ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf98d24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os10g0191000:Os10g0191000 54 2e-07
2Os07g0613900:Os07g0613900 45 8e-05
3AK120581:Os11g0701700 32 0.91
4AK101544:Os11g0701700 32 0.91
5AK072522:Os02g0565500 30 4.5
6AK066115:Os03g0301000 30 4.5
7Os01g0770100:Os01g0770100 29 5.9
8AK106029: 29 5.9
9AK109350:Os03g0637600 29 5.9
10AK105732:Os03g0637600 29 5.9
11AK068135:Os03g0637600 29 5.9
12AK109984: 29 7.7

>Os10g0191000:Os10g0191000 |
          Length = 566
 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 40/140 (28%), Positives = 56/140 (40%), Gaps = 3/140 (2%)
 Frame = +3

Query: 624  GGWGFVIQHLPGDVRGSGTGRLRHVXXXXXXXXXXXXXXXXXXXXXGMKNVEVESNYQTL 803
            GGWG V +   G       G L+++                     GM ++ VE++ Q L
Sbjct: 423  GGWGVVARDTDGCPLMMAAGNLQNLHNANQAEALACIQALKLANDMGMGHIIVETDAQAL 482

Query: 804  IKALQCSVYDRAPEGILFTEIWDFARLSFSACMFSTAPKACNNLVHALAAFGAS-QQADL 980
              AL     DR+   ++  E      ++F+       P+ CN   H LA  GAS      
Sbjct: 483  KAALLDETQDRSVNAVIIREAKFLLAMNFNVHQVMYCPRECNRAAHELAKIGASLGPRSQ 542

Query: 981  HLWLEDLPDKV--LVQRDSA 1034
             +WLE  PD V  LV  DSA
Sbjct: 543  FVWLEGFPDVVCNLVASDSA 562



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>Os07g0613900:Os07g0613900 |
          Length = 1453

 Score = 45.4 bits (106), Expect = 8e-05
 Identities = 33/114 (28%), Positives = 49/114 (42%)
 Frame = +3

Query: 576  KINCDGAFPAPEGTSGGGWGFVIQHLPGDVRGSGTGRLRHVXXXXXXXXXXXXXXXXXXX 755
            KIN DGAF     T  GGWGF I+   G V  SG G+++ +                   
Sbjct: 1342 KINTDGAFDP--FTRTGGWGFAIRDHSGKVVKSGAGKVQILMNAFHAEALACAAGIRAAS 1399

Query: 756  XXGMKNVEVESNYQTLIKALQCSVYDRAPEGILFTEIWDFARLSFSACMFSTAP 917
              GM+ V  E++   L  AL+ + +  +  G +  EI +F   +F +   S  P
Sbjct: 1400 ECGMQRVTAETDSTMLKSALEKNTFASSALGGIICEIKNFVNFAFLSFNVSYCP 1453



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>AK120581:Os11g0701700 |
          Length = 91

 Score = 32.0 bits (71), Expect = 0.91
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -3

Query: 682 PVPEPLTSPGKCCMTKPQPPPLVPSGA-GNAP 590
           P P PL+ P +  +T+P PPP  P  A G AP
Sbjct: 10  PPPPPLSLPWEAVITRPPPPPFPPDLAEGRAP 41



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>AK101544:Os11g0701700 |
          Length = 91

 Score = 32.0 bits (71), Expect = 0.91
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -3

Query: 682 PVPEPLTSPGKCCMTKPQPPPLVPSGA-GNAP 590
           P P PL+ P +  +T+P PPP  P  A G AP
Sbjct: 10  PPPPPLSLPWEAVITRPPPPPFPPDLAEGRAP 41



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>AK072522:Os02g0565500 |
          Length = 363

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
 Frame = -3

Query: 394 PRYLEVDIATITGEEAEPTAGMWIRRS----PGYGRIGSGVLNSHRLAVSREVAGGDGRE 227
           P+ + +D+  I  EE +     +  R+      YGR+ +G L+  R AV +++  G  +E
Sbjct: 46  PKPVNIDVPAIPFEELKKITSNFSDRALIGEGSYGRVYNGTLSDGRAAVIKKLDPGASQE 105

Query: 226 TE 221
           T+
Sbjct: 106 TD 107



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>AK066115:Os03g0301000 |
          Length = 206

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = -3

Query: 328 WIRRSPGYGRIGSGVLNSHRLAVSREVAGGDGRETERRPWAM 203
           W   S G GR+    L    +A +REV G   R   +RP AM
Sbjct: 158 WEGSSEGGGRLAGTALARRPMATTREVVGRRERRLRQRPVAM 199



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>Os01g0770100:Os01g0770100 |
          Length = 629

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 28/99 (28%), Positives = 37/99 (37%), Gaps = 10/99 (10%)
 Frame = -3

Query: 382 EVDIATITGEEAEPTAGMWIRRSPGY--------GRIGSGVLNSHRLAVSREVA--GGDG 233
           E  +  +    A   AG W RR  G         G +G+    S R   +   A  GG G
Sbjct: 312 EGGVRAVATSAAAAVAGGWRRREEGGRDDVRGTDGLVGARKERSSRRPSAPRCAQGGGGG 371

Query: 232 RETERRPWAM*AVYSGGAAGGPSPCLNHSSIPVLAGEMR 116
           +E  RR WA  +       GG +    HS  P  +G  R
Sbjct: 372 QEERRRLWAPTSFPPDADGGGGADSTGHS--PPRSGRKR 408



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>AK106029: |
          Length = 316

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 685 RPVPEPLTSPGKCCMTKPQPPPLVPSGAGN 596
           +P P P  +P       P P PL P+GA N
Sbjct: 203 KPAPAPAPAPAPAPAPAPAPLPLAPAGATN 232



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>AK109350:Os03g0637600 |
          Length = 394

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -3

Query: 694 CRRRPVPEPLTSPGKCCMTKPQPPPLVP 611
           C  +P+P P  SP       P PPP +P
Sbjct: 27  CLSQPLPSPSPSPSPSPSASPAPPPSLP 54



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>AK105732:Os03g0637600 |
          Length = 394

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -3

Query: 694 CRRRPVPEPLTSPGKCCMTKPQPPPLVP 611
           C  +P+P P  SP       P PPP +P
Sbjct: 27  CLSQPLPSPSPSPSPSPSASPAPPPSLP 54



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>AK068135:Os03g0637600 |
          Length = 394

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -3

Query: 694 CRRRPVPEPLTSPGKCCMTKPQPPPLVP 611
           C  +P+P P  SP       P PPP +P
Sbjct: 27  CLSQPLPSPSPSPSPSPSASPAPPPSLP 54



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>AK109984: |
          Length = 448

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
 Frame = -1

Query: 279 TPTVWPFPERSPVAMGVKLSA-----DRGRCR 199
           T T  P P+R+PV +GV L A     DRGR R
Sbjct: 98  TQTTHPLPQRAPVDLGVDLFAPNAPLDRGRNR 129


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 40,067,466
Number of extensions: 1049960
Number of successful extensions: 4136
Number of sequences better than 10.0: 12
Number of HSP's gapped: 4097
Number of HSP's successfully gapped: 12
Length of query: 407
Length of database: 15,399,855
Length adjustment: 103
Effective length of query: 304
Effective length of database: 11,275,632
Effective search space: 3427792128
Effective search space used: 3427792128
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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