 17118381 Score = 56.0 bits (28), Expect = 3e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 229 tgtggagatccctgttccatcactgaagaaaggtgaagttcttataaaagttgaagcagc 288 |||||| ||||||||||| || ||||||| | |||||||| ||||||| ||||| || Sbjct: 17190717 tgtggaaatccctgttccttctgtgaagaaggacgaagttctcgtaaaagtagaagctgc 17190776 Query: 289 aagcatcaatccagccgatt 308 ||||||||||| | |||||| Sbjct: 17190777 aagcatcaatcaatccgatt 17190796 Score = 56.0 bits (28), Expect = 3e-04 Identities = 109/136 (80%) Strand = Plus / Plus Query: 230 gtggagatccctgttccatcactgaagaaaggtgaagttcttataaaagttgaagcagca 289 ||||| ||||||||||| || |||||||| |||||||||||| ||||| ||||| ||| Sbjct: 17211946 gtggaaatccctgttccttcggtgaagaaacatgaagttcttattaaagtcgaagctgca 17212005 Query: 290 agcatcaatccagccgattgccggatacagaaaggactgctacgtccttttgtcccgaag 349 ||| | || || ||||| | || |||||||| ||||||| || ||| | || ||| Sbjct: 17212006 agcgttaacccgattgattggagtattcagaaagggatgctacgcccatttcttcccaag 17212065 Query: 350 tttccatttattccag 365 |||||||||||||||| Sbjct: 17212066 tttccatttattccag 17212081 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 380 ggagagatcgttgaggttggttctgcggttcaagagttcaaagttgg 426 |||||||||||||||||||| ||||| || | |||||||||||||| Sbjct: 17190957 ggagagatcgttgaggttggctctgcagtacgcgagttcaaagttgg 17191003 Score = 48.1 bits (24), Expect = 0.078 Identities = 45/52 (86%) Strand = Plus / Plus Query: 566 acggcgcttcaggccgtgagggccattggcaccaagttcgacggcacgggcg 617 |||||||| ||||| ||||| |||| ||| |||||||||||||||| |||| Sbjct: 18181380 acggcgctgcaggcgctgaggtccatcggcgccaagttcgacggcaccggcg 18181431 Score = 48.1 bits (24), Expect = 0.078 Identities = 48/56 (85%) Strand = Plus / Plus Query: 665 tacgccgtccagctcgctaagctcgggaaccacaacgtcacggccacctgcggcgc 720 |||||||| ||||| || ||||| | ||||| | |||| ||||||||||||||||| Sbjct: 18181479 tacgccgtgcagctggccaagctggcgaacctccacgtgacggccacctgcggcgc 18181534 Score = 42.1 bits (21), Expect = 4.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 457 gaaagctggtggcctcgcagagtacgtagcggcatccgaga 497 |||||| || ||||| ||||||||||| |||||||| |||| Sbjct: 17119973 gaaagcaggaggcctggcagagtacgtggcggcatcggaga 17120013 Score = 42.1 bits (21), Expect = 4.8 Identities = 66/81 (81%) Strand = Plus / Plus Query: 1058 catccattcgagaaggcagcagatgcgtgggaaaagagcttgagtggccatgcaacgggg 1117 |||||||||||| |||| || || ||||||| |||||| |||| |||||||| || Sbjct: 17209503 catccattcgaggaggcggcggagccgtgggagaagagcaccggtggtcatgcaacacgg 17209562 Query: 1118 aaggtcatagttgagatgtga 1138 |||||||| || ||||||||| Sbjct: 17209563 aaggtcattgtggagatgtga 17209583
>emb|AL662956.3|OSJN00159 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018J19, complete sequence Length = 169559 Score = 161 bits (81), Expect = 8e-36 Identities = 305/380 (80%), Gaps = 6/380 (1%) Strand = Plus / Plus Query: 551 cccgtggccggcctgacggcgcttcaggccgtgagggccattggcaccaagttcgacggc 610 ||||| ||||||||||| ||||| ||||| | | |||||| |||||||||||||||||| Sbjct: 137207 cccgtcgccggcctgacagcgctccaggcgctcaaggccatcggcaccaagttcgacggc 137266 Query: 611 acggg------cgtcggcagcaacatcctgatcaccgctgcgtccggcggtatcggctcg 664 |||| || |||| | || | ||||||||||| || ||| |||| | ||| || Sbjct: 137267 tcgggcaccagcggcggcgccgacgttctgatcaccgcggcctccagcggcgtgggcacg 137326 Query: 665 tacgccgtccagctcgctaagctcgggaaccacaacgtcacggccacctgcggcgcgcga 724 ||||||||||||||||| |||||||| |||||| |||||| ||||| ||||||||||| Sbjct: 137327 tacgccgtccagctcgccaagctcggcaaccaccgcgtcaccgccacatgcggcgcgcgc 137386 Query: 725 aacctggagcttgccgcgaacatcggcgccgacgaggcgctcgactacaagaccacggaa 784 ||||| | || | ||| | ||||||||||||||| ||||||||||||||| |||| Sbjct: 137387 aacctcggcctcgtcgctggcctcggcgccgacgaggtcctcgactacaagaccccggag 137446 Query: 785 ggcgcggcactgaagaactcttccggcaagaagtacgactacatcgtcaacaccacgaac 844 || || || ||| || | | ||||||||||||||||||||||||||||||| || ||| Sbjct: 137447 ggggccgcgctgtcgagcccctccggcaagaagtacgactacatcgtcaacatcagtaac 137506 Query: 845 ggcggcaagtggtcggcgttcaagccgagtctcagcagccacggcagagtcatcgacgta 904 ||||||||||| |||||||||| | || |||||||| ||||| ||| ||||||| Sbjct: 137507 aagaacaagtggtcggtgttcaagccgcgcctgagcagccatggcagggtcgtcgacgtc 137566 Query: 905 gctcccaactttgggaactt 924 || |||||||| || ||||| Sbjct: 137567 gcccccaacttcggcaactt 137586 Score = 131 bits (66), Expect = 7e-27 Identities = 264/330 (80%) Strand = Plus / Plus Query: 542 gcagggcttcccgtggccggcctgacggcgcttcaggccgtgagggccattggcaccaag 601 |||||||||||||| |||||||||||||| || ||||| |||| |||| ||||||||| Sbjct: 64355 gcagggcttcccgtcgccggcctgacggctctccaggcgctgagctccatcggcaccaag 64414 Query: 602 ttcgacggcacgggcgtcggcagcaacatcctgatcaccgctgcgtccggcggtatcggc 661 ||||| ||| ||||| |||| | || | ||||||||||| || ||| ||||| ||||| Sbjct: 64415 ttcgatggctcgggcaccggcgccgacgtgctgatcaccgcggcctccagcggtgtcggc 64474 Query: 662 tcgtacgccgtccagctcgctaagctcgggaaccacaacgtcacggccacctgcggcgcg 721 |||||||||||||||| || |||||||| |||||| |||||| |||| |||||||| Sbjct: 64475 acgtacgccgtccagctggccaagctcggcaaccaccgcgtcaccaccacgtgcggcgca 64534 Query: 722 cgaaacctggagcttgccgcgaacatcggcgccgacgaggcgctcgactacaagaccacg 781 || || ||||| || | || | | ||||||||||||||| ||||||||| ||| || Sbjct: 64535 cgcaatctggacctcgtcggcagcctcggcgccgacgaggtcctcgactacgccaccccg 64594 Query: 782 gaaggcgcggcactgaagaactcttccggcaagaagtacgactacatcgtcaacaccacg 841 || || || || || || | | ||||| | |||||||||||||||| ||||| ||| Sbjct: 64595 gagggggccgcgctcgcgagcccctccggtaggaagtacgactacatcatcaacctcacc 64654 Query: 842 aacggcggcaagtggtcggcgttcaagccg 871 || ||||||||||||||| ||||| |||| Sbjct: 64655 gaccgcggcaagtggtcggtgttcaggccg 64684 Score = 105 bits (53), Expect = 4e-19 Identities = 174/211 (82%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 632 ctgatcaccgctgcgtccggcggtatcggctcgtacgccgtccagctcgctaagctcggg 691 |||||||||||||| |||||||| ||||| | ||||||||||||||||| |||||||| Sbjct: 157302 ctgatcaccgctgcctccggcggcgtcggcacctacgccgtccagctcgccaagctcggc 157361 Query: 692 aaccacaacgtcacggccacctgcggcgcgcgaaacctggagcttg-ccgcgaacatcgg 750 |||||| |||||| |||||||||||||| || ||| |||| || | |||| | |||| Sbjct: 157362 aaccaccgcgtcaccgccacctgcggcgcccgcaacatggacctcgtccgc-tccctcgg 157420 Query: 751 cgccgacgaggcgctcgactacaagaccacggaaggcgcggcactgaagaact---cttc 807 ||||||||||| ||||||||||| ||| | ||||||| || |||| || || | || Sbjct: 157421 cgccgacgaggtcctcgactacaataccccccaaggcgccgccctgacgagctcggcctc 157480 Query: 808 cggcaagaagtacgactacatcgtcaacacc 838 || | ||||||||||||||||| |||||||| Sbjct: 157481 cgacgagaagtacgactacatcatcaacacc 157511 Score = 99.6 bits (50), Expect = 2e-17 Identities = 113/134 (84%) Strand = Plus / Plus Query: 1003 gtttctgcttgagctggtgaaggaaaggaagctcaagacagtcgtcgactcgcgccatcc 1062 |||||| || |||||| ||| |||| ||||||||||||| || ||||||||||| ||||| Sbjct: 64822 gtttctcctcgagctgatgagggaagggaagctcaagacggtggtcgactcgcggcatcc 64881 Query: 1063 attcgagaaggcagcagatgcgtgggaaaagagcttgagtggccatgcaacggggaaggt 1122 ||||||||||| || || |||||||| | |||| |||| ||||| || || |||||||| Sbjct: 64882 gttcgagaaggccgcggaggcgtgggagaggagcatgagcggccacgccaccgggaaggt 64941 Query: 1123 catagttgagatgt 1136 ||| || ||||||| Sbjct: 64942 catcgtggagatgt 64955 Score = 75.8 bits (38), Expect = 3e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 1029 ggaagctcaagacagtcgtcgactcgcgccatccattcgagaaggcagcagatgcgtggg 1088 ||||||||| ||| || ||||||||||| ||| ||||||||||| || || ||||||| Sbjct: 157705 ggaagctcaggacggtggtcgactcgcggtgtccgttcgagaaggcggcggaggcgtggg 157764 Query: 1089 aaaagagcttgagtggccatgcaacggggaaggtcatagttgagatgtga 1138 | |||||| || | |||||||| ||||| |||||||| || ||||||||| Sbjct: 157765 agaagagcatgggcggccatgccacgggtaaggtcatcgtggagatgtga 157814 Score = 63.9 bits (32), Expect = 1e-06 Identities = 65/76 (85%) Strand = Plus / Plus Query: 363 cagtaaccgacgttgctggagagatcgttgaggttggttctgcggttcaagagttcaaag 422 ||||||| || ||| |||| ||| || |||||||||| |||||| |||| |||||||||| Sbjct: 63863 cagtaacggatgtttctggggaggtcattgaggttggctctgcgattcacgagttcaaag 63922 Query: 423 ttggcgacagagttgt 438 |||| |||| |||||| Sbjct: 63923 ttggtgacaaagttgt 63938 Score = 63.9 bits (32), Expect = 1e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 175 catgcgagccgtccagtacagtggctacggtggcggcagcgctgccct 222 |||||| ||||||||||||||||||||||| |||||| ||||||||| Sbjct: 134766 catgcgcgccgtccagtacagtggctacggcggcggcgccgctgccct 134813 Score = 63.9 bits (32), Expect = 1e-06 Identities = 107/132 (81%) Strand = Plus / Plus Query: 1007 ctgcttgagctggtgaaggaaaggaagctcaagacagtcgtcgactcgcgccatccattc 1066 ||||| |||||| || |||| ||||||||| ||| || ||||||||||| ||||| ||| Sbjct: 137672 ctgctcgagctgatgcgggaagggaagctcaggacggtggtcgactcgcggcatccgttc 137731 Query: 1067 gagaaggcagcagatgcgtgggaaaagagcttgagtggccatgcaacggggaaggtcata 1126 |||||||| || || || |||| | |||| | || |||||||| || || |||||||| Sbjct: 137732 gagaaggcggcggacgcatgggcgaggagcctcagcggccatgccactggaaaggtcatc 137791 Query: 1127 gttgagatgtga 1138 || ||||||||| Sbjct: 137792 gtggagatgtga 137803 Score = 58.0 bits (29), Expect = 8e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 229 tgtggagatccctgttccatcactgaagaaaggtgaagttcttataaaagttgaagcagc 288 |||||| ||||||||||| ||||| ||||| |||| |||| |||||| | |||||||| Sbjct: 63628 tgtggaaatccctgttccttcactcaagaagaatgaaattctcataaaaatagaagcagc 63687 Query: 289 aagcatcaatccagccgattgccggatacagaaagga 325 |||| |||| | ||| ||||| |||| ||||||||| Sbjct: 63688 aagcctcaaccaagctgattggaggattcagaaagga 63724 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 156 ccggtgggaggccagccagcatgcgagccgtccagtacagtggctacggtggcggc 211 |||| |||||||| |||| |||||| |||||||||||| | |||||||| |||||| Sbjct: 62623 ccggcgggaggccggccaccatgcgtgccgtccagtacggcggctacggcggcggc 62678 Score = 56.0 bits (28), Expect = 3e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 229 tgtggagatccctgttccatcactgaagaaaggtgaagttcttataaaagttgaagcagc 288 |||||| ||||||||||| || ||||||| | |||||||| ||||||| ||||| || Sbjct: 135014 tgtggaaatccctgttccttctgtgaagaaggacgaagttctcgtaaaagtagaagctgc 135073 Query: 289 aagcatcaatccagccgatt 308 ||||||||||| | |||||| Sbjct: 135074 aagcatcaatcaatccgatt 135093 Score = 56.0 bits (28), Expect = 3e-04 Identities = 109/136 (80%) Strand = Plus / Plus Query: 230 gtggagatccctgttccatcactgaagaaaggtgaagttcttataaaagttgaagcagca 289 ||||| ||||||||||| || |||||||| |||||||||||| ||||| ||||| ||| Sbjct: 156243 gtggaaatccctgttccttcggtgaagaaacatgaagttcttattaaagtcgaagctgca 156302 Query: 290 agcatcaatccagccgattgccggatacagaaaggactgctacgtccttttgtcccgaag 349 ||| | || || ||||| | || |||||||| ||||||| || ||| | || ||| Sbjct: 156303 agcgttaacccgattgattggagtattcagaaagggatgctacgcccatttcttcccaag 156362 Query: 350 tttccatttattccag 365 |||||||||||||||| Sbjct: 156363 tttccatttattccag 156378 Score = 54.0 bits (27), Expect = 0.001 Identities = 42/47 (89%) Strand = Plus / Plus Query: 380 ggagagatcgttgaggttggttctgcggttcaagagttcaaagttgg 426 |||||||||||||||||||| ||||| || | |||||||||||||| Sbjct: 135254 ggagagatcgttgaggttggctctgcagtacgcgagttcaaagttgg 135300 Score = 42.1 bits (21), Expect = 4.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 457 gaaagctggtggcctcgcagagtacgtagcggcatccgaga 497 |||||| || ||||| ||||||||||| |||||||| |||| Sbjct: 64270 gaaagcaggaggcctggcagagtacgtggcggcatcggaga 64310 Score = 42.1 bits (21), Expect = 4.8 Identities = 66/81 (81%) Strand = Plus / Plus Query: 1058 catccattcgagaaggcagcagatgcgtgggaaaagagcttgagtggccatgcaacgggg 1117 |||||||||||| |||| || || ||||||| |||||| |||| |||||||| || Sbjct: 153800 catccattcgaggaggcggcggagccgtgggagaagagcaccggtggtcatgcaacacgg 153859 Query: 1118 aaggtcatagttgagatgtga 1138 |||||||| || ||||||||| Sbjct: 153860 aaggtcattgtggagatgtga 153880
>dbj|AK069384.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013H17, full insert sequence Length = 1158 Score = 153 bits (77), Expect = 2e-33 Identities = 304/380 (80%), Gaps = 6/380 (1%) Strand = Plus / Plus Query: 551 cccgtggccggcctgacggcgcttcaggccgtgagggccattggcaccaagttcgacggc 610 ||||| ||||||||||| ||||| ||||| | | |||||| |||||||||||||||||| Sbjct: 471 cccgtcgccggcctgacagcgctccaggcgctcaaggccatcggcaccaagttcgacggc 530 Query: 611 acggg------cgtcggcagcaacatcctgatcaccgctgcgtccggcggtatcggctcg 664 |||| || |||| | || | ||||||||||| || ||| |||| | ||| || Sbjct: 531 tcgggcaccagcggcggcgccgacgttctgatcaccgcggcctccagcggcgtgggcacg 590 Query: 665 tacgccgtccagctcgctaagctcgggaaccacaacgtcacggccacctgcggcgcgcga 724 ||||||||||||||||| |||||||| |||||| |||||| ||||| ||||||||||| Sbjct: 591 tacgccgtccagctcgccaagctcggcaaccaccgcgtcaccgccacatgcggcgcgcgc 650 Query: 725 aacctggagcttgccgcgaacatcggcgccgacgaggcgctcgactacaagaccacggaa 784 ||||| | || | ||| | |||||||||||| || ||||||||||||||| |||| Sbjct: 651 aacctcggcctcgtcgctggcctcggcgccgacggggtcctcgactacaagaccccggag 710 Query: 785 ggcgcggcactgaagaactcttccggcaagaagtacgactacatcgtcaacaccacgaac 844 || || || ||| || | | ||||||||||||||||||||||||||||||| || ||| Sbjct: 711 ggggccgcgctgtcgagcccctccggcaagaagtacgactacatcgtcaacatcagtaac 770 Query: 845 ggcggcaagtggtcggcgttcaagccgagtctcagcagccacggcagagtcatcgacgta 904 ||||||||||| |||||||||| | || |||||||| ||||| ||| ||||||| Sbjct: 771 aagaacaagtggtcggtgttcaagccgcgcctgagcagccatggcagggtcgtcgacgtc 830 Query: 905 gctcccaactttgggaactt 924 || |||||||| || ||||| Sbjct: 831 gcccccaacttcggcaactt 850 Score = 135 bits (68), Expect = 4e-28 Identities = 206/252 (81%) Strand = Plus / Plus Query: 175 catgcgagccgtccagtacagtggctacggtggcggcagcgctgccctcaagtatgtgga 234 |||||| ||||||||||||||||||||||| |||||| ||||||||| |||| |||||| Sbjct: 95 catgcgcgccgtccagtacagtggctacggcggcggcgccgctgcccttaagtttgtgga 154 Query: 235 gatccctgttccatcactgaagaaaggtgaagttcttataaaagttgaagcagcaagcat 294 ||||||||||| || ||||||| | |||||||| ||||||| ||||| |||||||| Sbjct: 155 aatccctgttccttctgtgaagaaggacgaagttctcgtaaaagtagaagctgcaagcat 214 Query: 295 caatccagccgattgccggatacagaaaggactgctacgtccttttgtcccgaagtttcc 354 ||||| | |||||| || |||||||| || | || || ||| |||||| ||||| Sbjct: 215 caatcaatccgatttgatgactcagaaagggatgatgcgcccctttcacccgaaatttcc 274 Query: 355 atttattccagtaaccgacgttgctggagagatcgttgaggttggttctgcggttcaaga 414 |||||||||||||| | || | |||||||||||||||||||| ||||| || | || Sbjct: 275 atttattccagtaaataatgtgtccggagagatcgttgaggttggctctgcagtacgcga 334 Query: 415 gttcaaagttgg 426 |||||||||||| Sbjct: 335 gttcaaagttgg 346 Score = 63.9 bits (32), Expect = 1e-06 Identities = 107/132 (81%) Strand = Plus / Plus Query: 1007 ctgcttgagctggtgaaggaaaggaagctcaagacagtcgtcgactcgcgccatccattc 1066 ||||| |||||| || |||| ||||||||| ||| || ||||||||||| ||||| ||| Sbjct: 936 ctgctcgagctgatgcgggaagggaagctcaggacggtggtcgactcgcggcatccgttc 995 Query: 1067 gagaaggcagcagatgcgtgggaaaagagcttgagtggccatgcaacggggaaggtcata 1126 |||||||| || || || |||| | |||| | || |||||||| || || |||||||| Sbjct: 996 gagaaggcggcggacgcatgggcgaggagcctcagcggccatgccactggaaaggtcatc 1055 Query: 1127 gttgagatgtga 1138 || ||||||||| Sbjct: 1056 gtggagatgtga 1067
>emb|CR855124.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0105P02, complete sequence Length = 98540 Score = 131 bits (66), Expect = 7e-27 Identities = 264/330 (80%) Strand = Plus / Plus Query: 542 gcagggcttcccgtggccggcctgacggcgcttcaggccgtgagggccattggcaccaag 601 |||||||||||||| |||||||||||||| || ||||| |||| |||| ||||||||| Sbjct: 85141 gcagggcttcccgtcgccggcctgacggctctccaggcgctgagctccatcggcaccaag 85200 Query: 602 ttcgacggcacgggcgtcggcagcaacatcctgatcaccgctgcgtccggcggtatcggc 661 ||||| ||| ||||| |||| | || | ||||||||||| || ||| ||||| ||||| Sbjct: 85201 ttcgatggctcgggcaccggcgccgacgtgctgatcaccgcggcctccagcggtgtcggc 85260 Query: 662 tcgtacgccgtccagctcgctaagctcgggaaccacaacgtcacggccacctgcggcgcg 721 |||||||||||||||| || |||||||| |||||| |||||| |||| |||||||| Sbjct: 85261 acgtacgccgtccagctggccaagctcggcaaccaccgcgtcaccaccacgtgcggcgca 85320 Query: 722 cgaaacctggagcttgccgcgaacatcggcgccgacgaggcgctcgactacaagaccacg 781 || || ||||| || | || | | ||||||||||||||| ||||||||| ||| || Sbjct: 85321 cgcaatctggacctcgtcggcagcctcggcgccgacgaggtcctcgactacgccaccccg 85380 Query: 782 gaaggcgcggcactgaagaactcttccggcaagaagtacgactacatcgtcaacaccacg 841 || || || || || || | | ||||| | |||||||||||||||| ||||| ||| Sbjct: 85381 gagggggccgcgctcgcgagcccctccggtaggaagtacgactacatcatcaacctcacc 85440 Query: 842 aacggcggcaagtggtcggcgttcaagccg 871 || ||||||||||||||| ||||| |||| Sbjct: 85441 gaccgcggcaagtggtcggtgttcaggccg 85470 Score = 99.6 bits (50), Expect = 2e-17 Identities = 113/134 (84%) Strand = Plus / Plus Query: 1003 gtttctgcttgagctggtgaaggaaaggaagctcaagacagtcgtcgactcgcgccatcc 1062 |||||| || |||||| ||| |||| ||||||||||||| || ||||||||||| ||||| Sbjct: 85608 gtttctcctcgagctgatgagggaagggaagctcaagacggtggtcgactcgcggcatcc 85667 Query: 1063 attcgagaaggcagcagatgcgtgggaaaagagcttgagtggccatgcaacggggaaggt 1122 ||||||||||| || || |||||||| | |||| |||| ||||| || || |||||||| Sbjct: 85668 gttcgagaaggccgcggaggcgtgggagaggagcatgagcggccacgccaccgggaaggt 85727 Query: 1123 catagttgagatgt 1136 ||| || ||||||| Sbjct: 85728 catcgtggagatgt 85741 Score = 63.9 bits (32), Expect = 1e-06 Identities = 65/76 (85%) Strand = Plus / Plus Query: 363 cagtaaccgacgttgctggagagatcgttgaggttggttctgcggttcaagagttcaaag 422 ||||||| || ||| |||| ||| || |||||||||| |||||| |||| |||||||||| Sbjct: 84649 cagtaacggatgtttctggggaggtcattgaggttggctctgcgattcacgagttcaaag 84708 Query: 423 ttggcgacagagttgt 438 |||| |||| |||||| Sbjct: 84709 ttggtgacaaagttgt 84724 Score = 58.0 bits (29), Expect = 8e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 229 tgtggagatccctgttccatcactgaagaaaggtgaagttcttataaaagttgaagcagc 288 |||||| ||||||||||| ||||| ||||| |||| |||| |||||| | |||||||| Sbjct: 84414 tgtggaaatccctgttccttcactcaagaagaatgaaattctcataaaaatagaagcagc 84473 Query: 289 aagcatcaatccagccgattgccggatacagaaagga 325 |||| |||| | ||| ||||| |||| ||||||||| Sbjct: 84474 aagcctcaaccaagctgattggaggattcagaaagga 84510 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 156 ccggtgggaggccagccagcatgcgagccgtccagtacagtggctacggtggcggc 211 |||| |||||||| |||| |||||| |||||||||||| | |||||||| |||||| Sbjct: 83409 ccggcgggaggccggccaccatgcgtgccgtccagtacggcggctacggcggcggc 83464 Score = 42.1 bits (21), Expect = 4.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 457 gaaagctggtggcctcgcagagtacgtagcggcatccgaga 497 |||||| || ||||| ||||||||||| |||||||| |||| Sbjct: 85056 gaaagcaggaggcctggcagagtacgtggcggcatcggaga 85096
>ref|NM_001059084.1| Oryza sativa (japonica cultivar-group) Os04g0359700 (Os04g0359700) mRNA, complete cds Length = 1146 Score = 109 bits (55), Expect = 2e-20 Identities = 214/267 (80%) Strand = Plus / Plus Query: 170 gccagcatgcgagccgtccagtacagtggctacggtggcggcagcgctgccctcaagtat 229 |||| |||||| || || ||||||| |||||||| |||||| || |||||||||| | Sbjct: 169 gccaccatgcgcgcggtgcagtacaccggctacggcggcggcgccggtgccctcaagcac 228 Query: 230 gtggagatccctgttccatcactgaagaaaggtgaagttcttataaaagttgaagcagca 289 ||||| ||||||||||| || |||||||| |||||||||||| ||||| ||||| ||| Sbjct: 229 gtggaaatccctgttccttcggtgaagaaacatgaagttcttattaaagtcgaagctgca 288 Query: 290 agcatcaatccagccgattgccggatacagaaaggactgctacgtccttttgtcccgaag 349 ||| | || || ||||| | || |||||||| ||||||| || ||| | || ||| Sbjct: 289 agcgttaacccgattgattggagtattcagaaagggatgctacgcccatttcttcccaag 348 Query: 350 tttccatttattccagtaaccgacgttgctggagagatcgttgaggttggttctgcggtt 409 ||||||||||||||||| || || ||||| || ||||| || |||| ||||||||| || Sbjct: 349 tttccatttattccagtgactgatgttgccggggagattgtggaggctggttctgcagta 408 Query: 410 caagagttcaaagttggcgacagagtt 436 || ||| |||||||||| |||| |||| Sbjct: 409 catgagctcaaagttggtgacaaagtt 435 Score = 105 bits (53), Expect = 4e-19 Identities = 174/211 (82%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 632 ctgatcaccgctgcgtccggcggtatcggctcgtacgccgtccagctcgctaagctcggg 691 |||||||||||||| |||||||| ||||| | ||||||||||||||||| |||||||| Sbjct: 634 ctgatcaccgctgcctccggcggcgtcggcacctacgccgtccagctcgccaagctcggc 693 Query: 692 aaccacaacgtcacggccacctgcggcgcgcgaaacctggagcttg-ccgcgaacatcgg 750 |||||| |||||| |||||||||||||| || ||| |||| || | |||| | |||| Sbjct: 694 aaccaccgcgtcaccgccacctgcggcgcccgcaacatggacctcgtccgc-tccctcgg 752 Query: 751 cgccgacgaggcgctcgactacaagaccacggaaggcgcggcactgaagaact---cttc 807 ||||||||||| ||||||||||| ||| | ||||||| || |||| || || | || Sbjct: 753 cgccgacgaggtcctcgactacaataccccccaaggcgccgccctgacgagctcggcctc 812 Query: 808 cggcaagaagtacgactacatcgtcaacacc 838 || | ||||||||||||||||| |||||||| Sbjct: 813 cgacgagaagtacgactacatcatcaacacc 843 Score = 75.8 bits (38), Expect = 3e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 1029 ggaagctcaagacagtcgtcgactcgcgccatccattcgagaaggcagcagatgcgtggg 1088 ||||||||| ||| || ||||||||||| ||| ||||||||||| || || ||||||| Sbjct: 1037 ggaagctcaggacggtggtcgactcgcggtgtccgttcgagaaggcggcggaggcgtggg 1096 Query: 1089 aaaagagcttgagtggccatgcaacggggaaggtcatagttgagatgtga 1138 | |||||| || | |||||||| ||||| |||||||| || ||||||||| Sbjct: 1097 agaagagcatgggcggccatgccacgggtaaggtcatcgtggagatgtga 1146
>emb|CT836590.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA108D01, full insert sequence Length = 1247 Score = 105 bits (53), Expect = 4e-19 Identities = 174/211 (82%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 632 ctgatcaccgctgcgtccggcggtatcggctcgtacgccgtccagctcgctaagctcggg 691 |||||||||||||| |||||||| ||||| | ||||||||||||||||| |||||||| Sbjct: 597 ctgatcaccgctgcctccggcggcgtcggcacctacgccgtccagctcgccaagctcggc 656 Query: 692 aaccacaacgtcacggccacctgcggcgcgcgaaacctggagcttg-ccgcgaacatcgg 750 |||||| |||||| |||||||||||||| || ||| |||| || | |||| | |||| Sbjct: 657 aaccaccgcgtcaccgccacctgcggcgcccgcaacatggacctcgtccgc-tccctcgg 715 Query: 751 cgccgacgaggcgctcgactacaagaccacggaaggcgcggcactgaagaact---cttc 807 ||||||||||| ||||||||||| ||| | ||||||| || |||| || || | || Sbjct: 716 cgccgacgaggtcctcgactacaataccccccaaggcgccgccctgacgagctcggcctc 775 Query: 808 cggcaagaagtacgactacatcgtcaacacc 838 || | ||||||||||||||||| |||||||| Sbjct: 776 cgacgagaagtacgactacatcatcaacacc 806 Score = 77.8 bits (39), Expect = 9e-11 Identities = 165/207 (79%) Strand = Plus / Plus Query: 230 gtggagatccctgttccatcactgaagaaaggtgaagttcttataaaagttgaagcagca 289 ||||| ||||||||||| || |||||||| |||||||||||| |||| ||||| ||| Sbjct: 192 gtggaaatccctgttccttcggtgaagaaacatgaagttcttattaaaggcgaagctgca 251 Query: 290 agcatcaatccagccgattgccggatacagaaaggactgctacgtccttttgtcccgaag 349 ||| | || || ||||| | || |||||||| ||||||| || ||| | || ||| Sbjct: 252 agcgttaacccgattgattggagtattcagaaagggatgctacgcccatttcttcccaag 311 Query: 350 tttccatttattccagtaaccgacgttgctggagagatcgttgaggttggttctgcggtt 409 ||||||||||||||||| || || ||||| || ||||| || |||| ||||||||| || Sbjct: 312 tttccatttattccagtgactgatgttgccggggagattgtggaggctggttctgcagta 371 Query: 410 caagagttcaaagttggcgacagagtt 436 || ||| |||||||||| |||| |||| Sbjct: 372 catgagctcaaagttggtgacaaagtt 398 Score = 75.8 bits (38), Expect = 3e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 1029 ggaagctcaagacagtcgtcgactcgcgccatccattcgagaaggcagcagatgcgtggg 1088 ||||||||| ||| || ||||||||||| ||| ||||||||||| || || ||||||| Sbjct: 1000 ggaagctcaggacggtggtcgactcgcggtgtccgttcgagaaggcggcggaggcgtggg 1059 Query: 1089 aaaagagcttgagtggccatgcaacggggaaggtcatagttgagatgtga 1138 | |||||| || | |||||||| ||||| |||||||| || ||||||||| Sbjct: 1060 agaagagcatgggcggccatgccacgggtaaggtcatcgtggagatgtga 1109
>emb|AL662967.2|OSJN00166 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0034E24, complete sequence Length = 152220 Score = 105 bits (53), Expect = 4e-19 Identities = 174/211 (82%), Gaps = 5/211 (2%) Strand = Plus / Plus Query: 632 ctgatcaccgctgcgtccggcggtatcggctcgtacgccgtccagctcgctaagctcggg 691 |||||||||||||| |||||||| ||||| | ||||||||||||||||| |||||||| Sbjct: 13229 ctgatcaccgctgcctccggcggcgtcggcacctacgccgtccagctcgccaagctcggc 13288 Query: 692 aaccacaacgtcacggccacctgcggcgcgcgaaacctggagcttg-ccgcgaacatcgg 750 |||||| |||||| |||||||||||||| || ||| |||| || | |||| | |||| Sbjct: 13289 aaccaccgcgtcaccgccacctgcggcgcccgcaacatggacctcgtccgc-tccctcgg 13347 Query: 751 cgccgacgaggcgctcgactacaagaccacggaaggcgcggcactgaagaact---cttc 807 ||||||||||| ||||||||||| ||| | ||||||| || |||| || || | || Sbjct: 13348 cgccgacgaggtcctcgactacaataccccccaaggcgccgccctgacgagctcggcctc 13407 Query: 808 cggcaagaagtacgactacatcgtcaacacc 838 || | ||||||||||||||||| |||||||| Sbjct: 13408 cgacgagaagtacgactacatcatcaacacc 13438 Score = 75.8 bits (38), Expect = 3e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 1029 ggaagctcaagacagtcgtcgactcgcgccatccattcgagaaggcagcagatgcgtggg 1088 ||||||||| ||| || ||||||||||| ||| ||||||||||| || || ||||||| Sbjct: 13632 ggaagctcaggacggtggtcgactcgcggtgtccgttcgagaaggcggcggaggcgtggg 13691 Query: 1089 aaaagagcttgagtggccatgcaacggggaaggtcatagttgagatgtga 1138 | |||||| || | |||||||| ||||| |||||||| || ||||||||| Sbjct: 13692 agaagagcatgggcggccatgccacgggtaaggtcatcgtggagatgtga 13741 Score = 56.0 bits (28), Expect = 3e-04 Identities = 109/136 (80%) Strand = Plus / Plus Query: 230 gtggagatccctgttccatcactgaagaaaggtgaagttcttataaaagttgaagcagca 289 ||||| ||||||||||| || |||||||| |||||||||||| ||||| ||||| ||| Sbjct: 12170 gtggaaatccctgttccttcggtgaagaaacatgaagttcttattaaagtcgaagctgca 12229 Query: 290 agcatcaatccagccgattgccggatacagaaaggactgctacgtccttttgtcccgaag 349 ||| | || || ||||| | || |||||||| ||||||| || ||| | || ||| Sbjct: 12230 agcgttaacccgattgattggagtattcagaaagggatgctacgcccatttcttcccaag 12289 Query: 350 tttccatttattccag 365 |||||||||||||||| Sbjct: 12290 tttccatttattccag 12305 Score = 42.1 bits (21), Expect = 4.8 Identities = 66/81 (81%) Strand = Plus / Plus Query: 1058 catccattcgagaaggcagcagatgcgtgggaaaagagcttgagtggccatgcaacgggg 1117 |||||||||||| |||| || || ||||||| |||||| |||| |||||||| || Sbjct: 9727 catccattcgaggaggcggcggagccgtgggagaagagcaccggtggtcatgcaacacgg 9786 Query: 1118 aaggtcatagttgagatgtga 1138 |||||||| || ||||||||| Sbjct: 9787 aaggtcattgtggagatgtga 9807
>emb|CT831391.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA124K01, full insert sequence Length = 1314 Score = 56.0 bits (28), Expect = 3e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 747 tcggcgccgacgaggcgctcgactacaagacc 778 ||||||||||||||||||||||||||| |||| Sbjct: 751 tcggcgccgacgaggcgctcgactacaggacc 782 Score = 50.1 bits (25), Expect = 0.020 Identities = 55/65 (84%) Strand = Plus / Plus Query: 665 tacgccgtccagctcgctaagctcgggaaccacaacgtcacggccacctgcggcgcgcga 724 |||||||| |||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 666 tacgccgtgcagctcgccaagctcgccggcctccacgtcacggccacctgcggcgcccgc 725 Query: 725 aacct 729 ||||| Sbjct: 726 aacct 730
>ref|NM_001070127.1| Oryza sativa (japonica cultivar-group) Os09g0503100 (Os09g0503100) mRNA, complete cds Length = 1217 Score = 56.0 bits (28), Expect = 3e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 747 tcggcgccgacgaggcgctcgactacaagacc 778 ||||||||||||||||||||||||||| |||| Sbjct: 654 tcggcgccgacgaggcgctcgactacaggacc 685 Score = 50.1 bits (25), Expect = 0.020 Identities = 55/65 (84%) Strand = Plus / Plus Query: 665 tacgccgtccagctcgctaagctcgggaaccacaacgtcacggccacctgcggcgcgcga 724 |||||||| |||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 569 tacgccgttcagctcgccaagctcgccggcctccacgtcacggccacctgcggcgcccgc 628 Query: 725 aacct 729 ||||| Sbjct: 629 aacct 633
>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBb0004A05, complete sequence Length = 157913 Score = 56.0 bits (28), Expect = 3e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 747 tcggcgccgacgaggcgctcgactacaagacc 778 ||||||||||||||||||||||||||| |||| Sbjct: 109714 tcggcgccgacgaggcgctcgactacaggacc 109745 Score = 52.0 bits (26), Expect = 0.005 Identities = 29/30 (96%) Strand = Plus / Plus Query: 700 cgtcacggccacctgcggcgcgcgaaacct 729 |||||||||||||||||||||||| ||||| Sbjct: 104392 cgtcacggccacctgcggcgcgcgcaacct 104421 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 747 tcggcgccgacgaggcgctcgactac 772 |||||||||||||||||||||||||| Sbjct: 104442 tcggcgccgacgaggcgctcgactac 104467 Score = 50.1 bits (25), Expect = 0.020 Identities = 55/65 (84%) Strand = Plus / Plus Query: 665 tacgccgtccagctcgctaagctcgggaaccacaacgtcacggccacctgcggcgcgcga 724 |||||||| |||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 109629 tacgccgttcagctcgccaagctcgccggcctccacgtcacggccacctgcggcgcccgc 109688 Query: 725 aacct 729 ||||| Sbjct: 109689 aacct 109693
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 56.0 bits (28), Expect = 3e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 747 tcggcgccgacgaggcgctcgactacaagacc 778 ||||||||||||||||||||||||||| |||| Sbjct: 19178783 tcggcgccgacgaggcgctcgactacaggacc 19178814 Score = 52.0 bits (26), Expect = 0.005 Identities = 29/30 (96%) Strand = Plus / Plus Query: 700 cgtcacggccacctgcggcgcgcgaaacct 729 |||||||||||||||||||||||| ||||| Sbjct: 19173374 cgtcacggccacctgcggcgcgcgcaacct 19173403 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 747 tcggcgccgacgaggcgctcgactac 772 |||||||||||||||||||||||||| Sbjct: 19173424 tcggcgccgacgaggcgctcgactac 19173449 Score = 50.1 bits (25), Expect = 0.020 Identities = 55/65 (84%) Strand = Plus / Plus Query: 665 tacgccgtccagctcgctaagctcgggaaccacaacgtcacggccacctgcggcgcgcga 724 |||||||| |||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 19178698 tacgccgttcagctcgccaagctcgccggcctccacgtcacggccacctgcggcgcccgc 19178757 Query: 725 aacct 729 ||||| Sbjct: 19178758 aacct 19178762
>dbj|AK108272.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-C04, full insert sequence Length = 1217 Score = 56.0 bits (28), Expect = 3e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 747 tcggcgccgacgaggcgctcgactacaagacc 778 ||||||||||||||||||||||||||| |||| Sbjct: 654 tcggcgccgacgaggcgctcgactacaggacc 685 Score = 50.1 bits (25), Expect = 0.020 Identities = 55/65 (84%) Strand = Plus / Plus Query: 665 tacgccgtccagctcgctaagctcgggaaccacaacgtcacggccacctgcggcgcgcga 724 |||||||| |||||||| ||||||| || | |||||||||||||||||||||| || Sbjct: 569 tacgccgttcagctcgccaagctcgccggcctccacgtcacggccacctgcggcgcccgc 628 Query: 725 aacct 729 ||||| Sbjct: 629 aacct 633
>ref|NM_001070126.1| Oryza sativa (japonica cultivar-group) Os09g0503000 (Os09g0503000) mRNA, partial cds Length = 621 Score = 52.0 bits (26), Expect = 0.005 Identities = 29/30 (96%) Strand = Plus / Plus Query: 700 cgtcacggccacctgcggcgcgcgaaacct 729 |||||||||||||||||||||||| ||||| Sbjct: 64 cgtcacggccacctgcggcgcgcgcaacct 93 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 747 tcggcgccgacgaggcgctcgactac 772 |||||||||||||||||||||||||| Sbjct: 114 tcggcgccgacgaggcgctcgactac 139
>dbj|AK109203.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-C05, full insert sequence Length = 621 Score = 52.0 bits (26), Expect = 0.005 Identities = 29/30 (96%) Strand = Plus / Plus Query: 700 cgtcacggccacctgcggcgcgcgaaacct 729 |||||||||||||||||||||||| ||||| Sbjct: 64 cgtcacggccacctgcggcgcgcgcaacct 93 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 747 tcggcgccgacgaggcgctcgactac 772 |||||||||||||||||||||||||| Sbjct: 114 tcggcgccgacgaggcgctcgactac 139
>emb|BX828346.1|CNS0A30J Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH79ZA04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 984 Score = 50.1 bits (25), Expect = 0.020 Identities = 28/29 (96%) Strand = Plus / Plus Query: 374 gttgctggagagatcgttgaggttggttc 402 |||||||||||| |||||||||||||||| Sbjct: 151 gttgctggagaggtcgttgaggttggttc 179
>emb|CT829941.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA011A13, full insert sequence Length = 1370 Score = 48.1 bits (24), Expect = 0.078 Identities = 48/56 (85%) Strand = Plus / Plus Query: 665 tacgccgtccagctcgctaagctcgggaaccacaacgtcacggccacctgcggcgc 720 |||||||| ||||| || ||||| | ||||| | |||| ||||||||||||||||| Sbjct: 694 tacgccgtgcagctggccaagctggcgaacctccacgtgacggccacctgcggcgc 749
>emb|CR855125.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0140A01, complete sequence Length = 102692 Score = 48.1 bits (24), Expect = 0.078 Identities = 48/56 (85%) Strand = Plus / Plus Query: 665 tacgccgtccagctcgctaagctcgggaaccacaacgtcacggccacctgcggcgc 720 |||||||| ||||| || ||||| | ||||| | |||| ||||||||||||||||| Sbjct: 64697 tacgccgtgcagctggccaagctggcgaacctccacgtgacggccacctgcggcgc 64752
>emb|AL662979.3|OSJN00179 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0069D17, complete sequence Length = 147111 Score = 48.1 bits (24), Expect = 0.078 Identities = 45/52 (86%) Strand = Plus / Plus Query: 566 acggcgcttcaggccgtgagggccattggcaccaagttcgacggcacgggcg 617 |||||||| ||||| ||||| |||| ||| |||||||||||||||| |||| Sbjct: 17054 acggcgctgcaggcgctgaggtccatcggcgccaagttcgacggcaccggcg 17105 Score = 48.1 bits (24), Expect = 0.078 Identities = 48/56 (85%) Strand = Plus / Plus Query: 665 tacgccgtccagctcgctaagctcgggaaccacaacgtcacggccacctgcggcgc 720 |||||||| ||||| || ||||| | ||||| | |||| ||||||||||||||||| Sbjct: 17153 tacgccgtgcagctggccaagctggcgaacctccacgtgacggccacctgcggcgc 17208
>ref|NM_117370.2| Arabidopsis thaliana oxidoreductase/ zinc ion binding (AT4G13010) mRNA, complete cds Length = 1283 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 374 gttgctggagagatcgttgaggttgg 399 |||||||||||| ||||||||||||| Sbjct: 348 gttgctggagaggtcgttgaggttgg 373
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 829 cgtcaacaccacgaacggcggc 850 |||||||||||||||||||||| Sbjct: 271295 cgtcaacaccacgaacggcggc 271274
>gb|AF521665.1| Azoarcus sp. CIB anaerobic benzoate catabolism gene cluster, partial sequence Length = 19015 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 742 gaacatcggcgccgacgaggcg 763 |||||||||||||||||||||| Sbjct: 13076 gaacatcggcgccgacgaggcg 13097
>gb|AY117154.1| Arabidopsis thaliana unknown protein (At4g13010) mRNA, complete cds Length = 1021 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 374 gttgctggagagatcgttgaggttgg 399 |||||||||||| ||||||||||||| Sbjct: 217 gttgctggagaggtcgttgaggttgg 242
>gb|AY045857.1| Arabidopsis thaliana unknown protein (At4g13010) mRNA, complete cds Length = 1201 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 374 gttgctggagagatcgttgaggttgg 399 |||||||||||| ||||||||||||| Sbjct: 254 gttgctggagaggtcgttgaggttgg 279
>gb|AC091930.3| Homo sapiens chromosome 5 clone RP11-2A20, complete sequence Length = 167826 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 340 tgtcccgaagtttccatttatt 361 |||||||||||||||||||||| Sbjct: 87449 tgtcccgaagtttccatttatt 87428
>gb|AY056396.1| Arabidopsis thaliana AT4g13010/F25G13_100 mRNA, complete cds Length = 1249 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 374 gttgctggagagatcgttgaggttgg 399 |||||||||||| ||||||||||||| Sbjct: 348 gttgctggagaggtcgttgaggttgg 373
>gb|AF412068.1|AF412068 Arabidopsis thaliana AT4g13010/F25G13_100 mRNA, complete cds Length = 1198 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 374 gttgctggagagatcgttgaggttgg 399 |||||||||||| ||||||||||||| Sbjct: 263 gttgctggagaggtcgttgaggttgg 288
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 263 gaagttcttataaaagttgaag 284 |||||||||||||||||||||| Sbjct: 2546264 gaagttcttataaaagttgaag 2546285
>emb|AL161535.2|ATCHRIV35 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 35 Length = 199280 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 374 gttgctggagagatcgttgaggttgg 399 |||||||||||| ||||||||||||| Sbjct: 82738 gttgctggagaggtcgttgaggttgg 82763
>emb|AL079349.2|ATF25G13 Arabidopsis thaliana DNA chromosome 4, BAC clone F25G13, partial sequence (ESSA project) Length = 95009 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 374 gttgctggagagatcgttgaggttgg 399 |||||||||||| ||||||||||||| Sbjct: 53364 gttgctggagaggtcgttgaggttgg 53389
>gb|AC115050.23| Mus musculus chromosome 3, clone RP24-338K10, complete sequence Length = 163265 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 43 tgcagagttgcagacacccgcaagtt 68 ||||||||||||||||||| |||||| Sbjct: 77594 tgcagagttgcagacacccccaagtt 77619
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 263 gaagttcttataaaagttgaag 284 |||||||||||||||||||||| Sbjct: 2479019 gaagttcttataaaagttgaag 2479040
>emb|BX827188.1|CNS0A29O Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZA11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1135 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 374 gttgctggagagatcgttgaggttgg 399 |||||||||||| ||||||||||||| Sbjct: 236 gttgctggagaggtcgttgaggttgg 261
>emb|BX826784.1|CNS0A2B3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB63ZA09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1102 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 374 gttgctggagagatcgttgaggttgg 399 |||||||||||| ||||||||||||| Sbjct: 235 gttgctggagaggtcgttgaggttgg 260
>emb|AL929585.11| Mouse DNA sequence from clone RP23-97O7 on chromosome 4, complete sequence Length = 246011 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1230 tacatgtatttatacataaaat 1251 |||||||||||||||||||||| Sbjct: 215598 tacatgtatttatacataaaat 215619 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1230 tacatgtatttatacataaaat 1251 |||||||||||||||||||||| Sbjct: 215631 tacatgtatttatacataaaat 215652
>ref|XM_001085877.1| PREDICTED: Macaca mulatta ATPase, Class I, type 8B, member 2 (ATP8B2), mRNA Length = 3939 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 aaggtgaagttcttataaaag 278 ||||||||||||||||||||| Sbjct: 2879 aaggtgaagttcttataaaag 2859
>gb|CP000384.1| Mycobacterium sp. MCS, complete genome Length = 5705448 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 739 cgcgaacatcggcgccgacga 759 ||||||||||||||||||||| Sbjct: 3681387 cgcgaacatcggcgccgacga 3681367
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 618 tcggcagcaacatcctgatcaccgc 642 ||||| ||||||||||||||||||| Sbjct: 867001 tcggccgcaacatcctgatcaccgc 866977
>gb|AC153501.2| Mus musculus 10 BAC RP23-79J15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 251631 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1233 atgtatttatacataaaatta 1253 ||||||||||||||||||||| Sbjct: 103102 atgtatttatacataaaatta 103122
>gb|AC130200.30| Medicago truncatula clone mth1-64n13, complete sequence Length = 119506 Score = 42.1 bits (21), Expect = 4.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 254 aagaaaggtgaagttcttataaaag 278 |||||||||||||||||||| |||| Sbjct: 37829 aagaaaggtgaagttcttatgaaag 37805
>emb|AL929228.5| Mouse DNA sequence from clone RP23-359E23 on chromosome 2, complete sequence Length = 212717 Score = 42.1 bits (21), Expect = 4.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 taaacccagctccatccaaga 118 ||||||||||||||||||||| Sbjct: 138184 taaacccagctccatccaaga 138204 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 197,353,377 Number of extensions: 10455919 Number of successful extensions: 208009 Number of sequences better than 10.0: 44 Number of HSP's gapped: 207992 Number of HSP's successfully gapped: 163 Length of query: 1274 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1251 Effective length of database: 18,503,978,556 Effective search space: 23148477173556 Effective search space used: 23148477173556 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
