ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf96e01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK072793:Os05g0270000 99 2e-21
2Os01g0593500:Os01g0593500 97 5e-21
3AK071403:Os03g0612600 49 1e-07
4Os11g0120700:Os11g0120700 29 2.0
5AK073989:Os01g0629900 28 2.6
6AK065930:Os01g0629900 28 2.6
7AK062211:Os01g0629900 28 2.6
8Os02g0185500:Os02g0185500 28 4.5
9AK108697:Os06g0671300 27 5.9
10AK103389:Os12g0120500 27 5.9
11Os01g0753000:Os01g0753000 27 7.7

>AK072793:Os05g0270000 |
          Length = 265
 Score = 98.6 bits (244), Expect = 2e-21
 Identities = 41/90 (45%), Positives = 67/90 (74%)
 Frame = +1

Query: 7   MLKVNLPVVFKGEDVCPGLKKGGFLQKIRTSLVYLCPAEHIPPKIEVDLTNVDIGDRVLM 186
           +LK+++P++F G+D  PGL+KG +   I+ ++ YLCPA+ +PP IEVDL+ +D+G ++LM
Sbjct: 172 LLKIDVPLMFIGDDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVDLSELDVGQKLLM 231

Query: 187 QDIPVHPSLKLLSKNETMPVCKVLSSKPAE 276
           +D+ VHP+LKLL   E  P+C ++ S+  E
Sbjct: 232 RDLKVHPALKLLQSPE-QPICSIIGSRAPE 260



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>Os01g0593500:Os01g0593500 |
          Length = 271

 Score = 97.4 bits (241), Expect = 5e-21
 Identities = 40/87 (45%), Positives = 66/87 (75%)
 Frame = +1

Query: 7   MLKVNLPVVFKGEDVCPGLKKGGFLQKIRTSLVYLCPAEHIPPKIEVDLTNVDIGDRVLM 186
           +LK+++P++F GED  PGL+KG +   I+ ++ YLCPA+ +PP IEVDL+ +D+G ++LM
Sbjct: 178 LLKIDVPLMFIGEDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVDLSELDVGQKLLM 237

Query: 187 QDIPVHPSLKLLSKNETMPVCKVLSSK 267
           +D+ VHP+L+LL   E  P+C ++ S+
Sbjct: 238 RDLKVHPALRLLQSPE-QPICSIIGSR 263



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>AK071403:Os03g0612600 |
          Length = 175

 Score = 49.3 bits (116), Expect(2) = 1e-07
 Identities = 22/23 (95%), Positives = 22/23 (95%)
 Frame = +1

Query: 1   GTMLKVNLPVVFKGEDVCPGLKK 69
           GTMLKVNLPV FKGEDVCPGLKK
Sbjct: 141 GTMLKVNLPVEFKGEDVCPGLKK 163



 Score = 23.1 bits (48), Expect(2) = 1e-07
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +3

Query: 84  ENQDQFGVSLP 116
           EN+DQ GVSLP
Sbjct: 164 ENKDQLGVSLP 174



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>Os11g0120700:Os11g0120700 |
          Length = 302

 Score = 28.9 bits (63), Expect = 2.0
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -2

Query: 274 RLAWRTGPYRRASSRFYSVT*AMDGRGCPALTLYPQ 167
           +LA+R   Y R    F      MDG G P L+L PQ
Sbjct: 55  KLAFRVDNYSRRRKAFAGDLLLMDGHGTPLLSLRPQ 90



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>AK073989:Os01g0629900 |
          Length = 352

 Score = 28.5 bits (62), Expect = 2.6
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = +1

Query: 163 DIGDRVLMQDIPVHPSLKLLSKNETMPVCKVLSSKPAE*ERRAV 294
           D  DR   ++   HP  K L+K E  P C+ ++    E ERR V
Sbjct: 41  DPKDRPTAEEALAHPYFKGLAKVEREPSCQPITKMEFEFERRRV 84



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>AK065930:Os01g0629900 |
          Length = 611

 Score = 28.5 bits (62), Expect = 2.6
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = +1

Query: 163 DIGDRVLMQDIPVHPSLKLLSKNETMPVCKVLSSKPAE*ERRAV 294
           D  DR   ++   HP  K L+K E  P C+ ++    E ERR V
Sbjct: 300 DPKDRPTAEEALAHPYFKGLAKVEREPSCQPITKMEFEFERRRV 343



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>AK062211:Os01g0629900 |
          Length = 313

 Score = 28.5 bits (62), Expect = 2.6
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = +1

Query: 163 DIGDRVLMQDIPVHPSLKLLSKNETMPVCKVLSSKPAE*ERRAV 294
           D  DR   ++   HP  K L+K E  P C+ ++    E ERR V
Sbjct: 2   DPKDRPTAEEALAHPYFKGLAKVEREPSCQPITKMEFEFERRRV 45



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>Os02g0185500:Os02g0185500 |
          Length = 409

 Score = 27.7 bits (60), Expect = 4.5
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +1

Query: 142 EVDLTNVDIGDRVLMQDIPVHPSLKLLSKNETMPVCKVL 258
           E DLTN+     V+ + + +HP L LL   E    C V+
Sbjct: 357 EDDLTNLKYLKLVIKETLRLHPVLPLLLPRECREACNVI 395



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>AK108697:Os06g0671300 |
          Length = 387

 Score = 27.3 bits (59), Expect = 5.9
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +1

Query: 142 EVDLTNVDIGDRVLMQDIPVHPSLKLLSKNETMPVCKVL 258
           E DL N+     ++ + + +HP   LL   E    CK+L
Sbjct: 224 EDDLINLSYPKNIIKETLRLHPVAPLLMPKECQESCKIL 262



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>AK103389:Os12g0120500 |
          Length = 228

 Score = 27.3 bits (59), Expect = 5.9
 Identities = 15/35 (42%), Positives = 16/35 (45%)
 Frame = -2

Query: 271 LAWRTGPYRRASSRFYSVT*AMDGRGCPALTLYPQ 167
           LA+R   Y R    F      MDG G P L L PQ
Sbjct: 53  LAFRVDNYSRRRKLFSGDLLLMDGHGSPLLALTPQ 87



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>Os01g0753000:Os01g0753000 |
          Length = 617

 Score = 26.9 bits (58), Expect = 7.7
 Identities = 16/62 (25%), Positives = 23/62 (37%)
 Frame = -2

Query: 190 PALTLYPQCQHL*GPPRFLEGCARPGRDTPNWS*FSARTHLSLTQGRHPPP*TLRANSPS 11
           PA  L P+C         L  C RP + +  W  + +  H  L      PP T+    P 
Sbjct: 320 PAAFLRPKCA--------LWDCPRPAQGSERWQDYCSMYHADLAVKEEGPPGTMPVIRPR 371

Query: 10  AL 5
            +
Sbjct: 372 GI 373


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 16,733,061
Number of extensions: 425826
Number of successful extensions: 964
Number of sequences better than 10.0: 11
Number of HSP's gapped: 964
Number of HSP's successfully gapped: 12
Length of query: 170
Length of database: 15,399,855
Length adjustment: 93
Effective length of query: 77
Effective length of database: 11,676,042
Effective search space: 899055234
Effective search space used: 899055234
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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