Clone Name | FLbaf98d24 |
---|---|
Clone Library Name | barley_pub |
>gb|AY210453.1| Alcyonidium diaphanum 28S ribosomal RNA gene, partial sequence Length = 3390 Score = 50.1 bits (25), Expect = 0.019 Identities = 25/25 (100%) Strand = Plus / Plus Query: 166 acgggccgccggcggcgccgcccga 190 ||||||||||||||||||||||||| Sbjct: 481 acgggccgccggcggcgccgcccga 505
>gb|AC131954.1| Homo sapiens BAC clone RP11-761I13 from 2, complete sequence Length = 100732 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1177 tattcaaatttttatggtcattttaaa 1203 |||||||||||||||||| |||||||| Sbjct: 96814 tattcaaatttttatggttattttaaa 96840
>gb|AC101922.12| Mus musculus chromosome 3, clone RP24-182A8, complete sequence Length = 173400 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1186 ttttatggtcattttaaagttg 1207 |||||||||||||||||||||| Sbjct: 146840 ttttatggtcattttaaagttg 146819
>gb|AC024697.6| Homo sapiens BAC clone RP11-9D6 from 2, complete sequence Length = 149050 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1184 atttttatggtcattttaaagt 1205 |||||||||||||||||||||| Sbjct: 115584 atttttatggtcattttaaagt 115563
>gb|AC099584.8| Mus musculus chromosome 3, clone RP23-1A12, complete sequence Length = 217366 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1186 ttttatggtcattttaaagttg 1207 |||||||||||||||||||||| Sbjct: 168513 ttttatggtcattttaaagttg 168534
>ref|XM_363935.1| Magnaporthe grisea 70-15 predicted protein (MG01861.4) partial mRNA Length = 522 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 cgggccgccggcggcgccgcc 187 ||||||||||||||||||||| Sbjct: 426 cgggccgccggcggcgccgcc 406
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 214 gtcggcgctcagtttcacgcccatcgcca 242 |||| ||| |||||||||||||||||||| Sbjct: 1323235 gtcgtcgcccagtttcacgcccatcgcca 1323207
>gb|AC103371.9| Mus musculus chromosome 5, clone RP24-399A15, complete sequence Length = 122682 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 taggaagaagcgaggagggac 75 ||||||||||||||||||||| Sbjct: 51012 taggaagaagcgaggagggac 50992
>dbj|AK047834.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130002P21 product:unclassifiable, full insert sequence Length = 2160 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 taggaagaagcgaggagggac 75 ||||||||||||||||||||| Sbjct: 387 taggaagaagcgaggagggac 367
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 ccgccggcggcgccgcccgag 191 ||||||||||||||||||||| Sbjct: 1600015 ccgccggcggcgccgcccgag 1599995
>emb|BX897693.12| Zebrafish DNA sequence from clone CH211-147C1 in linkage group 20, complete sequence Length = 173818 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1174 aaatattcaaatttttatggt 1194 ||||||||||||||||||||| Sbjct: 62131 aaatattcaaatttttatggt 62111
>gb|AC007969.3| Homo sapiens BAC clone RP11-471A5 from 2, complete sequence Length = 162760 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1170 tctcaaatattcaaattttta 1190 ||||||||||||||||||||| Sbjct: 70175 tctcaaatattcaaattttta 70155
>emb|AL672218.9| Mouse DNA sequence from clone RP24-BM212H6 on chromosome 11, complete sequence Length = 196938 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 taggaagaagcgaggagggac 75 ||||||||||||||||||||| Sbjct: 24201 taggaagaagcgaggagggac 24181 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 205,556,102 Number of extensions: 10642508 Number of successful extensions: 228203 Number of sequences better than 10.0: 13 Number of HSP's gapped: 228203 Number of HSP's successfully gapped: 13 Length of query: 1221 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1198 Effective length of database: 18,503,978,556 Effective search space: 22167766310088 Effective search space used: 22167766310088 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)