ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf98f03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001062070.1| Oryza sativa (japonica cultivar-group) Os05g0410900 (Os05g0410900) mRNA, complete cds Length = 2208 Score = 1243 bits (627), Expect = 0.0 Identities = 1035/1171 (88%) Strand = Plus / Plus Query: 718 cccatgtggagcttcttcaacctgtacttcttcggcattgagctcgccaagctcgcggcg 777 |||| |||||||||||||||||| |||||||||||||| ||||||||||||||| | || Sbjct: 653 cccaagtggagcttcttcaacctctacttcttcggcatcgagctcgccaagctcaccgcc 712 Query: 778 gtcaccgtggtggtgtacatccaggagaacgtcggctgggggtgggggctcggcgtgccc 837 |||||||| | ||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 713 gtcaccgtcatcgtgtacatccaggagaacgtcgggtgggggtggggcctcggcgtgccc 772 Query: 838 accatcgccatgttctttgccgtgatcggcttcgtgtccgggtactcgctatatgtcaag 897 ||||||||||||||| |||||| ||| |||||||||||| |||||| | || |||||| Sbjct: 773 accatcgccatgttcgccgccgtggtcgccttcgtgtccggctactcgatgtacgtcaag 832 Query: 898 atgccgcccggcggcagcccgcttgtccgcctggcgcaggtcgtctctgctgccttcaag 957 ||||| |||| ||||||||| || ||||| ||||||||||||| | || ||||||||| Sbjct: 833 atgcctcccgccggcagccccctggtccggctggcgcaggtcgcagccgccgccttcaag 892 Query: 958 aagaggaaaactgtcctgccggacccggacctcctgtacgaggacaagaagctcgacgcc 1017 ||||||||| | ||| ||||||| || || ||| |||||||||||| |||||||||| Sbjct: 893 aagaggaaagccgtcatgccggagccaagccgcctctacgaggacaaggtgctcgacgcc 952 Query: 1018 ggcatctccaccaccggccgtcttctccacaccaaccagctaaagttctttgacaaggcg 1077 ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 953 ggcatctccaccaccggccgtcttctccacaccgatcagctaaagttctttgacaaggcg 1012 Query: 1078 gccatagtgacagagggcgacgtgctgccgtccggcgagccgaagctgtggcggttgtcg 1137 ||||| | || || ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1013 gccattatcacggacggcgacgtgctgccgtccggcgagccgaagctgtggcggctgtcg 1072 Query: 1138 acggtgcaccgggtggaagagatcaagtcgattgtccggatgctgcccatctgggcggcg 1197 ||||||||||| || || ||| |||||||||| |||| ||||||||||||||||||||| Sbjct: 1073 acggtgcaccgcgtcgaggagctcaagtcgatcctccgcatgctgcccatctgggcggcg 1132 Query: 1198 ggcatcctcatggtgaccgcgtcgtcacacaacagcagcttcgcgatccagcaggcgcgc 1257 |||||||| |||||||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 1133 ggcatcctgctggtgacctcggcgtcgcacaacagcagcttcgcgatccagcaggcgcgc 1192 Query: 1258 accatggaccgcgacatcgcgcggagcttcaagatcccgccggcttccatgctcatcttc 1317 |||||||||||||||||| ||| | |||||||||||||||||| ||||||||||||||| Sbjct: 1193 accatggaccgcgacatcacgccgcacttcaagatcccgccggcctccatgctcatcttc 1252 Query: 1318 accaacctctccatgcttgtcaccctcgccttctacgaccgggtgctcgtccgcgtgctt 1377 ||||||||| ||||||| |||||||||||||||||||||| || |||||||||||||| Sbjct: 1253 accaacctcgccatgctgctcaccctcgccttctacgaccgcgtcctcgtccgcgtgctc 1312 Query: 1378 cgccgcttcaccggccgccccaacggcatcacccacctccagcgcgccggcgtcggcatg 1437 ||||||||||| |||| ||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 1313 cgccgcttcacgggccacccaaacggcatcacccacctccagcgcgccggcgtgggcatg 1372 Query: 1438 accatcgccatgctggcgaacgtggctgcggcagccgtcgagactcggcggaagtcagtg 1497 ||||| |||||||| || |||| || || || | ||| |||| ||| || ||||| ||| Sbjct: 1373 accattgccatgctcgccaacgcggtggccgcggtcgtggagagtcgccgcaagtccgtg 1432 Query: 1498 gccgcagccagcggcatgctcgacgcgcccaaaggcaccacgttgcccatcagtgtcttc 1557 ||||| || ||||||||||||||||||||||| || | | || |||||||||| |||||| Sbjct: 1433 gccgcggcgagcggcatgctcgacgcgcccaagggtagctcgctgcccatcagcgtcttc 1492 Query: 1558 tggctggtgccgcagtacgccatccacggtatcgccgacgcattcatggacgtcggccgc 1617 ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 1493 tggctggtgccgcagtacgccatccacggcgtcgccgacgccttcatggacgtcggccgc 1552 Query: 1618 atggagtttttgtacgaccaggcgcccgagagcatgaggagcactgcggcggcgctctac 1677 |||||||| | |||||||||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1553 atggagttcctctacgaccaggcgccggagagcatgcggagcaccgcggcggcgctctac 1612 Query: 1678 tggctcaccatctcggcggggagctacctcggcacgctgctggtgaccatcgtgcacgag 1737 ||||||||||| ||| || |||||||||||||||||||| || |||||| | |||| Sbjct: 1613 tggctcaccatgtcgatcggcagctacctcggcacgctgctcgtcaccatcatccacgcc 1672 Query: 1738 aagacgcaggcgagcgggcagtggctacaggacaacctcaacagagggaagctggataac 1797 ||||||||| ||||||||||||||| ||||||||||||||| ||| |||||||| | | Sbjct: 1673 aagacgcagcggagcgggcagtggctgcaggacaacctcaaccgagccaagctggacagc 1732 Query: 1798 tactactggctcgtcgtcggactgcaggggctcaacctcatctactacttcatatgtgtc 1857 ||||||||||||||| |||| ||||||||||||||||||||||||||||| | || ||| Sbjct: 1733 tactactggctcgtcttcggcttgcaggggctcaacctcatctactacttcgtctgcgtc 1792 Query: 1858 aagtactacacttttaagccactggagacgg 1888 | ||||||||| || |||||| ||||||||| Sbjct: 1793 aggtactacaccttcaagccattggagacgg 1823 Score = 490 bits (247), Expect = e-134 Identities = 406/459 (88%) Strand = Plus / Plus Query: 216 gaagaaggcgaagcagggcggcttcaggaccatgcccttcatcctagcgaacgacttctg 275 ||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 157 gaagaagccgaagcagggaggcttcaggaccatgccgttcatcctagcgaacgacttctg 216 Query: 276 cgaccggctggcgacggtggggttcgggtcgaacctgatctcctacctcaccctccagct 335 ||||||||| |||| ||||||||| | || ||||||||| | ||||| ||||| ||||| Sbjct: 217 cgaccggctcgcgaatgtggggttcagctccaacctgatcacgtacctgaccctgcagct 276 Query: 336 gcacctgccgctggtcgaggcctctaacgtgctcacgaactaccacggcacgaccaacct 395 |||||| || || ||||| ||||| ||| ||| || |||| ||||||||| ||||||| Sbjct: 277 gcacctccccctcgtcgacgcctccaacacgctgaccaacttccacggcaccgccaacct 336 Query: 396 cacgccgctcgtcggcggcctcatcgctgactccttcgcgggccgcttctggaccatcac 455 ||| ||||||||||||||||||||||| ||||||||||| ||| | |||||||||||||| Sbjct: 337 caccccgctcgtcggcggcctcatcgccgactccttcgccggcaggttctggaccatcac 396 Query: 456 cgtcggctccatcatctaccagctcggcatggtctgcctcaccctctccgccgcgctccc 515 |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 397 gttcggctccgtcatctaccagctcggcatggtcttcctcaccctctccgccgcgctccc 456 Query: 516 ctcgctccgcccgccgccgtgccccaagcacgcggtcgagtgccagcgcgcatccaccta 575 |||||||||||||||||| ||| |||||||||| | ||| ||||||||||| || ||| Sbjct: 457 ctcgctccgcccgccgccctgcgccaagcacgccgccgactgccagcgcgcctcgtcctc 516 Query: 576 ccagatcgccatcctctacctgtcgctgctctgcacgtccatcggctccgggggcacgcg 635 |||||||||| | |||||| |||||||||| ||| ||||||||| |||| |||||||| Sbjct: 517 ccagatcgccgtgctctacgcctcgctgctcttcacctccatcggcaccggcggcacgcg 576 Query: 636 cccctgcaacatggcgttcggcgccgaccagctcgagct 674 |||||||| |||||||||||||||||||||||||||||| Sbjct: 577 cccctgcatcatggcgttcggcgccgaccagctcgagct 615
>dbj|AK119621.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-H03, full insert sequence Length = 2086 Score = 1243 bits (627), Expect = 0.0 Identities = 1035/1171 (88%) Strand = Plus / Plus Query: 718 cccatgtggagcttcttcaacctgtacttcttcggcattgagctcgccaagctcgcggcg 777 |||| |||||||||||||||||| |||||||||||||| ||||||||||||||| | || Sbjct: 653 cccaagtggagcttcttcaacctctacttcttcggcatcgagctcgccaagctcaccgcc 712 Query: 778 gtcaccgtggtggtgtacatccaggagaacgtcggctgggggtgggggctcggcgtgccc 837 |||||||| | ||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 713 gtcaccgtcatcgtgtacatccaggagaacgtcgggtgggggtggggcctcggcgtgccc 772 Query: 838 accatcgccatgttctttgccgtgatcggcttcgtgtccgggtactcgctatatgtcaag 897 ||||||||||||||| |||||| ||| |||||||||||| |||||| | || |||||| Sbjct: 773 accatcgccatgttcgccgccgtggtcgccttcgtgtccggctactcgatgtacgtcaag 832 Query: 898 atgccgcccggcggcagcccgcttgtccgcctggcgcaggtcgtctctgctgccttcaag 957 ||||| |||| ||||||||| || ||||| ||||||||||||| | || ||||||||| Sbjct: 833 atgcctcccgccggcagccccctggtccggctggcgcaggtcgcagccgccgccttcaag 892 Query: 958 aagaggaaaactgtcctgccggacccggacctcctgtacgaggacaagaagctcgacgcc 1017 ||||||||| | ||| ||||||| || || ||| |||||||||||| |||||||||| Sbjct: 893 aagaggaaagccgtcatgccggagccaagccgcctctacgaggacaaggtgctcgacgcc 952 Query: 1018 ggcatctccaccaccggccgtcttctccacaccaaccagctaaagttctttgacaaggcg 1077 ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 953 ggcatctccaccaccggccgtcttctccacaccgatcagctaaagttctttgacaaggcg 1012 Query: 1078 gccatagtgacagagggcgacgtgctgccgtccggcgagccgaagctgtggcggttgtcg 1137 ||||| | || || ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1013 gccattatcacggacggcgacgtgctgccgtccggcgagccgaagctgtggcggctgtcg 1072 Query: 1138 acggtgcaccgggtggaagagatcaagtcgattgtccggatgctgcccatctgggcggcg 1197 ||||||||||| || || ||| |||||||||| |||| ||||||||||||||||||||| Sbjct: 1073 acggtgcaccgcgtcgaggagctcaagtcgatcctccgcatgctgcccatctgggcggcg 1132 Query: 1198 ggcatcctcatggtgaccgcgtcgtcacacaacagcagcttcgcgatccagcaggcgcgc 1257 |||||||| |||||||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 1133 ggcatcctgctggtgacctcggcgtcgcacaacagcagcttcgcgatccagcaggcgcgc 1192 Query: 1258 accatggaccgcgacatcgcgcggagcttcaagatcccgccggcttccatgctcatcttc 1317 |||||||||||||||||| ||| | |||||||||||||||||| ||||||||||||||| Sbjct: 1193 accatggaccgcgacatcacgccgcacttcaagatcccgccggcctccatgctcatcttc 1252 Query: 1318 accaacctctccatgcttgtcaccctcgccttctacgaccgggtgctcgtccgcgtgctt 1377 ||||||||| ||||||| |||||||||||||||||||||| || |||||||||||||| Sbjct: 1253 accaacctcgccatgctgctcaccctcgccttctacgaccgcgtcctcgtccgcgtgctc 1312 Query: 1378 cgccgcttcaccggccgccccaacggcatcacccacctccagcgcgccggcgtcggcatg 1437 ||||||||||| |||| ||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 1313 cgccgcttcacgggccacccaaacggcatcacccacctccagcgcgccggcgtgggcatg 1372 Query: 1438 accatcgccatgctggcgaacgtggctgcggcagccgtcgagactcggcggaagtcagtg 1497 ||||| |||||||| || |||| || || || | ||| |||| ||| || ||||| ||| Sbjct: 1373 accattgccatgctcgccaacgcggtggccgcggtcgtggagagtcgccgcaagtccgtg 1432 Query: 1498 gccgcagccagcggcatgctcgacgcgcccaaaggcaccacgttgcccatcagtgtcttc 1557 ||||| || ||||||||||||||||||||||| || | | || |||||||||| |||||| Sbjct: 1433 gccgcggcgagcggcatgctcgacgcgcccaagggtagctcgctgcccatcagcgtcttc 1492 Query: 1558 tggctggtgccgcagtacgccatccacggtatcgccgacgcattcatggacgtcggccgc 1617 ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 1493 tggctggtgccgcagtacgccatccacggcgtcgccgacgccttcatggacgtcggccgc 1552 Query: 1618 atggagtttttgtacgaccaggcgcccgagagcatgaggagcactgcggcggcgctctac 1677 |||||||| | |||||||||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1553 atggagttcctctacgaccaggcgccggagagcatgcggagcaccgcggcggcgctctac 1612 Query: 1678 tggctcaccatctcggcggggagctacctcggcacgctgctggtgaccatcgtgcacgag 1737 ||||||||||| ||| || |||||||||||||||||||| || |||||| | |||| Sbjct: 1613 tggctcaccatgtcgatcggcagctacctcggcacgctgctcgtcaccatcatccacgcc 1672 Query: 1738 aagacgcaggcgagcgggcagtggctacaggacaacctcaacagagggaagctggataac 1797 ||||||||| ||||||||||||||| ||||||||||||||| ||| |||||||| | | Sbjct: 1673 aagacgcagcggagcgggcagtggctgcaggacaacctcaaccgagccaagctggacagc 1732 Query: 1798 tactactggctcgtcgtcggactgcaggggctcaacctcatctactacttcatatgtgtc 1857 ||||||||||||||| |||| ||||||||||||||||||||||||||||| | || ||| Sbjct: 1733 tactactggctcgtcttcggcttgcaggggctcaacctcatctactacttcgtctgcgtc 1792 Query: 1858 aagtactacacttttaagccactggagacgg 1888 | ||||||||| || |||||| ||||||||| Sbjct: 1793 aggtactacaccttcaagccattggagacgg 1823 Score = 490 bits (247), Expect = e-134 Identities = 406/459 (88%) Strand = Plus / Plus Query: 216 gaagaaggcgaagcagggcggcttcaggaccatgcccttcatcctagcgaacgacttctg 275 ||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 157 gaagaagccgaagcagggaggcttcaggaccatgccgttcatcctagcgaacgacttctg 216 Query: 276 cgaccggctggcgacggtggggttcgggtcgaacctgatctcctacctcaccctccagct 335 ||||||||| |||| ||||||||| | || ||||||||| | ||||| ||||| ||||| Sbjct: 217 cgaccggctcgcgaatgtggggttcagctccaacctgatcacgtacctgaccctgcagct 276 Query: 336 gcacctgccgctggtcgaggcctctaacgtgctcacgaactaccacggcacgaccaacct 395 |||||| || || ||||| ||||| ||| ||| || |||| ||||||||| ||||||| Sbjct: 277 gcacctccccctcgtcgacgcctccaacacgctgaccaacttccacggcaccgccaacct 336 Query: 396 cacgccgctcgtcggcggcctcatcgctgactccttcgcgggccgcttctggaccatcac 455 ||| ||||||||||||||||||||||| ||||||||||| ||| | |||||||||||||| Sbjct: 337 caccccgctcgtcggcggcctcatcgccgactccttcgccggcaggttctggaccatcac 396 Query: 456 cgtcggctccatcatctaccagctcggcatggtctgcctcaccctctccgccgcgctccc 515 |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 397 gttcggctccgtcatctaccagctcggcatggtcttcctcaccctctccgccgcgctccc 456 Query: 516 ctcgctccgcccgccgccgtgccccaagcacgcggtcgagtgccagcgcgcatccaccta 575 |||||||||||||||||| ||| |||||||||| | ||| ||||||||||| || ||| Sbjct: 457 ctcgctccgcccgccgccctgcgccaagcacgccgccgactgccagcgcgcctcgtcctc 516 Query: 576 ccagatcgccatcctctacctgtcgctgctctgcacgtccatcggctccgggggcacgcg 635 |||||||||| | |||||| |||||||||| ||| ||||||||| |||| |||||||| Sbjct: 517 ccagatcgccgtgctctacgcctcgctgctcttcacctccatcggcaccggcggcacgcg 576 Query: 636 cccctgcaacatggcgttcggcgccgaccagctcgagct 674 |||||||| |||||||||||||||||||||||||||||| Sbjct: 577 cccctgcatcatggcgttcggcgccgaccagctcgagct 615
>dbj|AK070558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060I20, full insert sequence Length = 2209 Score = 1243 bits (627), Expect = 0.0 Identities = 1035/1171 (88%) Strand = Plus / Plus Query: 718 cccatgtggagcttcttcaacctgtacttcttcggcattgagctcgccaagctcgcggcg 777 |||| |||||||||||||||||| |||||||||||||| ||||||||||||||| | || Sbjct: 654 cccaagtggagcttcttcaacctctacttcttcggcatcgagctcgccaagctcaccgcc 713 Query: 778 gtcaccgtggtggtgtacatccaggagaacgtcggctgggggtgggggctcggcgtgccc 837 |||||||| | ||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 714 gtcaccgtcatcgtgtacatccaggagaacgtcgggtgggggtggggcctcggcgtgccc 773 Query: 838 accatcgccatgttctttgccgtgatcggcttcgtgtccgggtactcgctatatgtcaag 897 ||||||||||||||| |||||| ||| |||||||||||| |||||| | || |||||| Sbjct: 774 accatcgccatgttcgccgccgtggtcgccttcgtgtccggctactcgatgtacgtcaag 833 Query: 898 atgccgcccggcggcagcccgcttgtccgcctggcgcaggtcgtctctgctgccttcaag 957 ||||| |||| ||||||||| || ||||| ||||||||||||| | || ||||||||| Sbjct: 834 atgcctcccgccggcagccccctggtccggctggcgcaggtcgcagccgccgccttcaag 893 Query: 958 aagaggaaaactgtcctgccggacccggacctcctgtacgaggacaagaagctcgacgcc 1017 ||||||||| | ||| ||||||| || || ||| |||||||||||| |||||||||| Sbjct: 894 aagaggaaagccgtcatgccggagccaagccgcctctacgaggacaaggtgctcgacgcc 953 Query: 1018 ggcatctccaccaccggccgtcttctccacaccaaccagctaaagttctttgacaaggcg 1077 ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 954 ggcatctccaccaccggccgtcttctccacaccgatcagctaaagttctttgacaaggcg 1013 Query: 1078 gccatagtgacagagggcgacgtgctgccgtccggcgagccgaagctgtggcggttgtcg 1137 ||||| | || || ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1014 gccattatcacggacggcgacgtgctgccgtccggcgagccgaagctgtggcggctgtcg 1073 Query: 1138 acggtgcaccgggtggaagagatcaagtcgattgtccggatgctgcccatctgggcggcg 1197 ||||||||||| || || ||| |||||||||| |||| ||||||||||||||||||||| Sbjct: 1074 acggtgcaccgcgtcgaggagctcaagtcgatcctccgcatgctgcccatctgggcggcg 1133 Query: 1198 ggcatcctcatggtgaccgcgtcgtcacacaacagcagcttcgcgatccagcaggcgcgc 1257 |||||||| |||||||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 1134 ggcatcctgctggtgacctcggcgtcgcacaacagcagcttcgcgatccagcaggcgcgc 1193 Query: 1258 accatggaccgcgacatcgcgcggagcttcaagatcccgccggcttccatgctcatcttc 1317 |||||||||||||||||| ||| | |||||||||||||||||| ||||||||||||||| Sbjct: 1194 accatggaccgcgacatcacgccgcacttcaagatcccgccggcctccatgctcatcttc 1253 Query: 1318 accaacctctccatgcttgtcaccctcgccttctacgaccgggtgctcgtccgcgtgctt 1377 ||||||||| ||||||| |||||||||||||||||||||| || |||||||||||||| Sbjct: 1254 accaacctcgccatgctgctcaccctcgccttctacgaccgcgtcctcgtccgcgtgctc 1313 Query: 1378 cgccgcttcaccggccgccccaacggcatcacccacctccagcgcgccggcgtcggcatg 1437 ||||||||||| |||| ||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 1314 cgccgcttcacgggccacccaaacggcatcacccacctccagcgcgccggcgtgggcatg 1373 Query: 1438 accatcgccatgctggcgaacgtggctgcggcagccgtcgagactcggcggaagtcagtg 1497 ||||| |||||||| || |||| || || || | ||| |||| ||| || ||||| ||| Sbjct: 1374 accattgccatgctcgccaacgcggtggccgcggtcgtggagagtcgccgcaagtccgtg 1433 Query: 1498 gccgcagccagcggcatgctcgacgcgcccaaaggcaccacgttgcccatcagtgtcttc 1557 ||||| || ||||||||||||||||||||||| || | | || |||||||||| |||||| Sbjct: 1434 gccgcggcgagcggcatgctcgacgcgcccaagggtagctcgctgcccatcagcgtcttc 1493 Query: 1558 tggctggtgccgcagtacgccatccacggtatcgccgacgcattcatggacgtcggccgc 1617 ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 1494 tggctggtgccgcagtacgccatccacggcgtcgccgacgccttcatggacgtcggccgc 1553 Query: 1618 atggagtttttgtacgaccaggcgcccgagagcatgaggagcactgcggcggcgctctac 1677 |||||||| | |||||||||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1554 atggagttcctctacgaccaggcgccggagagcatgcggagcaccgcggcggcgctctac 1613 Query: 1678 tggctcaccatctcggcggggagctacctcggcacgctgctggtgaccatcgtgcacgag 1737 ||||||||||| ||| || |||||||||||||||||||| || |||||| | |||| Sbjct: 1614 tggctcaccatgtcgatcggcagctacctcggcacgctgctcgtcaccatcatccacgcc 1673 Query: 1738 aagacgcaggcgagcgggcagtggctacaggacaacctcaacagagggaagctggataac 1797 ||||||||| ||||||||||||||| ||||||||||||||| ||| |||||||| | | Sbjct: 1674 aagacgcagcggagcgggcagtggctgcaggacaacctcaaccgagccaagctggacagc 1733 Query: 1798 tactactggctcgtcgtcggactgcaggggctcaacctcatctactacttcatatgtgtc 1857 ||||||||||||||| |||| ||||||||||||||||||||||||||||| | || ||| Sbjct: 1734 tactactggctcgtcttcggcttgcaggggctcaacctcatctactacttcgtctgcgtc 1793 Query: 1858 aagtactacacttttaagccactggagacgg 1888 | ||||||||| || |||||| ||||||||| Sbjct: 1794 aggtactacaccttcaagccattggagacgg 1824 Score = 490 bits (247), Expect = e-134 Identities = 406/459 (88%) Strand = Plus / Plus Query: 216 gaagaaggcgaagcagggcggcttcaggaccatgcccttcatcctagcgaacgacttctg 275 ||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 158 gaagaagccgaagcagggaggcttcaggaccatgccgttcatcctagcgaacgacttctg 217 Query: 276 cgaccggctggcgacggtggggttcgggtcgaacctgatctcctacctcaccctccagct 335 ||||||||| |||| ||||||||| | || ||||||||| | ||||| ||||| ||||| Sbjct: 218 cgaccggctcgcgaatgtggggttcagctccaacctgatcacgtacctgaccctgcagct 277 Query: 336 gcacctgccgctggtcgaggcctctaacgtgctcacgaactaccacggcacgaccaacct 395 |||||| || || ||||| ||||| ||| ||| || |||| ||||||||| ||||||| Sbjct: 278 gcacctccccctcgtcgacgcctccaacacgctgaccaacttccacggcaccgccaacct 337 Query: 396 cacgccgctcgtcggcggcctcatcgctgactccttcgcgggccgcttctggaccatcac 455 ||| ||||||||||||||||||||||| ||||||||||| ||| | |||||||||||||| Sbjct: 338 caccccgctcgtcggcggcctcatcgccgactccttcgccggcaggttctggaccatcac 397 Query: 456 cgtcggctccatcatctaccagctcggcatggtctgcctcaccctctccgccgcgctccc 515 |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 398 gttcggctccgtcatctaccagctcggcatggtcttcctcaccctctccgccgcgctccc 457 Query: 516 ctcgctccgcccgccgccgtgccccaagcacgcggtcgagtgccagcgcgcatccaccta 575 |||||||||||||||||| ||| |||||||||| | ||| ||||||||||| || ||| Sbjct: 458 ctcgctccgcccgccgccctgcgccaagcacgccgccgactgccagcgcgcctcgtcctc 517 Query: 576 ccagatcgccatcctctacctgtcgctgctctgcacgtccatcggctccgggggcacgcg 635 |||||||||| | |||||| |||||||||| ||| ||||||||| |||| |||||||| Sbjct: 518 ccagatcgccgtgctctacgcctcgctgctcttcacctccatcggcaccggcggcacgcg 577 Query: 636 cccctgcaacatggcgttcggcgccgaccagctcgagct 674 |||||||| |||||||||||||||||||||||||||||| Sbjct: 578 cccctgcatcatggcgttcggcgccgaccagctcgagct 616
>gb|AC130729.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668F02, complete sequence Length = 178061 Score = 902 bits (455), Expect = 0.0 Identities = 734/827 (88%) Strand = Plus / Minus Query: 1062 gttctttgacaaggcggccatagtgacagagggcgacgtgctgccgtccggcgagccgaa 1121 ||||||||||||||||||||| | || || ||||||||||||||||||||||||||||| Sbjct: 85323 gttctttgacaaggcggccattatcacggacggcgacgtgctgccgtccggcgagccgaa 85264 Query: 1122 gctgtggcggttgtcgacggtgcaccgggtggaagagatcaagtcgattgtccggatgct 1181 |||||||||| |||||||||||||||| || || ||| |||||||||| |||| ||||| Sbjct: 85263 gctgtggcggctgtcgacggtgcaccgcgtcgaggagctcaagtcgatcctccgcatgct 85204 Query: 1182 gcccatctgggcggcgggcatcctcatggtgaccgcgtcgtcacacaacagcagcttcgc 1241 |||||||||||||||||||||||| |||||||| || |||| ||||||||||||||||| Sbjct: 85203 gcccatctgggcggcgggcatcctgctggtgacctcggcgtcgcacaacagcagcttcgc 85144 Query: 1242 gatccagcaggcgcgcaccatggaccgcgacatcgcgcggagcttcaagatcccgccggc 1301 |||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||| Sbjct: 85143 gatccagcaggcgcgcaccatggaccgcgacatcacgccgcacttcaagatcccgccggc 85084 Query: 1302 ttccatgctcatcttcaccaacctctccatgcttgtcaccctcgccttctacgaccgggt 1361 |||||||||||||||||||||||| ||||||| |||||||||||||||||||||| || Sbjct: 85083 ctccatgctcatcttcaccaacctcgccatgctgctcaccctcgccttctacgaccgcgt 85024 Query: 1362 gctcgtccgcgtgcttcgccgcttcaccggccgccccaacggcatcacccacctccagcg 1421 |||||||||||||| ||||||||||| |||| ||| ||||||||||||||||||||||| Sbjct: 85023 cctcgtccgcgtgctccgccgcttcacgggccacccaaacggcatcacccacctccagcg 84964 Query: 1422 cgccggcgtcggcatgaccatcgccatgctggcgaacgtggctgcggcagccgtcgagac 1481 ||||||||| ||||||||||| |||||||| || |||| || || || | ||| |||| Sbjct: 84963 cgccggcgtgggcatgaccattgccatgctcgccaacgcggtggccgcggtcgtggagag 84904 Query: 1482 tcggcggaagtcagtggccgcagccagcggcatgctcgacgcgcccaaaggcaccacgtt 1541 ||| || ||||| |||||||| || ||||||||||||||||||||||| || | | || | Sbjct: 84903 tcgccgcaagtccgtggccgcggcgagcggcatgctcgacgcgcccaagggtagctcgct 84844 Query: 1542 gcccatcagtgtcttctggctggtgccgcagtacgccatccacggtatcgccgacgcatt 1601 ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 84843 gcccatcagcgtcttctggctggtgccgcagtacgccatccacggcgtcgccgacgcctt 84784 Query: 1602 catggacgtcggccgcatggagtttttgtacgaccaggcgcccgagagcatgaggagcac 1661 |||||||||||||||||||||||| | |||||||||||||| ||||||||| ||||||| Sbjct: 84783 catggacgtcggccgcatggagttcctctacgaccaggcgccggagagcatgcggagcac 84724 Query: 1662 tgcggcggcgctctactggctcaccatctcggcggggagctacctcggcacgctgctggt 1721 |||||||||||||||||||||||||| ||| || |||||||||||||||||||| || Sbjct: 84723 cgcggcggcgctctactggctcaccatgtcgatcggcagctacctcggcacgctgctcgt 84664 Query: 1722 gaccatcgtgcacgagaagacgcaggcgagcgggcagtggctacaggacaacctcaacag 1781 |||||| | |||| ||||||||| ||||||||||||||| ||||||||||||||| | Sbjct: 84663 caccatcatccacgccaagacgcagcggagcgggcagtggctgcaggacaacctcaaccg 84604 Query: 1782 agggaagctggataactactactggctcgtcgtcggactgcaggggctcaacctcatcta 1841 || |||||||| | |||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 84603 agccaagctggacagctactactggctcgtcttcggcttgcaggggctcaacctcatcta 84544 Query: 1842 ctacttcatatgtgtcaagtactacacttttaagccactggagacgg 1888 ||||||| | || |||| ||||||||| || |||||| ||||||||| Sbjct: 84543 ctacttcgtctgcgtcaggtactacaccttcaagccattggagacgg 84497 Score = 424 bits (214), Expect = e-115 Identities = 364/414 (87%) Strand = Plus / Minus Query: 261 agcgaacgacttctgcgaccggctggcgacggtggggttcgggtcgaacctgatctccta 320 |||||||||||||||||||||||| |||| ||||||||| | || ||||||||| | || Sbjct: 86197 agcgaacgacttctgcgaccggctcgcgaatgtggggttcagctccaacctgatcacgta 86138 Query: 321 cctcaccctccagctgcacctgccgctggtcgaggcctctaacgtgctcacgaactacca 380 ||| ||||| ||||||||||| || || ||||| ||||| ||| ||| || |||| ||| Sbjct: 86137 cctgaccctgcagctgcacctccccctcgtcgacgcctccaacacgctgaccaacttcca 86078 Query: 381 cggcacgaccaacctcacgccgctcgtcggcggcctcatcgctgactccttcgcgggccg 440 |||||| |||||||||| ||||||||||||||||||||||| ||||||||||| ||| | Sbjct: 86077 cggcaccgccaacctcaccccgctcgtcggcggcctcatcgccgactccttcgccggcag 86018 Query: 441 cttctggaccatcaccgtcggctccatcatctaccagctcggcatggtctgcctcaccct 500 |||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 86017 gttctggaccatcacgttcggctccgtcatctaccagctcggcatggtcttcctcaccct 85958 Query: 501 ctccgccgcgctcccctcgctccgcccgccgccgtgccccaagcacgcggtcgagtgcca 560 ||||||||||||||||||||||||||||||||| ||| |||||||||| | ||| ||||| Sbjct: 85957 ctccgccgcgctcccctcgctccgcccgccgccctgcgccaagcacgccgccgactgcca 85898 Query: 561 gcgcgcatccacctaccagatcgccatcctctacctgtcgctgctctgcacgtccatcgg 620 |||||| || ||| |||||||||| | |||||| |||||||||| ||| |||||||| Sbjct: 85897 gcgcgcctcgtcctcccagatcgccgtgctctacgcctcgctgctcttcacctccatcgg 85838 Query: 621 ctccgggggcacgcgcccctgcaacatggcgttcggcgccgaccagctcgagct 674 | |||| |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 85837 caccggcggcacgcgcccctgcatcatggcgttcggcgccgaccagctcgagct 85784 Score = 345 bits (174), Expect = 4e-91 Identities = 303/346 (87%) Strand = Plus / Minus Query: 718 cccatgtggagcttcttcaacctgtacttcttcggcattgagctcgccaagctcgcggcg 777 |||| |||||||||||||||||| |||||||||||||| ||||||||||||||| | || Sbjct: 85746 cccaagtggagcttcttcaacctctacttcttcggcatcgagctcgccaagctcaccgcc 85687 Query: 778 gtcaccgtggtggtgtacatccaggagaacgtcggctgggggtgggggctcggcgtgccc 837 |||||||| | ||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 85686 gtcaccgtcatcgtgtacatccaggagaacgtcgggtgggggtggggcctcggcgtgccc 85627 Query: 838 accatcgccatgttctttgccgtgatcggcttcgtgtccgggtactcgctatatgtcaag 897 ||||||||||||||| |||||| ||| |||||||||||| |||||| | || |||||| Sbjct: 85626 accatcgccatgttcgccgccgtggtcgccttcgtgtccggctactcgatgtacgtcaag 85567 Query: 898 atgccgcccggcggcagcccgcttgtccgcctggcgcaggtcgtctctgctgccttcaag 957 ||||| |||| ||||||||| || ||||| ||||||||||||| | || ||||||||| Sbjct: 85566 atgcctcccgccggcagccccctggtccggctggcgcaggtcgcagccgccgccttcaag 85507 Query: 958 aagaggaaaactgtcctgccggacccggacctcctgtacgaggacaagaagctcgacgcc 1017 ||||||||| | ||| ||||||| || || ||| |||||||||||| |||||||||| Sbjct: 85506 aagaggaaagccgtcatgccggagccaagccgcctctacgaggacaaggtgctcgacgcc 85447 Query: 1018 ggcatctccaccaccggccgtcttctccacaccaaccagctaaagt 1063 ||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 85446 ggcatctccaccaccggccgtcttctccacaccgatcagctaaagt 85401 Score = 208 bits (105), Expect = 6e-50 Identities = 221/257 (85%), Gaps = 2/257 (0%) Strand = Plus / Plus Query: 1556 tctggctggtgccgcagtacgccatccacggtatcgccgacgcattcatggacgtcggcc 1615 ||||| ||| ||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 97617 tctggatggcgccgcagtacgccatccacggcgcggccgacgcgttcatggacgtcggcc 97676 Query: 1616 gcatggagtttttgtacgaccaggcgcccgagagcatgaggagcactgcggcggcgctct 1675 |||||||||| |||||||||||||||||||| ||||| ||||||| ||||||||||| | Sbjct: 97677 gcatggagttcctgtacgaccaggcgcccgagggcatgcggagcacggcggcggcgctgt 97736 Query: 1676 actggctcaccatctcggcggggagctacctcggcacgctgctggtgaccatcgtgcacg 1735 ||||||| ||||| ||||||||||||||| | |||||||||||||||| ||||||| Sbjct: 97737 actggctgaccatgtcggcggggagctacatgagcacgctgctggtgacggcggtgcacg 97796 Query: 1736 agaaga-cgcaggcgagcgggcagtggctacaggacaacctcaacagagggaagctggat 1794 ||| || | |||||| ||| ||||||| ||||||||||||||| | |||| |||||| Sbjct: 97797 agaggaccagaggcga-aggggagtggctccaggacaacctcaaccgggggaggctggac 97855 Query: 1795 aactactactggctcgt 1811 ||||||||||||||| Sbjct: 97856 cgctactactggctcgt 97872 Score = 157 bits (79), Expect = 2e-34 Identities = 115/127 (90%) Strand = Plus / Plus Query: 723 gtggagcttcttcaacctgtacttcttcggcattgagctcgccaagctcgcggcggtcac 782 |||||||||||||||||| |||||||||||| |||||||||||||||| | ||| || || Sbjct: 96711 gtggagcttcttcaacctctacttcttcggcgttgagctcgccaagctggtggccgtgac 96770 Query: 783 cgtggtggtgtacatccaggagaacgtcggctgggggtgggggctcggcgtgcccaccat 842 | |||||||||||||||||||||||| || |||||||||||||||||||| || ||||| Sbjct: 96771 ggcggtggtgtacatccaggagaacgtggggtgggggtgggggctcggcgtcccgaccat 96830 Query: 843 cgccatg 849 ||||||| Sbjct: 96831 cgccatg 96837 Score = 147 bits (74), Expect = 2e-31 Identities = 251/310 (80%) Strand = Plus / Plus Query: 1125 gtggcggttgtcgacggtgcaccgggtggaagagatcaagtcgattgtccggatgctgcc 1184 ||||||| |||||||||||||||||||||| ||| |||||||||| |||| |||||||| Sbjct: 97189 gtggcggctgtcgacggtgcaccgggtggaggagctcaagtcgatcatccgcatgctgcc 97248 Query: 1185 catctgggcggcgggcatcctcatggtgaccgcgtcgtcacacaacagcagcttcgcgat 1244 ||||||||| ||||| ||||| |||| || || | || |||||| ||||||||| || Sbjct: 97249 catctgggccgcggggatcctgctggtcacgtcggcctcgcacaaccacagcttcgccat 97308 Query: 1245 ccagcaggcgcgcaccatggaccgcgacatcgcgcggagcttcaagatcccgccggcttc 1304 |||||||||||||||||||||||| | || || |||| | |||| |||||||| || Sbjct: 97309 ccagcaggcgcgcaccatggaccggcgcgtcacggcgagcctggagataccgccggcgtc 97368 Query: 1305 catgctcatcttcaccaacctctccatgcttgtcaccctcgccttctacgaccgggtgct 1364 |||||| |||||| ||||| || ||||||| | ||||| || |||||||||| | ||| Sbjct: 97369 catgctgatcttctccaacgtcgccatgctcgctaccctggcgctctacgaccgcgcgct 97428 Query: 1365 cgtccgcgtgcttcgccgcttcaccggccgccccaacggcatcacccacctccagcgcgc 1424 || | | ||| |||||| |||| || | |||| ||| ||||| |||||||||||| | Sbjct: 97429 ggtgccccggctgcgccgcctcacggggcaccccgccgggatcacgcacctccagcgcac 97488 Query: 1425 cggcgtcggc 1434 ||||||||| Sbjct: 97489 gggcgtcggc 97498 Score = 139 bits (70), Expect = 5e-29 Identities = 139/162 (85%) Strand = Plus / Minus Query: 1108 tccggcgagccgaagctgtggcggttgtcgacggtgcaccgggtggaagagatcaagtcg 1167 |||||||||||| | ||||||||| |||||||||||||||| ||||| ||| ||||||| Sbjct: 43272 tccggcgagccggacctgtggcggctgtcgacggtgcaccgcgtggaggagctcaagtcc 43213 Query: 1168 attgtccggatgctgcccatctgggcggcgggcatcctcatggtgaccgcgtcgtcacac 1227 || |||||| |||||||||||||| |||| |||||||| | | ||||| |||| ||| Sbjct: 43212 atcgtccggctgctgcccatctggtcggccggcatcctgctcgccaccgccgcgtcgcac 43153 Query: 1228 aacagcagcttcgcgatccagcaggcgcgcaccatggaccgc 1269 ||| ||| |||| | ||||||||||||||||||||||||||| Sbjct: 43152 aacggcaccttcaccatccagcaggcgcgcaccatggaccgc 43111 Score = 133 bits (67), Expect = 3e-27 Identities = 136/159 (85%) Strand = Plus / Plus Query: 1236 cttcgcgatccagcaggcgcgcaccatggaccgcgacatcgcgcggagcttcaagatccc 1295 |||||| ||||||||||||||||||||||||||| || |||||| ||||||| ||||||| Sbjct: 83280 cttcgccatccagcaggcgcgcaccatggaccgccacctcgcgccgagcttccagatccc 83339 Query: 1296 gccggcttccatgctcatcttcaccaacctctccatgcttgtcaccctcgccttctacga 1355 |||||| ||||| |||||||||||| || ||||||| |||| |||||| ||||||| Sbjct: 83340 gccggcgaccatgatcatcttcaccacgctgaccatgctcgtcagcctcgcgctctacga 83399 Query: 1356 ccgggtgctcgtccgcgtgcttcgccgcttcaccggccg 1394 ||| || ||||||| |||| ||||||| ||||||||| Sbjct: 83400 ccgcgtcctcgtccccgtggcgcgccgctacaccggccg 83438 Score = 127 bits (64), Expect = 2e-25 Identities = 139/164 (84%) Strand = Plus / Plus Query: 335 tgcacctgccgctggtcgaggcctctaacgtgctcacgaactaccacggcacgaccaacc 394 |||||||||||||||| ||||| || ||| |||||| |||| ||||||| || |||||| Sbjct: 96311 tgcacctgccgctggtggaggcgtccaacacgctcaccaacttccacggcgcgtccaacc 96370 Query: 395 tcacgccgctcgtcggcggcctcatcgctgactccttcgcgggccgcttctggaccatca 454 |||| ||| ||||||||||||||||||| ||||||||||| ||| | |||||||||||| Sbjct: 96371 tcacaccgatcgtcggcggcctcatcgccgactccttcgccggcaggttctggaccatcg 96430 Query: 455 ccgtcggctccatcatctaccagctcggcatggtctgcctcacc 498 ||| ||||| | |||||||||||||||||| |||||||| Sbjct: 96431 ccgcgggctcggtggcgtaccagctcggcatggtcggcctcacc 96474 Score = 123 bits (62), Expect = 3e-24 Identities = 185/226 (81%) Strand = Plus / Minus Query: 261 agcgaacgacttctgcgaccggctggcgacggtggggttcgggtcgaacctgatctccta 320 ||||||||| ||||||||||| | || |||| ||||||||| ||||||||||| | || Sbjct: 46173 agcgaacgagatctgcgaccggttcgccacggcggggttcggcgcgaacctgatcacgta 46114 Query: 321 cctcaccctccagctgcacctgccgctggtcgaggcctctaacgtgctcacgaactacca 380 ||| || | |||||||||||||||||||| ||||| || ||| ||| || |||| | | Sbjct: 46113 cctgacgcagcagctgcacctgccgctggtggaggcgtccaacacgctgaccaacttcaa 46054 Query: 381 cggcacgaccaacctcacgccgctcgtcggcggcctcatcgctgactccttcgcgggccg 440 ||||||| ||| |||||| ||| || | |||| ||| ||| ||| ||||||| ||||| Sbjct: 46053 cggcacgtccagcctcaccccgatcctgggcgcgctcgccgccgacgccttcgccggccg 45994 Query: 441 cttctggaccatcaccgtcggctccatcatctaccagctcggcatg 486 |||||||||||||| || ||| ||| || ||||||||||||||||| Sbjct: 45993 cttctggaccatcatcgccggatccgtcttctaccagctcggcatg 45948 Score = 111 bits (56), Expect = 1e-20 Identities = 83/92 (90%) Strand = Plus / Plus Query: 587 tcctctacctgtcgctgctctgcacgtccatcggctccgggggcacgcgcccctgcaaca 646 ||||||||||||| ||||||||||||||| ||||| |||| |||||||| || ||| || Sbjct: 96578 tcctctacctgtctctgctctgcacgtccgtcggcaccggcggcacgcggccgtgcgtca 96637 Query: 647 tggcgttcggcgccgaccagctcgagctgggc 678 |||||||||||||||||||| ||||||||||| Sbjct: 96638 tggcgttcggcgccgaccagttcgagctgggc 96669 Score = 89.7 bits (45), Expect = 4e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 1108 tccggcgagccgaagctgtggcggttgtcgacggtgcaccgggtggaagagatcaagtcg 1167 |||||||||||||| ||||||||| |||||||||||||||| ||||| ||| ||||||| Sbjct: 83152 tccggcgagccgaacctgtggcgggtgtcgacggtgcaccgcgtggaggagctcaagtcc 83211 Query: 1168 attgtccggatgctgcc 1184 || ||||| |||||||| Sbjct: 83212 atcgtccgcatgctgcc 83228 Score = 87.7 bits (44), Expect = 2e-13 Identities = 59/64 (92%) Strand = Plus / Plus Query: 995 acgaggacaagaagctcgacgccggcatctccaccaccggccgtcttctccacaccaacc 1054 |||| |||||| |||||||||||||| |||||||||||||||| || ||||||||||||| Sbjct: 96986 acgacgacaaggagctcgacgccggcgtctccaccaccggccggctgctccacaccaacc 97045 Query: 1055 agct 1058 |||| Sbjct: 97046 agct 97049 Score = 73.8 bits (37), Expect = 2e-09 Identities = 61/69 (88%) Strand = Plus / Minus Query: 784 gtggtggtgtacatccaggagaacgtcggctgggggtgggggctcggcgtgcccaccatc 843 |||||||||||||||||||||||||| || |||||||||||| |||| | || ||||| Sbjct: 45629 gtggtggtgtacatccaggagaacgtggggtgggggtgggggttcgggatcccggccatc 45570 Query: 844 gccatgttc 852 ||||||||| Sbjct: 45569 gccatgttc 45561 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 601 ctgctctgcacgtccatcggctccgggggcacgcgcccctgcaacatggcgttcggcgcc 660 ||||||||||||||| |||||||||| |||| ||||||||| |||||||||||||| Sbjct: 45827 ctgctctgcacgtccctcggctccggcggcatccgcccctgcgtggtggcgttcggcgcc 45768 Query: 661 gaccagctcga 671 |||||| |||| Sbjct: 45767 gaccagttcga 45757 Score = 69.9 bits (35), Expect = 4e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 216 gaagaaggcgaagcagggcggcttcaggaccatgcccttcatcctag 262 ||||||| |||||||||| ||||||||||||||||| |||||||||| Sbjct: 88296 gaagaagccgaagcagggaggcttcaggaccatgccgttcatcctag 88250 Score = 67.9 bits (34), Expect = 1e-07 Identities = 43/46 (93%) Strand = Plus / Minus Query: 1541 tgcccatcagtgtcttctggctggtgccgcagtacgccatccacgg 1586 |||||||||| || |||||||||||||||||||||||| ||||||| Sbjct: 42842 tgcccatcagcgtgttctggctggtgccgcagtacgccgtccacgg 42797 Score = 67.9 bits (34), Expect = 1e-07 Identities = 106/130 (81%) Strand = Plus / Plus Query: 723 gtggagcttcttcaacctgtacttcttcggcattgagctcgccaagctcgcggcggtcac 782 |||||||| ||||||||| ||||||||| |||| | ||||||| ||| || | || Sbjct: 82651 gtggagctacttcaacctctacttcttcagcatggggctcgccgtgctgctcgccctgac 82710 Query: 783 cgtggtggtgtacatccaggagaacgtcggctgggggtgggggctcggcgtgcccaccat 842 |||||||||||||||||||||| ||| || |||||||||||| |||| | || |||| Sbjct: 82711 ggtggtggtgtacatccaggagaccgtggggtgggggtgggggttcgggatcccggccat 82770 Query: 843 cgccatgttc 852 |||||||||| Sbjct: 82771 cgccatgttc 82780 Score = 63.9 bits (32), Expect = 2e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 1757 agtggctacaggacaacctcaacagagggaagctggataactactactggctcgtc 1812 ||||||| ||||||||| ||||||| |||| |||||| ||||||||||||||||| Sbjct: 83792 agtggctccaggacaacatcaacagggggaggctggactactactactggctcgtc 83847 Score = 54.0 bits (27), Expect = 0.002 Identities = 57/67 (85%) Strand = Plus / Minus Query: 1617 catggagtttttgtacgaccaggcgcccgagagcatgaggagcactgcggcggcgctcta 1676 ||||||||| |||||||||||||||| ||||||||| | |||| || || ||||||| Sbjct: 42766 catggagttcctgtacgaccaggcgccggagagcatgcgcagcagcgccgccgcgctctt 42707 Query: 1677 ctggctc 1683 ||||||| Sbjct: 42706 ctggctc 42700 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 424 gactccttcgcgggccgcttctggaccatcaccgtcggc 462 ||||||||||| |||||||||||||||||| ||| |||| Sbjct: 82364 gactccttcgccggccgcttctggaccatcgccggcggc 82402 Score = 52.0 bits (26), Expect = 0.008 Identities = 38/42 (90%) Strand = Plus / Minus Query: 216 gaagaaggcgaagcagggcggcttcaggaccatgcccttcat 257 ||||||| ||||||||| ||||||||||||||||| ||||| Sbjct: 47545 gaagaagaggaagcagggaggcttcaggaccatgccattcat 47504 Score = 52.0 bits (26), Expect = 0.008 Identities = 41/46 (89%) Strand = Plus / Plus Query: 331 cagctgcacctgccgctggtcgaggcctctaacgtgctcacgaact 376 |||||||||||||||||||| |||||||| ||| | ||||| |||| Sbjct: 82271 cagctgcacctgccgctggtggaggcctcgaacctcctcaccaact 82316 Score = 50.1 bits (25), Expect = 0.033 Identities = 49/57 (85%) Strand = Plus / Plus Query: 1617 catggagtttttgtacgaccaggcgcccgagagcatgaggagcactgcggcggcgct 1673 ||||||||| | ||||||||| |||| ||||||||| ||||| | ||||||||||| Sbjct: 83658 catggagttcctctacgaccagtcgccggagagcatgcggagctcggcggcggcgct 83714 Score = 48.1 bits (24), Expect = 0.13 Identities = 57/68 (83%) Strand = Plus / Minus Query: 991 ctgtacgaggacaagaagctcgacgccggcatctccaccaccggccgtcttctccacacc 1050 |||||| |||||||| |||||||||| ||||||||||| ||| | || |||||||| Sbjct: 45419 ctgtaccaggacaaggagctcgacgcgctcatctccaccaatggcaggctgctccacaca 45360 Query: 1051 aaccagct 1058 |||||||| Sbjct: 45359 aaccagct 45352 Score = 46.1 bits (23), Expect = 0.51 Identities = 29/31 (93%) Strand = Plus / Plus Query: 581 tcgccatcctctacctgtcgctgctctgcac 611 ||||||| || |||||||||||||||||||| Sbjct: 82527 tcgccatgctgtacctgtcgctgctctgcac 82557
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 902 bits (455), Expect = 0.0 Identities = 734/827 (88%) Strand = Plus / Minus Query: 1062 gttctttgacaaggcggccatagtgacagagggcgacgtgctgccgtccggcgagccgaa 1121 ||||||||||||||||||||| | || || ||||||||||||||||||||||||||||| Sbjct: 19944159 gttctttgacaaggcggccattatcacggacggcgacgtgctgccgtccggcgagccgaa 19944100 Query: 1122 gctgtggcggttgtcgacggtgcaccgggtggaagagatcaagtcgattgtccggatgct 1181 |||||||||| |||||||||||||||| || || ||| |||||||||| |||| ||||| Sbjct: 19944099 gctgtggcggctgtcgacggtgcaccgcgtcgaggagctcaagtcgatcctccgcatgct 19944040 Query: 1182 gcccatctgggcggcgggcatcctcatggtgaccgcgtcgtcacacaacagcagcttcgc 1241 |||||||||||||||||||||||| |||||||| || |||| ||||||||||||||||| Sbjct: 19944039 gcccatctgggcggcgggcatcctgctggtgacctcggcgtcgcacaacagcagcttcgc 19943980 Query: 1242 gatccagcaggcgcgcaccatggaccgcgacatcgcgcggagcttcaagatcccgccggc 1301 |||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||| Sbjct: 19943979 gatccagcaggcgcgcaccatggaccgcgacatcacgccgcacttcaagatcccgccggc 19943920 Query: 1302 ttccatgctcatcttcaccaacctctccatgcttgtcaccctcgccttctacgaccgggt 1361 |||||||||||||||||||||||| ||||||| |||||||||||||||||||||| || Sbjct: 19943919 ctccatgctcatcttcaccaacctcgccatgctgctcaccctcgccttctacgaccgcgt 19943860 Query: 1362 gctcgtccgcgtgcttcgccgcttcaccggccgccccaacggcatcacccacctccagcg 1421 |||||||||||||| ||||||||||| |||| ||| ||||||||||||||||||||||| Sbjct: 19943859 cctcgtccgcgtgctccgccgcttcacgggccacccaaacggcatcacccacctccagcg 19943800 Query: 1422 cgccggcgtcggcatgaccatcgccatgctggcgaacgtggctgcggcagccgtcgagac 1481 ||||||||| ||||||||||| |||||||| || |||| || || || | ||| |||| Sbjct: 19943799 cgccggcgtgggcatgaccattgccatgctcgccaacgcggtggccgcggtcgtggagag 19943740 Query: 1482 tcggcggaagtcagtggccgcagccagcggcatgctcgacgcgcccaaaggcaccacgtt 1541 ||| || ||||| |||||||| || ||||||||||||||||||||||| || | | || | Sbjct: 19943739 tcgccgcaagtccgtggccgcggcgagcggcatgctcgacgcgcccaagggtagctcgct 19943680 Query: 1542 gcccatcagtgtcttctggctggtgccgcagtacgccatccacggtatcgccgacgcatt 1601 ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 19943679 gcccatcagcgtcttctggctggtgccgcagtacgccatccacggcgtcgccgacgcctt 19943620 Query: 1602 catggacgtcggccgcatggagtttttgtacgaccaggcgcccgagagcatgaggagcac 1661 |||||||||||||||||||||||| | |||||||||||||| ||||||||| ||||||| Sbjct: 19943619 catggacgtcggccgcatggagttcctctacgaccaggcgccggagagcatgcggagcac 19943560 Query: 1662 tgcggcggcgctctactggctcaccatctcggcggggagctacctcggcacgctgctggt 1721 |||||||||||||||||||||||||| ||| || |||||||||||||||||||| || Sbjct: 19943559 cgcggcggcgctctactggctcaccatgtcgatcggcagctacctcggcacgctgctcgt 19943500 Query: 1722 gaccatcgtgcacgagaagacgcaggcgagcgggcagtggctacaggacaacctcaacag 1781 |||||| | |||| ||||||||| ||||||||||||||| ||||||||||||||| | Sbjct: 19943499 caccatcatccacgccaagacgcagcggagcgggcagtggctgcaggacaacctcaaccg 19943440 Query: 1782 agggaagctggataactactactggctcgtcgtcggactgcaggggctcaacctcatcta 1841 || |||||||| | |||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 19943439 agccaagctggacagctactactggctcgtcttcggcttgcaggggctcaacctcatcta 19943380 Query: 1842 ctacttcatatgtgtcaagtactacacttttaagccactggagacgg 1888 ||||||| | || |||| ||||||||| || |||||| ||||||||| Sbjct: 19943379 ctacttcgtctgcgtcaggtactacaccttcaagccattggagacgg 19943333 Score = 424 bits (214), Expect = e-115 Identities = 364/414 (87%) Strand = Plus / Minus Query: 261 agcgaacgacttctgcgaccggctggcgacggtggggttcgggtcgaacctgatctccta 320 |||||||||||||||||||||||| |||| ||||||||| | || ||||||||| | || Sbjct: 19945033 agcgaacgacttctgcgaccggctcgcgaatgtggggttcagctccaacctgatcacgta 19944974 Query: 321 cctcaccctccagctgcacctgccgctggtcgaggcctctaacgtgctcacgaactacca 380 ||| ||||| ||||||||||| || || ||||| ||||| ||| ||| || |||| ||| Sbjct: 19944973 cctgaccctgcagctgcacctccccctcgtcgacgcctccaacacgctgaccaacttcca 19944914 Query: 381 cggcacgaccaacctcacgccgctcgtcggcggcctcatcgctgactccttcgcgggccg 440 |||||| |||||||||| ||||||||||||||||||||||| ||||||||||| ||| | Sbjct: 19944913 cggcaccgccaacctcaccccgctcgtcggcggcctcatcgccgactccttcgccggcag 19944854 Query: 441 cttctggaccatcaccgtcggctccatcatctaccagctcggcatggtctgcctcaccct 500 |||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 19944853 gttctggaccatcacgttcggctccgtcatctaccagctcggcatggtcttcctcaccct 19944794 Query: 501 ctccgccgcgctcccctcgctccgcccgccgccgtgccccaagcacgcggtcgagtgcca 560 ||||||||||||||||||||||||||||||||| ||| |||||||||| | ||| ||||| Sbjct: 19944793 ctccgccgcgctcccctcgctccgcccgccgccctgcgccaagcacgccgccgactgcca 19944734 Query: 561 gcgcgcatccacctaccagatcgccatcctctacctgtcgctgctctgcacgtccatcgg 620 |||||| || ||| |||||||||| | |||||| |||||||||| ||| |||||||| Sbjct: 19944733 gcgcgcctcgtcctcccagatcgccgtgctctacgcctcgctgctcttcacctccatcgg 19944674 Query: 621 ctccgggggcacgcgcccctgcaacatggcgttcggcgccgaccagctcgagct 674 | |||| |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 19944673 caccggcggcacgcgcccctgcatcatggcgttcggcgccgaccagctcgagct 19944620 Score = 345 bits (174), Expect = 4e-91 Identities = 303/346 (87%) Strand = Plus / Minus Query: 718 cccatgtggagcttcttcaacctgtacttcttcggcattgagctcgccaagctcgcggcg 777 |||| |||||||||||||||||| |||||||||||||| ||||||||||||||| | || Sbjct: 19944582 cccaagtggagcttcttcaacctctacttcttcggcatcgagctcgccaagctcaccgcc 19944523 Query: 778 gtcaccgtggtggtgtacatccaggagaacgtcggctgggggtgggggctcggcgtgccc 837 |||||||| | ||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 19944522 gtcaccgtcatcgtgtacatccaggagaacgtcgggtgggggtggggcctcggcgtgccc 19944463 Query: 838 accatcgccatgttctttgccgtgatcggcttcgtgtccgggtactcgctatatgtcaag 897 ||||||||||||||| |||||| ||| |||||||||||| |||||| | || |||||| Sbjct: 19944462 accatcgccatgttcgccgccgtggtcgccttcgtgtccggctactcgatgtacgtcaag 19944403 Query: 898 atgccgcccggcggcagcccgcttgtccgcctggcgcaggtcgtctctgctgccttcaag 957 ||||| |||| ||||||||| || ||||| ||||||||||||| | || ||||||||| Sbjct: 19944402 atgcctcccgccggcagccccctggtccggctggcgcaggtcgcagccgccgccttcaag 19944343 Query: 958 aagaggaaaactgtcctgccggacccggacctcctgtacgaggacaagaagctcgacgcc 1017 ||||||||| | ||| ||||||| || || ||| |||||||||||| |||||||||| Sbjct: 19944342 aagaggaaagccgtcatgccggagccaagccgcctctacgaggacaaggtgctcgacgcc 19944283 Query: 1018 ggcatctccaccaccggccgtcttctccacaccaaccagctaaagt 1063 ||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 19944282 ggcatctccaccaccggccgtcttctccacaccgatcagctaaagt 19944237 Score = 208 bits (105), Expect = 6e-50 Identities = 221/257 (85%), Gaps = 2/257 (0%) Strand = Plus / Plus Query: 1556 tctggctggtgccgcagtacgccatccacggtatcgccgacgcattcatggacgtcggcc 1615 ||||| ||| ||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 19956453 tctggatggcgccgcagtacgccatccacggcgcggccgacgcgttcatggacgtcggcc 19956512 Query: 1616 gcatggagtttttgtacgaccaggcgcccgagagcatgaggagcactgcggcggcgctct 1675 |||||||||| |||||||||||||||||||| ||||| ||||||| ||||||||||| | Sbjct: 19956513 gcatggagttcctgtacgaccaggcgcccgagggcatgcggagcacggcggcggcgctgt 19956572 Query: 1676 actggctcaccatctcggcggggagctacctcggcacgctgctggtgaccatcgtgcacg 1735 ||||||| ||||| ||||||||||||||| | |||||||||||||||| ||||||| Sbjct: 19956573 actggctgaccatgtcggcggggagctacatgagcacgctgctggtgacggcggtgcacg 19956632 Query: 1736 agaaga-cgcaggcgagcgggcagtggctacaggacaacctcaacagagggaagctggat 1794 ||| || | |||||| ||| ||||||| ||||||||||||||| | |||| |||||| Sbjct: 19956633 agaggaccagaggcga-aggggagtggctccaggacaacctcaaccgggggaggctggac 19956691 Query: 1795 aactactactggctcgt 1811 ||||||||||||||| Sbjct: 19956692 cgctactactggctcgt 19956708 Score = 157 bits (79), Expect = 2e-34 Identities = 115/127 (90%) Strand = Plus / Plus Query: 723 gtggagcttcttcaacctgtacttcttcggcattgagctcgccaagctcgcggcggtcac 782 |||||||||||||||||| |||||||||||| |||||||||||||||| | ||| || || Sbjct: 19955547 gtggagcttcttcaacctctacttcttcggcgttgagctcgccaagctggtggccgtgac 19955606 Query: 783 cgtggtggtgtacatccaggagaacgtcggctgggggtgggggctcggcgtgcccaccat 842 | |||||||||||||||||||||||| || |||||||||||||||||||| || ||||| Sbjct: 19955607 ggcggtggtgtacatccaggagaacgtggggtgggggtgggggctcggcgtcccgaccat 19955666 Query: 843 cgccatg 849 ||||||| Sbjct: 19955667 cgccatg 19955673 Score = 147 bits (74), Expect = 2e-31 Identities = 251/310 (80%) Strand = Plus / Plus Query: 1125 gtggcggttgtcgacggtgcaccgggtggaagagatcaagtcgattgtccggatgctgcc 1184 ||||||| |||||||||||||||||||||| ||| |||||||||| |||| |||||||| Sbjct: 19956025 gtggcggctgtcgacggtgcaccgggtggaggagctcaagtcgatcatccgcatgctgcc 19956084 Query: 1185 catctgggcggcgggcatcctcatggtgaccgcgtcgtcacacaacagcagcttcgcgat 1244 ||||||||| ||||| ||||| |||| || || | || |||||| ||||||||| || Sbjct: 19956085 catctgggccgcggggatcctgctggtcacgtcggcctcgcacaaccacagcttcgccat 19956144 Query: 1245 ccagcaggcgcgcaccatggaccgcgacatcgcgcggagcttcaagatcccgccggcttc 1304 |||||||||||||||||||||||| | || || |||| | |||| |||||||| || Sbjct: 19956145 ccagcaggcgcgcaccatggaccggcgcgtcacggcgagcctggagataccgccggcgtc 19956204 Query: 1305 catgctcatcttcaccaacctctccatgcttgtcaccctcgccttctacgaccgggtgct 1364 |||||| |||||| ||||| || ||||||| | ||||| || |||||||||| | ||| Sbjct: 19956205 catgctgatcttctccaacgtcgccatgctcgctaccctggcgctctacgaccgcgcgct 19956264 Query: 1365 cgtccgcgtgcttcgccgcttcaccggccgccccaacggcatcacccacctccagcgcgc 1424 || | | ||| |||||| |||| || | |||| ||| ||||| |||||||||||| | Sbjct: 19956265 ggtgccccggctgcgccgcctcacggggcaccccgccgggatcacgcacctccagcgcac 19956324 Query: 1425 cggcgtcggc 1434 ||||||||| Sbjct: 19956325 gggcgtcggc 19956334 Score = 139 bits (70), Expect = 5e-29 Identities = 139/162 (85%) Strand = Plus / Minus Query: 1108 tccggcgagccgaagctgtggcggttgtcgacggtgcaccgggtggaagagatcaagtcg 1167 |||||||||||| | ||||||||| |||||||||||||||| ||||| ||| ||||||| Sbjct: 19902108 tccggcgagccggacctgtggcggctgtcgacggtgcaccgcgtggaggagctcaagtcc 19902049 Query: 1168 attgtccggatgctgcccatctgggcggcgggcatcctcatggtgaccgcgtcgtcacac 1227 || |||||| |||||||||||||| |||| |||||||| | | ||||| |||| ||| Sbjct: 19902048 atcgtccggctgctgcccatctggtcggccggcatcctgctcgccaccgccgcgtcgcac 19901989 Query: 1228 aacagcagcttcgcgatccagcaggcgcgcaccatggaccgc 1269 ||| ||| |||| | ||||||||||||||||||||||||||| Sbjct: 19901988 aacggcaccttcaccatccagcaggcgcgcaccatggaccgc 19901947 Score = 133 bits (67), Expect = 3e-27 Identities = 136/159 (85%) Strand = Plus / Plus Query: 1236 cttcgcgatccagcaggcgcgcaccatggaccgcgacatcgcgcggagcttcaagatccc 1295 |||||| ||||||||||||||||||||||||||| || |||||| ||||||| ||||||| Sbjct: 19942116 cttcgccatccagcaggcgcgcaccatggaccgccacctcgcgccgagcttccagatccc 19942175 Query: 1296 gccggcttccatgctcatcttcaccaacctctccatgcttgtcaccctcgccttctacga 1355 |||||| ||||| |||||||||||| || ||||||| |||| |||||| ||||||| Sbjct: 19942176 gccggcgaccatgatcatcttcaccacgctgaccatgctcgtcagcctcgcgctctacga 19942235 Query: 1356 ccgggtgctcgtccgcgtgcttcgccgcttcaccggccg 1394 ||| || ||||||| |||| ||||||| ||||||||| Sbjct: 19942236 ccgcgtcctcgtccccgtggcgcgccgctacaccggccg 19942274 Score = 127 bits (64), Expect = 2e-25 Identities = 139/164 (84%) Strand = Plus / Plus Query: 335 tgcacctgccgctggtcgaggcctctaacgtgctcacgaactaccacggcacgaccaacc 394 |||||||||||||||| ||||| || ||| |||||| |||| ||||||| || |||||| Sbjct: 19955147 tgcacctgccgctggtggaggcgtccaacacgctcaccaacttccacggcgcgtccaacc 19955206 Query: 395 tcacgccgctcgtcggcggcctcatcgctgactccttcgcgggccgcttctggaccatca 454 |||| ||| ||||||||||||||||||| ||||||||||| ||| | |||||||||||| Sbjct: 19955207 tcacaccgatcgtcggcggcctcatcgccgactccttcgccggcaggttctggaccatcg 19955266 Query: 455 ccgtcggctccatcatctaccagctcggcatggtctgcctcacc 498 ||| ||||| | |||||||||||||||||| |||||||| Sbjct: 19955267 ccgcgggctcggtggcgtaccagctcggcatggtcggcctcacc 19955310 Score = 123 bits (62), Expect = 3e-24 Identities = 185/226 (81%) Strand = Plus / Minus Query: 261 agcgaacgacttctgcgaccggctggcgacggtggggttcgggtcgaacctgatctccta 320 ||||||||| ||||||||||| | || |||| ||||||||| ||||||||||| | || Sbjct: 19905009 agcgaacgagatctgcgaccggttcgccacggcggggttcggcgcgaacctgatcacgta 19904950 Query: 321 cctcaccctccagctgcacctgccgctggtcgaggcctctaacgtgctcacgaactacca 380 ||| || | |||||||||||||||||||| ||||| || ||| ||| || |||| | | Sbjct: 19904949 cctgacgcagcagctgcacctgccgctggtggaggcgtccaacacgctgaccaacttcaa 19904890 Query: 381 cggcacgaccaacctcacgccgctcgtcggcggcctcatcgctgactccttcgcgggccg 440 ||||||| ||| |||||| ||| || | |||| ||| ||| ||| ||||||| ||||| Sbjct: 19904889 cggcacgtccagcctcaccccgatcctgggcgcgctcgccgccgacgccttcgccggccg 19904830 Query: 441 cttctggaccatcaccgtcggctccatcatctaccagctcggcatg 486 |||||||||||||| || ||| ||| || ||||||||||||||||| Sbjct: 19904829 cttctggaccatcatcgccggatccgtcttctaccagctcggcatg 19904784 Score = 111 bits (56), Expect = 1e-20 Identities = 83/92 (90%) Strand = Plus / Plus Query: 587 tcctctacctgtcgctgctctgcacgtccatcggctccgggggcacgcgcccctgcaaca 646 ||||||||||||| ||||||||||||||| ||||| |||| |||||||| || ||| || Sbjct: 19955414 tcctctacctgtctctgctctgcacgtccgtcggcaccggcggcacgcggccgtgcgtca 19955473 Query: 647 tggcgttcggcgccgaccagctcgagctgggc 678 |||||||||||||||||||| ||||||||||| Sbjct: 19955474 tggcgttcggcgccgaccagttcgagctgggc 19955505 Score = 89.7 bits (45), Expect = 4e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 1108 tccggcgagccgaagctgtggcggttgtcgacggtgcaccgggtggaagagatcaagtcg 1167 |||||||||||||| ||||||||| |||||||||||||||| ||||| ||| ||||||| Sbjct: 19941988 tccggcgagccgaacctgtggcgggtgtcgacggtgcaccgcgtggaggagctcaagtcc 19942047 Query: 1168 attgtccggatgctgcc 1184 || ||||| |||||||| Sbjct: 19942048 atcgtccgcatgctgcc 19942064 Score = 87.7 bits (44), Expect = 2e-13 Identities = 59/64 (92%) Strand = Plus / Plus Query: 995 acgaggacaagaagctcgacgccggcatctccaccaccggccgtcttctccacaccaacc 1054 |||| |||||| |||||||||||||| |||||||||||||||| || ||||||||||||| Sbjct: 19955822 acgacgacaaggagctcgacgccggcgtctccaccaccggccggctgctccacaccaacc 19955881 Query: 1055 agct 1058 |||| Sbjct: 19955882 agct 19955885 Score = 73.8 bits (37), Expect = 2e-09 Identities = 61/69 (88%) Strand = Plus / Minus Query: 784 gtggtggtgtacatccaggagaacgtcggctgggggtgggggctcggcgtgcccaccatc 843 |||||||||||||||||||||||||| || |||||||||||| |||| | || ||||| Sbjct: 19904465 gtggtggtgtacatccaggagaacgtggggtgggggtgggggttcgggatcccggccatc 19904406 Query: 844 gccatgttc 852 ||||||||| Sbjct: 19904405 gccatgttc 19904397 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 601 ctgctctgcacgtccatcggctccgggggcacgcgcccctgcaacatggcgttcggcgcc 660 ||||||||||||||| |||||||||| |||| ||||||||| |||||||||||||| Sbjct: 19904663 ctgctctgcacgtccctcggctccggcggcatccgcccctgcgtggtggcgttcggcgcc 19904604 Query: 661 gaccagctcga 671 |||||| |||| Sbjct: 19904603 gaccagttcga 19904593 Score = 69.9 bits (35), Expect = 4e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 216 gaagaaggcgaagcagggcggcttcaggaccatgcccttcatcctag 262 ||||||| |||||||||| ||||||||||||||||| |||||||||| Sbjct: 19947132 gaagaagccgaagcagggaggcttcaggaccatgccgttcatcctag 19947086 Score = 67.9 bits (34), Expect = 1e-07 Identities = 43/46 (93%) Strand = Plus / Minus Query: 1541 tgcccatcagtgtcttctggctggtgccgcagtacgccatccacgg 1586 |||||||||| || |||||||||||||||||||||||| ||||||| Sbjct: 19901678 tgcccatcagcgtgttctggctggtgccgcagtacgccgtccacgg 19901633 Score = 67.9 bits (34), Expect = 1e-07 Identities = 106/130 (81%) Strand = Plus / Plus Query: 723 gtggagcttcttcaacctgtacttcttcggcattgagctcgccaagctcgcggcggtcac 782 |||||||| ||||||||| ||||||||| |||| | ||||||| ||| || | || Sbjct: 19941487 gtggagctacttcaacctctacttcttcagcatggggctcgccgtgctgctcgccctgac 19941546 Query: 783 cgtggtggtgtacatccaggagaacgtcggctgggggtgggggctcggcgtgcccaccat 842 |||||||||||||||||||||| ||| || |||||||||||| |||| | || |||| Sbjct: 19941547 ggtggtggtgtacatccaggagaccgtggggtgggggtgggggttcgggatcccggccat 19941606 Query: 843 cgccatgttc 852 |||||||||| Sbjct: 19941607 cgccatgttc 19941616 Score = 63.9 bits (32), Expect = 2e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 1757 agtggctacaggacaacctcaacagagggaagctggataactactactggctcgtc 1812 ||||||| ||||||||| ||||||| |||| |||||| ||||||||||||||||| Sbjct: 19942628 agtggctccaggacaacatcaacagggggaggctggactactactactggctcgtc 19942683 Score = 54.0 bits (27), Expect = 0.002 Identities = 57/67 (85%) Strand = Plus / Minus Query: 1617 catggagtttttgtacgaccaggcgcccgagagcatgaggagcactgcggcggcgctcta 1676 ||||||||| |||||||||||||||| ||||||||| | |||| || || ||||||| Sbjct: 19901602 catggagttcctgtacgaccaggcgccggagagcatgcgcagcagcgccgccgcgctctt 19901543 Query: 1677 ctggctc 1683 ||||||| Sbjct: 19901542 ctggctc 19901536 Score = 54.0 bits (27), Expect = 0.002 Identities = 36/39 (92%) Strand = Plus / Plus Query: 424 gactccttcgcgggccgcttctggaccatcaccgtcggc 462 ||||||||||| |||||||||||||||||| ||| |||| Sbjct: 19941200 gactccttcgccggccgcttctggaccatcgccggcggc 19941238 Score = 52.0 bits (26), Expect = 0.008 Identities = 38/42 (90%) Strand = Plus / Minus Query: 216 gaagaaggcgaagcagggcggcttcaggaccatgcccttcat 257 ||||||| ||||||||| ||||||||||||||||| ||||| Sbjct: 19906381 gaagaagaggaagcagggaggcttcaggaccatgccattcat 19906340 Score = 52.0 bits (26), Expect = 0.008 Identities = 41/46 (89%) Strand = Plus / Plus Query: 331 cagctgcacctgccgctggtcgaggcctctaacgtgctcacgaact 376 |||||||||||||||||||| |||||||| ||| | ||||| |||| Sbjct: 19941107 cagctgcacctgccgctggtggaggcctcgaacctcctcaccaact 19941152 Score = 50.1 bits (25), Expect = 0.033 Identities = 49/57 (85%) Strand = Plus / Plus Query: 1617 catggagtttttgtacgaccaggcgcccgagagcatgaggagcactgcggcggcgct 1673 ||||||||| | ||||||||| |||| ||||||||| ||||| | ||||||||||| Sbjct: 19942494 catggagttcctctacgaccagtcgccggagagcatgcggagctcggcggcggcgct 19942550 Score = 48.1 bits (24), Expect = 0.13 Identities = 36/40 (90%) Strand = Plus / Minus Query: 436 ggccgcttctggaccatcaccgtcggctccatcatctacc 475 ||||||||||||||| |||||||| |||| ||||||||| Sbjct: 15588293 ggccgcttctggaccttcaccgtctcctccctcatctacc 15588254 Score = 48.1 bits (24), Expect = 0.13 Identities = 57/68 (83%) Strand = Plus / Minus Query: 991 ctgtacgaggacaagaagctcgacgccggcatctccaccaccggccgtcttctccacacc 1050 |||||| |||||||| |||||||||| ||||||||||| ||| | || |||||||| Sbjct: 19904255 ctgtaccaggacaaggagctcgacgcgctcatctccaccaatggcaggctgctccacaca 19904196 Query: 1051 aaccagct 1058 |||||||| Sbjct: 19904195 aaccagct 19904188 Score = 46.1 bits (23), Expect = 0.51 Identities = 29/31 (93%) Strand = Plus / Plus Query: 581 tcgccatcctctacctgtcgctgctctgcac 611 ||||||| || |||||||||||||||||||| Sbjct: 19941363 tcgccatgctgtacctgtcgctgctctgcac 19941393 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 797 tccaggagaacgtcggctgggg 818 |||||||||||||||||||||| Sbjct: 15569754 tccaggagaacgtcggctgggg 15569733
>ref|NM_001062068.1| Oryza sativa (japonica cultivar-group) Os05g0410500 (Os05g0410500) mRNA, complete cds Length = 2048 Score = 139 bits (70), Expect = 5e-29 Identities = 139/162 (85%) Strand = Plus / Plus Query: 1108 tccggcgagccgaagctgtggcggttgtcgacggtgcaccgggtggaagagatcaagtcg 1167 |||||||||||| | ||||||||| |||||||||||||||| ||||| ||| ||||||| Sbjct: 890 tccggcgagccggacctgtggcggctgtcgacggtgcaccgcgtggaggagctcaagtcc 949 Query: 1168 attgtccggatgctgcccatctgggcggcgggcatcctcatggtgaccgcgtcgtcacac 1227 || |||||| |||||||||||||| |||| |||||||| | | ||||| |||| ||| Sbjct: 950 atcgtccggctgctgcccatctggtcggccggcatcctgctcgccaccgccgcgtcgcac 1009 Query: 1228 aacagcagcttcgcgatccagcaggcgcgcaccatggaccgc 1269 ||| ||| |||| | ||||||||||||||||||||||||||| Sbjct: 1010 aacggcaccttcaccatccagcaggcgcgcaccatggaccgc 1051 Score = 123 bits (62), Expect = 3e-24 Identities = 185/226 (81%) Strand = Plus / Plus Query: 261 agcgaacgacttctgcgaccggctggcgacggtggggttcgggtcgaacctgatctccta 320 ||||||||| ||||||||||| | || |||| ||||||||| ||||||||||| | || Sbjct: 19 agcgaacgagatctgcgaccggttcgccacggcggggttcggcgcgaacctgatcacgta 78 Query: 321 cctcaccctccagctgcacctgccgctggtcgaggcctctaacgtgctcacgaactacca 380 ||| || | |||||||||||||||||||| ||||| || ||| ||| || |||| | | Sbjct: 79 cctgacgcagcagctgcacctgccgctggtggaggcgtccaacacgctgaccaacttcaa 138 Query: 381 cggcacgaccaacctcacgccgctcgtcggcggcctcatcgctgactccttcgcgggccg 440 ||||||| ||| |||||| ||| || | |||| ||| ||| ||| ||||||| ||||| Sbjct: 139 cggcacgtccagcctcaccccgatcctgggcgcgctcgccgccgacgccttcgccggccg 198 Query: 441 cttctggaccatcaccgtcggctccatcatctaccagctcggcatg 486 |||||||||||||| || ||| ||| || ||||||||||||||||| Sbjct: 199 cttctggaccatcatcgccggatccgtcttctaccagctcggcatg 244 Score = 73.8 bits (37), Expect = 2e-09 Identities = 61/69 (88%) Strand = Plus / Plus Query: 784 gtggtggtgtacatccaggagaacgtcggctgggggtgggggctcggcgtgcccaccatc 843 |||||||||||||||||||||||||| || |||||||||||| |||| | || ||||| Sbjct: 563 gtggtggtgtacatccaggagaacgtggggtgggggtgggggttcgggatcccggccatc 622 Query: 844 gccatgttc 852 ||||||||| Sbjct: 623 gccatgttc 631 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 601 ctgctctgcacgtccatcggctccgggggcacgcgcccctgcaacatggcgttcggcgcc 660 ||||||||||||||| |||||||||| |||| ||||||||| |||||||||||||| Sbjct: 365 ctgctctgcacgtccctcggctccggcggcatccgcccctgcgtggtggcgttcggcgcc 424 Query: 661 gaccagctcga 671 |||||| |||| Sbjct: 425 gaccagttcga 435 Score = 67.9 bits (34), Expect = 1e-07 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1541 tgcccatcagtgtcttctggctggtgccgcagtacgccatccacgg 1586 |||||||||| || |||||||||||||||||||||||| ||||||| Sbjct: 1320 tgcccatcagcgtgttctggctggtgccgcagtacgccgtccacgg 1365 Score = 58.0 bits (29), Expect = 1e-04 Identities = 68/81 (83%) Strand = Plus / Plus Query: 991 ctgtacgaggacaagaagctcgacgccggcatctccaccaccggccgtcttctccacacc 1050 |||||| |||||||| |||||||||| ||||||||||| ||| | || |||||||| Sbjct: 773 ctgtaccaggacaaggagctcgacgcgctcatctccaccaatggcaggctgctccacaca 832 Query: 1051 aaccagctaaagttctttgac 1071 |||||||| | |||||||||| Sbjct: 833 aaccagctcacgttctttgac 853 Score = 54.0 bits (27), Expect = 0.002 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1617 catggagtttttgtacgaccaggcgcccgagagcatgaggagcactgcggcggcgctcta 1676 ||||||||| |||||||||||||||| ||||||||| | |||| || || ||||||| Sbjct: 1396 catggagttcctgtacgaccaggcgccggagagcatgcgcagcagcgccgccgcgctctt 1455 Query: 1677 ctggctc 1683 ||||||| Sbjct: 1456 ctggctc 1462
>dbj|AK110441.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-D04, full insert sequence Length = 2048 Score = 131 bits (66), Expect = 1e-26 Identities = 138/162 (85%) Strand = Plus / Plus Query: 1108 tccggcgagccgaagctgtggcggttgtcgacggtgcaccgggtggaagagatcaagtcg 1167 |||||||||||| | ||||||||| ||||| |||||||||| ||||| ||| ||||||| Sbjct: 890 tccggcgagccggacctgtggcggctgtcggcggtgcaccgcgtggaggagctcaagtcc 949 Query: 1168 attgtccggatgctgcccatctgggcggcgggcatcctcatggtgaccgcgtcgtcacac 1227 || |||||| |||||||||||||| |||| |||||||| | | ||||| |||| ||| Sbjct: 950 atcgtccggctgctgcccatctggtcggccggcatcctgctcgccaccgccgcgtcgcac 1009 Query: 1228 aacagcagcttcgcgatccagcaggcgcgcaccatggaccgc 1269 ||| ||| |||| | ||||||||||||||||||||||||||| Sbjct: 1010 aacggcaccttcaccatccagcaggcgcgcaccatggaccgc 1051 Score = 123 bits (62), Expect = 3e-24 Identities = 185/226 (81%) Strand = Plus / Plus Query: 261 agcgaacgacttctgcgaccggctggcgacggtggggttcgggtcgaacctgatctccta 320 ||||||||| ||||||||||| | || |||| ||||||||| ||||||||||| | || Sbjct: 19 agcgaacgagatctgcgaccggttcgccacggcggggttcggcgcgaacctgatcacgta 78 Query: 321 cctcaccctccagctgcacctgccgctggtcgaggcctctaacgtgctcacgaactacca 380 ||| || | |||||||||||||||||||| ||||| || ||| ||| || |||| | | Sbjct: 79 cctgacgcagcagctgcacctgccgctggtggaggcgtccaacacgctgaccaacttcaa 138 Query: 381 cggcacgaccaacctcacgccgctcgtcggcggcctcatcgctgactccttcgcgggccg 440 ||||||| ||| |||||| ||| || | |||| ||| ||| ||| ||||||| ||||| Sbjct: 139 cggcacgtccagcctcaccccgatcctgggcgcgctcgccgccgacgccttcgccggccg 198 Query: 441 cttctggaccatcaccgtcggctccatcatctaccagctcggcatg 486 |||||||||||||| || ||| ||| || ||||||||||||||||| Sbjct: 199 cttctggaccatcatcgccggatccgtcttctaccagctcggcatg 244 Score = 73.8 bits (37), Expect = 2e-09 Identities = 61/69 (88%) Strand = Plus / Plus Query: 784 gtggtggtgtacatccaggagaacgtcggctgggggtgggggctcggcgtgcccaccatc 843 |||||||||||||||||||||||||| || |||||||||||| |||| | || ||||| Sbjct: 563 gtggtggtgtacatccaggagaacgtggggtgggggtgggggttcgggatcccggccatc 622 Query: 844 gccatgttc 852 ||||||||| Sbjct: 623 gccatgttc 631 Score = 67.9 bits (34), Expect = 1e-07 Identities = 43/46 (93%) Strand = Plus / Plus Query: 1541 tgcccatcagtgtcttctggctggtgccgcagtacgccatccacgg 1586 |||||||||| || |||||||||||||||||||||||| ||||||| Sbjct: 1320 tgcccatcagcgtgttctggctggtgccgcagtacgccgtccacgg 1365 Score = 61.9 bits (31), Expect = 9e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 601 ctgctctgcacgtccatcggctccgggggcacgcgcccctgcaacatggcgttcggcgcc 660 ||||||||||||||| |||||||||| |||| ||||||||| |||||||||||||| Sbjct: 365 ctgctctgcacgtccctcggctccggcggcatccgcccctgcgtggtggcgttcggcgcc 424 Query: 661 gaccagctcga 671 | |||| |||| Sbjct: 425 gtccagttcga 435 Score = 58.0 bits (29), Expect = 1e-04 Identities = 68/81 (83%) Strand = Plus / Plus Query: 991 ctgtacgaggacaagaagctcgacgccggcatctccaccaccggccgtcttctccacacc 1050 |||||| |||||||| |||||||||| ||||||||||| ||| | || |||||||| Sbjct: 773 ctgtaccaggacaaggagctcgacgcgctcatctccaccaatggcaggctgctccacaca 832 Query: 1051 aaccagctaaagttctttgac 1071 |||||||| | |||||||||| Sbjct: 833 aaccagctcacgttctttgac 853 Score = 54.0 bits (27), Expect = 0.002 Identities = 57/67 (85%) Strand = Plus / Plus Query: 1617 catggagtttttgtacgaccaggcgcccgagagcatgaggagcactgcggcggcgctcta 1676 ||||||||| |||||||||||||||| ||||||||| | |||| || || ||||||| Sbjct: 1396 catggagttcctgtacgaccaggcgccggagagcatgcgcagcagcgccgccgcgctctt 1455 Query: 1677 ctggctc 1683 ||||||| Sbjct: 1456 ctggctc 1462
>ref|NM_001063870.1| Oryza sativa (japonica cultivar-group) Os06g0264500 (Os06g0264500) mRNA, complete cds Length = 1997 Score = 67.9 bits (34), Expect = 1e-07 Identities = 130/162 (80%) Strand = Plus / Plus Query: 1557 ctggctggtgccgcagtacgccatccacggtatcgccgacgcattcatggacgtcggccg 1616 ||||||||||||||||||||| ||||||| || || || ||||||| ||| || | Sbjct: 1399 ctggctggtgccgcagtacgcgctccacggcatggcggaggcattcaactccgtgggtca 1458 Query: 1617 catggagtttttgtacgaccaggcgcccgagagcatgaggagcactgcggcggcgctcta 1676 | | ||||| ||||||||||| |||| ||||||||| |||||| ||| ||||||| | Sbjct: 1459 cctcgagttcatgtacgaccagtcgccagagagcatgcggagcatggcgacggcgctgtt 1518 Query: 1677 ctggctcaccatctcggcggggagctacctcggcacgctgct 1718 |||||| |||||||| |||||||||| || ||||| |||| Sbjct: 1519 ctggctgtccatctcgctggggagctacgtcagcacgatgct 1560 Score = 61.9 bits (31), Expect = 9e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 400 ccgctcgtcggcggcctcatcgctgactccttcgcgggccgcttctggaccatcaccgtc 459 |||||| |||||| | || |||| |||||| ||| |||||||||||||||||| ||| | Sbjct: 224 ccgctcatcggcgccttcctcgccgactccctcgtcggccgcttctggaccatcgccgcc 283 Query: 460 ggctccatcatctaccagctcggcatg 486 | |||| |||||||||| |||||||| Sbjct: 284 gcctccctcatctaccaagtcggcatg 310 Score = 61.9 bits (31), Expect = 9e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 786 ggtggtgtacatccaggagaacgtcggctgggggtgggggctcggcgtgcccacc 840 |||||||||| | ||||| |||||||||||||| ||||| ||||| ||||||||| Sbjct: 595 ggtggtgtacgtgcaggacaacgtcggctggggctggggcctcggtgtgcccacc 649 Score = 42.1 bits (21), Expect = 8.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 647 tggcgttcggcgccgaccagctcga 671 |||||||||||||||||||| |||| Sbjct: 477 tggcgttcggcgccgaccagttcga 501
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 67.9 bits (34), Expect = 1e-07 Identities = 130/162 (80%) Strand = Plus / Plus Query: 1557 ctggctggtgccgcagtacgccatccacggtatcgccgacgcattcatggacgtcggccg 1616 ||||||||||||||||||||| ||||||| || || || ||||||| ||| || | Sbjct: 8754241 ctggctggtgccgcagtacgcgctccacggcatggcggaggcattcaactccgtgggtca 8754300 Query: 1617 catggagtttttgtacgaccaggcgcccgagagcatgaggagcactgcggcggcgctcta 1676 | | ||||| ||||||||||| |||| ||||||||| |||||| ||| ||||||| | Sbjct: 8754301 cctcgagttcatgtacgaccagtcgccagagagcatgcggagcatggcgacggcgctgtt 8754360 Query: 1677 ctggctcaccatctcggcggggagctacctcggcacgctgct 1718 |||||| |||||||| |||||||||| || ||||| |||| Sbjct: 8754361 ctggctgtccatctcgctggggagctacgtcagcacgatgct 8754402 Score = 61.9 bits (31), Expect = 9e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 786 ggtggtgtacatccaggagaacgtcggctgggggtgggggctcggcgtgcccacc 840 |||||||||| | ||||| |||||||||||||| ||||| ||||| ||||||||| Sbjct: 8751030 ggtggtgtacgtgcaggacaacgtcggctggggctggggcctcggtgtgcccacc 8751084 Score = 58.0 bits (29), Expect = 1e-04 Identities = 65/77 (84%) Strand = Plus / Plus Query: 400 ccgctcgtcggcggcctcatcgctgactccttcgcgggccgcttctggaccatcaccgtc 459 |||||| |||||| | || |||| |||||| ||| |||||||||||||||||| ||| | Sbjct: 8750569 ccgctcatcggcgccttcctcgccgactccctcgtcggccgcttctggaccatcgccgcc 8750628 Query: 460 ggctccatcatctacca 476 | |||| |||||||||| Sbjct: 8750629 gcctccctcatctacca 8750645 Score = 42.1 bits (21), Expect = 8.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 647 tggcgttcggcgccgaccagctcga 671 |||||||||||||||||||| |||| Sbjct: 8750912 tggcgttcggcgccgaccagttcga 8750936
>dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1001_B06 Length = 134810 Score = 67.9 bits (34), Expect = 1e-07 Identities = 130/162 (80%) Strand = Plus / Plus Query: 1557 ctggctggtgccgcagtacgccatccacggtatcgccgacgcattcatggacgtcggccg 1616 ||||||||||||||||||||| ||||||| || || || ||||||| ||| || | Sbjct: 24562 ctggctggtgccgcagtacgcgctccacggcatggcggaggcattcaactccgtgggtca 24621 Query: 1617 catggagtttttgtacgaccaggcgcccgagagcatgaggagcactgcggcggcgctcta 1676 | | ||||| ||||||||||| |||| ||||||||| |||||| ||| ||||||| | Sbjct: 24622 cctcgagttcatgtacgaccagtcgccagagagcatgcggagcatggcgacggcgctgtt 24681 Query: 1677 ctggctcaccatctcggcggggagctacctcggcacgctgct 1718 |||||| |||||||| |||||||||| || ||||| |||| Sbjct: 24682 ctggctgtccatctcgctggggagctacgtcagcacgatgct 24723 Score = 61.9 bits (31), Expect = 9e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 786 ggtggtgtacatccaggagaacgtcggctgggggtgggggctcggcgtgcccacc 840 |||||||||| | ||||| |||||||||||||| ||||| ||||| ||||||||| Sbjct: 21351 ggtggtgtacgtgcaggacaacgtcggctggggctggggcctcggtgtgcccacc 21405 Score = 58.0 bits (29), Expect = 1e-04 Identities = 65/77 (84%) Strand = Plus / Plus Query: 400 ccgctcgtcggcggcctcatcgctgactccttcgcgggccgcttctggaccatcaccgtc 459 |||||| |||||| | || |||| |||||| ||| |||||||||||||||||| ||| | Sbjct: 20890 ccgctcatcggcgccttcctcgccgactccctcgtcggccgcttctggaccatcgccgcc 20949 Query: 460 ggctccatcatctacca 476 | |||| |||||||||| Sbjct: 20950 gcctccctcatctacca 20966 Score = 42.1 bits (21), Expect = 8.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 647 tggcgttcggcgccgaccagctcga 671 |||||||||||||||||||| |||| Sbjct: 21233 tggcgttcggcgccgaccagttcga 21257
>dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0037N01 Length = 174085 Score = 67.9 bits (34), Expect = 1e-07 Identities = 130/162 (80%) Strand = Plus / Plus Query: 1557 ctggctggtgccgcagtacgccatccacggtatcgccgacgcattcatggacgtcggccg 1616 ||||||||||||||||||||| ||||||| || || || ||||||| ||| || | Sbjct: 169223 ctggctggtgccgcagtacgcgctccacggcatggcggaggcattcaactccgtgggtca 169282 Query: 1617 catggagtttttgtacgaccaggcgcccgagagcatgaggagcactgcggcggcgctcta 1676 | | ||||| ||||||||||| |||| ||||||||| |||||| ||| ||||||| | Sbjct: 169283 cctcgagttcatgtacgaccagtcgccagagagcatgcggagcatggcgacggcgctgtt 169342 Query: 1677 ctggctcaccatctcggcggggagctacctcggcacgctgct 1718 |||||| |||||||| |||||||||| || ||||| |||| Sbjct: 169343 ctggctgtccatctcgctggggagctacgtcagcacgatgct 169384 Score = 61.9 bits (31), Expect = 9e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 786 ggtggtgtacatccaggagaacgtcggctgggggtgggggctcggcgtgcccacc 840 |||||||||| | ||||| |||||||||||||| ||||| ||||| ||||||||| Sbjct: 166012 ggtggtgtacgtgcaggacaacgtcggctggggctggggcctcggtgtgcccacc 166066 Score = 58.0 bits (29), Expect = 1e-04 Identities = 65/77 (84%) Strand = Plus / Plus Query: 400 ccgctcgtcggcggcctcatcgctgactccttcgcgggccgcttctggaccatcaccgtc 459 |||||| |||||| | || |||| |||||| ||| |||||||||||||||||| ||| | Sbjct: 165551 ccgctcatcggcgccttcctcgccgactccctcgtcggccgcttctggaccatcgccgcc 165610 Query: 460 ggctccatcatctacca 476 | |||| |||||||||| Sbjct: 165611 gcctccctcatctacca 165627 Score = 42.1 bits (21), Expect = 8.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 647 tggcgttcggcgccgaccagctcga 671 |||||||||||||||||||| |||| Sbjct: 165894 tggcgttcggcgccgaccagttcga 165918
>dbj|AK120596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013148A07, full insert sequence Length = 1998 Score = 67.9 bits (34), Expect = 1e-07 Identities = 130/162 (80%) Strand = Plus / Plus Query: 1557 ctggctggtgccgcagtacgccatccacggtatcgccgacgcattcatggacgtcggccg 1616 ||||||||||||||||||||| ||||||| || || || ||||||| ||| || | Sbjct: 1400 ctggctggtgccgcagtacgcgctccacggcatggcggaggcattcaactccgtgggtca 1459 Query: 1617 catggagtttttgtacgaccaggcgcccgagagcatgaggagcactgcggcggcgctcta 1676 | | ||||| ||||||||||| |||| ||||||||| |||||| ||| ||||||| | Sbjct: 1460 cctcgagttcatgtacgaccagtcgccagagagcatgcggagcatggcgacggcgctgtt 1519 Query: 1677 ctggctcaccatctcggcggggagctacctcggcacgctgct 1718 |||||| |||||||| |||||||||| || ||||| |||| Sbjct: 1520 ctggctgtccatctcgctggggagctacgtcagcacgatgct 1561 Score = 61.9 bits (31), Expect = 9e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 400 ccgctcgtcggcggcctcatcgctgactccttcgcgggccgcttctggaccatcaccgtc 459 |||||| |||||| | || |||| |||||| ||| |||||||||||||||||| ||| | Sbjct: 225 ccgctcatcggcgccttcctcgccgactccctcgtcggccgcttctggaccatcgccgcc 284 Query: 460 ggctccatcatctaccagctcggcatg 486 | |||| |||||||||| |||||||| Sbjct: 285 gcctccctcatctaccaagtcggcatg 311 Score = 61.9 bits (31), Expect = 9e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 786 ggtggtgtacatccaggagaacgtcggctgggggtgggggctcggcgtgcccacc 840 |||||||||| | ||||| |||||||||||||| ||||| ||||| ||||||||| Sbjct: 596 ggtggtgtacgtgcaggacaacgtcggctggggctggggcctcggtgtgcccacc 650 Score = 42.1 bits (21), Expect = 8.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 647 tggcgttcggcgccgaccagctcga 671 |||||||||||||||||||| |||| Sbjct: 478 tggcgttcggcgccgaccagttcga 502
>ref|NM_001062069.1| Oryza sativa (japonica cultivar-group) Os05g0410800 (Os05g0410800) mRNA, complete cds Length = 737 Score = 63.9 bits (32), Expect = 2e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 1757 agtggctacaggacaacctcaacagagggaagctggataactactactggctcgtc 1812 ||||||| ||||||||| ||||||| |||| |||||| ||||||||||||||||| Sbjct: 432 agtggctccaggacaacatcaacagggggaggctggactactactactggctcgtc 487 Score = 50.1 bits (25), Expect = 0.033 Identities = 49/57 (85%) Strand = Plus / Plus Query: 1617 catggagtttttgtacgaccaggcgcccgagagcatgaggagcactgcggcggcgct 1673 ||||||||| | ||||||||| |||| ||||||||| ||||| | ||||||||||| Sbjct: 298 catggagttcctctacgaccagtcgccggagagcatgcggagctcggcggcggcgct 354
>dbj|AK108312.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-G01, full insert sequence Length = 737 Score = 63.9 bits (32), Expect = 2e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 1757 agtggctacaggacaacctcaacagagggaagctggataactactactggctcgtc 1812 ||||||| ||||||||| ||||||| |||| |||||| ||||||||||||||||| Sbjct: 432 agtggctccaggacaacatcaacagggggaggctggactactactactggctcgtc 487 Score = 50.1 bits (25), Expect = 0.033 Identities = 49/57 (85%) Strand = Plus / Plus Query: 1617 catggagtttttgtacgaccaggcgcccgagagcatgaggagcactgcggcggcgct 1673 ||||||||| | ||||||||| |||| ||||||||| ||||| | ||||||||||| Sbjct: 298 catggagttcctctacgaccagtcgccggagagcatgcggagctcggcggcggcgct 354
>emb|CT834146.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN007K09, full insert sequence Length = 1492 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 775 gcggtcaccgtggtggtgtacatccaggagaacgtcggctgggggtgggg 824 |||||||||||| |||||||| ||||||| ||||||||| |||| ||||| Sbjct: 737 gcggtcaccgtgctggtgtacgtccaggacaacgtcggccggggctgggg 786
>ref|NM_001053775.1| Oryza sativa (japonica cultivar-group) Os02g0580900 (Os02g0580900) mRNA, complete cds Length = 2205 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 775 gcggtcaccgtggtggtgtacatccaggagaacgtcggctgggggtgggg 824 |||||||||||| |||||||| ||||||| ||||||||| |||| ||||| Sbjct: 735 gcggtcaccgtgctggtgtacgtccaggacaacgtcggccggggctgggg 784
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 775 gcggtcaccgtggtggtgtacatccaggagaacgtcggctgggggtgggg 824 |||||||||||| |||||||| ||||||| ||||||||| |||| ||||| Sbjct: 22392629 gcggtcaccgtgctggtgtacgtccaggacaacgtcggccggggctgggg 22392580 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 517 tcgctccgcccgccgccgtgc 537 ||||||||||||||||||||| Sbjct: 20387257 tcgctccgcccgccgccgtgc 20387237
>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1267B06 Length = 156989 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 775 gcggtcaccgtggtggtgtacatccaggagaacgtcggctgggggtgggg 824 |||||||||||| |||||||| ||||||| ||||||||| |||| ||||| Sbjct: 151273 gcggtcaccgtgctggtgtacgtccaggacaacgtcggccggggctgggg 151224
>dbj|AP003999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_A05 Length = 113326 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 775 gcggtcaccgtggtggtgtacatccaggagaacgtcggctgggggtgggg 824 |||||||||||| |||||||| ||||||| ||||||||| |||| ||||| Sbjct: 48848 gcggtcaccgtgctggtgtacgtccaggacaacgtcggccggggctgggg 48799
>dbj|AK120486.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013113P19, full insert sequence Length = 2206 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 775 gcggtcaccgtggtggtgtacatccaggagaacgtcggctgggggtgggg 824 |||||||||||| |||||||| ||||||| ||||||||| |||| ||||| Sbjct: 736 gcggtcaccgtgctggtgtacgtccaggacaacgtcggccggggctgggg 785
>emb|Z69370.2|CSNITR1 Cucumis sativus mRNA for nitrite transporter (NiTR1 gene) Length = 1916 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 439 cgcttctggaccatcaccgtcggctccatcatctaccagctcggcatggt 488 |||||||||||||||||| ||| |||||||||||| ||||||| ||||| Sbjct: 334 cgcttctggaccatcaccatcgcctccatcatctatgagctcggaatggt 383 Score = 50.1 bits (25), Expect = 0.033 Identities = 58/69 (84%) Strand = Plus / Plus Query: 781 accgtggtggtgtacatccaggagaacgtcggctgggggtgggggctcggcgtgcccacc 840 |||||||||||||| || || || ||||| || |||||||||||| ||||| | || ||| Sbjct: 652 accgtggtggtgtatattcaagacaacgtggggtgggggtgggggttcggccttccgacc 711 Query: 841 atcgccatg 849 || |||||| Sbjct: 712 atagccatg 720
>dbj|AK242252.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075182G16, full insert sequence Length = 2089 Score = 58.0 bits (29), Expect = 1e-04 Identities = 50/57 (87%) Strand = Plus / Plus Query: 1378 cgccgcttcaccggccgccccaacggcatcacccacctccagcgcgccggcgtcggc 1434 |||||| ||||||||| ||||||||||||| | ||||| ||||| | |||||||||| Sbjct: 1318 cgccgcatcaccggccaccccaacggcatcccgcacctgcagcgggtcggcgtcggc 1374
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 58.0 bits (29), Expect = 1e-04 Identities = 50/57 (87%) Strand = Plus / Plus Query: 1378 cgccgcttcaccggccgccccaacggcatcacccacctccagcgcgccggcgtcggc 1434 |||||| ||||||||| ||||||||||||| | ||||| ||||| | |||||||||| Sbjct: 31351435 cgccgcatcaccggccaccccaacggcatcccgcacctgcagcgggtcggcgtcggc 31351491 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1701 ctacctcggcacgctgctggtgaccatcgt 1730 ||||||| |||||||||| ||||||||||| Sbjct: 2296739 ctacctcagcacgctgctcgtgaccatcgt 2296768 Score = 44.1 bits (22), Expect = 2.0 Identities = 31/34 (91%) Strand = Plus / Minus Query: 505 gccgcgctcccctcgctccgcccgccgccgtgcc 538 ||||||||||| ||||| | |||||||||||||| Sbjct: 42357910 gccgcgctcccgtcgctactcccgccgccgtgcc 42357877 Score = 42.1 bits (21), Expect = 8.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1414 ctccagcgcgccggcgtcggcatgaccat 1442 |||||||||| ||||||||||||| |||| Sbjct: 37809396 ctccagcgcgtcggcgtcggcatggccat 37809424 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1558 tggctggtgccgcagtacgcc 1578 ||||||||||||||||||||| Sbjct: 37809537 tggctggtgccgcagtacgcc 37809557 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1558 tggctggtgccgcagtacgcc 1578 ||||||||||||||||||||| Sbjct: 37819687 tggctggtgccgcagtacgcc 37819707 Score = 42.1 bits (21), Expect = 8.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1618 atggagtttttgtacgaccaggcgcccga 1646 |||||||| || ||||||||||||||||| Sbjct: 39303282 atggagttcttctacgaccaggcgcccga 39303310
>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0481E12 Length = 161563 Score = 58.0 bits (29), Expect = 1e-04 Identities = 50/57 (87%) Strand = Plus / Plus Query: 1378 cgccgcttcaccggccgccccaacggcatcacccacctccagcgcgccggcgtcggc 1434 |||||| ||||||||| ||||||||||||| | ||||| ||||| | |||||||||| Sbjct: 105718 cgccgcatcaccggccaccccaacggcatcccgcacctgcagcgggtcggcgtcggc 105774
>ref|NM_001061770.1| Oryza sativa (japonica cultivar-group) Os05g0336200 (Os05g0336200) mRNA, complete cds Length = 948 Score = 48.1 bits (24), Expect = 0.13 Identities = 36/40 (90%) Strand = Plus / Plus Query: 436 ggccgcttctggaccatcaccgtcggctccatcatctacc 475 ||||||||||||||| |||||||| |||| ||||||||| Sbjct: 193 ggccgcttctggaccttcaccgtctcctccctcatctacc 232
>emb|AM260479.1| Ralstonia eutropha H16 chromosome 1 Length = 4052032 Score = 48.1 bits (24), Expect = 0.13 Identities = 30/32 (93%) Strand = Plus / Minus Query: 1423 gccggcgtcggcatgaccatcgccatgctggc 1454 ||||||||||||| |||| ||||||||||||| Sbjct: 2808840 gccggcgtcggcaagaccttcgccatgctggc 2808809 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1417 cagcgcgccggcgtcggcatg 1437 ||||||||||||||||||||| Sbjct: 149685 cagcgcgccggcgtcggcatg 149665
>gb|AC079685.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0012A20, complete sequence Length = 131599 Score = 48.1 bits (24), Expect = 0.13 Identities = 36/40 (90%) Strand = Plus / Plus Query: 393 cctcacgccgctcgtcggcggcctcatcgctgactccttc 432 |||||||||||||||||||| ||||||| ||||||||| Sbjct: 96887 cctcacgccgctcgtcggcgcattcatcgccgactccttc 96926
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 48.1 bits (24), Expect = 0.13 Identities = 36/40 (90%) Strand = Plus / Plus Query: 393 cctcacgccgctcgtcggcggcctcatcgctgactccttc 432 |||||||||||||||||||| ||||||| ||||||||| Sbjct: 816030 cctcacgccgctcgtcggcgcattcatcgccgactccttc 816069
>gb|AC098694.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1014H12, complete sequence Length = 129420 Score = 48.1 bits (24), Expect = 0.13 Identities = 36/40 (90%) Strand = Plus / Minus Query: 393 cctcacgccgctcgtcggcggcctcatcgctgactccttc 432 |||||||||||||||||||| ||||||| ||||||||| Sbjct: 120152 cctcacgccgctcgtcggcgcattcatcgccgactccttc 120113
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 48.1 bits (24), Expect = 0.13 Identities = 36/40 (90%) Strand = Plus / Plus Query: 393 cctcacgccgctcgtcggcggcctcatcgctgactccttc 432 |||||||||||||||||||| ||||||| ||||||||| Sbjct: 816030 cctcacgccgctcgtcggcgcattcatcgccgactccttc 816069 Score = 46.1 bits (23), Expect = 0.51 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1621 gagtttttgtacgaccaggcgcccgagagcatgaggagc 1659 ||||| || |||||||||||||| |||||||||| |||| Sbjct: 16863474 gagttcttctacgaccaggcgccggagagcatgaagagc 16863512 Score = 42.1 bits (21), Expect = 8.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 648 ggcgttcggcgccgaccagctcgag 672 ||||||||||||||||||| ||||| Sbjct: 2893083 ggcgttcggcgccgaccagttcgag 2893059
>gb|AC144739.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0049D13, complete sequence Length = 136942 Score = 48.1 bits (24), Expect = 0.13 Identities = 36/40 (90%) Strand = Plus / Minus Query: 436 ggccgcttctggaccatcaccgtcggctccatcatctacc 475 ||||||||||||||| |||||||| |||| ||||||||| Sbjct: 119898 ggccgcttctggaccttcaccgtctcctccctcatctacc 119859 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 797 tccaggagaacgtcggctgggg 818 |||||||||||||||||||||| Sbjct: 101584 tccaggagaacgtcggctgggg 101563
>ref|NM_001073910.1| Oryza sativa (japonica cultivar-group) Os12g0638300 (Os12g0638300) mRNA, complete cds Length = 1986 Score = 46.1 bits (23), Expect = 0.51 Identities = 47/55 (85%) Strand = Plus / Plus Query: 617 tcggctccgggggcacgcgcccctgcaacatggcgttcggcgccgaccagctcga 671 ||||| |||| |||| |||||||||||| | || ||||||||||||||| |||| Sbjct: 571 tcggcgccggcggcatccgcccctgcaacctcgccttcggcgccgaccagttcga 625
>ref|NM_001073909.1| Oryza sativa (japonica cultivar-group) Os12g0638200 (Os12g0638200) mRNA, complete cds Length = 2074 Score = 46.1 bits (23), Expect = 0.51 Identities = 47/55 (85%) Strand = Plus / Plus Query: 617 tcggctccgggggcacgcgcccctgcaacatggcgttcggcgccgaccagctcga 671 ||||| |||| |||| |||||||||||| | || ||||||||||||||| |||| Sbjct: 596 tcggcgccggcggcatccgcccctgcaacctcgccttcggcgccgaccagttcga 650
>ref|NM_001071356.1| Oryza sativa (japonica cultivar-group) Os10g0469900 (Os10g0469900) mRNA, complete cds Length = 2061 Score = 46.1 bits (23), Expect = 0.51 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1621 gagtttttgtacgaccaggcgcccgagagcatgaggagc 1659 ||||| || |||||||||||||| |||||||||| |||| Sbjct: 1547 gagttcttctacgaccaggcgccggagagcatgaagagc 1585
>ref|NM_001055445.1| Oryza sativa (japonica cultivar-group) Os03g0138700 (Os03g0138700) mRNA, complete cds Length = 2218 Score = 46.1 bits (23), Expect = 0.51 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1621 gagtttttgtacgaccaggcgcccgagagcatgaggagc 1659 ||||| || |||||||||||||| |||||||||| |||| Sbjct: 1582 gagttcttctacgaccaggcgccggagagcatgaagagc 1620
>gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0003A09, complete sequence Length = 167222 Score = 46.1 bits (23), Expect = 0.51 Identities = 35/39 (89%) Strand = Plus / Minus Query: 1621 gagtttttgtacgaccaggcgcccgagagcatgaggagc 1659 ||||| || |||||||||||||| |||||||||| |||| Sbjct: 151816 gagttcttctacgaccaggcgccggagagcatgaagagc 151778
>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030C11, complete sequence Length = 156647 Score = 46.1 bits (23), Expect = 0.51 Identities = 35/39 (89%) Strand = Plus / Minus Query: 1621 gagtttttgtacgaccaggcgcccgagagcatgaggagc 1659 ||||| || |||||||||||||| |||||||||| |||| Sbjct: 4687 gagttcttctacgaccaggcgccggagagcatgaagagc 4649
>gb|BT009242.1| Triticum aestivum clone wlk1.pk0013.f1:fis, full insert mRNA sequence Length = 1993 Score = 46.1 bits (23), Expect = 0.51 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1621 gagtttttgtacgaccaggcgcccgagagcatgaggagc 1659 ||||| || |||||||||||||||||| |||||| |||| Sbjct: 1527 gagttcttctacgaccaggcgcccgagggcatgaagagc 1565
>emb|AL591783.1|SME591783 Sinorhizobium meliloti 1021 complete chromosome; segment 2/12 Length = 306650 Score = 46.1 bits (23), Expect = 0.51 Identities = 23/23 (100%) Strand = Plus / Plus Query: 583 gccatcctctacctgtcgctgct 605 ||||||||||||||||||||||| Sbjct: 112635 gccatcctctacctgtcgctgct 112657
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 46.1 bits (23), Expect = 0.51 Identities = 47/55 (85%) Strand = Plus / Minus Query: 617 tcggctccgggggcacgcgcccctgcaacatggcgttcggcgccgaccagctcga 671 ||||| |||| |||| |||||||||||| | || ||||||||||||||| |||| Sbjct: 27383927 tcggcgccggcggcatccgcccctgcaacctcgccttcggcgccgaccagttcga 27383873 Score = 46.1 bits (23), Expect = 0.51 Identities = 47/55 (85%) Strand = Plus / Minus Query: 617 tcggctccgggggcacgcgcccctgcaacatggcgttcggcgccgaccagctcga 671 ||||| |||| |||| |||||||||||| | || ||||||||||||||| |||| Sbjct: 27397021 tcggcgccggcggcatccgcccctgcaacctcgccttcggcgccgaccagttcga 27396967 Score = 44.1 bits (22), Expect = 2.0 Identities = 37/42 (88%) Strand = Plus / Minus Query: 421 gctgactccttcgcgggccgcttctggaccatcaccgtcggc 462 ||||| |||||||| |||||| ||||||||||| ||| |||| Sbjct: 19392262 gctgattccttcgccggccgcctctggaccatcgccgccggc 19392221
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 46.1 bits (23), Expect = 0.51 Identities = 23/23 (100%) Strand = Plus / Minus Query: 498 cctctccgccgcgctcccctcgc 520 ||||||||||||||||||||||| Sbjct: 15323808 cctctccgccgcgctcccctcgc 15323786 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 797 tccaggagaacgtcggctgggg 818 |||||||||||||||||||||| Sbjct: 26263222 tccaggagaacgtcggctgggg 26263201
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 46.1 bits (23), Expect = 0.51 Identities = 35/39 (89%) Strand = Plus / Minus Query: 1621 gagtttttgtacgaccaggcgcccgagagcatgaggagc 1659 ||||| || |||||||||||||| |||||||||| |||| Sbjct: 2114405 gagttcttctacgaccaggcgccggagagcatgaagagc 2114367
>dbj|AP005491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0062G05 Length = 152802 Score = 46.1 bits (23), Expect = 0.51 Identities = 23/23 (100%) Strand = Plus / Minus Query: 498 cctctccgccgcgctcccctcgc 520 ||||||||||||||||||||||| Sbjct: 109439 cctctccgccgcgctcccctcgc 109417
>gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079L16 genomic sequence, complete sequence Length = 147452 Score = 46.1 bits (23), Expect = 0.51 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1621 gagtttttgtacgaccaggcgcccgagagcatgaggagc 1659 ||||| || |||||||||||||| |||||||||| |||| Sbjct: 47926 gagttcttctacgaccaggcgccggagagcatgaagagc 47964
>dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1790_D02 Length = 162928 Score = 46.1 bits (23), Expect = 0.51 Identities = 23/23 (100%) Strand = Plus / Minus Query: 498 cctctccgccgcgctcccctcgc 520 ||||||||||||||||||||||| Sbjct: 9384 cctctccgccgcgctcccctcgc 9362
>dbj|AK105737.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-A02, full insert sequence Length = 2061 Score = 46.1 bits (23), Expect = 0.51 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1621 gagtttttgtacgaccaggcgcccgagagcatgaggagc 1659 ||||| || |||||||||||||| |||||||||| |||| Sbjct: 1547 gagttcttctacgaccaggcgccggagagcatgaagagc 1585
>dbj|AK101007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023148F24, full insert sequence Length = 1606 Score = 46.1 bits (23), Expect = 0.51 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1621 gagtttttgtacgaccaggcgcccgagagcatgaggagc 1659 ||||| || |||||||||||||| |||||||||| |||| Sbjct: 1101 gagttcttctacgaccaggcgccggagagcatgaagagc 1139
>dbj|AK072119.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123D02, full insert sequence Length = 2221 Score = 46.1 bits (23), Expect = 0.51 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1621 gagtttttgtacgaccaggcgcccgagagcatgaggagc 1659 ||||| || |||||||||||||| |||||||||| |||| Sbjct: 1584 gagttcttctacgaccaggcgccggagagcatgaagagc 1622
>dbj|AK068351.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136K21, full insert sequence Length = 2075 Score = 46.1 bits (23), Expect = 0.51 Identities = 47/55 (85%) Strand = Plus / Plus Query: 617 tcggctccgggggcacgcgcccctgcaacatggcgttcggcgccgaccagctcga 671 ||||| |||| |||| |||||||||||| | || ||||||||||||||| |||| Sbjct: 597 tcggcgccggcggcatccgcccctgcaacctcgccttcggcgccgaccagttcga 651
>dbj|AK068058.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132P13, full insert sequence Length = 1988 Score = 46.1 bits (23), Expect = 0.51 Identities = 47/55 (85%) Strand = Plus / Plus Query: 617 tcggctccgggggcacgcgcccctgcaacatggcgttcggcgccgaccagctcga 671 ||||| |||| |||| |||||||||||| | || ||||||||||||||| |||| Sbjct: 572 tcggcgccggcggcatccgcccctgcaacctcgccttcggcgccgaccagttcga 626
>dbj|AK059075.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-A04, full insert sequence Length = 2055 Score = 46.1 bits (23), Expect = 0.51 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1621 gagtttttgtacgaccaggcgcccgagagcatgaggagc 1659 ||||| || |||||||||||||| |||||||||| |||| Sbjct: 1547 gagttcttctacgaccaggcgccggagagcatgaagagc 1585
>gb|AY105791.1| Zea mays PCO061743 mRNA sequence Length = 1045 Score = 46.1 bits (23), Expect = 0.51 Identities = 35/39 (89%) Strand = Plus / Plus Query: 1621 gagtttttgtacgaccaggcgcccgagagcatgaggagc 1659 ||||| || |||||||||||||| |||||||||| |||| Sbjct: 573 gagttcttctacgaccaggcgccggagagcatgaagagc 611
>emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119_E02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124605 Score = 46.1 bits (23), Expect = 0.51 Identities = 47/55 (85%) Strand = Plus / Minus Query: 617 tcggctccgggggcacgcgcccctgcaacatggcgttcggcgccgaccagctcga 671 ||||| |||| |||| |||||||||||| | || ||||||||||||||| |||| Sbjct: 52247 tcggcgccggcggcatccgcccctgcaacctcgccttcggcgccgaccagttcga 52193 Score = 46.1 bits (23), Expect = 0.51 Identities = 47/55 (85%) Strand = Plus / Minus Query: 617 tcggctccgggggcacgcgcccctgcaacatggcgttcggcgccgaccagctcga 671 ||||| |||| |||| |||||||||||| | || ||||||||||||||| |||| Sbjct: 65341 tcggcgccggcggcatccgcccctgcaacctcgccttcggcgccgaccagttcga 65287
>ref|NM_001060893.1| Oryza sativa (japonica cultivar-group) Os04g0691400 (Os04g0691400) mRNA, complete cds Length = 1533 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 793 tacatccaggagaacgtcggctgggg 818 |||||||||||||||||| ||||||| Sbjct: 589 tacatccaggagaacgtcagctgggg 614
>ref|NM_001052004.1| Oryza sativa (japonica cultivar-group) Os01g0960900 (Os01g0960900) mRNA, complete cds Length = 1662 Score = 44.1 bits (22), Expect = 2.0 Identities = 31/34 (91%) Strand = Plus / Plus Query: 505 gccgcgctcccctcgctccgcccgccgccgtgcc 538 ||||||||||| ||||| | |||||||||||||| Sbjct: 253 gccgcgctcccgtcgctactcccgccgccgtgcc 286
>ref|NM_001048529.1| Oryza sativa (japonica cultivar-group) Os01g0142800 (Os01g0142800) mRNA, complete cds Length = 2306 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1701 ctacctcggcacgctgctggtgaccatcgt 1730 ||||||| |||||||||| ||||||||||| Sbjct: 1716 ctacctcagcacgctgctcgtgaccatcgt 1745
>gb|CP000158.1| Hyphomonas neptunium ATCC 15444, complete genome Length = 3705021 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1438 accatcgccatgctggcgaacg 1459 |||||||||||||||||||||| Sbjct: 2511080 accatcgccatgctggcgaacg 2511101
>gb|CP000447.1| Shewanella frigidimarina NCIMB 400, complete genome Length = 4845257 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1866 cacttttaagccactggagacg 1887 |||||||||||||||||||||| Sbjct: 307954 cacttttaagccactggagacg 307975
>gb|AF257324.2| Streptomyces galilaeus aclacinomycin biosynthesis gene cluster, partial sequence Length = 15155 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 822 ggggctcggcgtgcccaccatc 843 |||||||||||||||||||||| Sbjct: 1361 ggggctcggcgtgcccaccatc 1382
>dbj|AB254080.1| Streptomyces kanamyceticus kanamycin biosynthetic gene cluster, strain: NBRC 13414 Length = 205447 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 759 gctcgccaagctcgcggcggtcaccg 784 ||||||| |||||||||||||||||| Sbjct: 23245 gctcgccgagctcgcggcggtcaccg 23270
>emb|AL732342.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0518A01, complete sequence Length = 32686 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 793 tacatccaggagaacgtcggctgggg 818 |||||||||||||||||| ||||||| Sbjct: 29255 tacatccaggagaacgtcagctgggg 29280
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1187 tctgggcggcgggcatcctcat 1208 |||||||||||||||||||||| Sbjct: 833161 tctgggcggcgggcatcctcat 833140
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 793 tacatccaggagaacgtcggctgggg 818 |||||||||||||||||| ||||||| Sbjct: 35397545 tacatccaggagaacgtcagctgggg 35397570
>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0401G10 Length = 160704 Score = 44.1 bits (22), Expect = 2.0 Identities = 31/34 (91%) Strand = Plus / Minus Query: 505 gccgcgctcccctcgctccgcccgccgccgtgcc 538 ||||||||||| ||||| | |||||||||||||| Sbjct: 129867 gccgcgctcccgtcgctactcccgccgccgtgcc 129834
>dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483G10 Length = 190721 Score = 44.1 bits (22), Expect = 2.0 Identities = 31/34 (91%) Strand = Plus / Minus Query: 505 gccgcgctcccctcgctccgcccgccgccgtgcc 538 ||||||||||| ||||| | |||||||||||||| Sbjct: 17248 gccgcgctcccgtcgctactcccgccgccgtgcc 17215
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 188 agcgagccgaggatgccgccga 209 |||||||||||||||||||||| Sbjct: 106046 agcgagccgaggatgccgccga 106025
>emb|AL606656.3|OSJN00099 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020J19, complete sequence Length = 123272 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 793 tacatccaggagaacgtcggctgggg 818 |||||||||||||||||| ||||||| Sbjct: 22348 tacatccaggagaacgtcagctgggg 22373
>dbj|AP003311.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0024G09 Length = 175565 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1701 ctacctcggcacgctgctggtgaccatcgt 1730 ||||||| |||||||||| ||||||||||| Sbjct: 25789 ctacctcagcacgctgctcgtgaccatcgt 25818
>dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0019D06 Length = 167405 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1701 ctacctcggcacgctgctggtgaccatcgt 1730 ||||||| |||||||||| ||||||||||| Sbjct: 80323 ctacctcagcacgctgctcgtgaccatcgt 80352
>dbj|AP003857.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_E06 Length = 112241 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 797 tccaggagaacgtcggctgggg 818 |||||||||||||||||||||| Sbjct: 96147 tccaggagaacgtcggctgggg 96126
>dbj|AK105664.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-H07, full insert sequence Length = 2189 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1701 ctacctcggcacgctgctggtgaccatcgt 1730 ||||||| |||||||||| ||||||||||| Sbjct: 1716 ctacctcagcacgctgctcgtgaccatcgt 1745
>dbj|AK102216.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087L04, full insert sequence Length = 3090 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1701 ctacctcggcacgctgctggtgaccatcgt 1730 ||||||| |||||||||| ||||||||||| Sbjct: 2734 ctacctcagcacgctgctcgtgaccatcgt 2763
>dbj|AK070036.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036E09, full insert sequence Length = 2307 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1701 ctacctcggcacgctgctggtgaccatcgt 1730 ||||||| |||||||||| ||||||||||| Sbjct: 1717 ctacctcagcacgctgctcgtgaccatcgt 1746
>dbj|AK058745.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-H02, full insert sequence Length = 1984 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1701 ctacctcggcacgctgctggtgaccatcgt 1730 ||||||| |||||||||| ||||||||||| Sbjct: 1615 ctacctcagcacgctgctcgtgaccatcgt 1644
>dbj|AB008466.1| Streptomyces galilaeus aklavinone-aclacinomycin biosynthesis gene cluster, complete cds Length = 25883 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 822 ggggctcggcgtgcccaccatc 843 |||||||||||||||||||||| Sbjct: 5600 ggggctcggcgtgcccaccatc 5621
>gb|AY106418.1| Zea mays PCO154787 mRNA sequence Length = 2101 Score = 44.1 bits (22), Expect = 2.0 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1619 tggagtttttgtacgaccaggcgcccgagagcatgaggagca 1660 ||||||| || ||||||||||||||||| ||||||||||| Sbjct: 1643 tggagttcttctacgaccaggcgcccgacgccatgaggagca 1684
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 44.1 bits (22), Expect = 2.0 Identities = 31/34 (91%) Strand = Plus / Minus Query: 1421 gcgccggcgtcggcatgaccatcgccatgctggc 1454 ||||||||||||||| |||| |||||||||||| Sbjct: 1721917 gcgccggcgtcggcaagacctacgccatgctggc 1721884
>emb|BX119952.3|CNS09S4V Oryza sativa chromosome 12, . BAC OSJNBb0022A20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131975 Score = 44.1 bits (22), Expect = 2.0 Identities = 37/42 (88%) Strand = Plus / Minus Query: 421 gctgactccttcgcgggccgcttctggaccatcaccgtcggc 462 ||||| |||||||| |||||| ||||||||||| ||| |||| Sbjct: 97953 gctgattccttcgccggccgcctctggaccatcgccgccggc 97912
>emb|AL954828.3|CNS08CD4 Oryza sativa chromosome 12, . BAC OSJNBa0022M02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 163490 Score = 44.1 bits (22), Expect = 2.0 Identities = 37/42 (88%) Strand = Plus / Minus Query: 421 gctgactccttcgcgggccgcttctggaccatcaccgtcggc 462 ||||| |||||||| |||||| ||||||||||| ||| |||| Sbjct: 69956 gctgattccttcgccggccgcctctggaccatcgccgccggc 69915
>gb|EF064747.1| Homo sapiens class II, major histocompatibility complex, transactivator (CIITA) gene, complete cds Length = 51705 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1539 gttgcccatcagtgtcttctg 1559 ||||||||||||||||||||| Sbjct: 49341 gttgcccatcagtgtcttctg 49321
>dbj|AK242900.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090081K18, full insert sequence Length = 2036 Score = 42.1 bits (21), Expect = 8.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1618 atggagtttttgtacgaccaggcgcccga 1646 |||||||| || ||||||||||||||||| Sbjct: 1502 atggagttcttctacgaccaggcgcccga 1530
>ref|NM_001070700.1| Oryza sativa (japonica cultivar-group) Os10g0148400 (Os10g0148400) mRNA, complete cds Length = 1662 Score = 42.1 bits (21), Expect = 8.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 648 ggcgttcggcgccgaccagctcgag 672 ||||||||||||||||||| ||||| Sbjct: 489 ggcgttcggcgccgaccagttcgag 513
>ref|NM_001051653.1| Oryza sativa (japonica cultivar-group) Os01g0902700 (Os01g0902700) mRNA, complete cds Length = 1581 Score = 42.1 bits (21), Expect = 8.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1618 atggagtttttgtacgaccaggcgcccga 1646 |||||||| || ||||||||||||||||| Sbjct: 1303 atggagttcttctacgaccaggcgcccga 1331
>ref|NM_001051478.1| Oryza sativa (japonica cultivar-group) Os01g0872100 (Os01g0872100) mRNA, partial cds Length = 1695 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1558 tggctggtgccgcagtacgcc 1578 ||||||||||||||||||||| Sbjct: 1305 tggctggtgccgcagtacgcc 1325
>ref|NM_001051477.1| Oryza sativa (japonica cultivar-group) Os01g0872000 (Os01g0872000) mRNA, partial cds Length = 1795 Score = 42.1 bits (21), Expect = 8.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1414 ctccagcgcgccggcgtcggcatgaccat 1442 |||||||||| ||||||||||||| |||| Sbjct: 1157 ctccagcgcgtcggcgtcggcatggccat 1185 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1558 tggctggtgccgcagtacgcc 1578 ||||||||||||||||||||| Sbjct: 1298 tggctggtgccgcagtacgcc 1318
>ref|XM_510813.2| PREDICTED: Pan troglodytes class II transactivator (CIITA), mRNA Length = 7798 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1539 gttgcccatcagtgtcttctg 1559 ||||||||||||||||||||| Sbjct: 4304 gttgcccatcagtgtcttctg 4284
>emb|CT867964.5| Pig DNA sequence from clone CH242-267C2 on chromosome 7, complete sequence Length = 198222 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 324 caccctccagctgcacctgcc 344 ||||||||||||||||||||| Sbjct: 21756 caccctccagctgcacctgcc 21776
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1556 tctggctggtgccgcagtacg 1576 ||||||||||||||||||||| Sbjct: 3773948 tctggctggtgccgcagtacg 3773968
>gb|AC188038.1| Genomic sequence for Sorghum bicolor BAC clone SB_IBa82G24, complete sequence Length = 201654 Score = 42.1 bits (21), Expect = 8.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1618 atggagtttttgtacgaccaggcgcccga 1646 |||||||| || ||||||||||||||||| Sbjct: 201299 atggagttcttctacgaccaggcgcccga 201327
>gb|CP000384.1| Mycobacterium sp. MCS, complete genome Length = 5705448 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1705 ctcggcacgctgctggtgacc 1725 ||||||||||||||||||||| Sbjct: 716552 ctcggcacgctgctggtgacc 716532 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 772 gcggcggtcaccgtggtggtg 792 ||||||||||||||||||||| Sbjct: 1088094 gcggcggtcaccgtggtggtg 1088114
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 42.1 bits (21), Expect = 8.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1415 tccagcgcgccggcgtcggcatgac 1439 ||||||||||||||| ||||||||| Sbjct: 2020804 tccagcgcgccggcgccggcatgac 2020828
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1436 tgaccatcgccatgctggcga 1456 ||||||||||||||||||||| Sbjct: 26039 tgaccatcgccatgctggcga 26019
>gb|BC007430.1| Homo sapiens class II, major histocompatibility complex, transactivator, mRNA (cDNA clone IMAGE:2966593), **** WARNING: chimeric clone **** Length = 5668 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1539 gttgcccatcagtgtcttctg 1559 ||||||||||||||||||||| Sbjct: 4290 gttgcccatcagtgtcttctg 4270
>gb|BC007406.1| Homo sapiens class II, major histocompatibility complex, transactivator, mRNA (cDNA clone IMAGE:2966593), **** WARNING: chimeric clone **** Length = 5668 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1539 gttgcccatcagtgtcttctg 1559 ||||||||||||||||||||| Sbjct: 4290 gttgcccatcagtgtcttctg 4270
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1422 cgccggcgtcggcatgaccat 1442 ||||||||||||||||||||| Sbjct: 648274 cgccggcgtcggcatgaccat 648294
>ref|NM_022296.2| Rattus norvegicus xylosyltransferase II (Xylt2), mRNA gb|BC105767.1| Rattus norvegicus xylosyltransferase II, mRNA (cDNA clone MGC:124608 IMAGE:7930580), complete cds Length = 3375 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 481 ggcatggtctgcctcaccctc 501 ||||||||||||||||||||| Sbjct: 2963 ggcatggtctgcctcaccctc 2983
>gb|AF410154.1| Homo sapiens MHC2TA (MHC2TA) mRNA, complete cds, alternatively spliced Length = 5356 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1539 gttgcccatcagtgtcttctg 1559 ||||||||||||||||||||| Sbjct: 5169 gttgcccatcagtgtcttctg 5149
>ref|NM_176682.1| Drosophila melanogaster CG2930-RD, transcript variant D (CG2930), mRNA Length = 2612 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1556 tctggctggtgccgcagtacg 1576 ||||||||||||||||||||| Sbjct: 2231 tctggctggtgccgcagtacg 2251
>gb|AC142334.1| Pan troglodytes BAC clone RP43-34J11 from 7, complete sequence Length = 168008 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1832 acctcatctactacttcatat 1852 ||||||||||||||||||||| Sbjct: 152790 acctcatctactacttcatat 152810
>gb|AC023714.5| Drosophila melanogaster X BAC RP98-19D19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160100 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1556 tctggctggtgccgcagtacg 1576 ||||||||||||||||||||| Sbjct: 65299 tctggctggtgccgcagtacg 65279
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 8.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 394 ctcacgccgctcgtcggcggcctcatcgc 422 ||||||||||| |||||||||||||||| Sbjct: 162661 ctcacgccgctgatcggcggcctcatcgc 162633
>gb|AC126538.1| Homo sapiens chromosome 16 clone CTD-3225F13, complete sequence Length = 188015 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1539 gttgcccatcagtgtcttctg 1559 ||||||||||||||||||||| Sbjct: 127939 gttgcccatcagtgtcttctg 127959
>dbj|AK010802.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410141F18 product:hypothetical protein, full insert sequence Length = 1714 Score = 42.1 bits (21), Expect = 8.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 499 ctctccgccgcgctcccctcgctcc 523 |||||||||||||||||||| |||| Sbjct: 648 ctctccgccgcgctcccctccctcc 672
>gb|AC010216.8| Homo sapiens chromosome 5 clone CTC-202F10, complete sequence Length = 110753 Score = 42.1 bits (21), Expect = 8.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 812 gctgggggtgggggctcggcgtgcccacc 840 |||||||||||||||| || ||||||||| Sbjct: 15462 gctgggggtgggggcttggtgtgcccacc 15490
>emb|CT025835.2| uncultured sulfate-reducing bacterium, fosws39f7, complete sequence Length = 38676 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 451 atcaccgtcggctccatcatc 471 ||||||||||||||||||||| Sbjct: 2205 atcaccgtcggctccatcatc 2225
>emb|Z92973.1|CEY6G8 Caenorhabditis elegans YAC Y6G8, complete sequence Length = 33038 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2011 atacgatattaatattgccga 2031 ||||||||||||||||||||| Sbjct: 17643 atacgatattaatattgccga 17623
>gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, complete sequence Length = 118101 Score = 42.1 bits (21), Expect = 8.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 648 ggcgttcggcgccgaccagctcgag 672 ||||||||||||||||||| ||||| Sbjct: 74115 ggcgttcggcgccgaccagttcgag 74091
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 42.1 bits (21), Expect = 8.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1011 cgacgccggcatctccaccaccggc 1035 |||||||| |||||||||||||||| Sbjct: 90790 cgacgccgccatctccaccaccggc 90766
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 42.1 bits (21), Expect = 8.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1011 cgacgccggcatctccaccaccggc 1035 |||||||| |||||||||||||||| Sbjct: 1692 cgacgccgccatctccaccaccggc 1668
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 42.1 bits (21), Expect = 8.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1011 cgacgccggcatctccaccaccggc 1035 |||||||| |||||||||||||||| Sbjct: 286610 cgacgccgccatctccaccaccggc 286586
>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16 Length = 349746 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 449 ccatcaccgtcggctccatca 469 ||||||||||||||||||||| Sbjct: 29440 ccatcaccgtcggctccatca 29420
>dbj|AP004669.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0491F11 Length = 152274 Score = 42.1 bits (21), Expect = 8.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1414 ctccagcgcgccggcgtcggcatgaccat 1442 |||||||||| ||||||||||||| |||| Sbjct: 30752 ctccagcgcgtcggcgtcggcatggccat 30780 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1558 tggctggtgccgcagtacgcc 1578 ||||||||||||||||||||| Sbjct: 30893 tggctggtgccgcagtacgcc 30913 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1558 tggctggtgccgcagtacgcc 1578 ||||||||||||||||||||| Sbjct: 41043 tggctggtgccgcagtacgcc 41063
>dbj|AP006757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0551C06 Length = 149829 Score = 42.1 bits (21), Expect = 8.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1618 atggagtttttgtacgaccaggcgcccga 1646 |||||||| || ||||||||||||||||| Sbjct: 84528 atggagttcttctacgaccaggcgcccga 84556
>dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039A07 Length = 148892 Score = 42.1 bits (21), Expect = 8.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1414 ctccagcgcgccggcgtcggcatgaccat 1442 |||||||||| ||||||||||||| |||| Sbjct: 137697 ctccagcgcgtcggcgtcggcatggccat 137725 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1558 tggctggtgccgcagtacgcc 1578 ||||||||||||||||||||| Sbjct: 137838 tggctggtgccgcagtacgcc 137858 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1558 tggctggtgccgcagtacgcc 1578 ||||||||||||||||||||| Sbjct: 147988 tggctggtgccgcagtacgcc 148008
>gb|AC133065.3| Homo sapiens chromosome 16 clone RP11-876N24, complete sequence Length = 142215 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1539 gttgcccatcagtgtcttctg 1559 ||||||||||||||||||||| Sbjct: 104532 gttgcccatcagtgtcttctg 104512
>gb|AF201409.1| Hydroporus erythrocephalus 18S ribosomal RNA gene, partial sequence Length = 1874 Score = 42.1 bits (21), Expect = 8.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 675 gggcgcgcgccgacgccggagcgcc 699 |||||||||| |||||||||||||| Sbjct: 1456 gggcgcgcgcggacgccggagcgcc 1432
>dbj|AP003791.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065G12 Length = 165006 Score = 42.1 bits (21), Expect = 8.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1618 atggagtttttgtacgaccaggcgcccga 1646 |||||||| || ||||||||||||||||| Sbjct: 104988 atggagttcttctacgaccaggcgcccga 105016
>dbj|AP005615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0006J22 Length = 145271 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 517 tcgctccgcccgccgccgtgc 537 ||||||||||||||||||||| Sbjct: 138062 tcgctccgcccgccgccgtgc 138042
>dbj|AP005771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0069D13 Length = 157088 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 517 tcgctccgcccgccgccgtgc 537 ||||||||||||||||||||| Sbjct: 29681 tcgctccgcccgccgccgtgc 29661
>dbj|AK102239.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088C23, full insert sequence Length = 1796 Score = 42.1 bits (21), Expect = 8.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1414 ctccagcgcgccggcgtcggcatgaccat 1442 |||||||||| ||||||||||||| |||| Sbjct: 1158 ctccagcgcgtcggcgtcggcatggccat 1186 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1558 tggctggtgccgcagtacgcc 1578 ||||||||||||||||||||| Sbjct: 1299 tggctggtgccgcagtacgcc 1319
>dbj|AK099405.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001K17, full insert sequence Length = 1696 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1558 tggctggtgccgcagtacgcc 1578 ||||||||||||||||||||| Sbjct: 1306 tggctggtgccgcagtacgcc 1326
>gb|AE004994.1| Halobacterium sp. NRC-1 section 25 of 170 of the complete genome Length = 15274 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1879 ctggagacggaggtcgagcac 1899 ||||||||||||||||||||| Sbjct: 11207 ctggagacggaggtcgagcac 11187
>dbj|AB048795.1| Kitasatospora griseola genes for probable efflux protein, hypothetical protein, probable p450, diterpene cyclase-1, diterpene cyclase-2, probable p450, probable ferredoxin, complete cds Length = 8487 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 479 tcggcatggtctgcctcaccc 499 ||||||||||||||||||||| Sbjct: 1298 tcggcatggtctgcctcaccc 1318
>gb|AC153877.5| Mus musculus 6 BAC RP23-258E21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 232977 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 tcaggaccatgcccttcatcc 259 ||||||||||||||||||||| Sbjct: 65834 tcaggaccatgcccttcatcc 65814
>ref|NM_000246.2| Homo sapiens class II, major histocompatibility complex, transactivator (CIITA), mRNA Length = 4661 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1539 gttgcccatcagtgtcttctg 1559 ||||||||||||||||||||| Sbjct: 4286 gttgcccatcagtgtcttctg 4266
>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence Length = 405672 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 726 gagcttcttcaacctgtactt 746 ||||||||||||||||||||| Sbjct: 232669 gagcttcttcaacctgtactt 232649
>gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence Length = 323584 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 726 gagcttcttcaacctgtactt 746 ||||||||||||||||||||| Sbjct: 220594 gagcttcttcaacctgtactt 220574
>gb|U18259.1|HSU18259 Human clone CIITA-8 MHC class II transactivator CIITA mRNA, complete cds Length = 6672 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1539 gttgcccatcagtgtcttctg 1559 ||||||||||||||||||||| Sbjct: 4293 gttgcccatcagtgtcttctg 4273
>emb|X74301.1|HSCIITA H.sapiens mRNA for MHC class II transactivator Length = 4543 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1539 gttgcccatcagtgtcttctg 1559 ||||||||||||||||||||| Sbjct: 4272 gttgcccatcagtgtcttctg 4252
>dbj|AP003566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0008G24 Length = 152736 Score = 42.1 bits (21), Expect = 8.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1414 ctccagcgcgccggcgtcggcatgaccat 1442 |||||||||| ||||||||||||| |||| Sbjct: 68644 ctccagcgcgtcggcgtcggcatggccat 68672 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1558 tggctggtgccgcagtacgcc 1578 ||||||||||||||||||||| Sbjct: 68785 tggctggtgccgcagtacgcc 68805 Score = 42.1 bits (21), Expect = 8.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1558 tggctggtgccgcagtacgcc 1578 ||||||||||||||||||||| Sbjct: 78935 tggctggtgccgcagtacgcc 78955 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 287,894,323 Number of extensions: 16088086 Number of successful extensions: 122541 Number of sequences better than 10.0: 131 Number of HSP's gapped: 122524 Number of HSP's successfully gapped: 251 Length of query: 2095 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2072 Effective length of database: 18,503,978,556 Effective search space: 38340243568032 Effective search space used: 38340243568032 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
