>Q6J163:5NG4_PINTA Auxin-induced protein 5NG4 - Pinus taeda (Loblolly pine)|
          Length = 410
 Score =  179 bits (455), Expect = 2e-44
 Identities = 103/318 (32%), Positives = 161/318 (50%), Gaps = 1/318 (0%)
 Frame = +1

Query: 232  NIFYKLAVSDGMDMRVLVAYRFLFASAVLAPIAYFVERKKRTKVTWRVLLLSFVCGLCGG 411
            +I  + A++ G+   V   YR + A  ++ P AYF+E+K+R  +T   L+  F+  LCG 
Sbjct: 34   HIVSRAALNMGVSKVVFPVYRNILALMLIGPCAYFLEKKERPALTLSFLIQFFLLALCGI 93

Query: 412  SLAQNLYISGMKLTSATFASAMTNLIPAITFVLAVLFRYERLAIRTLAGQAKVTGTMLGV 591
            +    +    + L   TFASA+ N +PAITF++A   R E++ I    G AK+ GT+  V
Sbjct: 94   TGQSRILSLRIVLHIPTFASAIQNSVPAITFIMAAALRLEKVHISRRDGLAKIIGTVACV 153

Query: 592  GGAMLLTFHKGAQVT-LWPPTHINLAAQLAARHQHDDHNHASSAVHPDSGNRAMGSLLCT 768
             GA ++T +KG  +T +W P ++ + A      Q +D       +   S N  +G +   
Sbjct: 154  SGATIITLYKGPPITHIWRP-NLEVTASYFKAFQGND-------LSAKSENWTLGCIYLL 205

Query: 769  GSCFFYALWLILQARLSREYPFHYSTTALMRAMSALQSAAFALCFDRDLLQWRLSSGVRL 948
            G+C  ++ W++LQA + + YP   S T+       +Q    A  F+ DL  W++ SG  L
Sbjct: 206  GNCLAWSGWIVLQAPVLKRYPARLSVTSFTCFFGVIQFLIIAAFFETDLEHWKIHSGGEL 265

Query: 949  LAVLYTGVVASGVMLVVLSWCVKRRGPLFASVFNPMMXXXXXXXXXXXXXXXXXXXXXXX 1128
              +LY G VASG+   V  WC+ R GP+F +V+ P+                        
Sbjct: 266  FTILYAGFVASGIAFSVQIWCIDRGGPVFVAVYQPVQTIAVAIMASIILGEQFYLGGIFG 325

Query: 1129 AVLIVTGLYAVLWGKGRE 1182
            A+LI+ GLY VLWGK  E
Sbjct: 326  AILIIIGLYLVLWGKSEE 343

>O31448:YBFH_BACSU Uncharacterized transporter ybhF - Bacillus subtilis|
          Length = 306

 Score = 37.7 bits (86), Expect = 0.14
 Identities = 62/272 (22%), Positives = 102/272 (37%), Gaps = 4/272 (1%)
 Frame = +1

Query: 244  KLAVSDGMDMRVLVAYRFLFASAVLAPIAYFVERKKRTKVTWRVLLLSFVCGLCGGSLAQ 423
            K+ ++D   M +L  YRFL     L      V         WR  LL    GL G +L  
Sbjct: 28   KVLLADFSPMEILF-YRFLMGFIALI----LVRPNMIPFRNWRQELLFAGAGLFGVTLYF 82

Query: 424  NLYISGMKLTSATFASAMTNLIPAITFVLA-VLFRYERLAIRTLAGQAKVTGTMLGVGGA 600
             L    +  T A+    + ++IP IT VLA  L   E+L +  L       G +  + G 
Sbjct: 83   LLENIALTYTYASNVGMIVSIIPMITAVLAHFLLEGEKLRLTFL------IGFISALIGL 136

Query: 601  MLLTFHKGAQVTLWPPTHINLAAQLAARHQHDDHNHASSAVHPDSGNRAMGSLLCTGSCF 780
            +L+TF+    + L P                                  +G ++  G+  
Sbjct: 137  LLITFNGNVVLRLNP----------------------------------LGDIMAAGAAL 162

Query: 781  FYALWLILQARLSREYPFH---YSTTALMRAMSALQSAAFALCFDRDLLQWRLSSGVRLL 951
             +  + I   +LS  Y +H    +    +  +  +  A F   F  DL   R SS   +L
Sbjct: 163  VFGGYSIFMKKLS-AYEYHIIELTQRVFLYGLLFMVPALFLFDFHFDLS--RFSSASNIL 219

Query: 952  AVLYTGVVASGVMLVVLSWCVKRRGPLFASVF 1047
             +L+ G+ AS +     ++ V   G + +S +
Sbjct: 220  NMLFLGIGASALCFATWNYSVGVLGAVKSSAY 251

>Q04621:PHI1_MYTED Sperm-specific protein Phi-1 - Mytilus edulis (Blue mussel)|
          Length = 92

 Score = 33.1 bits (74), Expect = 3.6
 Identities = 24/66 (36%), Positives = 27/66 (40%)
 Frame = +2

Query: 1151 SMPCSGGKAARRHRTSQPRPATSCRTSTSSCIVMTPLPRRRSSSNNKTARSRRRSGDHLS 1330
            S   S GKAA+R R+  PR       S S         RRRS S  KTA  RR+      
Sbjct: 21   SASASPGKAAKRARSKTPRRGKKRARSPSK------KARRRSRSTKKTAAKRRKRSSSPK 74

Query: 1331 KHGGRG 1348
            K    G
Sbjct: 75   KRRSAG 80

>P38943:YCAY_CLOKL Uncharacterized transporter in cat1 5'region - Clostridium kluyveri|
          Length = 311

 Score = 32.3 bits (72), Expect = 6.1
 Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
 Frame = +1

Query: 247 LAVSDGMDMRVLVAYRFLFASAVLAPIAYFVERKKRTKVTWRVLLLSFVCGLCGGSLAQN 426
           LA    MD   ++   FL  + +L P+A    + K+ K+T   L    +CG+   S++ +
Sbjct: 25  LAQKGAMDPFQVMMIVFLIGAIILLPMAVKDIKVKKLKLTGNDLGYLALCGILAVSISMS 84

Query: 427 LYISGMKLTSATFASAM--TNLIPAITFVLAVL 519
           +    +  T A+ A+ +  TN +  I F   +L
Sbjct: 85  MLQFAVTYTKASTAAVLFCTNAVFTIPFAYFIL 117



 Score = 32.0 bits (71), Expect = 7.9
 Identities = 22/88 (25%), Positives = 39/88 (44%)
 Frame = +1

Query: 295 FLFASAVLAPIAYFVERKKRTKVTWRVLLLSFVCGLCGGSLAQNLYISGMKLTSATFASA 474
           F F    L  +     R   + +T   +L+    G+   ++    Y+  +K TSA  AS 
Sbjct: 192 FFFGVIALLILLVVTGRPIFSGITLNNILVLLYMGIFIKAVGYICYLGAIKETSAVTAST 251

Query: 475 MTNLIPAITFVLAVLFRYERLAIRTLAG 558
           +  + PA+  VLA+L   E + +  + G
Sbjct: 252 VFLIKPALATVLAILILGESIEVNVVIG 279

>P36787:VE2_HPV25 Regulatory protein E2 - Human papillomavirus type 25|
          Length = 502

 Score = 32.3 bits (72), Expect = 6.1
 Identities = 21/60 (35%), Positives = 28/60 (46%)
 Frame = +2

Query: 1172 KAARRHRTSQPRPATSCRTSTSSCIVMTPLPRRRSSSNNKTARSRRRSGDHLSKHGGRGP 1351
            +A  R R S+ +  +  R+ + S I      R RS S +   RSR RS    S   GRGP
Sbjct: 259  QAQARQRRSRSKSRSRSRSQSRSRIRSRSRSRSRSESQSSKRRSRSRSRRKTSATRGRGP 318

>P60949:RBSU_LACJO Putative ribose uptake protein rbsU - Lactobacillus johnsonii|
          Length = 296

 Score = 32.0 bits (71), Expect = 7.9
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = -3

Query: 194 ATGFIPSITPIVSSTLSATWFLH 126
           ATGFI S T +V +TL+  WFLH
Sbjct: 246 ATGFILSQTSVVLATLTGIWFLH 268

>P31365:P3F2A_XENLA POU domain, class 3, transcription factor 2-A - Xenopus laevis|
            (African clawed frog)
          Length = 382

 Score = 32.0 bits (71), Expect = 7.9
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -2

Query: 1161 HGIEACHDENGAEHAAEVQLLAEQQRAEHSDHHQHHGVED 1042
            HG+   HD++  +H  +    A+QQ ++    HQ H  ED
Sbjct: 163  HGLRDSHDDHHGDHGHQQVSQAQQQHSQLQGGHQDHSDED 202

>Q7RX84:CWC22_NEUCR Pre-mRNA-splicing factor cwc-22 - Neurospora crassa|
          Length = 1010

 Score = 32.0 bits (71), Expect = 7.9
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 14/75 (18%)
 Frame = +2

Query: 1157 PCSGGKAAR---RHRTSQPRPATSCRTSTSSCIVMTPLP------RRRSSSNNK-----T 1294
            P  GG+  R   R RT  P P     T +   +  +P P      RRRS S+++     +
Sbjct: 933  PARGGRRNRSYSRSRTRSPPPLADAATGSRRVVSRSPSPVVGNNKRRRSYSSSRSRSRSS 992

Query: 1295 ARSRRRSGDHLSKHG 1339
            +RSR RS   ++K G
Sbjct: 993  SRSRYRSRSPVAKRG 1007


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 192,767,470
Number of extensions: 3492243
Number of successful extensions: 11597
Number of sequences better than 10.0: 8
Number of HSP's gapped: 11479
Number of HSP's successfully gapped: 9
Length of query: 554
Length of database: 100,686,439
Length adjustment: 118
Effective length of query: 436
Effective length of database: 68,319,629
Effective search space: 29787358244
Effective search space used: 29787358244
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)