ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf96b03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q255P5:LPXB_CHLFF Lipid-A-disaccharide synthase - Chlamydophila ... 35 0.44
2P27780:CUP8_DROME Pupal cuticle protein Edg-84A precursor - Dros... 35 0.76
3Q5NVB9:ZDH13_PONPY Probable palmitoyltransferase ZDHHC13 - Pongo... 33 1.7
4Q49409:Y277_MYCGE Uncharacterized protein MG277 - Mycoplasma gen... 33 1.7
5Q4R690:ZDH13_MACFA Probable palmitoyltransferase ZDHHC13 - Macac... 33 2.2
6Q8IUH4:ZDH13_HUMAN Probable palmitoyltransferase ZDHHC13 - Homo ... 33 2.2
7Q9CWU2:ZDH13_MOUSE Probable palmitoyltransferase ZDHHC13 - Mus m... 33 2.9
8P79920:NDF4_XENLA Neurogenic differentiation factor 4 - Xenopus ... 33 2.9
9Q3ECH0:FB75_ARATH F-box protein At1g67130 - Arabidopsis thaliana... 32 6.4

>Q255P5:LPXB_CHLFF Lipid-A-disaccharide synthase - Chlamydophila felis (strain|
           Fe/C-56)
          Length = 625
 Score = 35.4 bits (80), Expect = 0.44
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 20/74 (27%)
 Frame = +3

Query: 258 MTGCVVLFPVAFTFFITW---------------WFVQFVDGFFSPLY-----AKIGVDIF 377
           + GC+ LF  +  FFI W               W V F+ GF + LY       + +  +
Sbjct: 142 IAGCIGLFTFSSRFFIQWCHLEINNRSTLPALFWLVSFIGGFLAFLYFIRTGDPVNIISY 201

Query: 378 GLGFLTSLAFIFLV 419
           G G L SLA + ++
Sbjct: 202 GCGLLPSLANLLII 215



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>P27780:CUP8_DROME Pupal cuticle protein Edg-84A precursor - Drosophila melanogaster|
            (Fruit fly)
          Length = 188

 Score = 34.7 bits (78), Expect = 0.76
 Identities = 23/74 (31%), Positives = 31/74 (41%)
 Frame = -3

Query: 1087 TSCTPAVHRS*HFGPVSKHREKQHVPYNSIPGHRYDASVQLVHHVPVSNLDILHVTNEQQ 908
            +  +  VHRS  F PV  H    HV +++ P H +     + HHVPV    + H      
Sbjct: 131  SQASAVVHRS--FAPVVHHAPVTHVVHHAAPAHSF-----VSHHVPVLKTTVHH------ 177

Query: 907  WSPIHSFAIHPHVI 866
                   A HPH I
Sbjct: 178  -------AHHPHAI 184



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>Q5NVB9:ZDH13_PONPY Probable palmitoyltransferase ZDHHC13 - Pongo pygmaeus (Orangutan)|
          Length = 622

 Score = 33.5 bits (75), Expect = 1.7
 Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
 Frame = +3

Query: 276 LFPVAFTFFITWWFVQFVDGFFSPLYAKIGVDIFGLGFLTSLAFIFLVG-----IFVSSW 440
           LF +     IT W V ++  F S  +   G  +  L FLTSL   FLVG        +++
Sbjct: 292 LFLLLMLSVITMWAVGYILDFNSDSWLLKGCLLVTLFFLTSLFPRFLVGYKNLVYLPTAF 351

Query: 441 VGSTVFWV-GEWFIKKMP 491
           + S+VFW+   WFI   P
Sbjct: 352 LLSSVFWIFMTWFILFFP 369



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>Q49409:Y277_MYCGE Uncharacterized protein MG277 - Mycoplasma genitalium|
          Length = 970

 Score = 33.5 bits (75), Expect = 1.7
 Identities = 20/94 (21%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
 Frame = +3

Query: 243  VSRKFMTGCVVLFPVAFTFFITWWFVQFVDGFFSPLYAKIGVDIFGLGFLTSLAFIFLVG 422
            VS  ++  C++ + VA+       F+    G F+ +Y    +       +  + F++L  
Sbjct: 772  VSLLYLAYCLIRYGVAYCLSYLVSFILLCSGLFAVMYLTNYLFSIDQSTIQLITFVYLFW 831

Query: 423  IFVSSWVGSTVFWV-GEWF---IKKMPFVKHIYS 512
            +F ++ V  T  W    WF   +K   F+K++++
Sbjct: 832  LFFAAKVSQTTTWTYFYWFKRSLKDKVFIKNLFN 865



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>Q4R690:ZDH13_MACFA Probable palmitoyltransferase ZDHHC13 - Macaca fascicularis (Crab|
           eating macaque) (Cynomolgus monkey)
          Length = 622

 Score = 33.1 bits (74), Expect = 2.2
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
 Frame = +3

Query: 276 LFPVAFTFFITWWFVQFVDGFFSPLYAKIGVDIFGLGFLTSLAFIFLVG-----IFVSSW 440
           LF +     IT W V ++  F S  +   G  +  L FLTSL   FLVG        +++
Sbjct: 292 LFLLLMLSVITMWAVGYILDFNSDSWLLKGCLLVTLFFLTSLFPRFLVGYKNLIYLPTAF 351

Query: 441 VGSTVFWV-GEWFIKKMP 491
           + S++FW+   WFI   P
Sbjct: 352 LLSSIFWIFMTWFILFFP 369



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>Q8IUH4:ZDH13_HUMAN Probable palmitoyltransferase ZDHHC13 - Homo sapiens (Human)|
          Length = 622

 Score = 33.1 bits (74), Expect = 2.2
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
 Frame = +3

Query: 276 LFPVAFTFFITWWFVQFVDGFFSPLYAKIGVDIFGLGFLTSLAFIFLVG-----IFVSSW 440
           LF +     IT W + ++  F S  +   G  +  L FLTSL   FLVG        +++
Sbjct: 292 LFLLLMLSVITMWAIGYILDFNSDSWLLKGCLLVTLFFLTSLFPRFLVGYKNLVYLPTAF 351

Query: 441 VGSTVFWV-GEWFIKKMP 491
           + S+VFW+   WFI   P
Sbjct: 352 LLSSVFWIFMTWFILFFP 369



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>Q9CWU2:ZDH13_MOUSE Probable palmitoyltransferase ZDHHC13 - Mus musculus (Mouse)|
          Length = 622

 Score = 32.7 bits (73), Expect = 2.9
 Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
 Frame = +3

Query: 276 LFPVAFTFFITWWFVQFVDGFFSPLYAKIGVDIFGLGFLTSLAFIFLVG-----IFVSSW 440
           LF +     IT W V ++  F S  +   G  +  L FLTSL   FLVG        + +
Sbjct: 292 LFLLLILSMITLWAVGYILDFNSDSWLLKGCLLVALFFLTSLFPRFLVGYKNLVYLPTVF 351

Query: 441 VGSTVFWV-GEWFIKKMP 491
           + S++FW+   WFI   P
Sbjct: 352 LLSSIFWIFMTWFILFFP 369



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>P79920:NDF4_XENLA Neurogenic differentiation factor 4 - Xenopus laevis (African clawed|
            frog)
          Length = 315

 Score = 32.7 bits (73), Expect = 2.9
 Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -3

Query: 1042 VSKHREKQHVPYNSIPGHRYDASVQLVHHVPVSNLDILHV-TNEQQWSPIHSFAIHPHVI 866
            + KH EK H+  +S+ GH Y+     +   P  N+D+ H+      + P+   ++  H +
Sbjct: 174  LDKHEEKSHICDSSLTGHTYNYQSPGLPSPPYGNIDVHHLHLKPSSFKPVMDPSVVTHTL 233



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>Q3ECH0:FB75_ARATH F-box protein At1g67130 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 155

 Score = 31.6 bits (70), Expect = 6.4
 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
 Frame = +3

Query: 465 GEWFIKKMPFVKHIYSASKQVSTAISPDQNTTAFKEVAIIRHPRVG-EYAFGFITSTVVL 641
           GEW     P  K+ Y  S   S  ++ D +    K   I +H   G  YAFG I    V 
Sbjct: 68  GEWSFYSSPQPKNPYEKS---SLEVAADFH---MKLSEIKQHQHHGTSYAFGLIYLRTVW 121

Query: 642 QTDKGDEELCSVYVPTNHLYIGDIFLLNSEEI 737
            + +G+ E+C +  P+   Y+    L   E +
Sbjct: 122 MSKEGNYEVCVICKPSTGQYMRSYHLNRQESL 153


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 180,101,737
Number of extensions: 4053415
Number of successful extensions: 11305
Number of sequences better than 10.0: 9
Number of HSP's gapped: 11275
Number of HSP's successfully gapped: 9
Length of query: 382
Length of database: 100,686,439
Length adjustment: 115
Effective length of query: 267
Effective length of database: 69,142,514
Effective search space: 18461051238
Effective search space used: 18461051238
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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