Clone Name | FLbaf98f16 |
---|---|
Clone Library Name | barley_pub |
>Q3UV71:TMTC1_MOUSE Transmembrane and TPR repeat-containing protein 1 - Mus musculus| (Mouse) Length = 942 Score = 41.2 bits (95), Expect = 0.010 Identities = 42/191 (21%), Positives = 75/191 (39%), Gaps = 7/191 (3%) Frame = +2 Query: 599 ALRYAAQLREAEPGEVEWRLLEALLHELKGDIATAERLFQEVLAEKPLLVRALHGLALCM 778 AL + +P + E RL A + + G AE++ +++E+P + L+ Sbjct: 762 ALEVYREAVSLQPSQRELRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLECYRLLSAIH 821 Query: 779 HKRLEGPTVFEMLEKALQLAESEERVPEERNIKLLIAQMHVVKGD-------LDVASEKL 937 K+ E +EKALQL + +V I+++ KG+ LD A E Sbjct: 822 SKQEHHGKALEAIEKALQLKPKDPKV---------ISELFFTKGNQLREQNLLDKAFESY 872 Query: 938 RTLINEDPRDFRPHLCQGIVYALLDKKEEADEQFDVYRSLVPDEFPDKSFINDVILSAKV 1117 + DP + + G + + A ++ LVPD +L + Sbjct: 873 EAAVTLDPDQAQAWMNMGGIRHIQGSYVSARAYYERALKLVPD---------SKLLKENL 923 Query: 1118 ESKDRLQKDLR 1150 DRL++ L+ Sbjct: 924 AKLDRLERRLQ 934
>Q28DB5:ALAT2_XENTR Alanine aminotransferase 2 - Xenopus tropicalis (Western clawed| frog) (Silurana tropicalis) Length = 524 Score = 35.8 bits (81), Expect = 0.43 Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 1/119 (0%) Frame = +2 Query: 509 YLEVLSEDPGDVDALKCVLFARMRRKDWGGALRYAAQLREAEPGEVEWRLLEALLHELKG 688 Y+EV++ DP L ++ R+ G AL + +PGE ++ A + G Sbjct: 354 YMEVINMDPAVKQQLTKLVSVRLCPPVPGQALLDVI-VNPPKPGEPSYKQFMAEKQAVLG 412 Query: 689 DIATAERLFQEVLAEKP-LLVRALHGLALCMHKRLEGPTVFEMLEKALQLAESEERVPE 862 ++A RL +E+L + P + + G A+ R+ P EKA++LA++E + P+ Sbjct: 413 NLAEKARLTEEILNQSPGIRCNPVQG-AMYSFPRIHIP------EKAIKLAQAEGQAPD 464
>Q02817:MUC2_HUMAN Mucin-2 precursor - Homo sapiens (Human)| Length = 5179 Score = 34.3 bits (77), Expect = 1.2 Identities = 24/79 (30%), Positives = 34/79 (43%) Frame = +2 Query: 11 TAPAMAMSFLSTANTSFVPFRRLSRHKPTTTPSLPFPTNPHRSPACCLLPAERRRFSTPS 190 T P T T P + PTTTPS P T P SP + +TPS Sbjct: 1650 TPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTP--SPPTTTM-------TTPS 1700 Query: 191 SSKTPATNLLSSITAASRT 247 + TP++ + ++ T +S T Sbjct: 1701 PTTTPSSPITTTTTPSSTT 1719
>O14686:MLL2_HUMAN Myeloid/lymphoid or mixed-lineage leukemia protein 2 - Homo sapiens| (Human) Length = 5262 Score = 34.3 bits (77), Expect = 1.2 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = +1 Query: 118 PHQPAPLARLLPSPCRTPALLHPVLFQDPRHQPPL 222 P +P P L PSP P + P + DP QPPL Sbjct: 2074 PQEPPPAQALAPSPPSHPDIFRPGSYTDPYAQPPL 2108
>P54674:PI3K2_DICDI Phosphatidylinositol 3-kinase 2 - Dictyostelium discoideum (Slime| mold) Length = 1858 Score = 33.1 bits (74), Expect = 2.8 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 6/73 (8%) Frame = +2 Query: 41 STANTSFVPFRRLSRHKPTTTPSLPFPTNPHRSPACC----LLPAERRRFSTP--SSSKT 202 S++ ++ VP +LS T +PS PT P S L+P+++++ T SSS T Sbjct: 380 SSSTSTVVPIVQLSSSNSTNSPSTSLPTTPRLSQPTTSYTQLIPSQQQQQPTESNSSSNT 439 Query: 203 PATNLLSSITAAS 241 T SS +++S Sbjct: 440 NTTTTSSSSSSSS 452
>P35748:MYH11_RABIT Myosin-11 - Oryctolagus cuniculus (Rabbit)| Length = 1972 Score = 33.1 bits (74), Expect = 2.8 Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 7/155 (4%) Frame = +2 Query: 512 LEVLSEDPGDVDALKCVLFARMRRKDWGGALRYAAQLRE-----AEPGEVEWRLLEALLH 676 L+ S G +A+K +L + + KD+ L A R+ A+ E + + LEA L Sbjct: 1631 LQADSAIKGREEAIKQLLKLQAQMKDFQRELEDARASRDEIFATAKENEKKAKSLEADLM 1690 Query: 677 ELKGDIATAERLFQEVLAEKPLLVRALHGLALCMHKRLEGPTVFEMLEKALQ--LAESEE 850 +L+ D+A AER ++ EK L L L G + ++ L+ +A+ EE Sbjct: 1691 QLQEDLAAAERARKQADLEKEELAEEL-------ASSLSGRNALQDEKRRLEARIAQLEE 1743 Query: 851 RVPEERNIKLLIAQMHVVKGDLDVASEKLRTLINE 955 + EE+ M + + A+++ L NE Sbjct: 1744 ELEEEQ------GNMEAMSDRVRKATQQAEQLSNE 1772
>Q86TV6:TTC7B_HUMAN Tetratricopeptide repeat protein 7B - Homo sapiens (Human)| Length = 741 Score = 32.7 bits (73), Expect = 3.6 Identities = 18/60 (30%), Positives = 32/60 (53%) Frame = +2 Query: 677 ELKGDIATAERLFQEVLAEKPLLVRALHGLALCMHKRLEGPTVFEMLEKALQLAESEERV 856 EL+G + A R ++E LA P V+++ LAL +H+ ++L A+Q+ + V Sbjct: 639 ELRGSMDEARRWYEEALAISPTHVKSMQRLALILHQLGRYSLAEKILRDAVQVNSTAHEV 698
>Q9I7U4:TITIN_DROME Titin - Drosophila melanogaster (Fruit fly)| Length = 18074 Score = 32.7 bits (73), Expect = 3.6 Identities = 25/114 (21%), Positives = 56/114 (49%) Frame = +2 Query: 818 EKALQLAESEERVPEERNIKLLIAQMHVVKGDLDVASEKLRTLINEDPRDFRPHLCQGIV 997 E+AL ++EE +P+E K + + K K + + E+P +F + + Sbjct: 15100 EQALVTPKAEEPIPQEIEDKAIDDEKKPKKSKPKKVQPKEQEIAKEEPEEFEVSVKE--E 15157 Query: 998 YALLDKKEEADEQFDVYRSLVPDEFPDKSFINDVILSAKVESKDRLQKDLRSEY 1159 AL+DK E ++ DV V ++ P ++ +++V++ + + + +++ EY Sbjct: 15158 EALVDKPIEIEKPKDV---KVKEKKPKEAPVSEVVVIEEEPKPEEVPEEIPVEY 15208
>Q9Z188:DYR1B_MOUSE Dual specificity tyrosine-phosphorylation-regulated kinase 1B - Mus| musculus (Mouse) Length = 629 Score = 26.6 bits (57), Expect(2) = 5.1 Identities = 17/48 (35%), Positives = 20/48 (41%) Frame = -2 Query: 709 PLGGGDVPLELVQQRLQEPPLHLAGLGLPQLCRVAQRAAPVLAPHPGE 566 P GGDVP + Q + L G LP L R R +P P E Sbjct: 515 PWAGGDVPHKTHQAPISASTLPGTGAQLPPLPRCLGRPPSPTSPPPPE 562 Score = 24.3 bits (51), Expect(2) = 5.1 Identities = 14/45 (31%), Positives = 23/45 (51%) Frame = -3 Query: 930 SDATSRSPLTTCICAIRSFMLRSSGTLSSDSASCKAFSNISKTVG 796 S +TS +PL TC + + + SSG S S +A+ ++ G Sbjct: 447 SASTSPAPLDTCPSSSTASSISSSGGSSGSSNDNRAYRYSNRYCG 491
>P37524:YYAA_BACSU Protein yyaA - Bacillus subtilis| Length = 283 Score = 32.0 bits (71), Expect = 6.1 Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 6/121 (4%) Frame = +2 Query: 512 LEVLSEDPGDVDALKCVLFARMRRKDWGGALRYAAQLREAEPGEVEWRLLEALLHELKGD 691 + + +D D + L ++R++ A R E ++ L L + + Sbjct: 101 IPAIIKDFSDTETASVALIENLQREELSSIEEAHAYARLLELHDLTQEALAQRLGKGQST 160 Query: 692 IATAERLF------QEVLAEKPLLVRALHGLALCMHKRLEGPTVFEMLEKALQLAESEER 853 IA RL QE + EK + R L L+ + E++EK+L + ++E+R Sbjct: 161 IANKLRLLKLPQPVQEAIMEKKITERHARALIPLKQPELQVTLLTEIIEKSLNVKQTEDR 220 Query: 854 V 856 V Sbjct: 221 V 221
>Q9ULT0:TTC7A_HUMAN Tetratricopeptide repeat protein 7A - Homo sapiens (Human)| Length = 858 Score = 32.0 bits (71), Expect = 6.1 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 4/55 (7%) Frame = +2 Query: 671 LHELKGDIATAERLFQEVLAEKPLLVRALHGLALCM----HKRLEGPTVFEMLEK 823 L E+KG++ A++L++E L P VR +H L L + HK L + + +E+ Sbjct: 754 LAEVKGNLEEAKQLYKEALTVNPDGVRIMHSLGLMLSRLGHKSLAQKVLRDAVER 808
>O88516:DLL3_MOUSE Delta-like protein 3 precursor - Mus musculus (Mouse)| Length = 592 Score = 32.0 bits (71), Expect = 6.1 Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 1/85 (1%) Frame = +1 Query: 811 DVGESFATRRIRGEGPGRAQHKASDCTD-ACCQG*PGCCIREIENSY*RGSKRFSASSLP 987 D+G + R G R +H DC AC G G C+ GS+R S Sbjct: 368 DLGHALRCRCRAGFAGPRCEHDLDDCAGRACANG--GTCVEG------GGSRRCS----- 414 Query: 988 GHCICTFGQKGGGRRAI*CVQKPCA 1062 C FG + RA C +PCA Sbjct: 415 --CALGFGGRDCRERADPCASRPCA 437
>Q8G3N0:SYP_BIFLO Prolyl-tRNA synthetase - Bifidobacterium longum| Length = 597 Score = 31.6 bits (70), Expect = 8.0 Identities = 45/181 (24%), Positives = 69/181 (38%), Gaps = 12/181 (6%) Frame = +2 Query: 506 MYLEVLSEDPGDVDALKCVLFARMRRKDWGGALRYAAQLREAEPGEVEW--------RLL 661 M+L L EDP D D D L+ A +R+A PG W + Sbjct: 4 MFLRTLREDPADADV------------DSAKLLQRAGYIRKAAPGIWTWLPLGLRVLNKI 51 Query: 662 EALLHELKGDIATAERLFQEVLAEKPLLVRALHGLALCMHKRLE--GPTVFEMLEKALQL 835 EA++ E I E F +L +P A H R E G +F + ++ Sbjct: 52 EAIIREEINGIGAQEVHFPALLPREP--YEATH--------RWEEYGDNIFRLKDR--HE 99 Query: 836 AESEERVPEERNIKLLIAQMHVVKGDLDVASEKLRTLINEDPRDFRPH--LCQGIVYALL 1009 A+ E LL+ M+ DL V +++T + +FRP L +G + + Sbjct: 100 ADYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQIQTKYRD---EFRPRAGLIRGREFVMK 156 Query: 1010 D 1012 D Sbjct: 157 D 157
>Q6YQV5:GIDA_ONYPE tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA -| Onion yellows phytoplasma Length = 617 Score = 31.6 bits (70), Expect = 8.0 Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 10/106 (9%) Frame = -2 Query: 1075 RELIRH-KASVHIKLLVCLLLFVQKCIYNALAKMRPKISWILVNKSSQFL*CNIQVTLDN 899 R L+RH A + +K L + + YN + KI+ +L+ KS + I V DN Sbjct: 430 RLLLRHDNADLRLKDYGYQLGLIDEKDYNNFQNKKAKIN-LLLEKSKNY---EILVNSDN 485 Query: 898 MHLCNQKLYVAL---------FRDPLLGFCELQSFLQHLENSWTFE 788 + Q+ +L + P L FC LQ FLQ + +E Sbjct: 486 LSYLKQQKSASLGEKTTLAQLLKRPELNFCTLQHFLQEKADKTIYE 531 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 182,091,939 Number of extensions: 3769762 Number of successful extensions: 12442 Number of sequences better than 10.0: 14 Number of HSP's gapped: 12421 Number of HSP's successfully gapped: 15 Length of query: 453 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 336 Effective length of database: 68,593,924 Effective search space: 23047558464 Effective search space used: 23047558464 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)