ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf96e13 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK111924:Os11g0497000 | 315 | 1e-85 | 2 | AK111781:Os11g0106400 | 87 | 3e-17 | 3 | AK111534:Os03g0820100 | 85 | 2e-16 | 4 | AK120544:Os03g0294900 | 81 | 3e-15 | 5 | AK074007:Os07g0692900 | 77 | 5e-14 | 6 | Os06g0251000:Os06g0251000 | 42 | 0.001 | 7 | AK110124: | 34 | 0.35 | 8 | AK101384:Os01g0271500 | 34 | 0.35 | 9 | AK062561:Os01g0271500 | 34 | 0.35 |
|---|
>AK111924:Os11g0497000 | Length = 328 Score = 315 bits (806), Expect = 1e-85 Identities = 152/181 (83%), Positives = 165/181 (91%) Frame = +3 Query: 564 YDRQIRVWGVDAQKRLSKAHVLVCGVNGTTIEFCKNIVLAGVGSLSLMDDHIVTEDDLSA 743 YDRQIRVWGVDAQKRLSKAHVLVCG+NGTT EFCKNIVLAGVGSLSLMDDH+VTEDDL+A Sbjct: 19 YDRQIRVWGVDAQKRLSKAHVLVCGMNGTTTEFCKNIVLAGVGSLSLMDDHLVTEDDLNA 78 Query: 744 NFLIPHDESMHGGCSRAEACCESLKDFNPMVRVAVAKGDPSVIDEGFIDSFDIIVVSCTS 923 NFLIPHDES++GG SRAE CCESLKDFNPMVRVAV KGDPS+ID F+D FDIIVVSC Sbjct: 79 NFLIPHDESIYGGRSRAEVCCESLKDFNPMVRVAVEKGDPSLIDGEFLDKFDIIVVSCAP 138 Query: 924 LKTKLFINDNCRKRSKRIAFYSVECKDSCGEIFVDLQNHSYLQKKPGGEPEQQELTYASL 1103 +KTKL INDNCRKRSK IAFY++ECKDSCGEIFVDLQNHSY+Q K GGEP+ +EL Y SL Sbjct: 139 IKTKLLINDNCRKRSKHIAFYAIECKDSCGEIFVDLQNHSYVQ-KVGGEPKPKELAYPSL 197 Query: 1104 Q 1106 Q Sbjct: 198 Q 198 Score = 128 bits (321), Expect(2) = 7e-44 Identities = 62/73 (84%), Positives = 66/73 (90%) Frame = +1 Query: 1627 CKLQSLSESQIPTALLERLLAAGKKEHPPVCAILGGILGQEVIKSISCKGDTIKSFFYFD 1806 C SLSESQIPTALLERLLAAGKK+HPPVCAILGGILGQEVIKSIS KGD IK+FFY+D Sbjct: 252 CDKMSLSESQIPTALLERLLAAGKKQHPPVCAILGGILGQEVIKSISGKGDPIKNFFYYD 311 Query: 1807 TADGKGVMEDIPP 1845 ADGKG+ EDIPP Sbjct: 312 AADGKGIAEDIPP 324 Score = 69.3 bits (168), Expect(2) = 7e-44 Identities = 31/36 (86%), Positives = 35/36 (97%) Frame = +2 Query: 1499 IQEAISVPWKNLPKKTTKLYYAMRVLESYELSEGRN 1606 +QEAISVPWKNLP+KTTKLY+AMRVLE+YE SEGRN Sbjct: 197 LQEAISVPWKNLPRKTTKLYFAMRVLENYESSEGRN 232
>AK111781:Os11g0106400 | Length = 1048 Score = 87.4 bits (215), Expect = 3e-17 Identities = 55/170 (32%), Positives = 87/170 (51%) Frame = +3 Query: 564 YDRQIRVWGVDAQKRLSKAHVLVCGVNGTTIEFCKNIVLAGVGSLSLMDDHIVTEDDLSA 743 + RQ+ V+G + KRL ++VLV G+NG E KN+VLAGV S++L DD V DLS+ Sbjct: 46 HSRQLAVYGRETMKRLFASNVLVSGLNGLGAEIAKNLVLAGVKSVNLHDDDNVELWDLSS 105 Query: 744 NFLIPHDESMHGGCSRAEACCESLKDFNPMVRVAVAKGDPSVIDEGFIDSFDIIVVSCTS 923 NF + + G +RA+ C + L++ N V ++ GD + + + +F +V + S Sbjct: 106 NFFLTEKDV---GQNRAQTCVQKLQELNNAVIISTITGD---LTKEQLSNFQAVVFTDIS 159 Query: 924 LKTKLFINDNCRKRSKRIAFYSVECKDSCGEIFVDLQNHSYLQKKPGGEP 1073 L+ + + C IAF E + G +F D + G EP Sbjct: 160 LEKAVEFDSYCHNHQPPIAFIKSEIRGLFGSVFCDFGPEFTVLDVDGEEP 209 Score = 59.7 bits (143), Expect = 8e-09 Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 10/141 (7%) Frame = +3 Query: 564 YDRQIRVWGVDAQKRLSKAHVLVCGVNGTTIEFCKNIVLAGV-----GSLSLMDDHIVTE 728 YD QI V+G + QK+L +A + + G EF KN+ L G+ G L + DD ++ + Sbjct: 443 YDAQISVFGSNLQKKLEQAKIFMVGSGALGCEFLKNLALMGISCNQNGKLIVTDDDVIEK 502 Query: 729 DDLSANFLIPHDESMHGGCSRAEACCESLKDFNPMVRVAVAKGDPS-----VIDEGFIDS 893 +LS FL + G ++ + NP + V + S V ++ F +S Sbjct: 503 SNLSRQFLF---RDWNIGQPKSTVAATAAMAINPKLHVEALQNRASPETENVFNDAFWES 559 Query: 894 FDIIVVSCTSLKTKLFINDNC 956 D +V + ++ +++I+ C Sbjct: 560 LDAVVNALDNVTARMYIDSRC 580 Score = 44.7 bits (104), Expect = 3e-04 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%) Frame = +1 Query: 1636 QSLSES---QIPTALLERLLAAGKKEHPPVCAILGGILGQEVIKSISCKGDTIKSFFYFD 1806 +SL +S ++ LL + + P+ A+ GGI+GQEV+K+ S K + FFYFD Sbjct: 362 ESLGDSKLEELDKKLLHHFASGSRAVLNPMAAMFGGIVGQEVVKACSGKFHPLYQFFYFD 421 Query: 1807 TADGKGVMEDIPPTPVE 1857 + +E +P P+E Sbjct: 422 S------VESLPVEPLE 432
>AK111534:Os03g0820100 | Length = 531 Score = 85.1 bits (209), Expect = 2e-16 Identities = 52/171 (30%), Positives = 89/171 (52%), Gaps = 5/171 (2%) Frame = +3 Query: 564 YDRQIRVWGVDAQKRLSKAHV--LVCGVNGTTIEFCKNIVLAGVGSLSLMDDHIVTEDDL 737 YDRQ+R+WG Q L KA + L CG GT E KN+VL GVGS++++D V + D+ Sbjct: 16 YDRQLRIWGDQGQAALEKASICLLTCGPTGT--EAMKNLVLGGVGSVTVVDGSKVEQSDM 73 Query: 738 SANFLIPHDESMHGGCSRAEACCESLKDFNPMVRVAVAKGDPSVI---DEGFIDSFDIIV 908 NFL+ ++ G SRA++ C L++ N V + P + + F F +++ Sbjct: 74 GNNFLL---DAECLGQSRAKSVCSFLQELNDAVNAKFVEESPLALIDTNPSFFSQFTVVI 130 Query: 909 VSCTSLKTKLFINDNCRKRSKRIAFYSVECKDSCGEIFVDLQNHSYLQKKP 1061 + ++ L ++D CRK + I + G + + ++ H+ ++ KP Sbjct: 131 ATQLPERSLLKLDDICRKAN--IVLVAARSYGLTGLVRISVKEHNVIESKP 179 Score = 31.2 bits (69), Expect = 2.9 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = +1 Query: 1669 LLERLLAAGKKEHPPVCAILGGILGQEVIKSISCKGDTIKSFFYFDTADGK 1821 L+ + G E PV A +GG+ QEVIK ++ + + F F+ D K Sbjct: 475 LITEMCRFGGAEIHPVAAFIGGVASQEVIKLVTKQFVPLLGTFIFNGIDHK 525
>AK120544:Os03g0294900 | Length = 1064 Score = 80.9 bits (198), Expect = 3e-15 Identities = 54/170 (31%), Positives = 80/170 (47%) Frame = +3 Query: 564 YDRQIRVWGVDAQKRLSKAHVLVCGVNGTTIEFCKNIVLAGVGSLSLMDDHIVTEDDLSA 743 + RQ+ V+G + +RL ++VLV G+NG E KN+ LAGV S++L D V DLS Sbjct: 62 HSRQLAVYGRETMRRLFASNVLVSGLNGLGAEIAKNLALAGVKSITLHDMGNVEMWDLSG 121 Query: 744 NFLIPHDESMHGGCSRAEACCESLKDFNPMVRVAVAKGDPSVIDEGFIDSFDIIVVSCTS 923 NF + D+ G +RA AC L++ N V ++ D + + F +V + S Sbjct: 122 NFFLSEDDI---GKNRAVACTAKLQELNNAVLISTLTED---LTNEHLSKFQAVVFTDIS 175 Query: 924 LKTKLFINDNCRKRSKRIAFYSVECKDSCGEIFVDLQNHSYLQKKPGGEP 1073 L +D CR I+F E G +F D + G EP Sbjct: 176 LDKAFEFDDYCRNHQPSISFIKAEVCGLFGSVFCDFGPKFTVLDVDGEEP 225 Score = 55.5 bits (132), Expect = 1e-07 Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 8/139 (5%) Frame = +3 Query: 564 YDRQIRVWGVDAQKRLSKAHVLVCGVNGTTIEFCKNIVLAGV-----GSLSLMDDHIVTE 728 YD QI V+G QK++ A+V V G EF KN+ L GV G L++ DD I+ + Sbjct: 459 YDAQISVFGSKLQKKMRDANVFVVGSGALGCEFLKNLALMGVSCGLKGKLTITDDDIIEK 518 Query: 729 DDLSANFLIPHDESMHGGCSRAEACCESLKDFNPMVRVAVAKGDPS---VIDEGFIDSFD 899 +LS FL D ++ S A S + + + + P V + F + D Sbjct: 519 SNLSRQFLF-RDWNIGQAKSTVAAAAASAINSSLHINALQNRACPETEHVFHDKFWEGLD 577 Query: 900 IIVVSCTSLKTKLFINDNC 956 +I+ + ++ +++++ C Sbjct: 578 VIINALDNVNARMYMDMRC 596 Score = 41.6 bits (96), Expect = 0.002 Identities = 23/63 (36%), Positives = 34/63 (53%) Frame = +1 Query: 1669 LLERLLAAGKKEHPPVCAILGGILGQEVIKSISCKGDTIKSFFYFDTADGKGVMEDIPPT 1848 LL + + P+ A+ GGI+GQEV+K+ S K FFYFD+A E +P Sbjct: 392 LLRNFASGSRAVLNPMAAMFGGIVGQEVVKACSGKFHPQYQFFYFDSA------ESLPTY 445 Query: 1849 PVE 1857 P++ Sbjct: 446 PLD 448
>AK074007:Os07g0692900 | Length = 1045 Score = 77.0 bits (188), Expect = 5e-14 Identities = 50/155 (32%), Positives = 75/155 (48%) Frame = +3 Query: 564 YDRQIRVWGVDAQKRLSKAHVLVCGVNGTTIEFCKNIVLAGVGSLSLMDDHIVTEDDLSA 743 + RQ+ V+G + +RL +HVLV G+NG E KN+ LAGV S++L D V DLSA Sbjct: 43 HSRQLAVYGRETMRRLFASHVLVSGLNGLGAEIAKNLALAGVKSVTLHDVKNVEMWDLSA 102 Query: 744 NFLIPHDESMHGGCSRAEACCESLKDFNPMVRVAVAKGDPSVIDEGFIDSFDIIVVSCTS 923 NF + ++ G +RA AC L++ N V V+ + + + F +V + Sbjct: 103 NFFLSENDI---GKNRAAACVSKLQELNNAVLVSALTEE---LTTDHLSKFQAVVFTDIG 156 Query: 924 LKTKLFINDNCRKRSKRIAFYSVECKDSCGEIFVD 1028 L +D C I+F E G +F D Sbjct: 157 LDKAYEFDDYCHSHCPPISFIKAEVCGLFGTVFCD 191 Score = 57.0 bits (136), Expect = 5e-08 Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 8/139 (5%) Frame = +3 Query: 564 YDRQIRVWGVDAQKRLSKAHVLVCGVNGTTIEFCKNIVLAGV-----GSLSLMDDHIVTE 728 YD QI V+G QK+L +A+ V G EF KN+ L GV G L++ DD ++ + Sbjct: 440 YDAQISVFGSKLQKKLEEANTFVVGSGALGCEFLKNLALMGVSCSPKGKLTITDDDVIEK 499 Query: 729 DDLSANFLIPHDESMHGGCSRAEACCESLKDFNPMVRVAVAKGDP---SVIDEGFIDSFD 899 +LS FL D ++ S A S + N + + P +V + F + D Sbjct: 500 SNLSRQFLF-RDWNIRQAKSTVAAAAASAINPNLCIDALQNRACPDTENVFHDTFWEGLD 558 Query: 900 IIVVSCTSLKTKLFINDNC 956 +++ + ++ +++++ C Sbjct: 559 VVINALDNVNARMYMDMRC 577 Score = 42.4 bits (98), Expect = 0.001 Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 4/90 (4%) Frame = +1 Query: 1600 AQS*YVSCCCKL-QSLSESQIPTA---LLERLLAAGKKEHPPVCAILGGILGQEVIKSIS 1767 AQS ++ C + ++L++ ++ T L + + P+ A+ GGI+GQEV+K+ S Sbjct: 347 AQS-FLKCAADINEALTDHKLDTIDEKLFRHFASGSRAVLNPMAAMFGGIVGQEVVKACS 405 Query: 1768 CKGDTIKSFFYFDTADGKGVMEDIPPTPVE 1857 K + FFYFD+ +E +P P++ Sbjct: 406 GKFHPLYQFFYFDS------VESLPTYPLD 429
>Os06g0251000:Os06g0251000 | Length = 477 Score = 42.4 bits (98), Expect = 0.001 Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 2/138 (1%) Frame = +3 Query: 570 RQIRVWGVDAQKRLSKAHVLVCGVNGTTIEFCKNIVLAGVGSLSLMDDHIVTEDDLSANF 749 R I+ +G+++QK+++ + V+V G+ G ++ +GVG L L+D V+ L+ + Sbjct: 80 RNIQFFGMESQKKVTGSFVVVIGLGGVGSHAASMLLRSGVGRLLLVDFDQVSLSSLNRHA 139 Query: 750 LIPHDESMHGGCSRAEACCESLKDFNP--MVRVAVAKGDPSVIDEGFIDSFDIIVVSCTS 923 + D+ G +A + P + V DPS DE D ++ + Sbjct: 140 VATRDDV---GTPKALCLKKHFSMIYPECQIEAKVQLYDPSCEDEILSGQPDFVLDCIDN 196 Query: 924 LKTKLFINDNCRKRSKRI 977 + TK+ + C +R R+ Sbjct: 197 IDTKVALLAACVRRGLRV 214
>AK110124: | Length = 831 Score = 34.3 bits (77), Expect = 0.35 Identities = 18/72 (25%), Positives = 36/72 (50%) Frame = +1 Query: 1651 SQIPTALLERLLAAGKKEHPPVCAILGGILGQEVIKSISCKGDTIKSFFYFDTADGKGVM 1830 + +P ++ L + + P+ A +GG + QEV+K+ S K + Y D+ + + Sbjct: 154 ADLPENVVRELAFQAQGDVSPMVAYVGGFVAQEVLKACSGKFHPLVQHLYVDSLE--SLP 211 Query: 1831 EDIPPTPVEQFA 1866 + +P P +FA Sbjct: 212 DSVPGLPESEFA 223
>AK101384:Os01g0271500 | Length = 451 Score = 34.3 bits (77), Expect = 0.35 Identities = 27/112 (24%), Positives = 49/112 (43%) Frame = +3 Query: 612 SKAHVLVCGVNGTTIEFCKNIVLAGVGSLSLMDDHIVTEDDLSANFLIPHDESMHGGCSR 791 S VLV G G E K++ L+G ++ ++D + +L+ FL + G S+ Sbjct: 45 SLVEVLVVGAGGLGCELLKDLALSGFKNIHVIDMDTIDVSNLNRQFLFRVQDV---GKSK 101 Query: 792 AEACCESLKDFNPMVRVAVAKGDPSVIDEGFIDSFDIIVVSCTSLKTKLFIN 947 AE + + + V + + F F IIV+ S++ + +IN Sbjct: 102 AEVAAKRVMERVSGVNIVPHFCRIEDKEIEFYSQFSIIVLGLDSIEARSYIN 153
>AK062561:Os01g0271500 | Length = 451 Score = 34.3 bits (77), Expect = 0.35 Identities = 27/112 (24%), Positives = 49/112 (43%) Frame = +3 Query: 612 SKAHVLVCGVNGTTIEFCKNIVLAGVGSLSLMDDHIVTEDDLSANFLIPHDESMHGGCSR 791 S VLV G G E K++ L+G ++ ++D + +L+ FL + G S+ Sbjct: 45 SLVEVLVVGAGGLGCELLKDLALSGFKNIHVIDMDTIDVSNLNRQFLFRVQDV---GKSK 101 Query: 792 AEACCESLKDFNPMVRVAVAKGDPSVIDEGFIDSFDIIVVSCTSLKTKLFIN 947 AE + + + V + + F F IIV+ S++ + +IN Sbjct: 102 AEVAAKRVMERVSGVNIVPHFCRIEDKEIEFYSQFSIIVLGLDSIEARSYIN 153 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 57,155,765 Number of extensions: 1274095 Number of successful extensions: 3117 Number of sequences better than 10.0: 9 Number of HSP's gapped: 3114 Number of HSP's successfully gapped: 18 Length of query: 693 Length of database: 15,399,855 Length adjustment: 108 Effective length of query: 585 Effective length of database: 11,075,427 Effective search space: 6479124795 Effective search space used: 6479124795 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
