Clone Name | FLbaf96d09 |
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Clone Library Name | barley_pub |
>ref|NM_001071978.1| Oryza sativa (japonica cultivar-group) Os10g0569200 (Os10g0569200) mRNA, complete cds Length = 2574 Score = 222 bits (112), Expect = 1e-54 Identities = 298/360 (82%) Strand = Plus / Plus Query: 121 gaagatggcgctagcaatctcgatggaagccatagatgcgcgcgcgcgggagctggggat 180 |||||||||||||| |||||| ||||||| ||| || ||||| ||||||||||| ||| | Sbjct: 189 gaagatggcgctagaaatctccatggaaggcatcgaagcgcgggcgcgggagcttggggt 248 Query: 181 cgacctcgactccgtcgacctcgactccatcaccctccctcccggcgaggacttcgacat 240 ||||||| | ||||||| ||||||||| |||||||||| ||||||||||||||| ||| Sbjct: 249 cgacctctccaccgtcgatctcgactccgtcaccctccccgccggcgaggacttcggcat 308 Query: 241 cctcagtgacgacgaggatttgcttcagaatgaagacattccagagcttgagatgggttt 300 |||||||||||| |||||||| |||| || ||| ||| | |||||||| ||||| || Sbjct: 309 cctcagtgacgatgaggatttacttcggattgatgaccctatggagcttgaaatggggtt 368 Query: 301 tgcaaacattattgtggtggacaatctgccggttgttcccccggagaagtacgagaagct 360 ||| ||| || |||| |||||||| ||||| |||||||| || ||||||| |||||| | Sbjct: 369 tgctaacgttgttgtcgtggacaacctgcccgttgttccaccagagaagtttgagaagtt 428 Query: 361 ggagaatgttttgcgcaagatatatggtcaacttggtgtgatcaaagaaggcgggctttg 420 |||||| || | |||||||| || ||||| |||||| |||||||||||| || ||||| Sbjct: 429 ggagaacgtcatacgcaagatctacagtcaaattggtgcgatcaaagaaggtggtctttg 488 Query: 421 gatgcctacagacccgaagacgaagaagaccctgggctactgcttcattgagtataatac 480 ||||||| | |||| |||| |||||||| || ||||||||||| ||||||||||| Sbjct: 489 gatgcctgtaaacccagagacaaagaagacatacggttactgcttcatcgagtataatac 548
>dbj|AK067998.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127N17, full insert sequence Length = 2575 Score = 222 bits (112), Expect = 1e-54 Identities = 298/360 (82%) Strand = Plus / Plus Query: 121 gaagatggcgctagcaatctcgatggaagccatagatgcgcgcgcgcgggagctggggat 180 |||||||||||||| |||||| ||||||| ||| || ||||| ||||||||||| ||| | Sbjct: 190 gaagatggcgctagaaatctccatggaaggcatcgaagcgcgggcgcgggagcttggggt 249 Query: 181 cgacctcgactccgtcgacctcgactccatcaccctccctcccggcgaggacttcgacat 240 ||||||| | ||||||| ||||||||| |||||||||| ||||||||||||||| ||| Sbjct: 250 cgacctctccaccgtcgatctcgactccgtcaccctccccgccggcgaggacttcggcat 309 Query: 241 cctcagtgacgacgaggatttgcttcagaatgaagacattccagagcttgagatgggttt 300 |||||||||||| |||||||| |||| || ||| ||| | |||||||| ||||| || Sbjct: 310 cctcagtgacgatgaggatttacttcggattgatgaccctatggagcttgaaatggggtt 369 Query: 301 tgcaaacattattgtggtggacaatctgccggttgttcccccggagaagtacgagaagct 360 ||| ||| || |||| |||||||| ||||| |||||||| || ||||||| |||||| | Sbjct: 370 tgctaacgttgttgtcgtggacaacctgcccgttgttccaccagagaagtttgagaagtt 429 Query: 361 ggagaatgttttgcgcaagatatatggtcaacttggtgtgatcaaagaaggcgggctttg 420 |||||| || | |||||||| || ||||| |||||| |||||||||||| || ||||| Sbjct: 430 ggagaacgtcatacgcaagatctacagtcaaattggtgcgatcaaagaaggtggtctttg 489 Query: 421 gatgcctacagacccgaagacgaagaagaccctgggctactgcttcattgagtataatac 480 ||||||| | |||| |||| |||||||| || ||||||||||| ||||||||||| Sbjct: 490 gatgcctgtaaacccagagacaaagaagacatacggttactgcttcatcgagtataatac 549
>gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 genomic sequence, complete sequence Length = 187707 Score = 123 bits (62), Expect = 9e-25 Identities = 110/126 (87%) Strand = Plus / Minus Query: 121 gaagatggcgctagcaatctcgatggaagccatagatgcgcgcgcgcgggagctggggat 180 |||||||||||||| |||||| ||||||| ||| || ||||| ||||||||||| ||| | Sbjct: 52528 gaagatggcgctagaaatctccatggaaggcatcgaagcgcgggcgcgggagcttggggt 52469 Query: 181 cgacctcgactccgtcgacctcgactccatcaccctccctcccggcgaggacttcgacat 240 ||||||| | ||||||| ||||||||| |||||||||| ||||||||||||||| ||| Sbjct: 52468 cgacctctccaccgtcgatctcgactccgtcaccctccccgccggcgaggacttcggcat 52409 Query: 241 cctcag 246 |||||| Sbjct: 52408 cctcag 52403 Score = 109 bits (55), Expect = 1e-20 Identities = 199/247 (80%) Strand = Plus / Minus Query: 243 tcagtgacgacgaggatttgcttcagaatgaagacattccagagcttgagatgggttttg 302 |||||||||| |||||||| |||| || ||| ||| | |||||||| ||||| |||| Sbjct: 51894 tcagtgacgatgaggatttacttcggattgatgaccctatggagcttgaaatggggtttg 51835 Query: 303 caaacattattgtggtggacaatctgccggttgttcccccggagaagtacgagaagctgg 362 | ||| || |||| |||||||| ||||| |||||||| || ||||||| |||||| ||| Sbjct: 51834 ctaacgttgttgtcgtggacaacctgcccgttgttccaccagagaagtttgagaagttgg 51775 Query: 363 agaatgttttgcgcaagatatatggtcaacttggtgtgatcaaagaaggcgggctttgga 422 |||| || | |||||||| || ||||| |||||| |||||||||||| || ||||||| Sbjct: 51774 agaacgtcatacgcaagatctacagtcaaattggtgcgatcaaagaaggtggtctttgga 51715 Query: 423 tgcctacagacccgaagacgaagaagaccctgggctactgcttcattgagtataatactc 482 ||||| | |||| |||| |||||||| || ||||||||||| ||||||||||| | Sbjct: 51714 tgcctgtaaacccagagacaaagaagacatacggttactgcttcatcgagtataataccc 51655 Query: 483 cgcaggt 489 | ||||| Sbjct: 51654 cacaggt 51648
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 123 bits (62), Expect = 9e-25 Identities = 110/126 (87%) Strand = Plus / Minus Query: 121 gaagatggcgctagcaatctcgatggaagccatagatgcgcgcgcgcgggagctggggat 180 |||||||||||||| |||||| ||||||| ||| || ||||| ||||||||||| ||| | Sbjct: 22047984 gaagatggcgctagaaatctccatggaaggcatcgaagcgcgggcgcgggagcttggggt 22047925 Query: 181 cgacctcgactccgtcgacctcgactccatcaccctccctcccggcgaggacttcgacat 240 ||||||| | ||||||| ||||||||| |||||||||| ||||||||||||||| ||| Sbjct: 22047924 cgacctctccaccgtcgatctcgactccgtcaccctccccgccggcgaggacttcggcat 22047865 Query: 241 cctcag 246 |||||| Sbjct: 22047864 cctcag 22047859 Score = 109 bits (55), Expect = 1e-20 Identities = 199/247 (80%) Strand = Plus / Minus Query: 243 tcagtgacgacgaggatttgcttcagaatgaagacattccagagcttgagatgggttttg 302 |||||||||| |||||||| |||| || ||| ||| | |||||||| ||||| |||| Sbjct: 22047350 tcagtgacgatgaggatttacttcggattgatgaccctatggagcttgaaatggggtttg 22047291 Query: 303 caaacattattgtggtggacaatctgccggttgttcccccggagaagtacgagaagctgg 362 | ||| || |||| |||||||| ||||| |||||||| || ||||||| |||||| ||| Sbjct: 22047290 ctaacgttgttgtcgtggacaacctgcccgttgttccaccagagaagtttgagaagttgg 22047231 Query: 363 agaatgttttgcgcaagatatatggtcaacttggtgtgatcaaagaaggcgggctttgga 422 |||| || | |||||||| || ||||| |||||| |||||||||||| || ||||||| Sbjct: 22047230 agaacgtcatacgcaagatctacagtcaaattggtgcgatcaaagaaggtggtctttgga 22047171 Query: 423 tgcctacagacccgaagacgaagaagaccctgggctactgcttcattgagtataatactc 482 ||||| | |||| |||| |||||||| || ||||||||||| ||||||||||| | Sbjct: 22047170 tgcctgtaaacccagagacaaagaagacatacggttactgcttcatcgagtataataccc 22047111 Query: 483 cgcaggt 489 | ||||| Sbjct: 22047110 cacaggt 22047104
>gb|AY106070.1| Zea mays PCO091621 mRNA sequence Length = 657 Score = 61.9 bits (31), Expect = 3e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 307 cattattgtggtggacaatctgccggttgttcccccggagaagtacgagaagctggagaa 366 ||||||||| |||||||||||||| |||||||| || || |||| |||||||| ||||| Sbjct: 12 cattattgtcgtggacaatctgccagttgttcctccagaaaagtttgagaagcttgagaa 71 Query: 367 tgt 369 ||| Sbjct: 72 tgt 74
>dbj|AK242651.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090026B08, full insert sequence Length = 1256 Score = 48.1 bits (24), Expect = 0.045 Identities = 24/24 (100%) Strand = Plus / Plus Query: 343 ggagaagtacgagaagctggagaa 366 |||||||||||||||||||||||| Sbjct: 102 ggagaagtacgagaagctggagaa 125
>ref|NM_001051619.1| Oryza sativa (japonica cultivar-group) Os01g0897000 (Os01g0897000) mRNA, complete cds Length = 822 Score = 48.1 bits (24), Expect = 0.045 Identities = 24/24 (100%) Strand = Plus / Plus Query: 343 ggagaagtacgagaagctggagaa 366 |||||||||||||||||||||||| Sbjct: 3 ggagaagtacgagaagctggagaa 26
>dbj|AB239918.1| Oryza sativa (japonica cultivar-group) Os;CDKB1;1 mRNA for cyclin-dependent kinase, complete cds Length = 912 Score = 48.1 bits (24), Expect = 0.045 Identities = 24/24 (100%) Strand = Plus / Plus Query: 343 ggagaagtacgagaagctggagaa 366 |||||||||||||||||||||||| Sbjct: 3 ggagaagtacgagaagctggagaa 26
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 48.1 bits (24), Expect = 0.045 Identities = 24/24 (100%) Strand = Plus / Minus Query: 343 ggagaagtacgagaagctggagaa 366 |||||||||||||||||||||||| Sbjct: 38977335 ggagaagtacgagaagctggagaa 38977312
>dbj|AB205133.1| Scutellaria baicalensis cdkb mRNA for cyclin-dependent kinase B, complete cds Length = 2427 Score = 48.1 bits (24), Expect = 0.045 Identities = 24/24 (100%) Strand = Plus / Plus Query: 343 ggagaagtacgagaagctggagaa 366 |||||||||||||||||||||||| Sbjct: 1244 ggagaagtacgagaagctggagaa 1267
>emb|Y11996.1|NTPRT1 N.tabacum mRNA for PRT1 protein Length = 2523 Score = 48.1 bits (24), Expect = 0.045 Identities = 36/40 (90%) Strand = Plus / Plus Query: 449 accctgggctactgcttcattgagtataatactccgcagg 488 ||||| || ||||||||||| |||||||||||||| |||| Sbjct: 439 accctagggtactgcttcatcgagtataatactcctcagg 478
>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0674H09 Length = 142955 Score = 48.1 bits (24), Expect = 0.045 Identities = 24/24 (100%) Strand = Plus / Minus Query: 343 ggagaagtacgagaagctggagaa 366 |||||||||||||||||||||||| Sbjct: 50968 ggagaagtacgagaagctggagaa 50945
>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696G06 Length = 142571 Score = 48.1 bits (24), Expect = 0.045 Identities = 24/24 (100%) Strand = Plus / Minus Query: 343 ggagaagtacgagaagctggagaa 366 |||||||||||||||||||||||| Sbjct: 142121 ggagaagtacgagaagctggagaa 142098
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 46.1 bits (23), Expect = 0.18 Identities = 23/23 (100%) Strand = Plus / Plus Query: 221 cccggcgaggacttcgacatcct 243 ||||||||||||||||||||||| Sbjct: 1170720 cccggcgaggacttcgacatcct 1170742
>emb|AM260480.1| Ralstonia eutropha H16 chromosome 2 Length = 2912490 Score = 44.1 bits (22), Expect = 0.70 Identities = 22/22 (100%) Strand = Plus / Plus Query: 224 ggcgaggacttcgacatcctca 245 |||||||||||||||||||||| Sbjct: 1043860 ggcgaggacttcgacatcctca 1043881
>ref|NM_001079308.1| Xenopus tropicalis cyclin-dependent kinase 5 (MGC145955), mRNA gb|BC118780.1| Xenopus tropicalis cyclin-dependent kinase 5, mRNA (cDNA clone MGC:145955 IMAGE:7666061), complete cds Length = 1448 Score = 44.1 bits (22), Expect = 0.70 Identities = 22/22 (100%) Strand = Plus / Plus Query: 345 agaagtacgagaagctggagaa 366 |||||||||||||||||||||| Sbjct: 35 agaagtacgagaagctggagaa 56
>emb|CR353821.1| Gallus gallus finished cDNA, clone ChEST151e14 Length = 887 Score = 44.1 bits (22), Expect = 0.70 Identities = 22/22 (100%) Strand = Plus / Plus Query: 345 agaagtacgagaagctggagaa 366 |||||||||||||||||||||| Sbjct: 39 agaagtacgagaagctggagaa 60
>ref|XM_508589.2| PREDICTED: Pan troglodytes beta adrenergic receptor kinase 1 (ADRBK1), mRNA Length = 3469 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 agaagtacgagaagctggaga 365 ||||||||||||||||||||| Sbjct: 219 agaagtacgagaagctggaga 239
>gb|DQ894328.1| Homo sapiens clone FLH169746.01L; RZPDo839F0995D ADRBK1 mRNA, partial sequence Length = 2070 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 agaagtacgagaagctggaga 365 ||||||||||||||||||||| Sbjct: 269 agaagtacgagaagctggaga 289
>gb|DQ891148.1| Synthetic construct Homo sapiens clone FLH169750.01X; RZPDo839F0996D ADRBK1 mRNA, complete sequence Length = 2070 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 agaagtacgagaagctggaga 365 ||||||||||||||||||||| Sbjct: 269 agaagtacgagaagctggaga 289
>gb|AF395898.2| Hibiscus latent Singapore virus, complete genome Length = 6474 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 564 ttttgcaatttctgtgcattc 584 ||||||||||||||||||||| Sbjct: 688 ttttgcaatttctgtgcattc 708
>gb|BC037963.1| Homo sapiens adrenergic, beta, receptor kinase 1, mRNA (cDNA clone MGC:46122 IMAGE:5585846), complete cds Length = 3440 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 agaagtacgagaagctggaga 365 ||||||||||||||||||||| Sbjct: 514 agaagtacgagaagctggaga 534
>gb|AC144485.2| Gasterosteus aculeatus clone CH213-101E8, complete sequence Length = 203829 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 559 tgtccttttgcaatttctgtg 579 ||||||||||||||||||||| Sbjct: 44697 tgtccttttgcaatttctgtg 44717
>gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBb0074K09, complete sequence Length = 135363 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 aatcctaaaccctagctcaac 32 ||||||||||||||||||||| Sbjct: 108581 aatcctaaaccctagctcaac 108601
>gb|U08437.1|HSNBARKS3 Homo sapiens beta-adrenergic receptor kinase (ADR) gene, exons 3, 4, 5, and 6 Length = 896 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 agaagtacgagaagctggaga 365 ||||||||||||||||||||| Sbjct: 405 agaagtacgagaagctggaga 425
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 aatcctaaaccctagctcaac 32 ||||||||||||||||||||| Sbjct: 6052498 aatcctaaaccctagctcaac 6052518
>dbj|AB209588.1| Homo sapiens mRNA for beta adrenergic receptor kinase 1 variant protein Length = 4493 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 agaagtacgagaagctggaga 365 ||||||||||||||||||||| Sbjct: 891 agaagtacgagaagctggaga 911
>gb|AC093159.3| Homo sapiens BAC clone RP11-642D6 from 2, complete sequence Length = 186561 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 cccccaaatcctaaaccctag 26 ||||||||||||||||||||| Sbjct: 168029 cccccaaatcctaaaccctag 168049
>emb|CR616194.1| full-length cDNA clone CS0DC009YI17 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1458 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 agaagtacgagaagctggaga 365 ||||||||||||||||||||| Sbjct: 488 agaagtacgagaagctggaga 508
>gb|AY888073.1| Synthetic construct Homo sapiens clone FLH159297.01L adrenergic beta receptor kinase 1 (ADRBK1) mRNA, partial cds Length = 2070 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 agaagtacgagaagctggaga 365 ||||||||||||||||||||| Sbjct: 269 agaagtacgagaagctggaga 289
>dbj|AP001885.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-157K17, complete sequence Length = 173052 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 agaagtacgagaagctggaga 365 ||||||||||||||||||||| Sbjct: 132970 agaagtacgagaagctggaga 132990
>gb|BC090863.1| Homo sapiens adrenergic, beta, receptor kinase 1, mRNA (cDNA clone MGC:102807 IMAGE:6203199), complete cds Length = 3430 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 agaagtacgagaagctggaga 365 ||||||||||||||||||||| Sbjct: 503 agaagtacgagaagctggaga 523
>ref|NM_001619.2| Homo sapiens adrenergic, beta, receptor kinase 1 (ADRBK1), mRNA Length = 3603 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 agaagtacgagaagctggaga 365 ||||||||||||||||||||| Sbjct: 354 agaagtacgagaagctggaga 374
>emb|X61157.1|HSBARK H.sapiens mRNA for beta-adrenergic receptor kinase Length = 3136 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 agaagtacgagaagctggaga 365 ||||||||||||||||||||| Sbjct: 376 agaagtacgagaagctggaga 396
>gb|M80776.1|HUMBARK1A Human beta-adrenergic receptor kinase 1 mRNA, complete cds Length = 2100 Score = 42.1 bits (21), Expect = 2.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 agaagtacgagaagctggaga 365 ||||||||||||||||||||| Sbjct: 284 agaagtacgagaagctggaga 304 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 107,588,160 Number of extensions: 6087989 Number of successful extensions: 111026 Number of sequences better than 10.0: 35 Number of HSP's gapped: 111020 Number of HSP's successfully gapped: 37 Length of query: 740 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 718 Effective length of database: 18,508,616,841 Effective search space: 13289186891838 Effective search space used: 13289186891838 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)