ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf96d24 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os05g01300:12005.t04697:unspliced-genomic CHCH domain containing protein, expressed| Length = 1646 Score = 174 bits (375), Expect(3) = 9e-56 Identities = 70/109 (64%), Positives = 80/109 (73%) Frame = +1 / +1 Query: 346 PGWSLPPPMYXXXXXXXXXXXXXIQEVEAIRTVVAESEKVLEKLQKKEATMRDELTKRAK 525 PGW L PPMY E+EAIR V+ ESEKV EKL K+ A MRDEL K++K Sbjct: 1012 PGWPLQPPMYLPVTPAPPPPPPAFSELEAIRAVLEESEKVQEKLDKQHAGMRDELIKKSK 1191 Query: 526 ELHDKEFKLPYQNPSPCTDERAGCAECYRSNVQDPLKCAEAVKRFEACV 672 +L DKEFKLPYQNP+PCT+ER+ C +CY SN QDPLKCAEAVKRFEACV Sbjct: 1192 DLRDKEFKLPYQNPTPCTEERSNCRQCYVSNAQDPLKCAEAVKRFEACV 1338 Score = 48.7 bits (100), Expect(3) = 9e-56 Identities = 20/24 (83%), Positives = 22/24 (91%) Frame = +1 / +1 Query: 160 LSAMGDYTIRISTSLIEQLARDDE 231 LS MGDYTI+IST LI+QLARDDE Sbjct: 829 LSVMGDYTIQISTKLIDQLARDDE 900 Score = 33.1 bits (66), Expect(3) = 9e-56 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +1 / +1 Query: 280 EQQEEPQDNGRELPTEPKSSPAPGWSLPP 366 + Q+EPQDN RELP +P PP Sbjct: 949 QHQQEPQDNSRELPASEPKAPPGWPLQPP 1035 Score = 40.9 bits (83), Expect(4) = 2e-15 Identities = 16/17 (94%), Positives = 16/17 (94%) Frame = -1 / -1 Query: 671 THASNLFTASAHLSGSC 621 THASNL TASAHLSGSC Sbjct: 1337 THASNLLTASAHLSGSC 1287 Score = 35.4 bits (71), Expect(4) = 2e-15 Identities = 17/25 (68%), Positives = 21/25 (84%) Frame = -1 / -1 Query: 233 FSSSRASCSIKLVLIRIV*SPMADN 159 FSSSRAS SI LVLI +V*SP+ ++ Sbjct: 902 FSSSRASWSISLVLIWMV*SPITES 828 Score = 33.1 bits (66), Expect(4) = 2e-15 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -2 / -2 Query: 433 WLPPPG*PAGAVEQQGSLVGTWGVAVTTQEQ 341 WLP G VE+QG TW AV +QE+ Sbjct: 1099 WLPALKKQVGVVEEQGLRGDTWEAAVASQEE 1007 Score = 26.7 bits (52), Expect(4) = 2e-15 Identities = 8/9 (88%), Positives = 8/9 (88%) Frame = -1 / -1 Query: 578 VHGEGFWYG 552 VHG GFWYG Sbjct: 1244 VHGVGFWYG 1218 Score = 45.1 bits (92), Expect(3) = 4e-15 Identities = 18/31 (58%), Positives = 19/31 (61%) Frame = +2 / +2 Query: 341 LLLGGHCHPPCTYQ*PLLLHCPRRSSRRWKP 433 LLL GHC PC *PLLLH P + WKP Sbjct: 1007 LLLAGHCSLPCISP*PLLLHHPHLLFQSWKP 1099 Score = 38.6 bits (78), Expect(3) = 4e-15 Identities = 26/61 (42%), Positives = 30/61 (49%) Frame = +2 / +2 Query: 170 WVTTQSG*APA*SNSSRAMTRSR*KGGPGNPSRRRSWSNKRSLRTMGGNFQLNPRAALLL 349 WVTT S AP+*S S MTR + RR S + +S RT GN QL LL Sbjct: 839 WVTTPSRLAPS*STSLLVMTRRSKRKPGNPSLRRLSNNINKSPRTTQGNSQLLNPRLLLA 1018 Query: 350 G 352 G Sbjct: 1019 G 1021 Score = 35.0 bits (70), Expect(3) = 4e-15 Identities = 14/27 (51%), Positives = 19/27 (70%) Frame = +3 / +3 Query: 555 VPEPLAVHRREGRVRRVLQEQCAGPAQ 635 VP+P A+H E ++ VL+EQC GP Q Sbjct: 1221 VPKPHAMH*GEVKLPPVLREQCTGPTQ 1301 Score = 33.6 bits (67), Expect(2) = 7e-04 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +3 / +3 Query: 336 QPCSWVVTATPHVPTSDPCCSTAP 407 Q SW+ TA HV +PC ST P Sbjct: 1002 QGSSWLATAASHVSPRNPCSSTTP 1073 Score = 29.5 bits (58), Expect(2) = 7e-04 Identities = 10/15 (66%), Positives = 13/15 (86%) Frame = +3 / +3 Query: 165 CHG*LHNPDKHQLDR 209 C+G*LH+PD HQ +R Sbjct: 834 CYG*LHHPD*HQANR 878 Score = 31.8 bits (63), Expect(3) = 0.006 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = -3 / -3 Query: 432 GFHLLDDRRGQWSSRGHW*VHGGWQ*PPR 346 GF L R G W SRG+ +HG Q P R Sbjct: 1098 GFQL*KSRWGWWRSRGYGEIHGRLQWPAR 1012 Score = 27.2 bits (53), Expect(3) = 0.006 Identities = 9/12 (75%), Positives = 9/12 (75%) Frame = -2 / -2 Query: 199 WCLSGLCSHPWQ 164 WC SG CSHP Q Sbjct: 868 WC*SGWCSHP*Q 833 Score = 23.5 bits (45), Expect(3) = 0.006 Identities = 9/10 (90%), Positives = 9/10 (90%) Frame = -2 / -2 Query: 565 GSGTAA*TPC 536 G GTAA*TPC Sbjct: 1231 GFGTAA*TPC 1202
>LOC_Os08g07010:12008.t00590:unspliced-genomic ABC-2 type transporter family protein, expressed| Length = 5116 Score = 31.8 bits (63), Expect(2) = 0.019 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +3 / +3 Query: 339 PCSWVVTATPHVPTSDPCCSTAPA 410 PCSW + P P S P S++PA Sbjct: 4365 PCSWTSSRAPPSPPSSPWSSSSPA 4436 Score = 26.3 bits (51), Expect(2) = 0.019 Identities = 13/42 (30%), Positives = 20/42 (47%) Frame = +2 / +3 Query: 170 WVTTQSG*APA*SNSSRAMTRSR*KGGPGNPSRRRSWSNKRS 295 W + AP+ S SS + T S G+P SW++ R+ Sbjct: 4266 WAASTRALAPSSSPSSSSSTASSSPRASGSPLAPCSWTSSRA 4391
>LOC_Os01g17320:12001.t01578:unspliced-genomic DNA-binding protein, putative, expressed| Length = 4338 Score = 32.7 bits (65), Expect(2) = 0.11 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +1 / +2 Query: 142 PPPPGLLSAMGDYTIRISTSLIEQLARDD 228 PPPPG+L+A ++ + S+ E L R D Sbjct: 68 PPPPGVLAASAPLSLSLPLSIAESLHRHD 154 Score = 22.6 bits (43), Expect(2) = 0.11 Identities = 8/10 (80%), Positives = 8/10 (80%) Frame = +1 / +1 Query: 340 PAPGWSLPPP 369 PAP SLPPP Sbjct: 223 PAPPLSLPPP 252
>LOC_Os01g73980:12001.t06678:unspliced-genomic xylem cysteine proteinase 2 precursor, putative, expressed| Length = 1810 Score = 24.9 bits (48), Expect(3) = 0.16 Identities = 9/17 (52%), Positives = 10/17 (58%) Frame = +1 / -2 Query: 319 PTEPKSSPAPGWSLPPP 369 P SSP P +LPPP Sbjct: 501 PPPSSSSPPPSANLPPP 451 Score = 23.1 bits (44), Expect(3) = 0.16 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = +3 / -2 Query: 366 PHVPTSDPCCSTAP 407 P T+D CCS++P Sbjct: 447 PRT*TTDRCCSSSP 406 Score = 22.6 bits (43), Expect(3) = 0.16 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +2 / -2 Query: 182 QSG*APA*SNSSRAMTRSR*KGGPGNPSRRRS 277 +S *APA + +S +R R* P PSR S Sbjct: 633 RSR*APAPTGASGCRSRWR*SPPPPPPSRTPS 538
>LOC_Os02g45880:12002.t04175:unspliced-genomic expressed protein| Length = 708 Score = 37.3 bits (75), Expect = 0.18 Identities = 15/28 (53%), Positives = 17/28 (60%) Frame = +2 / -3 Query: 218 RAMTRSR*KGGPGNPSRRRSWSNKRSLR 301 R R R +GGP P RRRSW +RS R Sbjct: 382 RRRRRRRRRGGPARPPRRRSWRARRSRR 299
>LOC_Os07g37820:12007.t03450:unspliced-genomic expressed protein| Length = 4660 Score = 26.7 bits (52), Expect(2) = 0.50 Identities = 11/33 (33%), Positives = 16/33 (48%) Frame = +2 / -1 Query: 182 QSG*APA*SNSSRAMTRSR*KGGPGNPSRRRSW 280 + G PA + + A R +GGPG+ R W Sbjct: 271 ERGSLPAAAGAGAAAPSQRGRGGPGSGGSARGW 173 Score = 26.3 bits (51), Expect(2) = 0.50 Identities = 11/17 (64%), Positives = 11/17 (64%) Frame = +1 / -1 Query: 316 LPTEPKSSPAPGWSLPP 366 LPT P SPAP S PP Sbjct: 58 LPTPPPPSPAPTPSPPP 8
>LOC_Os03g12670:12003.t01065:unspliced-genomic expressed protein| Length = 2722 Score = 32.2 bits (64), Expect(2) = 0.73 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = -2 / -2 Query: 913 PPNLRTLGPRPDWCNPITELIYN 845 P R P P WC+ +TE IYN Sbjct: 2187 PQQRRNCYPEPPWCSTLTEEIYN 2119 Score = 24.9 bits (48), Expect(2) = 0.73 Identities = 15/47 (31%), Positives = 18/47 (38%) Frame = -2 / -2 Query: 814 LQVIQSIIPTEAKSCLRHLAHSAPTHNPSSSATTEQLPWHHRSASPC 674 +Q S++P A S APT T Q HRSA C Sbjct: 522 IQATTSLLPRPAASSTPARTEHAPTGPLRGQIYTRQHKEIHRSARGC 382
>LOC_Os10g21910:12010.t01673:unspliced-genomic acetyl-coenzyme A carboxylase ACC1A, putative, expressed| Length = 11108 Score = 35.0 bits (70), Expect = 0.88 Identities = 13/22 (59%), Positives = 14/22 (63%) Frame = +1 / -2 Query: 310 RELPTEPKSSPAPGWSLPPPMY 375 RELP PK SP+P P PMY Sbjct: 241 RELPWRPKESPSPSQRSPAPMY 176
>LOC_Os10g35550:12010.t02851:unspliced-genomic pre-mRNA-splicing factor prp1, putative, expressed| Length = 4595 Score = 34.5 bits (69), Expect = 1.2 Identities = 16/54 (29%), Positives = 24/54 (44%) Frame = +1 / -3 Query: 508 LTKRAKELHDKEFKLPYQNPSPCTDERAGCAECYRSNVQDPLKCAEAVKRFEAC 669 + R +LH +P P+P RAGC RS+ CA + +F+ C Sbjct: 1023 MASRCHQLHGSWDPVP*HAPAPAEPSRAGCPARERSSQIASSCCAASSPQFQVC 862
>LOC_Os10g09930:12010.t00805:unspliced-genomic expressed protein| Length = 1114 Score = 29.0 bits (57), Expect(2) = 1.3 Identities = 11/21 (52%), Positives = 12/21 (57%) Frame = -3 / +2 Query: 702 HGTTAPPRHADARLEPLHRLG 640 HG PPRHA R +P R G Sbjct: 692 HGRADPPRHARLRHQPRRRQG 754 Score = 22.6 bits (43), Expect(2) = 1.3 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = -2 / +1 Query: 751 SAPTHNPSSSATTEQLPW 698 S P PSS+A++ PW Sbjct: 637 SPPPSAPSSAASSSWCPW 690
>LOC_Os07g01840:12007.t00081:unspliced-genomic expressed protein| Length = 2501 Score = 34.1 bits (68), Expect = 1.7 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = +2 / -2 Query: 212 SSRAMTRSR*KGGPGNPSRRRSWSNKRSLRTMGG 313 S R+ R R G G SRRR W+ +R R GG Sbjct: 337 SRRSWCRGRPGGAGGTASRRRRWAGRRRHRQRGG 236
>LOC_Os01g72520:12001.t06540:unspliced-genomic hydrolase, acting on ester bonds, putative, expressed| Length = 4608 Score = 28.6 bits (56), Expect(2) = 2.1 Identities = 9/20 (45%), Positives = 11/20 (55%) Frame = +3 / -1 Query: 258 TQAEEGRGATRGASGQWEGT 317 ++ GRG RG G W GT Sbjct: 3255 SRGRRGRGTRRGTGGTWSGT 3196 Score = 27.6 bits (54), Expect(2) = 2.1 Identities = 7/23 (30%), Positives = 13/23 (56%) Frame = +1 / -2 Query: 571 PCTDERAGCAECYRSNVQDPLKC 639 P ++A C C + + DP++C Sbjct: 2747 PIMGQQARCVSCLLTRISDPIRC 2679
>LOC_Os08g04200:12008.t00315:unspliced-genomic hypothetical protein| Length = 231 Score = 33.6 bits (67), Expect = 2.3 Identities = 16/37 (43%), Positives = 16/37 (43%) Frame = -2 / -3 Query: 787 TEAKSCLRHLAHSAPTHNPSSSATTEQLPWHHRSASP 677 T A CLRH H AP H S QLP A P Sbjct: 229 TAAHCCLRHRCHRAPEHRSPSLPEVLQLPKPAAPAPP 119
>LOC_Os01g13370:12001.t01199:unspliced-genomic ubiquitin ligase SINAT3, putative, expressed| Length = 2846 Score = 33.6 bits (67), Expect = 2.3 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -3 / -3 Query: 699 GTTAPPRHADARLEPLHRLGALERVLHIAPVALGAPGPLVGA 574 G P D R+ + GALE+++H AP +P P +GA Sbjct: 750 GIKREPHLVDRRVHGVGADGALEQLVHAAPGRRASPSPSLGA 625
>LOC_Os01g11880:12001.t01058:unspliced-genomic 4-methyl-5-thiazole monophosphate biosynthesis protein, putative,| expressed Length = 3728 Score = 33.6 bits (67), Expect = 2.3 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = +2 / +3 Query: 362 HPPCTYQ*PLLLHCPRR 412 H PCT Q PLL HCP R Sbjct: 96 HCPCTLQLPLLYHCPLR 146
>LOC_Os07g46180:12007.t04254:unspliced-genomic PWWP domain containing protein, expressed| Length = 11146 Score = 33.1 bits (66), Expect = 3.1 Identities = 9/16 (56%), Positives = 12/16 (75%) Frame = +1 / +3 Query: 319 PTEPKSSPAPGWSLPP 366 P+ P + P PGWS+PP Sbjct: 9870 PSNPPTGPGPGWSMPP 9917
>LOC_Os06g34590:12006.t03156:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 1784 Score = 33.1 bits (66), Expect = 3.1 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = -3 / +1 Query: 693 TAPPRHADARLEPLHRLGALERVLHIAPVALGAPGP 586 ++PP H+D+ LE H LG L +AP +G P Sbjct: 340 SSPPHHSDSGLEIQHALGLLPNSGGLAPPVIGYYAP 447
>LOC_Os01g12500:12001.t01117:unspliced-genomic hypothetical protein| Length = 427 Score = 33.1 bits (66), Expect = 3.1 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +1 / -3 Query: 295 PQDNGRELPTEPKSSPAPGWSLPPP 369 P +GRE+ EP SP G LPPP Sbjct: 131 PARSGREMGGEPPPSPPTGLPLPPP 57
>LOC_Os01g61540:12001.t05533:unspliced-genomic hypothetical protein| Length = 831 Score = 29.0 bits (57), Expect(2) = 3.6 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +1 / +2 Query: 298 QDNGRELPTEPKSSPAPGWSLPPP 369 QD G L + +SSPAP S PPP Sbjct: 623 QDRGWALGDDGESSPAPTPSPPPP 694 Score = 24.0 bits (46), Expect(2) = 3.6 Identities = 9/18 (50%), Positives = 10/18 (55%) Frame = +2 / +2 Query: 260 PSRRRSWSNKRSLRTMGG 313 PSRRR W +R R G Sbjct: 86 PSRRRWWGRRRQRRRGAG 139
>LOC_Os03g10100:12003.t00813:unspliced-genomic sorbitol transporter, putative, expressed| Length = 2352 Score = 32.2 bits (64), Expect(2) = 3.8 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = +2 / +2 Query: 194 APA*SNSSRAMTRSR*KGGPGNPSRRRSWSNKRSLRTMGGNFQLNPRA 337 +PA S S+R+ RSR G P + W ++RS + + +PRA Sbjct: 386 SPASSTSTRSSARSRRAGRPTGSAVATPWCSRRSYSSPARSSWASPRA 529 Score = 22.1 bits (42), Expect(2) = 3.8 Identities = 10/26 (38%), Positives = 14/26 (53%) Frame = +3 / +1 Query: 558 PEPLAVHRREGRVRRVLQEQCAGPAQ 635 P L + R G RRVL++ PA+ Sbjct: 808 PRWLVMQGRIGDARRVLEKTSDSPAE 885
>LOC_Os04g54400:12004.t04912:unspliced-genomic transposon protein, putative, Mutator sub-class, expressed| Length = 4278 Score = 26.3 bits (51), Expect(2) = 4.0 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +2 / +3 Query: 194 APA*SNSSRAMTRSR*KGGPGNPSRRRSW 280 AP S + +R +G PG SRRR W Sbjct: 2166 APPRS*TPARRAATRWRGWPGTSSRRRRW 2252 Score = 23.5 bits (45), Expect(2) = 4.0 Identities = 8/21 (38%), Positives = 10/21 (47%) Frame = +1 / +3 Query: 310 RELPTEPKSSPAPGWSLPPPM 372 R P +S P WS PP+ Sbjct: 2352 RRSPPRRRSRTKPSWSTAPPV 2414
>LOC_Os12g03816:12012.t00273:unspliced-genomic calmodulin-related protein, putative, expressed| Length = 1710 Score = 32.7 bits (65), Expect = 4.3 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = +3 / +2 Query: 345 SWVVTATPHVPTSDPCCSTAP 407 SW +ATP TS P CST P Sbjct: 656 SWPTSATPSPTTSSPTCSTRP 718
>LOC_Os11g03980:12011.t00288:unspliced-genomic calmodulin-6, putative| Length = 733 Score = 32.7 bits (65), Expect = 4.3 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = +3 / +2 Query: 345 SWVVTATPHVPTSDPCCSTAP 407 SW +ATP TS P CST P Sbjct: 341 SWPTSATPSPTTSSPTCSTRP 403
>LOC_Os10g35990:12010.t02886:unspliced-genomic ATP-dependent RNA helicase dhh1, putative, expressed| Length = 5568 Score = 32.7 bits (65), Expect = 4.3 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = +1 / -1 Query: 289 EEPQDNGRELPTEPKSSPAPGWSLPPP 369 + P + R LP P SSP P + PPP Sbjct: 531 KNPHTSSRRLPAAPPSSPRPPRTQPPP 451
>LOC_Os01g49340:12001.t04373:unspliced-genomic arginine/serine-rich coiled coil protein 1, putative, expressed| Length = 2557 Score = 32.7 bits (65), Expect = 4.3 Identities = 16/38 (42%), Positives = 18/38 (47%) Frame = -3 / -2 Query: 699 GTTAPPRHADARLEPLHRLGALERVLHIAPVALGAPGP 586 G APP A R P R GA R + P+ L PGP Sbjct: 510 GVRAPPASARRRPRPRTRPGAAARRPAVLPLPLPGPGP 397
>LOC_Os06g04420:12006.t00331:unspliced-genomic lipoxygenase 4, putative, expressed| Length = 690 Score = 27.6 bits (54), Expect(2) = 4.6 Identities = 10/23 (43%), Positives = 13/23 (56%) Frame = +2 / -3 Query: 242 KGGPGNPSRRRSWSNKRSLRTMG 310 + G G P RR +W+ RS R G Sbjct: 490 RAGRGTPRRRSAWTVSRSARCRG 422 Score = 22.1 bits (42), Expect(2) = 4.6 Identities = 6/8 (75%), Positives = 6/8 (75%) Frame = +2 / -3 Query: 350 GGHCHPPC 373 GGH PPC Sbjct: 334 GGHLRPPC 311
>LOC_Os02g10290:12002.t00877:unspliced-genomic copper-transporting ATPase 3, putative, expressed| Length = 6062 Score = 28.6 bits (56), Expect(2) = 4.8 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = +1 / +2 Query: 571 PCTDERAGCAECYRSNVQDPLK 636 P ++ GC C+RS +DPLK Sbjct: 5399 PDEEQPRGCDHCHRSLQEDPLK 5464 Score = 26.7 bits (52), Expect(2) = 4.8 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = +1 / +2 Query: 304 NGRELPTEPKSSPAPGWSLPPP 369 N ++PT P P P LPPP Sbjct: 5 NINQIPT*PPPRPRPASRLPPP 70
>LOC_Os03g47980:12003.t04159:unspliced-genomic expressed protein| Length = 5891 Score = 25.8 bits (50), Expect(2) = 5.2 Identities = 9/21 (42%), Positives = 11/21 (52%) Frame = +1 / +3 Query: 307 GRELPTEPKSSPAPGWSLPPP 369 GR P+ +PA W L PP Sbjct: 276 GRRTRASPRPAPALRWPLAPP 338 Score = 23.5 bits (45), Expect(2) = 5.2 Identities = 11/35 (31%), Positives = 15/35 (42%) Frame = +1 / +3 Query: 469 EKLQKKEATMRDELTKRAKELHDKEFKLPYQNPSP 573 EK + A R TKR ++ H + P P P Sbjct: 342 EKARSGNAARRGTTTKRQRQRHGSSPRPPPPPPPP 446
>LOC_Os11g28990:12011.t02509:unspliced-genomic TBC domain containing protein, expressed| Length = 5382 Score = 26.7 bits (52), Expect(2) = 5.3 Identities = 10/27 (37%), Positives = 13/27 (48%) Frame = +1 / +1 Query: 295 PQDNGRELPTEPKSSPAPGWSLPPPMY 375 P G +L P P P ++PPP Y Sbjct: 262 PDPYGADLSPPPPPPPKPPPTVPPPSY 342 Score = 22.6 bits (43), Expect(2) = 5.3 Identities = 7/8 (87%), Positives = 8/8 (100%) Frame = +2 / +2 Query: 404 PRRSSRRW 427 PRR+SRRW Sbjct: 332 PRRTSRRW 355
>LOC_Os01g51360:12001.t04569:unspliced-genomic triacylglycerol lipase, putative, expressed| Length = 3121 Score = 24.9 bits (48), Expect(2) = 5.5 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = +2 / -3 Query: 227 TRSR*KGGPGNPSRRR 274 TR R*+ GP P RRR Sbjct: 629 TRRR*RAGPRRPLRRR 582 Score = 24.4 bits (47), Expect(2) = 5.5 Identities = 8/21 (38%), Positives = 10/21 (47%) Frame = +3 / -3 Query: 345 SWVVTATPHVPTSDPCCSTAP 407 SW +TP +S PC P Sbjct: 557 SWTPCSTPRATSSTPCSPGTP 495
>LOC_Os11g43640:12011.t03894:unspliced-genomic extensin-like protein, putative| Length = 2882 Score = 25.8 bits (50), Expect(2) = 5.5 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = +3 / +3 Query: 252 QETQAEEGRGATRGAS 299 QE++A+EG AT GAS Sbjct: 1560 QESRAQEGTSATSGAS 1607 Score = 23.5 bits (45), Expect(2) = 5.5 Identities = 9/17 (52%), Positives = 10/17 (58%) Frame = +1 / +1 Query: 319 PTEPKSSPAPGWSLPPP 369 P+ PKS P G S P P Sbjct: 1720 PSPPKSGPPAGESPPTP 1770
>LOC_Os01g46800:12001.t04130:unspliced-genomic OsWRKY15 - Superfamily of rice TFs having WRKY and zinc finger| domains, expressed Length = 1040 Score = 25.8 bits (50), Expect(3) = 5.8 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = +1 / +1 Query: 328 PKSSPAPGWSLPP 366 P+S+ P WSLPP Sbjct: 910 PESATCPTWSLPP 948 Score = 22.1 bits (42), Expect(3) = 5.8 Identities = 7/9 (77%), Positives = 7/9 (77%) Frame = +1 / +2 Query: 130 AKNRPPPPG 156 A RPPPPG Sbjct: 89 AARRPPPPG 115 Score = 22.1 bits (42), Expect(3) = 5.8 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = +2 / +1 Query: 215 SRAMTRSR*KGGPGNPSRRRSWSNKRSLRT 304 SR +RSR P + RRR S R RT Sbjct: 784 SRTPSRSRSPPWPSSTHRRRRPSCPRRCRT 873
>LOC_Os02g43940:12002.t03979:unspliced-genomic transcriptional factor TINY, putative, expressed| Length = 1418 Score = 27.2 bits (53), Expect(2) = 5.8 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = +2 / +1 Query: 206 SNSSRAMTRSR*KGGPGNPSRRRSWSNKRS 295 S R+ +R+R + PSRRR W R+ Sbjct: 403 SGCRRSASRARSRASGSAPSRRRRWPRART 492 Score = 22.1 bits (42), Expect(2) = 5.8 Identities = 8/21 (38%), Positives = 11/21 (52%) Frame = +1 / +1 Query: 310 RELPTEPKSSPAPGWSLPPPM 372 R P P+ P P + PPP+ Sbjct: 595 RPPPPSPQLQPPPTNASPPPL 657
>LOC_Os11g23790:12011.t01999:unspliced-genomic expressed protein| Length = 6282 Score = 32.2 bits (64), Expect = 5.9 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +1 / +1 Query: 883 GEARVSLDLGVPCYLHTTFCCNIKRELR 966 G A+ + DL V C ++TTF +K ELR Sbjct: 5926 GHAKANGDLWVECNIYTTFSAEVK*ELR 6009
>LOC_Os11g07270:12011.t00618:unspliced-genomic receptor-like protein kinase 5 precursor, putative, expressed| Length = 3847 Score = 32.2 bits (64), Expect = 5.9 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = -2 / -3 Query: 793 IPTEAKSCLRHLAHSAPTHNPSSSATTEQLPWHHRSASP 677 + E K CL +LAH P PSS + W S +P Sbjct: 1799 VEVEQKGCLMNLAHGLPEDCPSSRKCSAHCSWLSLS*TP 1683
>LOC_Os10g33960:12010.t02698:unspliced-genomic HB1, putative, expressed| Length = 6964 Score = 32.2 bits (64), Expect = 5.9 Identities = 11/28 (39%), Positives = 19/28 (67%) Frame = -1 / +3 Query: 908 KSKDTRASPRLVQSHNRINLQLMVFQVS 825 K ++ R +L QSHNR+++ L +F +S Sbjct: 609 KGEERRGRGKLAQSHNRLSISLFLFSLS 692
>LOC_Os06g43350:12006.t04025:unspliced-genomic cytochrome P450 71D10, putative, expressed| Length = 4492 Score = 32.2 bits (64), Expect = 5.9 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = +2 / -2 Query: 212 SSRAMTRSR*KGGPGNPSRRRSWSNKRS 295 S RA +R GG G PSRR WS R+ Sbjct: 666 SGRARGGTRRGGGTGRPSRRARWSRTRA 583
>LOC_Os05g46370:12005.t04125:unspliced-genomic helix-loop-helix DNA-binding domain containing protein, expressed| Length = 1456 Score = 32.2 bits (64), Expect = 5.9 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +2 / +2 Query: 365 PPCTYQ*PLLLHCPRRSSRRWKP 433 PPC+ + P RSSRRWKP Sbjct: 1010 PPCSTRPPATSSSSSRSSRRWKP 1078
>LOC_Os04g32880:12004.t02966:unspliced-genomic SNF4, putative, expressed| Length = 8077 Score = 32.2 bits (64), Expect = 5.9 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = +1 / +1 Query: 892 RVSLDLGVPCYLHTTFCC 945 R S+ + VPCYL+TTF C Sbjct: 2896 R*SISIPVPCYLYTTFLC 2949
>LOC_Os02g36960:12002.t03333:unspliced-genomic expressed protein| Length = 4511 Score = 32.2 bits (64), Expect = 5.9 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = +2 / +1 Query: 197 PA*SNSSRAMTRSR*KGGPGNPSRRRSWSNKRSLRTMGG 313 P+ S+ SR + +G G PSR R W R RT GG Sbjct: 496 PSPSSRSRTGPTTAPRGPWGPPSRGRGWRRPRGRRTGGG 612
>LOC_Os01g62160:12001.t05592:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class, expressed| Length = 3738 Score = 32.2 bits (64), Expect = 5.9 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +1 / -1 Query: 307 GRELPTEPKSSPAPGWSLPPP 369 GR PT P+ +PAP PPP Sbjct: 174 GRSRPTNPRRAPAPASPAPPP 112
>LOC_Os01g16750:12001.t01524:unspliced-genomic disulfide oxidoreductase/ monooxygenase/ oxidoreductase, putative| Length = 2118 Score = 32.2 bits (64), Expect = 5.9 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = +2 / -3 Query: 212 SSRAMTRSR*KGGPGNPSRRRSWSNKRSLRTMG 310 S+ RSR G PG P R R W +R R G Sbjct: 703 SAAPSPRSRPPGSPGAPRRARRWRRRRRRRRRG 605
>LOC_Os05g16160:12005.t01387:unspliced-genomic conserved hypothetical protein| Length = 549 Score = 27.6 bits (54), Expect(2) = 6.0 Identities = 13/23 (56%), Positives = 13/23 (56%) Frame = +3 / +3 Query: 564 PLAVHRREGRVRRVLQEQCAGPA 632 P VHRR VRRV AGPA Sbjct: 183 PADVHRRLAAVRRVRHRLRAGPA 251 Score = 24.0 bits (46), Expect(2) = 6.0 Identities = 5/14 (35%), Positives = 10/14 (71%) Frame = +1 / +2 Query: 913 VPCYLHTTFCCNIK 954 + C+L T+CC ++ Sbjct: 410 ISCFLAATYCCRVQ 451
>LOC_Os06g48500:12006.t04536:unspliced-genomic expressed protein| Length = 2104 Score = 28.6 bits (56), Expect(2) = 6.2 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = +3 / +3 Query: 261 QAEEGRGATRGASGQW 308 + EEGRGA G SG W Sbjct: 675 EEEEGRGAAAGGSGWW 722 Score = 24.9 bits (48), Expect(2) = 6.2 Identities = 9/18 (50%), Positives = 10/18 (55%) Frame = +2 / +2 Query: 362 HPPCTYQ*PLLLHCPRRS 415 HPP P LLH P R+ Sbjct: 1214 HPPLLLHPPRLLHLPHRA 1267
>LOC_Os05g48800:12005.t04314:unspliced-genomic fiber protein Fb2, putative, expressed| Length = 3528 Score = 30.9 bits (61), Expect(2) = 7.2 Identities = 9/20 (45%), Positives = 14/20 (70%) Frame = +3 / +1 Query: 21 GGFSWPRQSSVRWSARPSVR 80 G +WP QS++RW+A + R Sbjct: 31 GAAAWPHQSTIRWAATKATR 90 Score = 23.1 bits (44), Expect(2) = 7.2 Identities = 10/29 (34%), Positives = 15/29 (51%) Frame = +2 / +2 Query: 224 MTRSR*KGGPGNPSRRRSWSNKRSLRTMG 310 + RSR*+GG P R + + +T G Sbjct: 167 LVRSR*RGGGRRPRESRPGAQRIKKKTRG 253
>LOC_Os11g47640:12011.t04259:unspliced-genomic expressed protein| Length = 3864 Score = 24.4 bits (47), Expect(2) = 7.2 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = +1 / -1 Query: 310 RELPTEPKSSPAPGWSLPPP 369 R P+ P SPAP S P P Sbjct: 1425 RPRPSPPPCSPAPASSPPTP 1366 Score = 24.4 bits (47), Expect(2) = 7.2 Identities = 9/22 (40%), Positives = 10/22 (45%) Frame = +3 / -1 Query: 345 SWVVTATPHVPTSDPCCSTAPA 410 SW TP PTS + PA Sbjct: 1329 SWTTATTPSRPTSSSASLSTPA 1264
>LOC_Os07g46470:12007.t04283:unspliced-genomic hypothetical protein| Length = 3412 Score = 24.4 bits (47), Expect(2) = 7.3 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = +1 / -2 Query: 310 RELPTEPKSSPAPGWSLPPP 369 R P+ P SPAP S P P Sbjct: 1548 RPRPSPPPCSPAPASSPPTP 1489 Score = 24.4 bits (47), Expect(2) = 7.3 Identities = 9/22 (40%), Positives = 10/22 (45%) Frame = +3 / -2 Query: 345 SWVVTATPHVPTSDPCCSTAPA 410 SW TP PTS + PA Sbjct: 1452 SWTTATTPSRPTSSSASLSTPA 1387
>LOC_Os02g13020:12002.t01099:unspliced-genomic expressed protein| Length = 1897 Score = 24.9 bits (48), Expect(2) = 7.7 Identities = 10/20 (50%), Positives = 11/20 (55%) Frame = +1 / -2 Query: 310 RELPTEPKSSPAPGWSLPPP 369 R P+ P SPAP S P P Sbjct: 711 RPRPSPPPCSPAPALSPPTP 652 Score = 24.0 bits (46), Expect(2) = 7.7 Identities = 9/22 (40%), Positives = 10/22 (45%) Frame = +3 / -2 Query: 345 SWVVTATPHVPTSDPCCSTAPA 410 SW TP PTS + PA Sbjct: 615 SWTTAMTPSRPTSSSASLSTPA 550
>LOC_Os12g37960:12012.t03477:unspliced-genomic diaminopimelate epimerase, putative, expressed| Length = 5630 Score = 27.2 bits (53), Expect(2) = 8.0 Identities = 9/25 (36%), Positives = 13/25 (52%) Frame = +1 / +1 Query: 295 PQDNGRELPTEPKSSPAPGWSLPPP 369 P R T P+++ +P W PPP Sbjct: 100 PGAASRSAGTPPRAAASPRWPCPPP 174 Score = 27.2 bits (53), Expect(2) = 8.0 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = +1 / +2 Query: 844 SCRLILLWDCTSLGE 888 SCR LLW C SLG+ Sbjct: 3893 SCRGCLLWICCSLGQ 3937
>LOC_Os12g01520:12012.t00051:unspliced-genomic ubiquitin-activating enzyme E1 2, putative, expressed| Length = 5451 Score = 31.8 bits (63), Expect = 8.1 Identities = 16/31 (51%), Positives = 18/31 (58%) Frame = -3 / -3 Query: 411 RRGQWSSRGHW*VHGGWQ*PPRSRAALGFSW 319 RRG SRGH GG + P RSRA +SW Sbjct: 535 RRGASWSRGHRRRAGGCEGPHRSRALCRWSW 443
>LOC_Os11g26080:12011.t02224:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 6526 Score = 31.8 bits (63), Expect = 8.1 Identities = 14/48 (29%), Positives = 28/48 (58%) Frame = +2 / +3 Query: 182 QSG*APA*SNSSRAMTRSR*KGGPGNPSRRRSWSNKRSLRTMGGNFQL 325 +SG A + ++R+ ++R +GG G RRR W+ + ++ G ++L Sbjct: 4233 ESGGETARTWAARSHGQARARGGGGGQKRRRRWTARAAMAVAGPGWRL 4376
>LOC_Os10g34040:12010.t02706:unspliced-genomic nodulin, putative, expressed| Length = 3196 Score = 31.8 bits (63), Expect = 8.1 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = +3 / +3 Query: 315 TSN*TQEQPCSWVVTATPHVPTSDPCCSTAPA 410 +S ++ +P +W ATP PTS PC + + A Sbjct: 2814 SSTPSRRRPRAWWPWATPRAPTSPPCSARSAA 2909
>LOC_Os08g44820:12008.t04205:unspliced-genomic no apical meristem protein, expressed| Length = 4657 Score = 31.8 bits (63), Expect = 8.1 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = -2 / +1 Query: 751 SAPTHNPSSSATTEQLPWHHRSASP 677 SAPT + +S+A+T + P HHRS P Sbjct: 502 SAPTGSCTSTASTAKPPSHHRSPHP 576
>LOC_Os05g27570:12005.t02408:unspliced-genomic SAG20, putative| Length = 1566 Score = 31.8 bits (63), Expect = 8.1 Identities = 13/31 (41%), Positives = 21/31 (67%) Frame = +2 / +2 Query: 215 SRAMTRSR*KGGPGNPSRRRSWSNKRSLRTM 307 SRA TR+ + G G+P RRR+ + +R+ T+ Sbjct: 683 SRACTRTSARSGGGSPGRRRARATRRNPTTL 775
>LOC_Os04g30430:12004.t02729:unspliced-genomic RNA-binding protein-like, putative, expressed| Length = 4966 Score = 31.8 bits (63), Expect = 8.1 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = +3 / -2 Query: 327 TQEQPCSWVVTATPHVPTSDPCCSTA 404 T P W VT+T P SD C STA Sbjct: 654 TSSLPVRWPVTSTVTPPPSDSCASTA 577
>LOC_Os01g49410:12001.t04380:unspliced-genomic expressed protein| Length = 1292 Score = 31.8 bits (63), Expect = 8.1 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = +2 / -2 Query: 260 PSRRRSWSNKRSLRTMGG 313 P+R RSWS+ ++RTMGG Sbjct: 199 PARWRSWSSTAAMRTMGG 146
>LOC_Os01g41430:12001.t03663:unspliced-genomic flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative,| expressed Length = 1964 Score = 31.8 bits (63), Expect = 8.1 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = -2 / +2 Query: 757 AHSAPTHNPSSSATTEQLPW 698 +HSAPTH TTE LPW Sbjct: 35 SHSAPTHAA*LGVTTEWLPW 94
>LOC_Os01g12270:12001.t01095:unspliced-genomic hypothetical protein| Length = 264 Score = 31.8 bits (63), Expect = 8.1 Identities = 14/22 (63%), Positives = 16/22 (72%) Frame = +2 / -3 Query: 212 SSRAMTRSR*KGGPGNPSRRRS 277 S+RA TR R GG G+P RRRS Sbjct: 193 STRAGTRRRPHGGSGSPCRRRS 128
>LOC_Os05g35480:12005.t03141:unspliced-genomic phosphoribosylanthranilate transferase, putative, expressed| Length = 3071 Score = 25.8 bits (50), Expect(2) = 9.9 Identities = 8/18 (44%), Positives = 10/18 (55%) Frame = +1 / +3 Query: 316 LPTEPKSSPAPGWSLPPP 369 +P P P PG +PPP Sbjct: 144 MPPRPFMMPGPGGPMPPP 197 Score = 22.6 bits (43), Expect(2) = 9.9 Identities = 7/9 (77%), Positives = 7/9 (77%) Frame = +2 / +1 Query: 401 CPRRSSRRW 427 CPRRSS W Sbjct: 187 CPRRSSSAW 213 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 309,508,024 Number of extensions: 4362586 Number of successful extensions: 29469 Number of sequences better than 10.0: 59 Length of query: 331 Length of database: 55,613,886 Length adjustment: 50 Effective length of query: 281 Effective length of database: 52,799,986 Effective search space: 14836796066 Effective search space used: 14836796066 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
