ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf96d09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK067998:Os10g0569200 | 203 | 9e-53 | 2 | AK102135:Os04g0543200 | 38 | 0.006 | 3 | AK101961:Os04g0543200 | 38 | 0.006 | 4 | AK110919:Os09g0531100 | 32 | 0.45 | 5 | AK120426:Os05g0427300 | 32 | 0.59 | 6 | AK104745:Os05g0427300 | 32 | 0.59 | 7 | AK099731:Os05g0427300 | 32 | 0.59 | 8 | AK073321:Os05g0427300 | 32 | 0.59 | 9 | AK061869:Os05g0427300 | 32 | 0.59 | 10 | AK060130:Os05g0427300 | 32 | 0.59 | 11 | AK072828:Os12g0565800 | 30 | 1.7 | 12 | AK070172:Os10g0534500 | 30 | 2.2 | 13 | AK121881:Os01g0680200 | 29 | 2.9 | 14 | AK121007:Os10g0115600 | 29 | 2.9 | 15 | AK100686:Os10g0115600 | 29 | 2.9 | 16 | AK059504:Os10g0115600 | 29 | 2.9 | 17 | Os03g0374500:Os03g0374500 | 29 | 3.8 | 18 | Os05g0210500:Os05g0210500 | 28 | 5.0 | 19 | Os07g0419500:Os07g0419500 | 28 | 6.5 | 20 | Os03g0262300:Os03g0262300 | 28 | 8.5 |
|---|
>AK067998:Os10g0569200 | Length = 719 Score = 203 bits (517), Expect = 9e-53 Identities = 96/121 (79%), Positives = 109/121 (90%) Frame = +2 Query: 125 MALAISMEAIDARARELGIDLDSVDLDSITLPPGEDFDILSDDEDLLQNEDIPELEMGFA 304 MAL ISME I+ARARELG+DL +VDLDS+TLP GEDF ILSDDEDLL+ +D ELEMGFA Sbjct: 1 MALEISMEGIEARARELGVDLSTVDLDSVTLPAGEDFGILSDDEDLLRIDDPMELEMGFA 60 Query: 305 NIIVVDNLPVVPPEKYEKLENVLRKIYGQLGVIKEGGLWMPTDPKTKKTLGYCFIEYNTP 484 N++VVDNLPVVPPEK+EKLENV+RKIY Q+G IKEGGLWMP +P+TKKT GYCFIEYNTP Sbjct: 61 NVVVVDNLPVVPPEKFEKLENVIRKIYSQIGAIKEGGLWMPVNPETKKTYGYCFIEYNTP 120 Query: 485 Q 487 Q Sbjct: 121 Q 121
>AK102135:Os04g0543200 | Length = 774 Score = 38.1 bits (87), Expect = 0.006 Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 31/135 (22%) Frame = +2 Query: 170 ELGIDLDSVDLDSITLPPGEDFDILSDDEDLLQNE-DIPELEM---------GFANIIVV 319 E +D D DL+ + +++ ED+++ E D+ + E+ G+ N Sbjct: 108 EAAVDYDEKDLEQYEEQYEDGDEVVEYTEDVIEEETDMVDEELDGGDDGEGEGYENAEEE 167 Query: 320 DNLPVVPPEKYEKL---------------------ENVLRKIYGQLGVIKEGGLWMPTDP 436 N+ V E +E + E+ LRK++G++G I E L M +P Sbjct: 168 HNVDVEDEEHHEMVKEHRKRKEFEVFVGGLDKDATESDLRKVFGEVGEITEVRLMM--NP 225 Query: 437 KTKKTLGYCFIEYNT 481 TKK G+ F+ Y T Sbjct: 226 VTKKNKGFAFLRYAT 240
>AK101961:Os04g0543200 | Length = 774 Score = 38.1 bits (87), Expect = 0.006 Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 31/135 (22%) Frame = +2 Query: 170 ELGIDLDSVDLDSITLPPGEDFDILSDDEDLLQNE-DIPELEM---------GFANIIVV 319 E +D D DL+ + +++ ED+++ E D+ + E+ G+ N Sbjct: 108 EAAVDYDEKDLEQYEEQYEDGDEVVEYTEDVIEEETDMVDEELDGGDDGEGEGYENAEEE 167 Query: 320 DNLPVVPPEKYEKL---------------------ENVLRKIYGQLGVIKEGGLWMPTDP 436 N+ V E +E + E+ LRK++G++G I E L M +P Sbjct: 168 HNVDVEDEEHHEMVKEHRKRKEFEVFVGGLDKDATESDLRKVFGEVGEITEVRLMM--NP 225 Query: 437 KTKKTLGYCFIEYNT 481 TKK G+ F+ Y T Sbjct: 226 VTKKNKGFAFLRYAT 240
>AK110919:Os09g0531100 | Length = 329 Score = 32.0 bits (71), Expect = 0.45 Identities = 21/73 (28%), Positives = 32/73 (43%) Frame = +2 Query: 236 DILSDDEDLLQNEDIPELEMGFANIIVVDNLPVVPPEKYEKLENVLRKIYGQLGVIKEGG 415 D+ D+D E++ E M +VD L EK E+ +VL+ I + E Sbjct: 111 DLCKSDDDKKDYEELAENVMN-----IVDRLVHKTDEKIEQSTDVLKAIISPVMHEGENA 165 Query: 416 LWMPTDPKTKKTL 454 W P DP+ K + Sbjct: 166 TWPPRDPEALKLM 178
>AK120426:Os05g0427300 | Length = 187 Score = 31.6 bits (70), Expect = 0.59 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = +2 Query: 362 ENVLRKIYGQLGVIKEGGLWMPTDPKTKKTLGYCFIEYNTPQV 490 E VL +I Q+G + + L +P D +T ++ GY F EY T ++ Sbjct: 20 ERVLYEILIQVGRVVD--LHIPRDKETNRSKGYAFAEYETEEI 60
>AK104745:Os05g0427300 | Length = 187 Score = 31.6 bits (70), Expect = 0.59 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = +2 Query: 362 ENVLRKIYGQLGVIKEGGLWMPTDPKTKKTLGYCFIEYNTPQV 490 E VL +I Q+G + + L +P D +T ++ GY F EY T ++ Sbjct: 20 ERVLYEILIQVGRVVD--LHIPRDKETNRSKGYAFAEYETEEI 60
>AK099731:Os05g0427300 | Length = 161 Score = 31.6 bits (70), Expect = 0.59 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = +2 Query: 362 ENVLRKIYGQLGVIKEGGLWMPTDPKTKKTLGYCFIEYNTPQV 490 E VL +I Q+G + + L +P D +T ++ GY F EY T ++ Sbjct: 20 ERVLYEILIQVGRVVD--LHIPRDKETNRSKGYAFAEYETEEI 60
>AK073321:Os05g0427300 | Length = 187 Score = 31.6 bits (70), Expect = 0.59 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = +2 Query: 362 ENVLRKIYGQLGVIKEGGLWMPTDPKTKKTLGYCFIEYNTPQV 490 E VL +I Q+G + + L +P D +T ++ GY F EY T ++ Sbjct: 20 ERVLYEILIQVGRVVD--LHIPRDKETNRSKGYAFAEYETEEI 60
>AK061869:Os05g0427300 | Length = 187 Score = 31.6 bits (70), Expect = 0.59 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = +2 Query: 362 ENVLRKIYGQLGVIKEGGLWMPTDPKTKKTLGYCFIEYNTPQV 490 E VL +I Q+G + + L +P D +T ++ GY F EY T ++ Sbjct: 20 ERVLYEILIQVGRVVD--LHIPRDKETNRSKGYAFAEYETEEI 60
>AK060130:Os05g0427300 | Length = 187 Score = 31.6 bits (70), Expect = 0.59 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = +2 Query: 362 ENVLRKIYGQLGVIKEGGLWMPTDPKTKKTLGYCFIEYNTPQV 490 E VL +I Q+G + + L +P D +T ++ GY F EY T ++ Sbjct: 20 ERVLYEILIQVGRVVD--LHIPRDKETNRSKGYAFAEYETEEI 60
>AK072828:Os12g0565800 | Length = 672 Score = 30.0 bits (66), Expect = 1.7 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 3/79 (3%) Frame = +2 Query: 218 PPGEDFDILSDDEDLLQNEDI---PELEMGFANIIVVDNLPVVPPEKYEKLENVLRKIYG 388 P ++ I +DD ++ +E I P E + + + P ++ L+N R I Sbjct: 64 PIEDNVGINTDDNNVSDHEPIFNSPTTESTRVDDEPIFTFDMYDPVNWDNLDNKARDILV 123 Query: 389 QLGVIKEGGLWMPTDPKTK 445 + G I+EG + P D T+ Sbjct: 124 EKGPIREGNIVFPLDVNTR 142
>AK070172:Os10g0534500 | Length = 924 Score = 29.6 bits (65), Expect = 2.2 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Frame = +2 Query: 362 ENVLRKIYGQLG-VIKEGGLWMPTDPKTKKTLGYCFIEYNTPQ 487 E+ + K++ G +I E LW PK + GY F++Y T + Sbjct: 882 ESDIIKMFSPFGKIIAEDFLWHTRGPKRGEPRGYAFVQYTTKE 924
>AK121881:Os01g0680200 | Length = 387 Score = 29.3 bits (64), Expect = 2.9 Identities = 17/50 (34%), Positives = 24/50 (48%) Frame = +3 Query: 402 SKKAGFGCLQTRRRRRPWATASLSIILRRFVASCQLHLFTYLHDGMRQWL 551 S A G RRRRR A+ + +L VAS L + + H G +W+ Sbjct: 19 SSVAANGARAARRRRRLLLFANYAALLGGSVASSLLSRYYFAHGGHNRWV 68
>AK121007:Os10g0115600 | Length = 463 Score = 29.3 bits (64), Expect = 2.9 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = +2 Query: 350 YEKLENVLRKIYGQLGVIKEGGLWMPTDPKTKKTLGYCFIEY 475 YE E+ +++ + G IK + + TD +T K GY FIEY Sbjct: 148 YETSEHRVKREFEAYGPIKR--VRLVTDKETNKPRGYAFIEY 187
>AK100686:Os10g0115600 | Length = 463 Score = 29.3 bits (64), Expect = 2.9 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = +2 Query: 350 YEKLENVLRKIYGQLGVIKEGGLWMPTDPKTKKTLGYCFIEY 475 YE E+ +++ + G IK + + TD +T K GY FIEY Sbjct: 148 YETSEHRVKREFEAYGPIKR--VRLVTDKETNKPRGYAFIEY 187
>AK059504:Os10g0115600 | Length = 463 Score = 29.3 bits (64), Expect = 2.9 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = +2 Query: 350 YEKLENVLRKIYGQLGVIKEGGLWMPTDPKTKKTLGYCFIEY 475 YE E+ +++ + G IK + + TD +T K GY FIEY Sbjct: 148 YETSEHRVKREFEAYGPIKR--VRLVTDKETNKPRGYAFIEY 187
>Os03g0374500:Os03g0374500 | Length = 814 Score = 28.9 bits (63), Expect = 3.8 Identities = 13/39 (33%), Positives = 25/39 (64%) Frame = +2 Query: 371 LRKIYGQLGVIKEGGLWMPTDPKTKKTLGYCFIEYNTPQ 487 LR+ +G+ G +K+ +++P D T + G+ FI+Y P+ Sbjct: 53 LRRPFGKFGRVKD--IYLPRDYYTGEPRGFGFIQYYDPE 89
>Os05g0210500:Os05g0210500 | Length = 1226 Score = 28.5 bits (62), Expect = 5.0 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = -2 Query: 715 HLTAKKSQPL-SNTTNSTKKRGVPRTKVNQDTEFKRSRDDLSHGRNA 578 H + KK + L S +T++ P + QD E S+D+L HG N+ Sbjct: 1113 HRSGKKKRLLKSGFAANTQEHEEPLKNIGQDDETISSKDNLHHGLNS 1159
>Os07g0419500:Os07g0419500 | Length = 719 Score = 28.1 bits (61), Expect = 6.5 Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 8/95 (8%) Frame = +2 Query: 257 DLLQNEDIPE-----LEMGFANIIV-VDNLPVVPPEKYEKLENVLRKIYGQLGVIKE--G 412 DL N PE LE G I + +LP+ P+K ++ +I GQ G+I + G Sbjct: 376 DLASNYKPPEPLLKWLESGEKPIYIGFGSLPIPEPDKLTRIIVEALEITGQRGIINKGWG 435 Query: 413 GLWMPTDPKTKKTLGYCFIEYNTPQVCCFLSVASV 517 GL +PK + ++ N P FL +V Sbjct: 436 GLGNLEEPKE-----FVYVIDNIPHDWLFLQCKAV 465
>Os03g0262300:Os03g0262300 | Length = 1300 Score = 27.7 bits (60), Expect = 8.5 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%) Frame = +2 Query: 191 SVDLDSITLPPGEDFDILSDDEDLLQNEDIPELEMGF---ANIIVVDN 325 SVD+D +T P + ++D+ D L NED P+L + ANI +N Sbjct: 169 SVDIDLVTGP--SEASPVNDNVDALDNEDKPQLIVDLRSEANIAAEEN 214 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 18,744,093 Number of extensions: 412909 Number of successful extensions: 1327 Number of sequences better than 10.0: 20 Number of HSP's gapped: 1327 Number of HSP's successfully gapped: 20 Length of query: 246 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 148 Effective length of database: 11,475,837 Effective search space: 1698423876 Effective search space used: 1698423876 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
