Clone Name | FLbaf96d24 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AK102829:Os05g0103500 | 198 | 4e-51 | 2 | AK060306:Os05g0103500 | 198 | 4e-51 | 3 | AK121027:Os07g0655500 | 30 | 2.6 | 4 | Os02g0826700:Os02g0826700 | 29 | 4.5 | 5 | Os01g0751800:Os01g0751800 | 28 | 7.7 | 6 | AK073326:Os06g0710900 | 28 | 7.7 |
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>AK102829:Os05g0103500 | Length = 180 Score = 198 bits (504), Expect = 4e-51 Identities = 99/168 (58%), Positives = 114/168 (67%) Frame = +1 Query: 169 MGDYTIRISTSLIEQLARDDEXXXXXXXXXXXXXXXXEQQEEPQDNGRELPTEPKSSPAP 348 MGDYTI+IST LI+QLARDDE + Q+EPQDN RELP +P P Sbjct: 1 MGDYTIQISTKLIDQLARDDEKIKKKTRKPKPKKTVKQHQQEPQDNSRELPASEPKAP-P 59 Query: 349 GWSLPPPMYXXXXXXXXXXXXXIQEVEAIRTVVAESEKVLEKLQKKEATMRDELTKRAKE 528 GW L PPMY E+EAIR V+ ESEKV EKL K+ A MRDEL K++K+ Sbjct: 60 GWPLQPPMYLPVTPAPPPPPPAFSELEAIRAVLEESEKVQEKLDKQHAGMRDELIKKSKD 119 Query: 529 LHDKEFKLPYQNPSPCTDERAGCAECYRSNVQDPLKCAEAVKRFEACV 672 L DKEFKLPYQNP+PCT+ER+ C +CY SN QDPLKCAEAVKRFEACV Sbjct: 120 LRDKEFKLPYQNPTPCTEERSNCRQCYVSNAQDPLKCAEAVKRFEACV 167
>AK060306:Os05g0103500 | Length = 180 Score = 198 bits (504), Expect = 4e-51 Identities = 99/168 (58%), Positives = 114/168 (67%) Frame = +1 Query: 169 MGDYTIRISTSLIEQLARDDEXXXXXXXXXXXXXXXXEQQEEPQDNGRELPTEPKSSPAP 348 MGDYTI+IST LI+QLARDDE + Q+EPQDN RELP +P P Sbjct: 1 MGDYTIQISTKLIDQLARDDEKIKKKTRKPKPKKTVKQHQQEPQDNSRELPASEPKAP-P 59 Query: 349 GWSLPPPMYXXXXXXXXXXXXXIQEVEAIRTVVAESEKVLEKLQKKEATMRDELTKRAKE 528 GW L PPMY E+EAIR V+ ESEKV EKL K+ A MRDEL K++K+ Sbjct: 60 GWPLQPPMYLPVTPAPPPPPPAFSELEAIRAVLEESEKVQEKLDKQHAGMRDELIKKSKD 119 Query: 529 LHDKEFKLPYQNPSPCTDERAGCAECYRSNVQDPLKCAEAVKRFEACV 672 L DKEFKLPYQNP+PCT+ER+ C +CY SN QDPLKCAEAVKRFEACV Sbjct: 120 LRDKEFKLPYQNPTPCTEERSNCRQCYVSNAQDPLKCAEAVKRFEACV 167
>AK121027:Os07g0655500 | Length = 1447 Score = 30.0 bits (66), Expect = 2.6 Identities = 9/16 (56%), Positives = 12/16 (75%) Frame = +1 Query: 319 PTEPKSSPAPGWSLPP 366 P+ P + P PGWS+PP Sbjct: 1396 PSNPPTGPGPGWSMPP 1411
>Os02g0826700:Os02g0826700 | Length = 450 Score = 29.3 bits (64), Expect = 4.5 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%) Frame = +2 Query: 860 CYG----IAPVWARPECP*IWGFPVTYILHSAAISNVNCGC 970 C+G +W RPECP + G PV + L ++ +V GC Sbjct: 261 CHGDPLSFGDIWVRPECPKLLG-PVFHKLQRVSLVDVPEGC 300
>Os01g0751800:Os01g0751800 | Length = 615 Score = 28.5 bits (62), Expect = 7.7 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = -3 Query: 840 GVSGLIENPCRLFNQSSRQRQNRVY 766 G S ++EN R +N+ +R RQ RVY Sbjct: 271 GCSDIVENSSRSYNRGNRLRQIRVY 295
>AK073326:Os06g0710900 | Length = 291 Score = 28.5 bits (62), Expect = 7.7 Identities = 11/29 (37%), Positives = 16/29 (55%) Frame = +1 Query: 283 QQEEPQDNGRELPTEPKSSPAPGWSLPPP 369 Q+ P+D +E + SSP P + PPP Sbjct: 105 QERRPEDAAKEAQEKENSSPPPSQAHPPP 133 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 22,951,711 Number of extensions: 451496 Number of successful extensions: 1767 Number of sequences better than 10.0: 6 Number of HSP's gapped: 1761 Number of HSP's successfully gapped: 6 Length of query: 331 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 230 Effective length of database: 11,355,714 Effective search space: 2611814220 Effective search space used: 2611814220 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)