ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf96d24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK102829:Os05g0103500 198 4e-51
2AK060306:Os05g0103500 198 4e-51
3AK121027:Os07g0655500 30 2.6
4Os02g0826700:Os02g0826700 29 4.5
5Os01g0751800:Os01g0751800 28 7.7
6AK073326:Os06g0710900 28 7.7

>AK102829:Os05g0103500 |
          Length = 180
 Score =  198 bits (504), Expect = 4e-51
 Identities = 99/168 (58%), Positives = 114/168 (67%)
 Frame = +1

Query: 169 MGDYTIRISTSLIEQLARDDEXXXXXXXXXXXXXXXXEQQEEPQDNGRELPTEPKSSPAP 348
           MGDYTI+IST LI+QLARDDE                + Q+EPQDN RELP     +P P
Sbjct: 1   MGDYTIQISTKLIDQLARDDEKIKKKTRKPKPKKTVKQHQQEPQDNSRELPASEPKAP-P 59

Query: 349 GWSLPPPMYXXXXXXXXXXXXXIQEVEAIRTVVAESEKVLEKLQKKEATMRDELTKRAKE 528
           GW L PPMY               E+EAIR V+ ESEKV EKL K+ A MRDEL K++K+
Sbjct: 60  GWPLQPPMYLPVTPAPPPPPPAFSELEAIRAVLEESEKVQEKLDKQHAGMRDELIKKSKD 119

Query: 529 LHDKEFKLPYQNPSPCTDERAGCAECYRSNVQDPLKCAEAVKRFEACV 672
           L DKEFKLPYQNP+PCT+ER+ C +CY SN QDPLKCAEAVKRFEACV
Sbjct: 120 LRDKEFKLPYQNPTPCTEERSNCRQCYVSNAQDPLKCAEAVKRFEACV 167



to top

>AK060306:Os05g0103500 |
          Length = 180

 Score =  198 bits (504), Expect = 4e-51
 Identities = 99/168 (58%), Positives = 114/168 (67%)
 Frame = +1

Query: 169 MGDYTIRISTSLIEQLARDDEXXXXXXXXXXXXXXXXEQQEEPQDNGRELPTEPKSSPAP 348
           MGDYTI+IST LI+QLARDDE                + Q+EPQDN RELP     +P P
Sbjct: 1   MGDYTIQISTKLIDQLARDDEKIKKKTRKPKPKKTVKQHQQEPQDNSRELPASEPKAP-P 59

Query: 349 GWSLPPPMYXXXXXXXXXXXXXIQEVEAIRTVVAESEKVLEKLQKKEATMRDELTKRAKE 528
           GW L PPMY               E+EAIR V+ ESEKV EKL K+ A MRDEL K++K+
Sbjct: 60  GWPLQPPMYLPVTPAPPPPPPAFSELEAIRAVLEESEKVQEKLDKQHAGMRDELIKKSKD 119

Query: 529 LHDKEFKLPYQNPSPCTDERAGCAECYRSNVQDPLKCAEAVKRFEACV 672
           L DKEFKLPYQNP+PCT+ER+ C +CY SN QDPLKCAEAVKRFEACV
Sbjct: 120 LRDKEFKLPYQNPTPCTEERSNCRQCYVSNAQDPLKCAEAVKRFEACV 167



to top

>AK121027:Os07g0655500 |
          Length = 1447

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 319  PTEPKSSPAPGWSLPP 366
            P+ P + P PGWS+PP
Sbjct: 1396 PSNPPTGPGPGWSMPP 1411



to top

>Os02g0826700:Os02g0826700 |
          Length = 450

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
 Frame = +2

Query: 860 CYG----IAPVWARPECP*IWGFPVTYILHSAAISNVNCGC 970
           C+G       +W RPECP + G PV + L   ++ +V  GC
Sbjct: 261 CHGDPLSFGDIWVRPECPKLLG-PVFHKLQRVSLVDVPEGC 300



to top

>Os01g0751800:Os01g0751800 |
          Length = 615

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -3

Query: 840 GVSGLIENPCRLFNQSSRQRQNRVY 766
           G S ++EN  R +N+ +R RQ RVY
Sbjct: 271 GCSDIVENSSRSYNRGNRLRQIRVY 295



to top

>AK073326:Os06g0710900 |
          Length = 291

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 283 QQEEPQDNGRELPTEPKSSPAPGWSLPPP 369
           Q+  P+D  +E   +  SSP P  + PPP
Sbjct: 105 QERRPEDAAKEAQEKENSSPPPSQAHPPP 133


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 22,951,711
Number of extensions: 451496
Number of successful extensions: 1767
Number of sequences better than 10.0: 6
Number of HSP's gapped: 1761
Number of HSP's successfully gapped: 6
Length of query: 331
Length of database: 15,399,855
Length adjustment: 101
Effective length of query: 230
Effective length of database: 11,355,714
Effective search space: 2611814220
Effective search space used: 2611814220
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top