>gb|AY108725.1| Zea mays PCO112154 mRNA sequence
          Length = 965
 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                       
Query: 505 gagctcaccaagagggccaaggagctgcacgacaaggagttcaagctgccgtaccagaac 564
           ||||||| |||||| || ||||||||||||||||||||||||||||| || |||||||| 
Sbjct: 486 gagctcagcaagagagcaaaggagctgcacgacaaggagttcaagctaccataccagaaa 545

                                     
Query: 565 ccctcgccgtgcaccgacgagagggc 590
           |||  ||| |||||| | ||||||||
Sbjct: 546 cccatgccctgcacccaggagagggc 571



 Score = 50.1 bits (25), Expect = 0.015
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 163 tctgccatgggtgactacacaatccggataagcacca 199
           ||||| ||||||||||||||||||| ||| |||||||
Sbjct: 141 tctgcaatgggtgactacacaatccagattagcacca 177

>emb|CT833444.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA120C18, full
           insert sequence
          Length = 1341

 Score = 67.9 bits (34), Expect = 7e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                 
Query: 535 gacaaggagttcaagctgccgtaccagaacccctcgccgtgcaccgacgagagg 588
           |||||||||||||||||||||||||| |||||| |||| ||||| || ||||||
Sbjct: 552 gacaaggagttcaagctgccgtaccaaaaccccacgccatgcactgaggagagg 605



 Score = 46.1 bits (23), Expect = 0.24
 Identities = 85/105 (80%), Gaps = 3/105 (2%)
 Strand = Plus / Plus

                                                                       
Query: 169 atgggtgactacacaatccggataagcaccagcttgatcgaacagctcgcgcgcgatgac 228
           |||||||||||||| |||| ||| |||||||   | ||||| ||||| || || ||||||
Sbjct: 189 atgggtgactacaccatccagattagcaccaagctcatcgaccagcttgctcgtgatgac 248

                                                        
Query: 229 gagaagcaggtgaaaaggaggaccaggaaacccaagccgaagaag 273
           ||||   || | |||| ||  ||||||||||||||||| ||||||
Sbjct: 249 gaga---agatcaaaaagaaaaccaggaaacccaagcctaagaag 290

>ref|NM_001060930.1| Oryza sativa (japonica cultivar-group) Os05g0103500 (Os05g0103500)
           mRNA, complete cds
          Length = 1002

 Score = 67.9 bits (34), Expect = 7e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                 
Query: 535 gacaaggagttcaagctgccgtaccagaacccctcgccgtgcaccgacgagagg 588
           |||||||||||||||||||||||||| |||||| |||| ||||| || ||||||
Sbjct: 542 gacaaggagttcaagctgccgtaccaaaaccccacgccatgcactgaggagagg 595



 Score = 46.1 bits (23), Expect = 0.24
 Identities = 85/105 (80%), Gaps = 3/105 (2%)
 Strand = Plus / Plus

                                                                       
Query: 169 atgggtgactacacaatccggataagcaccagcttgatcgaacagctcgcgcgcgatgac 228
           |||||||||||||| |||| ||| |||||||   | ||||| ||||| || || ||||||
Sbjct: 179 atgggtgactacaccatccagattagcaccaagctaatcgaccagcttgctcgtgatgac 238

                                                        
Query: 229 gagaagcaggtgaaaaggaggaccaggaaacccaagccgaagaag 273
           ||||   || | |||| ||  ||||||||||||||||| ||||||
Sbjct: 239 gaga---agatcaaaaagaaaaccaggaaacccaagcctaagaag 280

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score = 67.9 bits (34), Expect = 7e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                    
Query: 535    gacaaggagttcaagctgccgtaccagaacccctcgccgtgcaccgacgagagg 588
              |||||||||||||||||||||||||| |||||| |||| ||||| || ||||||
Sbjct: 164797 gacaaggagttcaagctgccgtaccaaaaccccacgccatgcactgaggagagg 164744



 Score = 46.1 bits (23), Expect = 0.24
 Identities = 85/105 (80%), Gaps = 3/105 (2%)
 Strand = Plus / Minus

                                                                          
Query: 169    atgggtgactacacaatccggataagcaccagcttgatcgaacagctcgcgcgcgatgac 228
              |||||||||||||| |||| ||| |||||||   | ||||| ||||| || || ||||||
Sbjct: 165160 atgggtgactacaccatccagattagcaccaagctaatcgaccagcttgctcgtgatgac 165101

                                                           
Query: 229    gagaagcaggtgaaaaggaggaccaggaaacccaagccgaagaag 273
              ||||   || | |||| ||  ||||||||||||||||| ||||||
Sbjct: 165100 gaga---agatcaaaaagaaaaccaggaaacccaagcctaagaag 165059

>dbj|AK102829.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109D16, full
           insert sequence
          Length = 941

 Score = 67.9 bits (34), Expect = 7e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                 
Query: 535 gacaaggagttcaagctgccgtaccagaacccctcgccgtgcaccgacgagagg 588
           |||||||||||||||||||||||||| |||||| |||| ||||| || ||||||
Sbjct: 546 gacaaggagttcaagctgccgtaccaaaaccccacgccatgcactgaggagagg 599



 Score = 46.1 bits (23), Expect = 0.24
 Identities = 85/105 (80%), Gaps = 3/105 (2%)
 Strand = Plus / Plus

                                                                       
Query: 169 atgggtgactacacaatccggataagcaccagcttgatcgaacagctcgcgcgcgatgac 228
           |||||||||||||| |||| ||| |||||||   | ||||| ||||| || || ||||||
Sbjct: 183 atgggtgactacaccatccagattagcaccaagctaatcgaccagcttgctcgtgatgac 242

                                                        
Query: 229 gagaagcaggtgaaaaggaggaccaggaaacccaagccgaagaag 273
           ||||   || | |||| ||  ||||||||||||||||| ||||||
Sbjct: 243 gaga---agatcaaaaagaaaaccaggaaacccaagcctaagaag 284

>dbj|AK060306.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-A10, full
           insert sequence
          Length = 1002

 Score = 67.9 bits (34), Expect = 7e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                 
Query: 535 gacaaggagttcaagctgccgtaccagaacccctcgccgtgcaccgacgagagg 588
           |||||||||||||||||||||||||| |||||| |||| ||||| || ||||||
Sbjct: 542 gacaaggagttcaagctgccgtaccaaaaccccacgccatgcactgaggagagg 595



 Score = 46.1 bits (23), Expect = 0.24
 Identities = 85/105 (80%), Gaps = 3/105 (2%)
 Strand = Plus / Plus

                                                                       
Query: 169 atgggtgactacacaatccggataagcaccagcttgatcgaacagctcgcgcgcgatgac 228
           |||||||||||||| |||| ||| |||||||   | ||||| ||||| || || ||||||
Sbjct: 179 atgggtgactacaccatccagattagcaccaagctaatcgaccagcttgctcgtgatgac 238

                                                        
Query: 229 gagaagcaggtgaaaaggaggaccaggaaacccaagccgaagaag 273
           ||||   || | |||| ||  ||||||||||||||||| ||||||
Sbjct: 239 gaga---agatcaaaaagaaaaccaggaaacccaagcctaagaag 280

>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12,
             complete sequence
          Length = 160603

 Score = 67.9 bits (34), Expect = 7e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                   
Query: 535   gacaaggagttcaagctgccgtaccagaacccctcgccgtgcaccgacgagagg 588
             |||||||||||||||||||||||||| |||||| |||| ||||| || ||||||
Sbjct: 46981 gacaaggagttcaagctgccgtaccaaaaccccacgccatgcactgaggagagg 46928



 Score = 46.1 bits (23), Expect = 0.24
 Identities = 85/105 (80%), Gaps = 3/105 (2%)
 Strand = Plus / Minus

                                                                         
Query: 169   atgggtgactacacaatccggataagcaccagcttgatcgaacagctcgcgcgcgatgac 228
             |||||||||||||| |||| ||| |||||||   | ||||| ||||| || || ||||||
Sbjct: 47344 atgggtgactacaccatccagattagcaccaagctaatcgaccagcttgctcgtgatgac 47285

                                                          
Query: 229   gagaagcaggtgaaaaggaggaccaggaaacccaagccgaagaag 273
             ||||   || | |||| ||  ||||||||||||||||| ||||||
Sbjct: 47284 gaga---agatcaaaaagaaaaccaggaaacccaagcctaagaag 47243

>gb|AC012307.8| Homo sapiens BAC clone RP11-574O17 from 2, complete sequence
          Length = 145918

 Score = 46.1 bits (23), Expect = 0.24
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 334   agcagccctgctcctgggtggtc 356
             |||||||||||||||||||||||
Sbjct: 27317 agcagccctgctcctgggtggtc 27295

>ref|XM_321588.2| Anopheles gambiae str. PEST ENSANGP00000009609 (ENSANGG00000007194),
            partial mRNA
          Length = 5145

 Score = 46.1 bits (23), Expect = 0.24
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 456  cgagaaggtgctggagaagctgc 478
            |||||||||||||||||||||||
Sbjct: 1701 cgagaaggtgctggagaagctgc 1723

>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence
          Length = 22422827

 Score = 44.1 bits (22), Expect = 0.95
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 534      cgacaaggagttcaagctgccg 555
                ||||||||||||||||||||||
Sbjct: 11469638 cgacaaggagttcaagctgccg 11469659

>gb|AC154047.2| Drosophila melanogaster clone BACR26B05, complete sequence
          Length = 162638

 Score = 44.1 bits (22), Expect = 0.95
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 534   cgacaaggagttcaagctgccg 555
             ||||||||||||||||||||||
Sbjct: 92224 cgacaaggagttcaagctgccg 92203

>ref|NM_132503.2| Drosophila melanogaster CG11696-RA (CG11696), mRNA
          Length = 2163

 Score = 44.1 bits (22), Expect = 0.95
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 534  cgacaaggagttcaagctgccg 555
            ||||||||||||||||||||||
Sbjct: 1677 cgacaaggagttcaagctgccg 1698

>gb|AY061244.1| Drosophila melanogaster LD18373 full length cDNA
          Length = 2218

 Score = 44.1 bits (22), Expect = 0.95
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 534  cgacaaggagttcaagctgccg 555
            ||||||||||||||||||||||
Sbjct: 1677 cgacaaggagttcaagctgccg 1698

>gb|AC091712.3| Rattus norvegicus strain Brown Norway clone RP31-64M17, complete
             sequence
          Length = 157848

 Score = 44.1 bits (22), Expect = 0.95
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 229   gagaagcaggtgaaaaggagga 250
             ||||||||||||||||||||||
Sbjct: 84545 gagaagcaggtgaaaaggagga 84524

>gb|AC182645.3| Pan troglodytes BAC clone CH251-7F19 from chromosome 10, complete
            sequence
          Length = 221731

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 394  gctccactgcccccgccggtc 414
            |||||||||||||||||||||
Sbjct: 9962 gctccactgcccccgccggtc 9942

>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 642    cgaggcggtgaagaggttcgaggcg 666
              |||||||||||||||||||| ||||
Sbjct: 496359 cgaggcggtgaagaggttcgcggcg 496335

>ref|XM_615349.2| PREDICTED: Bos taurus similar to myosin, heavy polypeptide 13,
           skeletal muscle (LOC535303), mRNA
          Length = 2634

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 468 ggagaagctgcagaagaagga 488
           |||||||||||||||||||||
Sbjct: 144 ggagaagctgcagaagaagga 164

>gb|AC133203.3| Mus musculus BAC clone RP23-85M7 from chromosome 15, complete sequence
          Length = 227133

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 897    gtccttagatttgggggttcc 917
              |||||||||||||||||||||
Sbjct: 209415 gtccttagatttgggggttcc 209435

>gb|AC122261.2| Mus musculus BAC clone RP23-187F24 from 15, complete sequence
          Length = 223801

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 897   gtccttagatttgggggttcc 917
             |||||||||||||||||||||
Sbjct: 52020 gtccttagatttgggggttcc 52040

>gb|AC068139.6| Homo sapiens chromosome 10 clone RP11-506M13, complete sequence
          Length = 178785

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 394    gctccactgcccccgccggtc 414
              |||||||||||||||||||||
Sbjct: 116972 gctccactgcccccgccggtc 116952

>emb|BX248123.5| Human DNA sequence from clone RP11-589B3 on chromosome 10 Contains a
             ribosomal protein S12 (RPS12) pseudogene, the SFTPA2 gene
             for surfactant, pulmonary-associated protein A2 (SP-A2,
             SPAII, COLEC5), a mannose-binding lectin (protein C) 2,
             soluble (opsonic defect) (MBL2) pseudogene, a pseudogene
             similar to part of surfactant pulmonary-associated
             protein, the SFTPA1 gene for surfactant,
             pulmonary-associated protein A1 (PSAP, PSPA, SP-A, SFTP1,
             SP-A1, COLEC4) and a novel gene, complete sequence
          Length = 134627

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 394   gctccactgcccccgccggtc 414
             |||||||||||||||||||||
Sbjct: 93023 gctccactgcccccgccggtc 93003

>emb|AL354827.5| Human DNA sequence from clone RP11-280J7 on chromosome 13, complete
             sequence
          Length = 127641

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 461   aggtgctggagaagctgcaga 481
             |||||||||||||||||||||
Sbjct: 24622 aggtgctggagaagctgcaga 24642

>gb|S65562.1| SP-A I {5' region, promoter} [human, HeLa cells, Genomic, 2660 nt]
          Length = 2660

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 394 gctccactgcccccgccggtc 414
           |||||||||||||||||||||
Sbjct: 450 gctccactgcccccgccggtc 430

>gb|AC154592.2| Mus musculus BAC clone RP23-249J17 from chromosome 14, complete sequence
          Length = 211647

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 231    gaagcaggtgaaaaggaggaccagg 255
              ||||||||||| |||||||||||||
Sbjct: 132218 gaagcaggtgagaaggaggaccagg 132194

>gb|AY198391.1| Homo sapiens surfactant, pulmonary-associated protein A1 (SFTPA1)
            gene, complete cds
          Length = 24037

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 394  gctccactgcccccgccggtc 414
            |||||||||||||||||||||
Sbjct: 8105 gctccactgcccccgccggtc 8085

>gb|AC154250.2| Mus musculus BAC clone RP24-193A14 from 14, complete sequence
          Length = 146388

 Score = 42.1 bits (21), Expect = 3.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 231    gaagcaggtgaaaaggaggaccagg 255
              ||||||||||| |||||||||||||
Sbjct: 109581 gaagcaggtgagaaggaggaccagg 109605


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 138,769,384
Number of extensions: 8448514
Number of successful extensions: 170135
Number of sequences better than 10.0: 26
Number of HSP's gapped: 170135
Number of HSP's successfully gapped: 33
Length of query: 995
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 972
Effective length of database: 18,503,978,556
Effective search space: 17985867156432
Effective search space used: 17985867156432
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)