ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf96e01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ245778.1| Zea mays clone 20273 mRNA sequence 648 0.0
2gb|AY107219.1| Zea mays PCO090715 mRNA sequence 184 2e-43
3gb|AC136972.3| Oryza sativa chromosome 3 BAC OSJNBb0007E22 genom... 178 1e-41
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
5ref|NM_001057192.1| Oryza sativa (japonica cultivar-group) Os03g... 170 3e-39
6dbj|AK071403.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 8e-37
7ref|NM_001076961.1| Bos taurus C4orf32 homolog (C4orf32), mRNA >... 42 1.9
8emb|CR855226.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 7.5
9gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete s... 40 7.5
10emb|CT025694.11| Mouse DNA sequence from clone RP24-66N5 on chro... 40 7.5
11gb|AC146098.3| Pan troglodytes BAC clone RP43-51J12 from 7, comp... 40 7.5
12gb|AC154644.2| Mus musculus BAC clone RP23-278G20 from chromosom... 40 7.5
13gb|AC093536.4| Homo sapiens chromosome 16 clone RP11-744D14, com... 40 7.5
14gb|AC096752.4| Homo sapiens BAC clone RP11-454E2 from 7, complet... 40 7.5
15gb|AC024382.7| Homo sapiens chromosome 8, clone RP11-351C8, comp... 40 7.5
16gb|AC163436.3| Mus musculus chromosome 1, clone RP23-102H12, com... 40 7.5
17gb|AC091226.3| Drosophila melanogaster 3L BAC RP98-3I13 (Roswell... 40 7.5
18gb|AC069405.6| Drosophila melanogaster 3L BAC RP98-17J20 (Roswel... 40 7.5
19emb|CR925840.6| Zebrafish DNA sequence from clone DKEYP-52F9 in ... 40 7.5
20gb|AC116663.1| Rattus norvegicus, clone RP31-109I17, complete se... 40 7.5
21gb|AC016816.5| Homo sapiens chromosome 10 clone RP11-113P9, comp... 40 7.5
22gb|AC027669.11| Homo sapiens chromosome 10 clone RP11-165N2, com... 40 7.5
23dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
24emb|AL078639.5|HSDJ177G6 Human DNA sequence from clone RP1-177G6... 40 7.5
25emb|CR392045.5| Zebrafish DNA sequence from clone DKEY-167C9 in ... 40 7.5
26gb|AC154419.2| Mus musculus BAC clone RP24-212C1 from chromosome... 40 7.5
27emb|AL662792.21| Mouse DNA sequence from clone RP23-52L14 on chr... 40 7.5
28emb|CR628311.1| Human DNA sequence from clone XX-NCIH2171_5AD01,... 40 7.5
29gb|AC102900.12| Mus musculus chromosome 1, clone RP24-315J13, co... 40 7.5
30emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4,... 40 7.5 
>gb|DQ245778.1| Zea mays clone 20273 mRNA sequence
          Length = 1002
 Score =  648 bits (327), Expect = 0.0
 Identities = 417/446 (93%), Gaps = 7/446 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggaacaatgctgaaggtgaatttgcccgtagtgttcaagggggaggatgtctgccctggg 60
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 458 ggaacaatgctgaaggtgaatttgcccgtagtgttcaaaggggaggatgtctgccctggg 517

                                                                       
Query: 61  ttaaagaaaggtgggttcttgcagaaaatcaggaccagtttggtgtatctctgcccggcc 120
           |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| 
Sbjct: 518 ttaaagaaaggtggcttcttgcagaaaatcaggaccagcttggtgtatctctgcccggcg 577

                                                                       
Query: 121 gagcacatccctccaaaaatcgaggtggacctcacaaatgttgacattggggatagagtg 180
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 578 gagcacatccctccaaaaatcgaggtggacctgacaaatgttgacattggggatagagtg 637

                                                                       
Query: 181 ttaatgcaggacatccccgtccatccatcgctcaagttactgagtaaaaacgagacgatg 240
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 ttaatgcaggacatccctgtccatccatcgctcaagttactgagtaaaaacgagacgatg 697

                                                                       
Query: 241 cccgtctgtaaggtcctgtcctccaagccagccgagtaggaacgccgtgccgtgcgaccg 300
           |||||||| ||||||||||||||||||||||||||||||||||      |||||||||| 
Sbjct: 698 cccgtctgcaaggtcctgtcctccaagccagccgagtaggaac-----cccgtgcgacca 752

                                                                       
Query: 301 tctagagctggacacacctacctacaataggtggtacatcggcctgaaaatttaatccct 360
            ||||||||||| |||||| ||||| ||||||||||| ||||||| | ||||||||||||
Sbjct: 753 cctagagctggagacacctgcctaccataggtggtacgtcggcctaagaatttaatccct 812

                                                                       
Query: 361 ctatctgctttgccttttggtacctagttgctatgctccagtttgctcatagtagattca 420
           |||| |||||   ||||||||| ||| |||||| |||||| |||||||||||||||||||
Sbjct: 813 ctatgtgctt--gcttttggtatctacttgctaggctccattttgctcatagtagattca 870

                                     
Query: 421 aacaagtttattgtgttcaagatacg 446
           ||||||||||||||||||||||||||
Sbjct: 871 aacaagtttattgtgttcaagatacg 896
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>gb|AY107219.1| Zea mays PCO090715 mRNA sequence
          Length = 560

 Score =  184 bits (93), Expect = 2e-43
 Identities = 159/181 (87%)
 Strand = Plus / Minus

                                                                       
Query: 101 tggtgtatctctgcccggccgagcacatccctccaaaaatcgaggtggacctcacaaatg 160
           |||||||||||||||| || |||||||||||||||||||| ||||||||||| |||||| 
Sbjct: 557 tggtgtatctctgcccagctgagcacatccctccaaaaattgaggtggacctgacaaatc 498

                                                                       
Query: 161 ttgacattggggatagagtgttaatgcaggacatccccgtccatccatcgctcaagttac 220
           ||||  | || ||||| || || ||||| ||||| ||||||||||||||||||||||| |
Sbjct: 497 ttgatgtcggagatagggtattgatgcatgacattcccgtccatccatcgctcaagttgc 438

                                                                       
Query: 221 tgagtaaaaacgagacgatgcccgtctgtaaggtcctgtcctccaagccagccgagtagg 280
           |||||||||||||||| ||||||||||| ||| || || |||| ||||||| ||||||||
Sbjct: 437 tgagtaaaaacgagaccatgcccgtctgcaagatcttggcctcaaagccagacgagtagg 378

            
Query: 281 a 281
           |
Sbjct: 377 a 377
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>gb|AC136972.3| Oryza sativa chromosome 3 BAC OSJNBb0007E22 genomic sequence, complete
              sequence
          Length = 184783

 Score =  178 bits (90), Expect = 1e-41
 Identities = 150/170 (88%)
 Strand = Plus / Minus

                                                                          
Query: 79     ttgcagaaaatcaggaccagtttggtgtatctctgcccggccgagcacatccctccaaaa 138
              ||||||||||| |||||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct: 146339 ttgcagaaaataaggaccagcttggtgtatctctgccctgctgagcacatccctccaaaa 146280

                                                                          
Query: 139    atcgaggtggacctcacaaatgttgacattggggatagagtgttaatgcaggacatcccc 198
              || |||||||||||  ||||| |||||||||| ||||| || | |||| | |||||||||
Sbjct: 146279 attgaggtggacctggcaaatcttgacattggagatagggtatcaatgaatgacatcccc 146220

                                                                
Query: 199    gtccatccatcgctcaagttactgagtaaaaacgagacgatgcccgtctg 248
              |||||||| ||| | | ||||||||||||||||||||| ||||| |||||
Sbjct: 146219 gtccatccgtcgttgaggttactgagtaaaaacgagaccatgcctgtctg 146170



 Score =  103 bits (52), Expect = 6e-19
 Identities = 67/72 (93%)
 Strand = Plus / Minus

                                                                          
Query: 1      ggaacaatgctgaaggtgaatttgcccgtagtgttcaagggggaggatgtctgccctggg 60
              |||||||||||||||||||| ||||| |||| ||||||||||||||| ||||||||||||
Sbjct: 149636 ggaacaatgctgaaggtgaacttgcctgtagagttcaagggggaggacgtctgccctggg 149577

                          
Query: 61     ttaaagaaaggt 72
              || |||||||||
Sbjct: 149576 ttgaagaaaggt 149565
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  178 bits (90), Expect = 1e-41
 Identities = 150/170 (88%)
 Strand = Plus / Minus

                                                                            
Query: 79       ttgcagaaaatcaggaccagtttggtgtatctctgcccggccgagcacatccctccaaaa 138
                ||||||||||| |||||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct: 22936837 ttgcagaaaataaggaccagcttggtgtatctctgccctgctgagcacatccctccaaaa 22936778

                                                                            
Query: 139      atcgaggtggacctcacaaatgttgacattggggatagagtgttaatgcaggacatcccc 198
                || |||||||||||  ||||| |||||||||| ||||| || | |||| | |||||||||
Sbjct: 22936777 attgaggtggacctggcaaatcttgacattggagatagggtatcaatgaatgacatcccc 22936718

                                                                  
Query: 199      gtccatccatcgctcaagttactgagtaaaaacgagacgatgcccgtctg 248
                |||||||| ||| | | ||||||||||||||||||||| ||||| |||||
Sbjct: 22936717 gtccatccgtcgttgaggttactgagtaaaaacgagaccatgcctgtctg 22936668



 Score =  103 bits (52), Expect = 6e-19
 Identities = 67/72 (93%)
 Strand = Plus / Minus

                                                                            
Query: 1        ggaacaatgctgaaggtgaatttgcccgtagtgttcaagggggaggatgtctgccctggg 60
                |||||||||||||||||||| ||||| |||| ||||||||||||||| ||||||||||||
Sbjct: 22940134 ggaacaatgctgaaggtgaacttgcctgtagagttcaagggggaggacgtctgccctggg 22940075

                            
Query: 61       ttaaagaaaggt 72
                || |||||||||
Sbjct: 22940074 ttgaagaaaggt 22940063
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>ref|NM_001057192.1| Oryza sativa (japonica cultivar-group) Os03g0612600 (Os03g0612600)
           mRNA, partial cds
          Length = 906

 Score =  170 bits (86), Expect = 3e-39
 Identities = 146/166 (87%)
 Strand = Plus / Plus

                                                                       
Query: 83  agaaaatcaggaccagtttggtgtatctctgcccggccgagcacatccctccaaaaatcg 142
           ||||||| |||||||| ||||||||||||||||| || |||||||||||||||||||| |
Sbjct: 489 agaaaataaggaccagcttggtgtatctctgccctgctgagcacatccctccaaaaattg 548

                                                                       
Query: 143 aggtggacctcacaaatgttgacattggggatagagtgttaatgcaggacatccccgtcc 202
           ||||||||||  ||||| |||||||||| ||||| || | |||| | |||||||||||||
Sbjct: 549 aggtggacctggcaaatcttgacattggagatagggtatcaatgaatgacatccccgtcc 608

                                                         
Query: 203 atccatcgctcaagttactgagtaaaaacgagacgatgcccgtctg 248
           |||| ||| | | ||||||||||||||||||||| ||||| |||||
Sbjct: 609 atccgtcgttgaggttactgagtaaaaacgagaccatgcctgtctg 654



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 65/70 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggaacaatgctgaaggtgaatttgcccgtagtgttcaagggggaggatgtctgccctggg 60
           |||||||||||||||||||| ||||| |||| ||||||||||||||| ||||||||||||
Sbjct: 421 ggaacaatgctgaaggtgaacttgcctgtagagttcaagggggaggacgtctgccctggg 480

                     
Query: 61  ttaaagaaag 70
           || |||||||
Sbjct: 481 ttgaagaaag 490
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>dbj|AK071403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089B10, full
           insert sequence
          Length = 907

 Score =  163 bits (82), Expect = 8e-37
 Identities = 145/166 (87%)
 Strand = Plus / Plus

                                                                       
Query: 83  agaaaatcaggaccagtttggtgtatctctgcccggccgagcacatccctccaaaaatcg 142
           ||||||| |||||||| ||||||||||||||||| || |||||||||||||||||||| |
Sbjct: 490 agaaaataaggaccagcttggtgtatctctgccctgctgagcacatccctccaaaaattg 549

                                                                       
Query: 143 aggtggacctcacaaatgttgacattggggatagagtgttaatgcaggacatccccgtcc 202
           ||||||||||  ||||| ||| |||||| ||||| || | |||| | |||||||||||||
Sbjct: 550 aggtggacctggcaaatcttggcattggagatagggtatcaatgaatgacatccccgtcc 609

                                                         
Query: 203 atccatcgctcaagttactgagtaaaaacgagacgatgcccgtctg 248
           |||| ||| | | ||||||||||||||||||||| ||||| |||||
Sbjct: 610 atccgtcgttgaggttactgagtaaaaacgagaccatgcctgtctg 655



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 65/70 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggaacaatgctgaaggtgaatttgcccgtagtgttcaagggggaggatgtctgccctggg 60
           |||||||||||||||||||| ||||| |||| ||||||||||||||| ||||||||||||
Sbjct: 422 ggaacaatgctgaaggtgaacttgcctgtagagttcaagggggaggacgtctgccctggg 481

                     
Query: 61  ttaaagaaag 70
           || |||||||
Sbjct: 482 ttgaagaaag 491
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>ref|NM_001076961.1| Bos taurus C4orf32 homolog (C4orf32), mRNA
 gb|BC118416.1| Bos taurus C4orf32 homolog, mRNA (cDNA clone MGC:140679
           IMAGE:8273143), complete cds
          Length = 2511

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 111 ctgcccggccgagcacatccc 131
           |||||||||||||||||||||
Sbjct: 158 ctgcccggccgagcacatccc 138
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>emb|CR855226.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0616E02-H0507E05,
              complete sequence
          Length = 110274

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 422    acaagtttattgtgttcaagatac 445
              ||||||||||| ||||||||||||
Sbjct: 100486 acaagtttattatgttcaagatac 100463
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>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence
          Length = 24543557

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 385      tagttgctatgctccagtttgctc 408
                ||||||| ||||||||||||||||
Sbjct: 13649439 tagttgcaatgctccagtttgctc 13649462
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>emb|CT025694.11| Mouse DNA sequence from clone RP24-66N5 on chromosome 14, complete
              sequence
          Length = 203022

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     gtgttcaagggggaggatgt 50
              ||||||||||||||||||||
Sbjct: 167224 gtgttcaagggggaggatgt 167243
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>gb|AC146098.3| Pan troglodytes BAC clone RP43-51J12 from 7, complete sequence
          Length = 195811

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 343    cctgaaaatttaatccctct 362
              ||||||||||||||||||||
Sbjct: 132043 cctgaaaatttaatccctct 132062
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>gb|AC154644.2| Mus musculus BAC clone RP23-278G20 from chromosome 14, complete sequence
          Length = 175685

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     gtgttcaagggggaggatgt 50
              ||||||||||||||||||||
Sbjct: 151413 gtgttcaagggggaggatgt 151432
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>gb|AC093536.4| Homo sapiens chromosome 16 clone RP11-744D14, complete sequence
          Length = 199655

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 409   atagtagattcaaacaagtt 428
             ||||||||||||||||||||
Sbjct: 88789 atagtagattcaaacaagtt 88808
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>gb|AC096752.4| Homo sapiens BAC clone RP11-454E2 from 7, complete sequence
          Length = 131629

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 343  cctgaaaatttaatccctct 362
            ||||||||||||||||||||
Sbjct: 8111 cctgaaaatttaatccctct 8092
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>gb|AC024382.7| Homo sapiens chromosome 8, clone RP11-351C8, complete sequence
          Length = 193599

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 461   taatgtcatcatgaaataatatat 484
             |||||| |||||||||||||||||
Sbjct: 83306 taatgttatcatgaaataatatat 83283
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>gb|AC163436.3| Mus musculus chromosome 1, clone RP23-102H12, complete sequence
          Length = 198253

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     tcaggaccagtttggtgtat 108
              ||||||||||||||||||||
Sbjct: 113146 tcaggaccagtttggtgtat 113127
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>gb|AC091226.3| Drosophila melanogaster 3L BAC RP98-3I13 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 165518

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 385    tagttgctatgctccagtttgctc 408
              ||||||| ||||||||||||||||
Sbjct: 143430 tagttgcaatgctccagtttgctc 143453
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>gb|AC069405.6| Drosophila melanogaster 3L BAC RP98-17J20 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 167638

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 385   tagttgctatgctccagtttgctc 408
             ||||||| ||||||||||||||||
Sbjct: 11541 tagttgcaatgctccagtttgctc 11564
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>emb|CR925840.6| Zebrafish DNA sequence from clone DKEYP-52F9 in linkage group 3,
             complete sequence
          Length = 47526

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 366   tgctttgccttttggtacct 385
             ||||||||||||||||||||
Sbjct: 45764 tgctttgccttttggtacct 45783
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>gb|AC116663.1| Rattus norvegicus, clone RP31-109I17, complete sequence
          Length = 165658

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   aatccctctatctgctttgc 373
             ||||||||||||||||||||
Sbjct: 17606 aatccctctatctgctttgc 17587
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>gb|AC016816.5| Homo sapiens chromosome 10 clone RP11-113P9, complete sequence
          Length = 174311

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 357   ccctctatctgctttgcctt 376
             ||||||||||||||||||||
Sbjct: 67233 ccctctatctgctttgcctt 67214
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>gb|AC027669.11| Homo sapiens chromosome 10 clone RP11-165N2, complete sequence
          Length = 177135

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 357    ccctctatctgctttgcctt 376
              ||||||||||||||||||||
Sbjct: 154039 ccctctatctgctttgcctt 154020
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 422    acaagtttattgtgttcaagatac 445
              ||||||||||| ||||||||||||
Sbjct: 451669 acaagtttattatgttcaagatac 451646
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>emb|AL078639.5|HSDJ177G6 Human DNA sequence from clone RP1-177G6 on chromosome Xq26.2-27.3
             Contains a novel gene, the CDR1 gene for cerebellar
             degeneration-related protein 1, 34kDa and a CpG island,
             complete sequence
          Length = 129127

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    cctgggttaaagaaaggtgg 74
             ||||||||||||||||||||
Sbjct: 91171 cctgggttaaagaaaggtgg 91190
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>emb|CR392045.5| Zebrafish DNA sequence from clone DKEY-167C9 in linkage group 3, complete
              sequence
          Length = 152453

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 366    tgctttgccttttggtacct 385
              ||||||||||||||||||||
Sbjct: 152216 tgctttgccttttggtacct 152197
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>gb|AC154419.2| Mus musculus BAC clone RP24-212C1 from chromosome 14, complete sequence
          Length = 167114

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     gtgttcaagggggaggatgt 50
              ||||||||||||||||||||
Sbjct: 139034 gtgttcaagggggaggatgt 139015
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>emb|AL662792.21| Mouse DNA sequence from clone RP23-52L14 on chromosome 11, complete
             sequence
          Length = 164120

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 420   aaacaagtttattgtgttcaagat 443
             ||||| ||||||||||||||||||
Sbjct: 51825 aaacaggtttattgtgttcaagat 51848
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>emb|CR628311.1| Human DNA sequence from clone XX-NCIH2171_5AD01, complete sequence
          Length = 114317

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 461   taatgtcatcatgaaataatatat 484
             |||||| |||||||||||||||||
Sbjct: 32835 taatgttatcatgaaataatatat 32858
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>gb|AC102900.12| Mus musculus chromosome 1, clone RP24-315J13, complete sequence
          Length = 192545

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    tcaggaccagtttggtgtat 108
             ||||||||||||||||||||
Sbjct: 78675 tcaggaccagtttggtgtat 78656
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>emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085F13,
             complete sequence
          Length = 130249

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 422   acaagtttattgtgttcaagatac 445
             ||||||||||| ||||||||||||
Sbjct: 90421 acaagtttattatgttcaagatac 90398


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 86,444,708
Number of extensions: 4323932
Number of successful extensions: 77109
Number of sequences better than 10.0: 30
Number of HSP's gapped: 77108
Number of HSP's successfully gapped: 35
Length of query: 512
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 490
Effective length of database: 18,508,616,841
Effective search space: 9069222252090
Effective search space used: 9069222252090
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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