Clone Name | FLbaf98d24 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | Os10g0191000:Os10g0191000 | 54 | 2e-07 | 2 | Os07g0613900:Os07g0613900 | 45 | 8e-05 | 3 | AK120581:Os11g0701700 | 32 | 0.91 | 4 | AK101544:Os11g0701700 | 32 | 0.91 | 5 | AK072522:Os02g0565500 | 30 | 4.5 | 6 | AK066115:Os03g0301000 | 30 | 4.5 | 7 | Os01g0770100:Os01g0770100 | 29 | 5.9 | 8 | AK106029: | 29 | 5.9 | 9 | AK109350:Os03g0637600 | 29 | 5.9 | 10 | AK105732:Os03g0637600 | 29 | 5.9 | 11 | AK068135:Os03g0637600 | 29 | 5.9 | 12 | AK109984: | 29 | 7.7 |
---|
>Os10g0191000:Os10g0191000 | Length = 566 Score = 53.9 bits (128), Expect = 2e-07 Identities = 40/140 (28%), Positives = 56/140 (40%), Gaps = 3/140 (2%) Frame = +3 Query: 624 GGWGFVIQHLPGDVRGSGTGRLRHVXXXXXXXXXXXXXXXXXXXXXGMKNVEVESNYQTL 803 GGWG V + G G L+++ GM ++ VE++ Q L Sbjct: 423 GGWGVVARDTDGCPLMMAAGNLQNLHNANQAEALACIQALKLANDMGMGHIIVETDAQAL 482 Query: 804 IKALQCSVYDRAPEGILFTEIWDFARLSFSACMFSTAPKACNNLVHALAAFGAS-QQADL 980 AL DR+ ++ E ++F+ P+ CN H LA GAS Sbjct: 483 KAALLDETQDRSVNAVIIREAKFLLAMNFNVHQVMYCPRECNRAAHELAKIGASLGPRSQ 542 Query: 981 HLWLEDLPDKV--LVQRDSA 1034 +WLE PD V LV DSA Sbjct: 543 FVWLEGFPDVVCNLVASDSA 562
>Os07g0613900:Os07g0613900 | Length = 1453 Score = 45.4 bits (106), Expect = 8e-05 Identities = 33/114 (28%), Positives = 49/114 (42%) Frame = +3 Query: 576 KINCDGAFPAPEGTSGGGWGFVIQHLPGDVRGSGTGRLRHVXXXXXXXXXXXXXXXXXXX 755 KIN DGAF T GGWGF I+ G V SG G+++ + Sbjct: 1342 KINTDGAFDP--FTRTGGWGFAIRDHSGKVVKSGAGKVQILMNAFHAEALACAAGIRAAS 1399 Query: 756 XXGMKNVEVESNYQTLIKALQCSVYDRAPEGILFTEIWDFARLSFSACMFSTAP 917 GM+ V E++ L AL+ + + + G + EI +F +F + S P Sbjct: 1400 ECGMQRVTAETDSTMLKSALEKNTFASSALGGIICEIKNFVNFAFLSFNVSYCP 1453
>AK120581:Os11g0701700 | Length = 91 Score = 32.0 bits (71), Expect = 0.91 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = -3 Query: 682 PVPEPLTSPGKCCMTKPQPPPLVPSGA-GNAP 590 P P PL+ P + +T+P PPP P A G AP Sbjct: 10 PPPPPLSLPWEAVITRPPPPPFPPDLAEGRAP 41
>AK101544:Os11g0701700 | Length = 91 Score = 32.0 bits (71), Expect = 0.91 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = -3 Query: 682 PVPEPLTSPGKCCMTKPQPPPLVPSGA-GNAP 590 P P PL+ P + +T+P PPP P A G AP Sbjct: 10 PPPPPLSLPWEAVITRPPPPPFPPDLAEGRAP 41
>AK072522:Os02g0565500 | Length = 363 Score = 29.6 bits (65), Expect = 4.5 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 4/62 (6%) Frame = -3 Query: 394 PRYLEVDIATITGEEAEPTAGMWIRRS----PGYGRIGSGVLNSHRLAVSREVAGGDGRE 227 P+ + +D+ I EE + + R+ YGR+ +G L+ R AV +++ G +E Sbjct: 46 PKPVNIDVPAIPFEELKKITSNFSDRALIGEGSYGRVYNGTLSDGRAAVIKKLDPGASQE 105 Query: 226 TE 221 T+ Sbjct: 106 TD 107
>AK066115:Os03g0301000 | Length = 206 Score = 29.6 bits (65), Expect = 4.5 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = -3 Query: 328 WIRRSPGYGRIGSGVLNSHRLAVSREVAGGDGRETERRPWAM 203 W S G GR+ L +A +REV G R +RP AM Sbjct: 158 WEGSSEGGGRLAGTALARRPMATTREVVGRRERRLRQRPVAM 199
>Os01g0770100:Os01g0770100 | Length = 629 Score = 29.3 bits (64), Expect = 5.9 Identities = 28/99 (28%), Positives = 37/99 (37%), Gaps = 10/99 (10%) Frame = -3 Query: 382 EVDIATITGEEAEPTAGMWIRRSPGY--------GRIGSGVLNSHRLAVSREVA--GGDG 233 E + + A AG W RR G G +G+ S R + A GG G Sbjct: 312 EGGVRAVATSAAAAVAGGWRRREEGGRDDVRGTDGLVGARKERSSRRPSAPRCAQGGGGG 371 Query: 232 RETERRPWAM*AVYSGGAAGGPSPCLNHSSIPVLAGEMR 116 +E RR WA + GG + HS P +G R Sbjct: 372 QEERRRLWAPTSFPPDADGGGGADSTGHS--PPRSGRKR 408
>AK106029: | Length = 316 Score = 29.3 bits (64), Expect = 5.9 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = -3 Query: 685 RPVPEPLTSPGKCCMTKPQPPPLVPSGAGN 596 +P P P +P P P PL P+GA N Sbjct: 203 KPAPAPAPAPAPAPAPAPAPLPLAPAGATN 232
>AK109350:Os03g0637600 | Length = 394 Score = 29.3 bits (64), Expect = 5.9 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = -3 Query: 694 CRRRPVPEPLTSPGKCCMTKPQPPPLVP 611 C +P+P P SP P PPP +P Sbjct: 27 CLSQPLPSPSPSPSPSPSASPAPPPSLP 54
>AK105732:Os03g0637600 | Length = 394 Score = 29.3 bits (64), Expect = 5.9 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = -3 Query: 694 CRRRPVPEPLTSPGKCCMTKPQPPPLVP 611 C +P+P P SP P PPP +P Sbjct: 27 CLSQPLPSPSPSPSPSPSASPAPPPSLP 54
>AK068135:Os03g0637600 | Length = 394 Score = 29.3 bits (64), Expect = 5.9 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = -3 Query: 694 CRRRPVPEPLTSPGKCCMTKPQPPPLVP 611 C +P+P P SP P PPP +P Sbjct: 27 CLSQPLPSPSPSPSPSPSASPAPPPSLP 54
>AK109984: | Length = 448 Score = 28.9 bits (63), Expect = 7.7 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 5/32 (15%) Frame = -1 Query: 279 TPTVWPFPERSPVAMGVKLSA-----DRGRCR 199 T T P P+R+PV +GV L A DRGR R Sbjct: 98 TQTTHPLPQRAPVDLGVDLFAPNAPLDRGRNR 129 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 40,067,466 Number of extensions: 1049960 Number of successful extensions: 4136 Number of sequences better than 10.0: 12 Number of HSP's gapped: 4097 Number of HSP's successfully gapped: 12 Length of query: 407 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 304 Effective length of database: 11,275,632 Effective search space: 3427792128 Effective search space used: 3427792128 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)