ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf98f16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q3UV71:TMTC1_MOUSE Transmembrane and TPR repeat-containing prote... 41 0.010
2Q28DB5:ALAT2_XENTR Alanine aminotransferase 2 - Xenopus tropical... 36 0.43
3Q02817:MUC2_HUMAN Mucin-2 precursor - Homo sapiens (Human) 34 1.2
4O14686:MLL2_HUMAN Myeloid/lymphoid or mixed-lineage leukemia pro... 34 1.2
5P54674:PI3K2_DICDI Phosphatidylinositol 3-kinase 2 - Dictyosteli... 33 2.8
6P35748:MYH11_RABIT Myosin-11 - Oryctolagus cuniculus (Rabbit) 33 2.8
7Q86TV6:TTC7B_HUMAN Tetratricopeptide repeat protein 7B - Homo sa... 33 3.6
8Q9I7U4:TITIN_DROME Titin - Drosophila melanogaster (Fruit fly) 33 3.6
9Q9Z188:DYR1B_MOUSE Dual specificity tyrosine-phosphorylation-reg... 27 5.1
10P37524:YYAA_BACSU Protein yyaA - Bacillus subtilis 32 6.1
11Q9ULT0:TTC7A_HUMAN Tetratricopeptide repeat protein 7A - Homo sa... 32 6.1
12O88516:DLL3_MOUSE Delta-like protein 3 precursor - Mus musculus ... 32 6.1
13Q8G3N0:SYP_BIFLO Prolyl-tRNA synthetase - Bifidobacterium longum 32 8.0
14Q6YQV5:GIDA_ONYPE tRNA uridine 5-carboxymethylaminomethyl modifi... 32 8.0

>Q3UV71:TMTC1_MOUSE Transmembrane and TPR repeat-containing protein 1 - Mus musculus|
            (Mouse)
          Length = 942
 Score = 41.2 bits (95), Expect = 0.010
 Identities = 42/191 (21%), Positives = 75/191 (39%), Gaps = 7/191 (3%)
 Frame = +2

Query: 599  ALRYAAQLREAEPGEVEWRLLEALLHELKGDIATAERLFQEVLAEKPLLVRALHGLALCM 778
            AL    +    +P + E RL  A +  + G    AE++   +++E+P  +     L+   
Sbjct: 762  ALEVYREAVSLQPSQRELRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLECYRLLSAIH 821

Query: 779  HKRLEGPTVFEMLEKALQLAESEERVPEERNIKLLIAQMHVVKGD-------LDVASEKL 937
             K+       E +EKALQL   + +V         I+++   KG+       LD A E  
Sbjct: 822  SKQEHHGKALEAIEKALQLKPKDPKV---------ISELFFTKGNQLREQNLLDKAFESY 872

Query: 938  RTLINEDPRDFRPHLCQGIVYALLDKKEEADEQFDVYRSLVPDEFPDKSFINDVILSAKV 1117
               +  DP   +  +  G +  +      A   ++    LVPD           +L   +
Sbjct: 873  EAAVTLDPDQAQAWMNMGGIRHIQGSYVSARAYYERALKLVPD---------SKLLKENL 923

Query: 1118 ESKDRLQKDLR 1150
               DRL++ L+
Sbjct: 924  AKLDRLERRLQ 934



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>Q28DB5:ALAT2_XENTR Alanine aminotransferase 2 - Xenopus tropicalis (Western clawed|
           frog) (Silurana tropicalis)
          Length = 524

 Score = 35.8 bits (81), Expect = 0.43
 Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
 Frame = +2

Query: 509 YLEVLSEDPGDVDALKCVLFARMRRKDWGGALRYAAQLREAEPGEVEWRLLEALLHELKG 688
           Y+EV++ DP     L  ++  R+     G AL     +   +PGE  ++   A    + G
Sbjct: 354 YMEVINMDPAVKQQLTKLVSVRLCPPVPGQALLDVI-VNPPKPGEPSYKQFMAEKQAVLG 412

Query: 689 DIATAERLFQEVLAEKP-LLVRALHGLALCMHKRLEGPTVFEMLEKALQLAESEERVPE 862
           ++A   RL +E+L + P +    + G A+    R+  P      EKA++LA++E + P+
Sbjct: 413 NLAEKARLTEEILNQSPGIRCNPVQG-AMYSFPRIHIP------EKAIKLAQAEGQAPD 464



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>Q02817:MUC2_HUMAN Mucin-2 precursor - Homo sapiens (Human)|
          Length = 5179

 Score = 34.3 bits (77), Expect = 1.2
 Identities = 24/79 (30%), Positives = 34/79 (43%)
 Frame = +2

Query: 11   TAPAMAMSFLSTANTSFVPFRRLSRHKPTTTPSLPFPTNPHRSPACCLLPAERRRFSTPS 190
            T P        T  T   P    +   PTTTPS P  T P  SP    +       +TPS
Sbjct: 1650 TPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTP--SPPTTTM-------TTPS 1700

Query: 191  SSKTPATNLLSSITAASRT 247
             + TP++ + ++ T +S T
Sbjct: 1701 PTTTPSSPITTTTTPSSTT 1719



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>O14686:MLL2_HUMAN Myeloid/lymphoid or mixed-lineage leukemia protein 2 - Homo sapiens|
            (Human)
          Length = 5262

 Score = 34.3 bits (77), Expect = 1.2
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +1

Query: 118  PHQPAPLARLLPSPCRTPALLHPVLFQDPRHQPPL 222
            P +P P   L PSP   P +  P  + DP  QPPL
Sbjct: 2074 PQEPPPAQALAPSPPSHPDIFRPGSYTDPYAQPPL 2108



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>P54674:PI3K2_DICDI Phosphatidylinositol 3-kinase 2 - Dictyostelium discoideum (Slime|
           mold)
          Length = 1858

 Score = 33.1 bits (74), Expect = 2.8
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
 Frame = +2

Query: 41  STANTSFVPFRRLSRHKPTTTPSLPFPTNPHRSPACC----LLPAERRRFSTP--SSSKT 202
           S++ ++ VP  +LS    T +PS   PT P  S        L+P+++++  T   SSS T
Sbjct: 380 SSSTSTVVPIVQLSSSNSTNSPSTSLPTTPRLSQPTTSYTQLIPSQQQQQPTESNSSSNT 439

Query: 203 PATNLLSSITAAS 241
             T   SS +++S
Sbjct: 440 NTTTTSSSSSSSS 452



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>P35748:MYH11_RABIT Myosin-11 - Oryctolagus cuniculus (Rabbit)|
          Length = 1972

 Score = 33.1 bits (74), Expect = 2.8
 Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 7/155 (4%)
 Frame = +2

Query: 512  LEVLSEDPGDVDALKCVLFARMRRKDWGGALRYAAQLRE-----AEPGEVEWRLLEALLH 676
            L+  S   G  +A+K +L  + + KD+   L  A   R+     A+  E + + LEA L 
Sbjct: 1631 LQADSAIKGREEAIKQLLKLQAQMKDFQRELEDARASRDEIFATAKENEKKAKSLEADLM 1690

Query: 677  ELKGDIATAERLFQEVLAEKPLLVRALHGLALCMHKRLEGPTVFEMLEKALQ--LAESEE 850
            +L+ D+A AER  ++   EK  L   L          L G    +  ++ L+  +A+ EE
Sbjct: 1691 QLQEDLAAAERARKQADLEKEELAEEL-------ASSLSGRNALQDEKRRLEARIAQLEE 1743

Query: 851  RVPEERNIKLLIAQMHVVKGDLDVASEKLRTLINE 955
             + EE+        M  +   +  A+++   L NE
Sbjct: 1744 ELEEEQ------GNMEAMSDRVRKATQQAEQLSNE 1772



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>Q86TV6:TTC7B_HUMAN Tetratricopeptide repeat protein 7B - Homo sapiens (Human)|
          Length = 741

 Score = 32.7 bits (73), Expect = 3.6
 Identities = 18/60 (30%), Positives = 32/60 (53%)
 Frame = +2

Query: 677 ELKGDIATAERLFQEVLAEKPLLVRALHGLALCMHKRLEGPTVFEMLEKALQLAESEERV 856
           EL+G +  A R ++E LA  P  V+++  LAL +H+        ++L  A+Q+  +   V
Sbjct: 639 ELRGSMDEARRWYEEALAISPTHVKSMQRLALILHQLGRYSLAEKILRDAVQVNSTAHEV 698



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>Q9I7U4:TITIN_DROME Titin - Drosophila melanogaster (Fruit fly)|
          Length = 18074

 Score = 32.7 bits (73), Expect = 3.6
 Identities = 25/114 (21%), Positives = 56/114 (49%)
 Frame = +2

Query: 818   EKALQLAESEERVPEERNIKLLIAQMHVVKGDLDVASEKLRTLINEDPRDFRPHLCQGIV 997
             E+AL   ++EE +P+E   K +  +    K        K + +  E+P +F   + +   
Sbjct: 15100 EQALVTPKAEEPIPQEIEDKAIDDEKKPKKSKPKKVQPKEQEIAKEEPEEFEVSVKE--E 15157

Query: 998   YALLDKKEEADEQFDVYRSLVPDEFPDKSFINDVILSAKVESKDRLQKDLRSEY 1159
              AL+DK  E ++  DV    V ++ P ++ +++V++  +    + + +++  EY
Sbjct: 15158 EALVDKPIEIEKPKDV---KVKEKKPKEAPVSEVVVIEEEPKPEEVPEEIPVEY 15208



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>Q9Z188:DYR1B_MOUSE Dual specificity tyrosine-phosphorylation-regulated kinase 1B - Mus|
           musculus (Mouse)
          Length = 629

 Score = 26.6 bits (57), Expect(2) = 5.1
 Identities = 17/48 (35%), Positives = 20/48 (41%)
 Frame = -2

Query: 709 PLGGGDVPLELVQQRLQEPPLHLAGLGLPQLCRVAQRAAPVLAPHPGE 566
           P  GGDVP +  Q  +    L   G  LP L R   R     +P P E
Sbjct: 515 PWAGGDVPHKTHQAPISASTLPGTGAQLPPLPRCLGRPPSPTSPPPPE 562



 Score = 24.3 bits (51), Expect(2) = 5.1
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -3

Query: 930 SDATSRSPLTTCICAIRSFMLRSSGTLSSDSASCKAFSNISKTVG 796
           S +TS +PL TC  +  +  + SSG  S  S   +A+   ++  G
Sbjct: 447 SASTSPAPLDTCPSSSTASSISSSGGSSGSSNDNRAYRYSNRYCG 491



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>P37524:YYAA_BACSU Protein yyaA - Bacillus subtilis|
          Length = 283

 Score = 32.0 bits (71), Expect = 6.1
 Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 6/121 (4%)
 Frame = +2

Query: 512 LEVLSEDPGDVDALKCVLFARMRRKDWGGALRYAAQLREAEPGEVEWRLLEALLHELKGD 691
           +  + +D  D +     L   ++R++        A  R  E  ++    L   L + +  
Sbjct: 101 IPAIIKDFSDTETASVALIENLQREELSSIEEAHAYARLLELHDLTQEALAQRLGKGQST 160

Query: 692 IATAERLF------QEVLAEKPLLVRALHGLALCMHKRLEGPTVFEMLEKALQLAESEER 853
           IA   RL       QE + EK +  R    L       L+   + E++EK+L + ++E+R
Sbjct: 161 IANKLRLLKLPQPVQEAIMEKKITERHARALIPLKQPELQVTLLTEIIEKSLNVKQTEDR 220

Query: 854 V 856
           V
Sbjct: 221 V 221



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>Q9ULT0:TTC7A_HUMAN Tetratricopeptide repeat protein 7A - Homo sapiens (Human)|
          Length = 858

 Score = 32.0 bits (71), Expect = 6.1
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
 Frame = +2

Query: 671 LHELKGDIATAERLFQEVLAEKPLLVRALHGLALCM----HKRLEGPTVFEMLEK 823
           L E+KG++  A++L++E L   P  VR +H L L +    HK L    + + +E+
Sbjct: 754 LAEVKGNLEEAKQLYKEALTVNPDGVRIMHSLGLMLSRLGHKSLAQKVLRDAVER 808



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>O88516:DLL3_MOUSE Delta-like protein 3 precursor - Mus musculus (Mouse)|
          Length = 592

 Score = 32.0 bits (71), Expect = 6.1
 Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
 Frame = +1

Query: 811  DVGESFATRRIRGEGPGRAQHKASDCTD-ACCQG*PGCCIREIENSY*RGSKRFSASSLP 987
            D+G +   R   G    R +H   DC   AC  G  G C+         GS+R S     
Sbjct: 368  DLGHALRCRCRAGFAGPRCEHDLDDCAGRACANG--GTCVEG------GGSRRCS----- 414

Query: 988  GHCICTFGQKGGGRRAI*CVQKPCA 1062
              C   FG +    RA  C  +PCA
Sbjct: 415  --CALGFGGRDCRERADPCASRPCA 437



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>Q8G3N0:SYP_BIFLO Prolyl-tRNA synthetase - Bifidobacterium longum|
          Length = 597

 Score = 31.6 bits (70), Expect = 8.0
 Identities = 45/181 (24%), Positives = 69/181 (38%), Gaps = 12/181 (6%)
 Frame = +2

Query: 506  MYLEVLSEDPGDVDALKCVLFARMRRKDWGGALRYAAQLREAEPGEVEW--------RLL 661
            M+L  L EDP D D             D    L+ A  +R+A PG   W          +
Sbjct: 4    MFLRTLREDPADADV------------DSAKLLQRAGYIRKAAPGIWTWLPLGLRVLNKI 51

Query: 662  EALLHELKGDIATAERLFQEVLAEKPLLVRALHGLALCMHKRLE--GPTVFEMLEKALQL 835
            EA++ E    I   E  F  +L  +P    A H        R E  G  +F + ++    
Sbjct: 52   EAIIREEINGIGAQEVHFPALLPREP--YEATH--------RWEEYGDNIFRLKDR--HE 99

Query: 836  AESEERVPEERNIKLLIAQMHVVKGDLDVASEKLRTLINEDPRDFRPH--LCQGIVYALL 1009
            A+       E    LL+  M+    DL V   +++T   +   +FRP   L +G  + + 
Sbjct: 100  ADYLLAPTHEEMFTLLVKDMYSSYKDLPVTLYQIQTKYRD---EFRPRAGLIRGREFVMK 156

Query: 1010 D 1012
            D
Sbjct: 157  D 157



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>Q6YQV5:GIDA_ONYPE tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA -|
            Onion yellows phytoplasma
          Length = 617

 Score = 31.6 bits (70), Expect = 8.0
 Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 10/106 (9%)
 Frame = -2

Query: 1075 RELIRH-KASVHIKLLVCLLLFVQKCIYNALAKMRPKISWILVNKSSQFL*CNIQVTLDN 899
            R L+RH  A + +K     L  + +  YN     + KI+ +L+ KS  +    I V  DN
Sbjct: 430  RLLLRHDNADLRLKDYGYQLGLIDEKDYNNFQNKKAKIN-LLLEKSKNY---EILVNSDN 485

Query: 898  MHLCNQKLYVAL---------FRDPLLGFCELQSFLQHLENSWTFE 788
            +    Q+   +L          + P L FC LQ FLQ   +   +E
Sbjct: 486  LSYLKQQKSASLGEKTTLAQLLKRPELNFCTLQHFLQEKADKTIYE 531


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 182,091,939
Number of extensions: 3769762
Number of successful extensions: 12442
Number of sequences better than 10.0: 14
Number of HSP's gapped: 12421
Number of HSP's successfully gapped: 15
Length of query: 453
Length of database: 100,686,439
Length adjustment: 117
Effective length of query: 336
Effective length of database: 68,593,924
Effective search space: 23047558464
Effective search space used: 23047558464
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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